Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 9093 cluster # 9093       Sequences # 6       consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9093#0 length = 1933 sequences # 3  
 consensus_9093#1 length = 456 sequences # 2  
consensus_9093#2 length = 433 sequences # 1  
consensusID : consensus_9093#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1933
fasta sequence 
                              [GCTTTCTCTTTCCCTCGAAAACCAAAACCAAAACCAAATCGCGGGAAAGCGGGCGCGGCGGAGATCGCCGCCGGTCGCCGGAGATGTCGTCGGTGGTCAACAAGCTCACTAACGCCGCCGAGAGGGAGTCGTCGGAGGCGGAAACCCTTATCGCGGAGATTCGCAAGGCGATCGGCGAAATGAAGTCCATCGCCGTCGATTACGAGAGGGAGAACAAGTCCGACAAGGTGAAGCAGCTTGAGGCGGCGGCGCTGGAACTGGTTGCTTCGTGCGAAGATTGCACGTGCTACGCCGACGCGATCCGGAAGGTGCCTGGGGCGTACCAGCCATCTAATCAGGTGCGGACTCTGGTAGCCGCGATGATTATTTTTTTGGTTTCAGGGGCTTATTCGAATTGTATTGGAGGAATTTCGGCTAAATGGTTATTTGTTGTTTTGGTATTGATCACTGAATTTGTGTCAAGATGACGGATTTCGAAAAGCTGATCGAGGCTGAGGTTAACAAGGTCAAGGGGAACTCATCAACATCAGTAGAGAACCATCTGCTCATTCGGCAGTTCAGAGAGGCAGTTTGGAATGTTCACCATGCTGGCCAACCAATGCCTGGTGATGAACAGGAGGATGTTCTTATGACCAGTACCCAAACTAGCATCTTAAATGTCACGTGCCCATTAACTGGGAAGCCTGTAATTCAATTGACAGAGCCAGTTCGGTGGTAAGTGTTAAGCAGTTAAACTGTTAAGGCATGGTTTTGTTTTGTAACTCTAGGAAATTTTTATTATGATATGTTACATATGCTAGATAGTTTCCTTCATGGTTGTTCAAAGAACACATACTCTCATTTTGTTTTTAAGCACAACTTAATGTCCCAAAAAATATCCATCATTAATCTGATTTCACCTGCTAAAGACCAAGTTTTTGTTGGCACAAATAACATGTCGCAAAGCCTTAGGATTATGTTTCTCCAATTTTCTTTTGCTGCCCAAGTTGAGATCATCAGGATCTGTTTCCTTCTCCATATGGTTTGCATCTTGCGGTAACAATGGCTTGTCTTTCTGTGAAAATTCCATGCAGTAGAACAAGTTTGCTGTTGTCACTGAATAATCATCATTGTGTTCAAAGTATAATAGTGTATAGCTTTCTGGGGGCAGAAATAGTGCGGTTTCTACCAGTACAATCCTTTCAGCCAATTTGACTATTAGGCATGATTCAAACTAATCATTCCCCTGTATGTAAGGTCTTTCTACAGTTTTACTATTCACATAATTGAATTCAAATCGGAAACTCCTACTACTTAATTTGCTTATTTTTCTCAGTCAAATGGATTTCTCCTAAGTTGTTGCATGTAGAAAGCAGTGTGAACATATATTTGCAGATATTCAGTTTTTGCGTTGAACTCAAGGCTATTTGTGTTGTTCAGTGCGGATTGTAGGCACATATATGAAAAAGTTCCAATTATGCATTACATAAGAAACCAAAAACCTCCGAAGTGCCCTATCGCAGGTTGCCCAAGAGTCTTACAAGTAGGAAGGGTTACCTGTGATTCCCTCCTCCAGGTTGAAATCGATGAATTACGCTCGTCAGGGCCTTCTGCTCCAGACGCTGAAAACATAGAGGATTTAACTGACGACGAGGATGACAGCAATGAATGAAGCTCTAGAAAATGACTGCCCTTTTGGATAATTATTGTAGCTAGGGACAAATTTAAACTTTTGCTGTTGTATTTGGTATGTTTTATGGGGAATGTGGTTGCTACGTCAGTCTGATCATCTGGCCCTGCTTAGCATCTGTTGATTCTGTTCCCCTCTAACCATTATTTGCACTACTTGTAGCCAATGAAACATGGGCAGCTCCCACGGCAAGATGTGAGTAAAGGTCCAATATTGTATCTGTCTCTCTCAAATCTCATATATTCAGTGCTGGAGAAACAAAAA]

[+] EMBL AK121924             [GCTTTCTCTTTCCCTCGAAAACCAAAACCAAAACCAAATCGCGGGAAAGCGGGCGCGGCGGAGATCGCCGCCGGTCGCCGGAGATGTCGTCGGTGGTCAACAAGCTCACTAACGCCGCCGAGAGGGAGTCGTCGGAGGCGGAAACCCTTATCGCGGAGATTCGCAAGGCGATCGGCGAAATGAAGTCCATCGCCGTCGATTACGAGAGGGAGAACAAGTCCGACAAGGTGAAGCAGCTTGAGGCGGCGGCGCTGGAACTGGTTGCTTCGTGCGAAGATTGCACGTGCTACGCCGACGCGATCCGGAAGGTGCCTGGGGCGTACCAGCCATCTAATCAGGTGCGGACTCTGGTAGCCGCGATGATTATTTTTTTGGTTTCAGGGGCTTATTCGAATTGTATTGGAGGAATTTCGGCTAAATGGTTATTTGTTGTTTTGGTATTGATCACTGAATTTGTGTCAAGATGACGGATTTCGAAAAGCTGATCGAGGCTGAGGTTAACAAGGTCAAGGGGAACTCATCAACATCAGTAGAGAACCATCTGCTCATTCGGCAGTTCAGAGAGGCAGTTTGGAATGTTCACCATGCTGGCCAACCAATGCCTGGTGATGAACAGGAGGATGTTCTTATGACCAGTACCCAAACTAGCATCTTAAATGTCACGTGCCCATTAACTGGGAAGCCTGTAATTCAATTGACAGAGCCAGTTCGGTGGTAAGTGTTAAGCAGTTAAACTGTTAAGGCATGGTTTTGTTTTGTAACTCTAGGAAATTTTTATTATGATATGTTACATATGCTAGATAGTTTCCTTCATGGTTGTTCAAAGAACACATACTCTCATTTTGTTTTTAAGCACAACTTAATGTCCCAAAAAATATCCATCATTAATCTGATTTCACCTGCTAAAGACCAAGTTTTTGTTGGCACAAATAACATGTCGCAAAGCCTTAGGATTATGTTTCTCCAATTTTCTTTTGCTGCCCAAGTTGAGATCATCAGGATCTGTTTCCTTCTCCATATGGTTTGCATCTTGCGGTAACAATGGCTTGTCTTTCTGTGAAAATTCCATGCAGTAGAACAAGTTTGCTGTTGTCACTGAATAATCATCATTGTGTTCAAAGTATAATAGTGTATAGCTTTCTGGGGGCAGAAATAGTGCGGTTTCTACCAGTACAATCCTTTCAGCCAATTTGACTATTAGGCATGATTCAAACTAATCATTCCCCTGTATGTAAGGTCTTTCTACAGTTTTACTATTCACATAATTGAATTCAAATCGGAAACTCCTACTACTTAATTTGCTTATTTTTCTCAGTCAAATGGATTTCTCCTAAGTTGTTGCATGTAGAAAGCAGTGTGAACATATATTTGCAGATATTCAGTTTTTGCGTTGAACTCAAGGCTATTTGTGTTGTTCAGTGCGGATTGTAGGCACATATATGAAAAAGTTCCAATTATGCATTACATAAGAAACCAAAAACCTCCGAAGTGCCCTATCGCAGGTTGCCCAAGAGTCTTACAAGTAGGAAGGGTTACCTGTGATTCCCTCCTCCAGGTTGAAATCGATGAATTACGCTCGTCAGGGCCTTCTGCTCCAGACGCTGAAAACATAGAGGATTTAACTGACGACGAGGATGACAGCAATGAATGAAGCTCTAGAAAATGACTGCCCTTTTGGATAATTATTGTAGCTAGGGACAAATTTAAACTTTTGCTGTTGTATTTGGTATGTTTTATGGGGAATGTGGTTGCTACGTCAGTCTGATCATCTGGCCCTGCTTAGCATCTGTTGATTCTGTTCCCCTCTAACCATTATTTGCACTACTTGTAGCCAATGAAACATGGGCAGCTCCCACGGCAAGATGTGAGTAAAGGTCCAATAT                                                  ]
[-] EMBL CB685826             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 CTCCAATTTTCTTTTGCTGCCCAAGTTGAGATCATCAGGATCTGTTTCCTTCTCCATATGGTTTGCATCTTGCGGTAACAATGGCTTGTCTTTCTGTGAAAATTCCATGCAGTAGAACAAGTTTGCTGTTGTCACTGAATAATCATCATTGTGTTCAAAGTATAATAGTGTATAGCTTTCTGGGGGCAGAAATAGTGCGGTTTCTACCAGTACAATCCTTTCAGCCAATTTGATTATTAGGCATGATTCAAACTAATCATTCCCCTGTATGTAAGGTCTTTCTACAGTTTTACTATTCACATAATTGAATTCAAATCGGAAACTCCTACTACTTAATTTGCTTATTTTTCTCAGTCAAATGGATTTCTCCTAAGTTGTTGCATGTAGAAAGCAGTGTGAACATATATTTGCAGATATTCAGTTTTTGCGTTGAACTCAAGGCTATTTGTGTTGTTCAGTGCGGATTGTAGGCACATATATGAAAAAGTTCCAATTATGCATTACATAAGAACCCAAAAACCTCTGAAGTGCCCTATCGCAGGTTGCCCAAGAGTCTTACAAGTAGGAAGGGTTACCTGTGATTCCCTCCTCCAGGTTGAAATAGATGAATTACGCTCGTCAGGGCCTTCTGCTCCAGACGCTGAAACCATAGAGGATTTATCTGACGACGAGGATGACAGCAATGAATGAAGCTCTAGAAAATGACTGCCCTTTTGGATAATTATTGTAGCTAGGGACAAATTTAAACTTTTGCTGTTGTGGTTGGTATGTTTTATGGGGAATGTGGTTGCTACGT                                                                                                                                                                                ]
[+] EMBL AU085777             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   tnACTGACGACGAGGATGACAGCAATGAATGAAGCTCTAGAAAATGACTGCCCTTTTGGATAATTATTGTAGCTAGGGACAAATTTAAACTTTTGCTGTTGTATTTGGTATGTTTTATGGGGAATGTGGTTGCTACGTCAGTCTGATCATCTGGCCCTGCTTAGCATCTGTTGATTCTGTTCCCCTCTAACCATTATTTGCACTACTTGTAGCCAATGAAACATGGGCAGCTCCCACGGCAAGATGTGAGTAAAGGTCCAATATTGTATCTGTCTCTCTCAAATCTCATATATTCAGTGCTGGAGAAACAAAAA]




>consensus_9093#0
GCTTTCTCTTTCCCTCGAAAACCAAAACCAAAACCAAATCGCGGGAAAGCGGGCGCGGCG
GAGATCGCCGCCGGTCGCCGGAGATGTCGTCGGTGGTCAACAAGCTCACTAACGCCGCCG
AGAGGGAGTCGTCGGAGGCGGAAACCCTTATCGCGGAGATTCGCAAGGCGATCGGCGAAA
TGAAGTCCATCGCCGTCGATTACGAGAGGGAGAACAAGTCCGACAAGGTGAAGCAGCTTG
AGGCGGCGGCGCTGGAACTGGTTGCTTCGTGCGAAGATTGCACGTGCTACGCCGACGCGA
TCCGGAAGGTGCCTGGGGCGTACCAGCCATCTAATCAGGTGCGGACTCTGGTAGCCGCGA
TGATTATTTTTTTGGTTTCAGGGGCTTATTCGAATTGTATTGGAGGAATTTCGGCTAAAT
GGTTATTTGTTGTTTTGGTATTGATCACTGAATTTGTGTCAAGATGACGGATTTCGAAAA
GCTGATCGAGGCTGAGGTTAACAAGGTCAAGGGGAACTCATCAACATCAGTAGAGAACCA
TCTGCTCATTCGGCAGTTCAGAGAGGCAGTTTGGAATGTTCACCATGCTGGCCAACCAAT
GCCTGGTGATGAACAGGAGGATGTTCTTATGACCAGTACCCAAACTAGCATCTTAAATGT
CACGTGCCCATTAACTGGGAAGCCTGTAATTCAATTGACAGAGCCAGTTCGGTGGTAAGT
GTTAAGCAGTTAAACTGTTAAGGCATGGTTTTGTTTTGTAACTCTAGGAAATTTTTATTA
TGATATGTTACATATGCTAGATAGTTTCCTTCATGGTTGTTCAAAGAACACATACTCTCA
TTTTGTTTTTAAGCACAACTTAATGTCCCAAAAAATATCCATCATTAATCTGATTTCACC
TGCTAAAGACCAAGTTTTTGTTGGCACAAATAACATGTCGCAAAGCCTTAGGATTATGTT
TCTCCAATTTTCTTTTGCTGCCCAAGTTGAGATCATCAGGATCTGTTTCCTTCTCCATAT
GGTTTGCATCTTGCGGTAACAATGGCTTGTCTTTCTGTGAAAATTCCATGCAGTAGAACA
AGTTTGCTGTTGTCACTGAATAATCATCATTGTGTTCAAAGTATAATAGTGTATAGCTTT
CTGGGGGCAGAAATAGTGCGGTTTCTACCAGTACAATCCTTTCAGCCAATTTGACTATTA
GGCATGATTCAAACTAATCATTCCCCTGTATGTAAGGTCTTTCTACAGTTTTACTATTCA
CATAATTGAATTCAAATCGGAAACTCCTACTACTTAATTTGCTTATTTTTCTCAGTCAAA
TGGATTTCTCCTAAGTTGTTGCATGTAGAAAGCAGTGTGAACATATATTTGCAGATATTC
AGTTTTTGCGTTGAACTCAAGGCTATTTGTGTTGTTCAGTGCGGATTGTAGGCACATATA
TGAAAAAGTTCCAATTATGCATTACATAAGAAACCAAAAACCTCCGAAGTGCCCTATCGC
AGGTTGCCCAAGAGTCTTACAAGTAGGAAGGGTTACCTGTGATTCCCTCCTCCAGGTTGA
AATCGATGAATTACGCTCGTCAGGGCCTTCTGCTCCAGACGCTGAAAACATAGAGGATTT
AACTGACGACGAGGATGACAGCAATGAATGAAGCTCTAGAAAATGACTGCCCTTTTGGAT
AATTATTGTAGCTAGGGACAAATTTAAACTTTTGCTGTTGTATTTGGTATGTTTTATGGG
GAATGTGGTTGCTACGTCAGTCTGATCATCTGGCCCTGCTTAGCATCTGTTGATTCTGTT
CCCCTCTAACCATTATTTGCACTACTTGTAGCCAATGAAACATGGGCAGCTCCCACGGCA
AGATGTGAGTAAAGGTCCAATATTGTATCTGTCTCTCTCAAATCTCATATATTCAGTGCT
GGAGAAACAAAAA

consensusID : consensus_9093#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 456
fasta sequence 
                              [CATTGTTTATTTTCTTTTCACGGATGCTCATTTCAGATTGTATGTTCAACCAGGTTGCCCAAGAGTCTTACAAGTAGGAAGGGTTACCTGTGATTCCCTCCTCCAGGTTGAAATCGATGAATTACGCTCGTCAGGGCCTTCTGCTCCAGACGCTGAAAACATAGAGGATTTAACTGACGACGAGGATGACAGCAATGAATGAAGCTCTAGAAAATGACTGCCCTTTTGGATAATTATTGTAGCTAGGGACAAATTTAAACTTTTGCTGTTGTATTTGGTATGTTTTATGGGGAATGTGGTTGCTACGTCAGTCTGATCATCTGGCCCTGCTTAGCATCTGTTGATTCTGTTCCCCTCTAACCATTATTTGCACTACTTGTAGCCAATGAAACATGGGCAGCTCCCACGGCAAGATGTGAGTAAAGGT-CCAATATTGTATCTGTCTCAAAAAAAAAA]

[+] EMBL CF329463             [CATTGTTTATTTTCTTTTCACGGATGCTCATTTCAGATTGTATGTTCAACCAGGTTGCCCAAGAGTCTTACAAGTAGGAAGGGTTACCTGTGATTCCCTCCTCCAGGTTGAAATCGATGAATTACGCTCGTCAGGGCCTTCTGCTCCAGACGCTGAAAACATAGAGGATTTAACTGACGACGAGGATGACAGCAATGAATGAAGCTCTAGAAAATGACTGCCCTTTTGGATAATTATTGTAGCTAGGGACAAATTTAAACTTTTGCTGTTGTATTTGGTATGTTTTATGGGGAATGTGGTTGCTACGTCAGTCTGATCATCTGGCCCTGCTTAGCATCTGTTGATTCTGTTCCCCTCTAACCATTATTTGCACTACTTGTAGCCAATGAAACATGGGCAGCTCCCACGGCAAGATGTGAGTAAAGGT CCAATATTG                    ]
[-] EMBL CF329462             [ ATTGTTTATTTTCTTTTCACGGATGCTCATTTCAGATTGTATGTTCAACCAGGTTGCCCAAGAGTCTTACAAGTAGGAAGGGTTACCTGTGATTCCCTCCTCCAGGTTGAAATCGATGAATTACGCTCGTCAGGGCCTTTTGCTCCAGACGCTGAAAACATAGAGGATTTAACTGACGACGAGGATGACAGCAATGAATGAAGCTTTAGAAAATGACTGCCCTTTTGGATAATTATTGTAGCTAGGGACAAATTTAAACTTTTGCTGTTGTATTTGGTATGTTTTATGGGGAATGTGGTTGCTACGTCAGTCTGATCATCTGGCCCTGCTTAGCATCTGTTGATTCTGTTCCCCTCTAACCATTATTTGCACTACTTGTAGCCAATGAAACATGGGCAGCTCCCACGGCAAGATGTGAGTAAAGGTCCCAATATTGTATCTGTCTCAAAAAAAAAA]




>consensus_9093#1
CATTGTTTATTTTCTTTTCACGGATGCTCATTTCAGATTGTATGTTCAACCAGGTTGCCC
AAGAGTCTTACAAGTAGGAAGGGTTACCTGTGATTCCCTCCTCCAGGTTGAAATCGATGA
ATTACGCTCGTCAGGGCCTTCTGCTCCAGACGCTGAAAACATAGAGGATTTAACTGACGA
CGAGGATGACAGCAATGAATGAAGCTCTAGAAAATGACTGCCCTTTTGGATAATTATTGT
AGCTAGGGACAAATTTAAACTTTTGCTGTTGTATTTGGTATGTTTTATGGGGAATGTGGT
TGCTACGTCAGTCTGATCATCTGGCCCTGCTTAGCATCTGTTGATTCTGTTCCCCTCTAA
CCATTATTTGCACTACTTGTAGCCAATGAAACATGGGCAGCTCCCACGGCAAGATGTGAG
TAAAGGTCCAATATTGTATCTGTCTCAAAAAAAAAA

consensusID : consensus_9093#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 433
fasta sequence 
                              [TTCCCTCGAAAACCAAAACCAAAACCAAATCGCGGAAAGGGGCGCGGCGGAGATCGCGCGGTCGCCGGAGATGTCGTCGGTGGTCAACAAGCTCACTAACGCCGCCGAGAGGGAGTCGTCGGAGGCGGAAACCCTTATCGCGGAGATTCGCAAGGCGATCGNCGAAATGAAGTCCATCGCCGTCGATTACGAGAGGGAGAACAAGTCCGACAAGGTGAAGCAGCTTGAGGCGNCGGCGTTGGAACTGGTTTGCTTCGTGCGAGATTTGCACGTGTTACGCCGACGCGATCCGGAAGGTGCCTGGGGCGTACCAGCCATCTAATCAGATTACGGATTTCGAAAAGTTATCNAGGTTTAGGTTTACAAGGTCAAGGGGACTCATCAACATCAGTAGAGGACCATTTGTTCATTCGNAATTCAGAGAGGCAGTTTN]

[+] EMBL AU063112             [TTCCCTCGAAAACCAAAACCAAAACCAAATCGCGGAAAGGGGCGCGGCGGAGATCGCGCGGTCGCCGGAGATGTCGTCGGTGGTCAACAAGCTCACTAACGCCGCCGAGAGGGAGTCGTCGGAGGCGGAAACCCTTATCGCGGAGATTCGCAAGGCGATCGNCGAAATGAAGTCCATCGCCGTCGATTACGAGAGGGAGAACAAGTCCGACAAGGTGAAGCAGCTTGAGGCGNCGGCGTTGGAACTGGTTTGCTTCGTGCGAGATTTGCACGTGTTACGCCGACGCGATCCGGAAGGTGCCTGGGGCGTACCAGCCATCTAATCAGATTACGGATTTCGAAAAGTTATCNAGGTTTAGGTTTACAAGGTCAAGGGGACTCATCAACATCAGTAGAGGACCATTTGTTCATTCGNAATTCAGAGAGGCAGTTTN]




>consensus_9093#2
TTCCCTCGAAAACCAAAACCAAAACCAAATCGCGGAAAGGGGCGCGGCGGAGATCGCGCG
GTCGCCGGAGATGTCGTCGGTGGTCAACAAGCTCACTAACGCCGCCGAGAGGGAGTCGTC
GGAGGCGGAAACCCTTATCGCGGAGATTCGCAAGGCGATCGNCGAAATGAAGTCCATCGC
CGTCGATTACGAGAGGGAGAACAAGTCCGACAAGGTGAAGCAGCTTGAGGCGNCGGCGTT
GGAACTGGTTTGCTTCGTGCGAGATTTGCACGTGTTACGCCGACGCGATCCGGAAGGTGC
CTGGGGCGTACCAGCCATCTAATCAGATTACGGATTTCGAAAAGTTATCNAGGTTTAGGT
TTACAAGGTCAAGGGGACTCATCAACATCAGTAGAGGACCATTTGTTCATTCGNAATTCA
GAGAGGCAGTTTN

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9093#0      GCTTTCTCTTTCCCTCGAAAACCAAAACCAAAACCAAATCGCGGGAAAGCGGGCGCGGCG 60
consensus_9093#1      ------------------------------------------------------------
consensus_9093#2      ------------------------------------------------------------
                                                                                  

consensus_9093#0      GAGATCGCCGCCGGTCGCCGGAGATGTCGTCGGTGGTCAACAAGCTCACTAACGCCGCCG 120
consensus_9093#1      ------------------------------------------------------------
consensus_9093#2      ------------------------------------------------------------
                                                                                  

consensus_9093#0      AGAGGGAGTCGTCGGAGGCGGAAACCCTTATCGCGGAGATTCGCAAGGCGATCGGCGAAA 180
consensus_9093#1      ------------------------------------------------------------
consensus_9093#2      ------------------------------------------------------------
                                                                                  

consensus_9093#0      TGAAGTCCATCGCCGTCGATTACGAGAGGGAGAACAAGTCCGACAAGGTGAAGCAGCTTG 240
consensus_9093#1      ------------------------------------------------------------
consensus_9093#2      ------------------------------------------------------------
                                                                                  

consensus_9093#0      AGGCGGCGGCGCTGGAACTGGTTGCTTCGTGCGAAGATTGCACGTGCTACGCCGACGCGA 300
consensus_9093#1      ------------------------------------------------------------
consensus_9093#2      ------------------------------------------------------------
                                                                                  

consensus_9093#0      TCCGGAAGGTGCCTGGGGCGTACCAGCCATCTAATCAGGTGCGGACTCTGGTAGCCGCGA 360
consensus_9093#1      ------------------------------------------------------------
consensus_9093#2      ------------------------------------------------------------
                                                                                  

consensus_9093#0      TGATTATTTTTTTGGTTTCAGGGGCTTATTCGAATTGTATTGGAGGAATTTCGGCTAAAT 420
consensus_9093#1      ------------------------------------------------------------
consensus_9093#2      ------------------------------------------------------------
                                                                                  

consensus_9093#0      GGTTATTTGTTGTTTTGGTATTGATCACTGAATTTGTGTCAAGATGACGGATTTCGAAAA 480
consensus_9093#1      ------------------------------------------------------------
consensus_9093#2      ------------------------------------------------------------
                                                                                  

consensus_9093#0      GCTGATCGAGGCTGAGGTTAACAAGGTCAAGGGGAACTCATCAACATCAGTAGAGAACCA 540
consensus_9093#1      ------------------------------------------------------------
consensus_9093#2      ------------------------------------------------------------
                                                                                  

consensus_9093#0      TCTGCTCATTCGGCAGTTCAGAGAGGCAGTTTGGAATGTTCACCATGCTGGCCAACCAAT 600
consensus_9093#1      ------------------------------------------------------------
consensus_9093#2      ------------------------------------------------------------
                                                                                  

consensus_9093#0      GCCTGGTGATGAACAGGAGGATGTTCTTATGACCAGTACCCAAACTAGCATCTTAAATGT 660
consensus_9093#1      ------------------------------------------------------------
consensus_9093#2      ------------------------------------------------------------
                                                                                  

consensus_9093#0      CACGTGCCCATTAACTGGGAAGCCTGTAATTCAATTGACAGAGCCAGTTCGGTGGTAAGT 720
consensus_9093#1      ------------------------------------------------------------
consensus_9093#2      ------------------------------------------------------------
                                                                                  

consensus_9093#0      GTTAAGCAGTTAAACTGTTAAGGCATGGTTTTGTTTTGTAACTCTAGGAAATTTTTATTA 780
consensus_9093#1      ------------------------------------------------------------
consensus_9093#2      ------------------------------------------------------------
                                                                                  

consensus_9093#0      TGATATGTTACATATGCTAGATAGTTTCCTTCATGGTTGTTCAAAGAACACATACTCTCA 840
consensus_9093#1      ------------------------------------------------------------
consensus_9093#2      ------------------------------------------------------------
                                                                                  

consensus_9093#0      TTTTGTTTTTAAGCACAACTTAATGTCCCAAAAAATATCCATCATTAATCTGATTTCACC 900
consensus_9093#1      ------------------------------------------------------------
consensus_9093#2      ------------------------------------------------------------
                                                                                  

consensus_9093#0      TGCTAAAGACCAAGTTTTTGTTGGCACAAATAACATGTCGCAAAGCCTTAGGATTATGTT 960
consensus_9093#1      ------------------------------------------------------------
consensus_9093#2      ------------------------------------------------------------
                                                                                  

consensus_9093#0      TCTCCAATTTTCTTTTGCTGCCCAAGTTGAGATCATCAGGATCTGTTTCCTTCTCCATAT 1020
consensus_9093#1      ------------------------------------------------------------
consensus_9093#2      ------------------------------------------------------------
                                                                                  

consensus_9093#0      GGTTTGCATCTTGCGGTAACAATGGCTTGTCTTTCTGTGAAAATTCCATGCAGTAGAACA 1080
consensus_9093#1      ------------------------------------------------------------
consensus_9093#2      ------------------------------------------------------------
                                                                                  

consensus_9093#0      AGTTTGCTGTTGTCACTGAATAATCATCATTGTGTTCAAAGTATAATAGTGTATAGCTTT 1140
consensus_9093#1      ------------------------------------------------------------
consensus_9093#2      ------------------------------------------------------------
                                                                                  

consensus_9093#0      CTGGGGGCAGAAATAGTGCGGTTTCTACCAGTACAATCCTTTCAGCCAATTTGACTATTA 1200
consensus_9093#1      ------------------------------------------------------------
consensus_9093#2      ------------------------------------------------------------
                                                                                  

consensus_9093#0      GGCATGATTCAAACTAATCATTCCCCTGTATGTAAGGTCTTTCTACAGTTTTACTATTCA 1260
consensus_9093#1      ------------------------------------------------------------
consensus_9093#2      ------------------------------------------------------------
                                                                                  

consensus_9093#0      CATAATTGAATTCAAATCGGAAACTCCTACTACTTAATTTGCTTATTTTTCTCAGTCAAA 1320
consensus_9093#1      ------------------------------------------------------------
consensus_9093#2      ------------------------------------------------------------
                                                                                  

consensus_9093#0      TGGATTTCTCCTAAGTTGTTGCATGTAGAAAGCAGTGTGAACATATATTTGCAGATATTC 1380
consensus_9093#1      ------------------------------------------------------------
consensus_9093#2      ------------------------------------------------------------
                                                                                  

consensus_9093#0      AGTTTTTGCGTTGAACTCAAGGCTATTTGTGTTGTTCAGTGCGGATTGTAGGCACATATA 1440
consensus_9093#1      ------------------------------------------------------------
consensus_9093#2      ------------------------------------------------------------
                                                                                  

consensus_9093#0      TGAAAAAGTTCCAATTATGCATTACATAAGAAACCAAAAACCTCCGAAGTGCCCTATCG- 1499
consensus_9093#1      --------CATTGTTTATTTTCTTTTCACGGATGCTCA---TTTCAGATTGTATGTTCAA 49
consensus_9093#2      ----------------------TTCCCTCGAAAACCAAA--ACCAAAACCAAATCGCGGA 36
                                            *      * *  *  *         *            

consensus_9093#0      -CAGGTTGCCCAAGAG-TCTTACAA--GTAGGAAGGGTTACCTGTGATTCCCTCCTCCAG 1555
consensus_9093#1      CCAGGTTGCCCAAGAG-TCTTACAA--GTAGGAAGGGTTACCTGTGATTCCCTCCTCCAG 106
consensus_9093#2      AAGGGGCGCGGCGGAGATCGCGCGGTCGCCGGAGATGTCGTCGGTGGTCAACAAGCTCA- 95
                         **  **    *** **   *    *  ***   **   * *** *   *     ** 

consensus_9093#0      GTTGAAATCGATGAATTACGCTCGTCAGGGCCTTCTGCTCCAGACGCTGAAAACATAGAG 1615
consensus_9093#1      GTTGAAATCGATGAATTACGCTCGTCAGGGCCTTCTGCTCCAGACGCTGAAAACATAGAG 166
consensus_9093#2      -CTAACGCCGCCGAGAGGGAGTCGTCGGAGGCGGAAACCCTTATCGCGGAGATTCGCAAG 154
                        * *   **  **       ***** * * *     * *    *** ** *      **

consensus_9093#0      GATTTAACTGACGACGAGGATGACAGCAATGAATGAAGCTCTAGAAAATGACTGCCCTTT 1675
consensus_9093#1      GATTTAACTGACGACGAGGATGACAGCAATGAATGAAGCTCTAGAAAATGACTGCCCTTT 226
consensus_9093#2      G---CGATCGNCGA----AATGAAGTCCATCGCCGTCGATTACGAGAGGGAGAACAAGTC 207
                      *     *  * ***     ****   * **    *  * *   ** *  **   *   * 

consensus_9093#0      TGGATAATTATTGTAGCTAGGGACAAATTTAAACTTTTGCTGTTGTATTTGGTATGTTTT 1735
consensus_9093#1      TGGATAATTATTGTAGCTAGGGACAAATTTAAACTTTTGCTGTTGTATTTGGTATGTTTT 286
consensus_9093#2      CGACAAGGTGAAGCAGCTTGAGGCGN-----------CGGCGTTGGAACTGGTTTGCTTC 256
                       *   *  *   * **** * * *              *  **** *  **** ** ** 

consensus_9093#0      ATGGGGAATGTGGT--TGCTACGTCAGTCTGATCATCTGGC--CCTG---CTTAGCATCT 1788
consensus_9093#1      ATGGGGAATGTGGT--TGCTACGTCAGTCTGATCATCTGGC--CCTG---CTTAGCATCT 339
consensus_9093#2      GTGCGAGATTTGCACGTGTTACGCCGACGCGATCCGGAAGGTGCCTGGGGCGTACCAGCC 316
                       ** *  ** **    ** **** *     ****     *   ****   * ** ** * 

consensus_9093#0      GTTGATTCTGTTCCCCTCTAACCATTATTTGCACTACTTGTAGCCAATGAAACATGGGCA 1848
consensus_9093#1      GTTGATTCTGTTCCCCTCTAACCATTATTTGCACTACTTGTAGCCAATGAAACATGGGCA 399
consensus_9093#2      ATCTAATCAGATTACGGATTTCGAAAAGTTATCNAGGTTTAGGTTTACAAGGTCAAGGGG 376
                       *  * ** * *  *   *  * *  * **       **   *   *  *      **  

consensus_9093#0      GCTCCCACGGCAAGATGTGAGTAAAGGTCCAATATTGTATCTGT--CTCTCTCAAATCTC 1906
consensus_9093#1      GCTCCCACGGCAAGATGTGAGTAAAGGTCCAATATTGTATCTGT--CTCAAAAAAAAAA- 456
consensus_9093#2      ACTCATC------AACATCAGTAGAGGACCATTTGTTCATTCGNAATTCAGAGAGGCAGT 430
                       ***          *  * **** *** *** *  *  **  *    **    *      

consensus_9093#0      ATATATTCAGTGCTGGAGAAACAAAAA 1933
consensus_9093#1      ---------------------------
consensus_9093#2      TTN------------------------ 433


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)