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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9100#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1307 fasta sequence
[CCCGAACGCCACGGAGCAGCATGGCCGCGCCGCCGCCGCCGGCGAACCAGTTCGTCTACATCGACGCGGCGGCGCTCCACTCCGTCCTCCCCTTCCCGTCCCTGATCTCCCACCTCGGCGCCGGCCTCCCCGCCTTCGCCGCCGGCATCCACTGCCCGCACCGCGTCTCCTTCCCGCTCCCCACCGCGCCATCCGCCTCCCTCCTCCTCATGCCATCCTGGAGCGCGCACCCCTCGCTCCCCTACCTCGCGCTCAAGGCCGTCACCTCGTTTCCGGCCAACTCCCCGCGCCTCCCCTCCGTCCACGCCGCCGTCTCCCTCTTCGACTCCGCCTCCGGCGTCCCCCTCGCCTCCCTCGACGGCTCCGCGCTCACCCTCCTCCGCACCGCCGCCGTGTCCGCGCTCGCCGCGTCCCTCCTGGCATCCCCCACCCGCCCGCCCTCCACCCTCGCGCTCGCCGGCGCCGGCGCCCTCGCGCCCTACCTCGCCGAAGCCCACCTCTCCGCCCTCCCGTCCATCTCCCGAATCCTCATCTGGAACCGCACCAAGGCCAAATCCGCCGCGCTCGCCGCCAGGCTCCGTGACGCGCACCCGGGGGTCGCCGTCGAGGAGGCGGACAGCATGGACGAGGCGGTGTCCGCGGCGGACGTCGTGAGCTGCGCGACGGGGTCGCAGGAGCCGATCGTGCGCGGGGAGCTACTGAAGCACGGGGCACACCTGGACCTCGTGGGCTCGTTCACGCCGGCGATGAGGGAGTGCGACGACGAGGCGCTGCGGCGGGGGAGGGTGTTCATCGACTTCGAGGCGGCGATGCAGGAGGCCGGAGAGCTGGTGGGCGCGCTCCAGCGCGGCGTGCTCCGGAGGGAGGACGTGGCCGGGACGCTCGCGGAGCTTGCCGCCGGGAGCGTGGCTGGGCGGCGCTGCGACGACGAGATCACGGTGTTCAAGTCCGTCGGGACGGCGGTGGTCGATCTTTTGGCGGCGCAGCTCGCCTACGAGACTTACATTGCTACAACCACCAAGAAGACATGAACTCGATGCATCATGGATGGGTTAGTTTCAGAGACTGCAAGAAGGGTGTTTCCTTTCAGAGATTCGTCATAGAAGTACAAATAAATTGGTGAGAATGGTTATGATCATTCTCCATAGCATTGTTTACTCGCCACTGATTAAAATAAAAATTTAGTATGGCCTTGCAATTCTCTGTTCTTTGTACCTGATGATAAGATGTTTTCTGCAAGGAGTACTGTAATTCGATTGTTCGCTTTTGTAACCTATGAACTGGGGTATCATATCTGTTTTATGGAT]
[+] EMBL AK106036 [CCCGAACGCCACGGAGCAGCATGGCCGCGCCGCCGCCGCCGGCGAACCAGTTCGTCTACATCGACGCGGCGGCGCTCCACTCCGTCCTCCCCTTCCCGTCCCTGATCTCCCACCTCGGCGCCGGCCTCCCCGCCTTCGCCGCCGGCATCCACTGCCCGCACCGCGTCTCCTTCCCGCTCCCCACCGCGCCATCCGCCTCCCTCCTCCTCATGCCATCCTGGAGCGCGCACCCCTCGCTCCCCTACCTCGCGCTCAAGGCCGTCACCTCGTTTCCGGCCAACTCCCCGCGCCTCCCCTCCGTCCACGCCGCCGTCTCCCTCTTCGACTCCGCCTCCGGCGTCCCCCTCGCCTCCCTCGACGGCTCCGCGCTCACCCTCCTCCGCACCGCCGCCGTGTCCGCGCTCGCCGCGTCCCTCCTGGCATCCCCCACCCGCCCGCCCTCCACCCTCGCGCTCGCCGGCGCCGGCGCCCTCGCGCCCTACCTCGCCGAAGCCCACCTCTCCGCCCTCCCGTCCATCTCCCGAATCCTCATCTGGAACCGCACCAAGGCCAAATCCGCCGCGCTCGCCGCCAGGCTCCGTGACGCGCACCCGGGGGTCGCCGTCGAGGAGGCGGACAGCATGGACGAGGCGGTGTCCGCGGCGGACGTCGTGAGCTGCGCGACGGGGTCGCAGGAGCCGATCGTGCGCGGGGAGCTACTGAAGCCCGGGGCGCACCTGGACCTCGTGGGCTCGTTCACGCCGGCGATGAGGGAGTGCGACGACGAGGCGCTGCGGCGGGGGAGGGTGTTCATCGACTTCGAGGCGGCGATGCAGGAGGCCGGAGAGCTGGTGGGCGCGCTCCAGCGCGGCGTGCTCCGGAGGGAGGACGTGGCCGGGACGCTCGCGGAGCTTGCCGCCGGGAGCGTGGCTGGGCGGCGCTGCGACGACGAGATCACGGTGTTCAAGTCCGTCGGGACGGCGGTGGTCGATCTTTTGGCGGCGCAGCTCGCCTACGAGACTTACATTGCTACAACCACCAAGAAGACATGAACTCGATGCATCATGGATGGGTTAGTTTCAGAGACTGCAAGAAGGGTGTTTCGTTTCAGAGATTCGTCATAGAAGTACAAATAAATTGGTGAGAATGGTTATGATCA TGTCCATAGCA TGTTTACTCGCCACTGATTAAAATAAAAATTTAGTATGGCCTTGCAATTCTCTGTTCTTTGTACCTGATGATAAGATGTTTTCTGCAAGGAGTACTGTAATTCGATTGTTCGCTTTTGTAACCTATGAACTGGGGTATCATATCTGTTTTATGGAT]
[+] EMBL CB663744 [ GCATGGCCGCGCCGCCGCCGCCGGCGAACCAGTTCGTCTACATCGACGCGGCGGCGCTCCACTCCGTCCTCCCCTTCCCGTCCCTGATCTCCCACCTCGGCGCCGGCCTCCCCGCCTTCGCCGCCGGCATCCACTGCCCGCACCGCGTCTCCTTCCCGCTCCCCACCGCGCCATCCGCCTCCCTCCTCCTCATGCCATCCTGGAGCGCGCACCCCTCGCTCCCCTACCTCGCGCTCAAGGCCGTCACCTCGTTTCCGGCCAACTCCCCGCGCCTCCCCTCCGTCCACGCCGCCGTCTCCCTCTTCGACTCCGCCTCCGGCGTCCCCCTCGCCGGCGTCGACGGCTCCGCGCTCACCCTCCTCCGCACCGCCGCCGTGTCCGCGCTCGCCGCGTCCCTCCTGGCATCCCCCACCCGCCCGCCCTCCACCCTCGCGCTCGCCGGCGCCGGGGCCCTCGCGCCCTACCTCcgc ]
[-] EMBL CB624223 [ CCGCCCTCCCGTCCATCTCCGGAATCCTCATCTGGAACCGCACCAAGGCCAAATCCGCCGCGCTCGCCGCCAGGTTCCGTGACGCGCACCCGGGGGTCGCCGTCGAGGAGGCGGACAGCATGGACGAGGCGGTGTCCGCGGCGGACGTCGTGAGCTGCGCGACGGGGTCGCAGGAGCCGATCGTGCGCGGGGAGCTACTGAAGCACGGGGCACACCTGGACCTCGTGGGCTCGTTCACGCCGGCGATGAGGGAGTGCGACGACGAGGCGCTGCGGCGGGGGAGGGTGTTCATCGACTTCGAGGCGGCGATGCAGGAGGCCGGAGAGCTGGTGGGCGCGCTCCAGCGCGGCGTGCTCCGGAGGGAGGACGTGGCCGGGACGCTCGCGGAGCTTGCCGCCGGGAGCGTGGCTGGGCGGCGCTGCGACGACGAGATCACGGTGTTCAAGTCCGTCGGGACGGCGGTGGTCGATCTTTTGGCGGCGCAGCTCGCCTACGAGACTTACATTGCTACAACCACCAAGAAGACATGAACTCGATGCATCATGGATGGGTTAGTTTCAGAGACTGCAAGAAGGGTGTTTCCTTTCAGAGATTCGTCATAGAAGTACAAATAAATTGGTGAGAATGGTTATGATCATTCTCCATAGCATTGTTTACTCGCCACTGATTAAAATAAAAATTTAGTA ]
[-] EMBL CB624227 [ AATCCGCCGCGCTCGCCGCCAGGCTCCGTGACGCGCACCCGGGGGTCGCCGTCGAGGAGGCGGACAGCATGGACGAGGCGGTGTCCGCGGCGGACGTCGTGAGCTGCGCGACGGGGTCGCAGGAGCCGATCGTGCGCGGGGAGCTACTGAAGCACGGGGCACACCTGGACCTCGTGGGCTCGTTCACGCCGGCGATGAGGGAGTGCGACGACGAGGCGCTGCGGCGGGGGAGGGTGTTCATCGACTTCGAGGCGGCGATGCAGGAGGCCGGAGAGCTGGTGGGCGCGCTCCAGCGCGGCGTGCTCCGGAGGGAGGACGTGGCCGGGACGCTCGCGGAGCTTGCCGCCGGGAGCGTGGCTGGGCGGCGCTGCGACGACGAGATCACGGTGTTCAAGTCCGTCGGGACGGCGGTGGTCGATCTTTTGGCGGCGCAGCTCGCCTACGAGACTTACATTGCTACAACCACCAAGAAGACATGAACTCGATGCATCATGGATGGGTTAGTTTCAGAGACTGCAAGAAGGGTGTTTCCTTTCAGAGATTCGTCATAGAAGTACAAATAAATTGGTGAGAATGGTTATGATCATTCTCCATAGCATTGTTTACTCGCCACTGATTAAAATAAAAATTTAGTATGGCCTTG ]
[-] EMBL CB624224 [ AATCCGCCGCGCTCGCCGCCAGGCTCCGTGACGCGCACCCGGGGGTCGCCGTCGAGGAGGCGGACAGCATGGACGAGGCGGTGTCCGCGGCGGACGTCGTGAGCTGCGCGACGGGGTCGCAGGAGCCGATCGTGCGCGGGGAGCTACTGAAGCACGGGGCACACCTGGACCTCGTGGGCTCGTTCACGCCGGCGATGAGGGAGTGCGACGACGAGGCGCTGCGGCGGGGGAGGGTGTTCATCGACTTCGAGGCGGCGATGCAGGAGGCCGGAGAGCTGGTGGGCGCGCTCCAGCGCGGCGTGCTCCGGAGGGAGGACGTGGCCGGGACGCTCGCGGAGCTTGCCGCCGGGAGCGTGGCTGGGCGGCGCTGCGACGACGAGATCACGGTGTTCAAGTCCGTCGGGACGGCGGTGGTCGATCTTTTGGCGGCGCAGCTCGCCTACGAGACTTACATTGCTACAACCACCAAGAAGACATGAACTCGATGCATCATGGATGGGTTAGTTTCAGAGACTGCAAGAAGGGTGTTTCCTTTCAGAGATTCGTCATAGAAGTACAAATAAATTGGTGAGAATGGTTATGATCATTCTCCATAGCATTGTTTACTCGCCACTGATTAAAATAAAAATTTAGTATGGCCTT ]
[-] EMBL CB663745 [ CAGCATGGACGAGGCGGTGTCCGCGGCGGACGTCGTGAGCTGCGCGACGGGGTCGCAGGAGCCGATCGTGCGCGGGGAGCTACTGAAGCCCGGGGCGCACCTGGACCTCGTGGGCTCGTTCACGCCGGCGATGAGGGAGTGCGACGACGAGGCGCTGCGGCGGGGGAGGGTGTTCATCGACTTCGAGGCGGCGATGCAGGAGGCCGGAGAGCTGGTGGGCGCGCTCCAGCGCGGCGTGCTCCGGAGGGAGGACGTGGCCGGGACGCTCGCGGAGCTTGCCGCCGGGAGCGTGGCTGGGCGGCGCTGCGACGACGAGATCACGGTGTTCAAGTCCGTCGGGACGGCGGTGGTCGATCTTTTGGCGGCGCAGCTCGCCTACGAGACTTACATTGCTACAACCACCAAGAAGACATGAACTCGATGCATCATGGATGGGTTAGTTTCAGAGACTGCAAGAAGGGTGTTTCGTTTCAGAGATTCGTCATAGAAGTACAAATAAATTGGTGAGAATGGTTATGATCA TGTCCATAGCA TGTTTACTCGCCACTGATTAAAATAAAAATTTAGTATGGCCTTGCAATTCTCTGTTCTTTGTACCTGATGATAAGATGTTTTCTGCAAGGAGTACTGTAATTCGATTGTTCGCTTTTGTAACCTATGAACTGGGGTATCATATCTGTT ]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||