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Oryza sativa
cluster # 9128 cluster # 9128       Sequences # 6       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9128#0 length = 2583 sequences # 5  
consensus_9128#1 length = 237 sequences # 1  

consensusID : consensus_9128#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 2583
fasta sequence
                              [CAGTCTCCTCTCCTCCTCCGCTCGAGCGAGTGAGTCCCGACCACGTCGCTGCCCTCGCCTCACCGCCGGCCAACCGCCGTGACGAGAGATCGAGCAGGGCGGGGCATGGACGAGCCTTCGCCGCGCGGAGGTGGGTGCGCCGGGGAGCCGCCCCGCATCCGGAGGTTGGAGGAGTCGGTGGTGAACCGCATCGCGGCGGGGGAGGTGATCCAGCGGCCGTCGTCGGCGGTGAAGGAGCTCATCGAGAACAGCCTCGACGCTGGCGCCTCCAGCGTCTCCGTTGCGGTGAAGGACGGTGGCCTCAAGCTCATCCAGGTCTCCGATGACGGCCATGGCATCAGGTTTGAGGATTTGGCAATATTGTGCGAAAGGCATACTACCTCAAAGTTATCTGCATACGAGGATCTGCAGACCATAAAATCGATGGGGTTCAGAGGGGAGGCTTTGGCTAGTATGACTTATGTTGGCCATGTTACCGTGACAACGATAACAGAAGGCCAATTGCACGGCTACAGGGTTTCTTACAGAGATGGTGTAATGGAGAATGAGCCTAAGCCTTGCGCTGCGGTGAAAGGAACTCAAGTCATGGTTGAAAATCTATTTTACAACATGGTAGCCCGCAAGAAAACATTGCAGAACTCCAATGATGACTACCCCAAGATCGTAGACTTCATCAGTCGGTTTGCAGTCCATCACATCAACGTTACCTTCTCTTGCAGAAAGCATGGAGCCAATAGAGCAGATGTTCATAGTGCAAGTACATCCTCAAGGTTAGATGCTATCAGGAGTGTCTATGGGGCTTCTGTCGTTCGTGATCTCATAGAAATAAAGGTTTCATATGAGGATGCTGCAGATTCAATCTTCAAGATGGATGGTTACATCTCAAATGCAAATTATGTGGCAAAGAAGATTACAATGATTCTTTTCATAAATGATAGGCTTGTAGACTGTACTGCTTTGAAAAGAGCTATTGAATTTGTGTACTCTGCAACATTGCCTCAAGCATCCAAACCTTTCATATACATGTCCATACATCTTCCATCAGAACACGTGGATGTTAATATACACCCAACCAAGAAAGAGGTTAGCCTTTTGAATCAAGAGCGTATTATTGAAACAATAAGAAATGCTATTGAGGAAAAACTGATGAATTCTAATACAACCAGGATATTCCAAACTCAGGCATTAAACTTATCAGGGATTGCTCAAGCTAACCCACAAAAGGATAAGGTTTCTGAGGCCAGTATGGGTTCTGGAACAAAATCTCAAAAAATTCCTGTGAGCCAAATGGTCAGAACAGATCCACGCAATCCATCTGGAAGATTGCACACCTACTGGCACGGGCAATCTTCAAATCTTGAAAAGAAATTTGATCTTGTATCTGTAAGAAATGTTGTAAGATCAAGGAGAAACCAAAAAGATGCTGGTGATTTGTCAAGCCGTCATGAGCTCCTTGTGGAAATAGATTCTAGCTTCCATCCTGGCCTTTTGGACATTGTCAAGAACTGCACATATGTTGGACTTGCCGATGAAGCCTTTGCTTTGATACAACACAATACCCGCTTATACCTTGTAAATGTGGTAAATATTAGTAAAGAACTTATGTACCAGCAAGCTTTGTGCCGTTTTGGGAACTTCAATGCTATTCAGCTCAGTGAACCAGCTCCACTTCAGGAGTTGCTGGTGATGGCACTGAAAGACGATGAATTGATGAGTGATGAAAAGGATGATGAGAAACTGGAGATTGCAGAAGTAAACACTGAGATACTAAAAGAAAATGCTGAGATGATTAATGAGTACTTTTCTATTCACATTGATCAAGATGGCAAATTGACAAGACTTCCTGTTGTACTGGACCAGTACACCCCTGATATGGACCGTCTTCCAGAATTTGTGTTGGCTTTAGGAAATGATGTTACTTGGGATGACGAGAAAGAGTGCTTCAGAACAGTAGCTTCTGCTGTAGGAAACTTCTATGCACTTCATCCCCCAATCCTTCCAAATCCATCTGGGAATGGCATTCATTTATACAAGAAAAATAGAGATTCAATGGCTGATGAACATGCTGAGAATGATCTAATATCAGATGAAAATGACGTTGATCAAGAACTTCTTGCGGAAGCAGAAGCAGCATGGGCCCAACGTGAGTGGACCATTCAGCATGTCTTGTTTCCATCCATGCGACTTTTCCTCAAGCCCCCGAAGTCAATGGCAACAGATGGAACGTTTGTGCAGGTTGCTTCCTTGGAGAAACTCTACAAGATTTTTGAAAGGTGTTAGCTCATAAGTGAGAAAATGAAGGCAGAGTAAGATCATGATTCATGGAGTGTTTTTGAAAATGTGTATAATTTCACCGTATTATGTACTTTGATAGTGTCTGTAGAAACTGAAGAAAGAAAGATGGCTTTACTTCTGAATTGAAAGTTAACGATGCCAGCAATTGTATATTCTGATCAAACATTGGCGTCTACTACTCTACTAGCAAGTGATCTTCCTTAGCTCCAGGTCGACAAGAATCAAGAATGTGTGTGTTGTACCCAATTTATTTAGCCAAAATGAAAAGGTATATTTTCTAAGTTCAAA]

[+] EMBL AK103319             [CAGTCTCCTCTCCTCCTCCGCTCGAGCGAGTGAGTCCCGACCACGTCGCTGCCCTCGCCTCACCGCCGGCCAACCGCCGTGACGAGAGATCGAGCAGGGCGGGGCATGGACGAGCCTTCGCCGCGCGGAGGTGGGTGCGCCGGGGAGCCGCCCCGCATCCGGAGGTTGGAGGAGTCGGTGGTGAACCGCATCGCGGCGGGGGAGGTGATCCAGCGGCCGTCGTCGGCGGTGAAGGAGCTCATCGAGAACAGCCTCGACGCTGGCGCCTCCAGCGTCTCCGTTGCGGTGAAGGACGGTGGCCTCAAGCTCATCCAGGTCTCCGATGACGGCCATGGCATCAGGTTTGAGGATTTGGCAATATTGTGCGAAAGGCATACTACCTCAAAGTTATCTGCATACGAGGATCTGCAGACCATAAAATCGATGGGGTTCAGAGGGGAGGCTTTGGCTAGTATGACTTATGTTGGCCATGTTACCGTGACAACGATAACAGAAGGCCAATTGCACGGCTACAGGGTTTCTTACAGAGATGGTGTAATGGAGAATGAGCCTAAGCCTTGCGCTGCGGTGAAAGGAACTCAAGTCATGGTTGAAAATCTATTTTACAACATGGTAGCCCGCAAGAAAACATTGCAGAACTCCAATGATGACTACCCCAAGATCGTAGACTTCATCAGTCGGTTTGCAGTCCATCACATCAACGTTACCTTCTCTTGCAGAAAGCATGGAGCCAATAGAGCAGATGTTCATAGTGCAAGTACATCCTCAAGGTTAGATGCTATCAGGAGTGTCTATGGGGCTTCTGTCGTTCGTGATCTCATAGAAATAAAGGTTTCATATGAGGATGCTGCAGATTCAATCTTCAAGATGGATGGTTACATCTCAAATGCAAATTATGTGGCAAAGAAGATTACAATGATTCTTTTCATAAATGATAGGCTTGTAGACTGTACTGCTTTGAAAAGAGCTATTGAATTTGTGTACTCTGCAACATTGCCTCAAGCATCCAAACCTTTCATATACATGTCCATACATCTTCCATCAGAACACGTGGATGTTAATATACACCCAACCAAGAAAGAGGTTAGCCTTTTGAATCAAGAGCGTATTATTGAAACAATAAGAAATGCTATTGAGGAAAAACTGATGAATTCTAATACAACCAGGATATTCCAAACTCAGGCATTAAACTTATCAGGGATTGCTCAAGCTAACCCACAAAAGGATAAGGTTTCTGAGGCCAGTATGGGTTCTGGAACAAAATCTCAAAAAATTCCTGTGAGCCAAATGGTCAGAACAGATCCACGCAATCCATCTGGAAGATTGCACACCTACTGGCACGGGCAATCTTCAAATCTTGAAAAGAAATTTGATCTTGTATCTGTAAGAAATGTTGTAAGATCAAGGAGAAACCAAAAAGATGCTGGTGATTTGTCAAGCCGTCATGAGCTCCTTGTGGAAATAGATTCTAGCTTCCATCCTGGCCTTTTGGACATTGTCAAGAACTGCACATATGTTGGACTTGCCGATGAAGCCTTTGCTTTGATACAACACAATACCCGCTTATACCTTGTAAATGTGGTAAATATTAGTAAAGAACTTATGTACCAGCAAGCTTTGTGCCGTTTTGGGAACTTCAATGCTATTCAGCTCAGTGAACCAGCTCCACTTCAGGAGTTGCTGGTGATGGCACTGAAAGACGATGAATTGATGAGTGATGAAAAGGATGATGAGAAACTGGAGATTGCAGAAGTAAACACTGAGATACTAAAAGAAAATGCTGAGATGATTAATGAGTACTTTTCTATTCACATTGATCAAGATGGCAAATTGACAAGACTTCCTGTTGTACTGGACCAGTACACCCCTGATATGGACCGTCTTCCAGAATTTGTGTTGGCTTTAGGAAATGATGTTACTTGGGATGACGAGAAAGAGTGCTTCAGAACAGTAGCTTCTGCTGTAGGAAACTTCTATGCACTTCATCCCCCAATCCTTCCAAATCCATCTGGGAATGGCATTCATTTATACAAGAAAAATAGAGATTCAATGGCTGATGAACATGCTGAGAATGATCTAATATCAGATGAAAATGACGTTGATCAAGAACTTCTTGCGGAAGCAGAAGCAGCATGGGCCCAACGTGAGTGGACCATTCAGCATGTCTTGTTTCCATCCATGCGACTTTTCCTCAAGCCCCCGAAGTCAATGGCAACAGATGGAACGTTTGTGCAGGTTGCTTCCTTGGAGAAACTCTACAAGATTTTTGAAAGGTGTTAGCTCATAAGTGAGAAAATGAAGGCAGAGTAAGATCATGATTCATGGAGTGTTTTTGAAAATGTGTATAATTTCACCGTATTATGTACTTTGATAGTGTCTGTAGAAACTGAAGAAAGAAAGATGGCTTTACTTCTGAATTGAAAGTTAACGATGCCAGCAATTGTATATTCTGATCAAACATTGGCGTCTACTACTCTACTAGCAAGTGATCTTCCTTAGCTCCAGGTCGACAAGAATCAAGAATGTGTGTGTTGTACCCAATTTATTTAGCCAAAATGAAAAGGTATATTTTCTAAGTTCAAA]
[+] EMBL AU166528             [             TCCTCCGCTCGAGCGAGTGAGTCCCGACCACGTCGCTGCCCTCGCCTCACCGCCGGCCAACCGCCGTGACGAGAGATCGAGCAGGGCGGGGCATGGACGAGCCTTCGCCGCGCGGAGGTGGGTGCGCCGGGGAGCCGCCCCGCATCCGGAGGTTGGAGGAGTCGGTGGTGAACCGCATCGCGGCGGGGGAGGTGATCCAGCGGCCGTCGTCGGCGGTGAAGGAGCTCATCGAGAACAGCCTCGACGCTGGCGCCTCCAGCGTCTCCGTTGCGGTGAAGGACGGTGGCCTCAAGCTCATCCAGGTCTCCGATGACGGCCATGGCATCAGGTTTGAGGATTTGGCAATATTGTGCGAAAGGCATACTACCTCAAAGTTATCTGCATACGAGGATCTGCAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL AK070111             [                                   CCCGACCACGTCGCTGCCCTCGCCTCACCGCCGGCCAACCGCCGTGACGAGAGATCGAGCAGGGCGGGGCATGGACGAGCCTTCGCCGCGCGGAGGTGGGTGCGCCGGGGAGCCGCCCCGCATCCGGAGGTTGGAGGAGTCGGTGGTGAACCGCATCGCGGCGGGGGAGGTGATCCAGCGGCCGTCGTCGGCGGTGAAGGAGCTCATCGAGAACAGCCTCGACGCTGGCGCCTCCAGCGTCTCCGTTGCGGTGAAGGACGGTGGCCTCAAGCTCATCCAGGTCTCCGATGACGGCCATGGCATCAGGTTTGAGGATTTGGCAATATTGTGCGAAAGGCATACTACCTCAAAGTTATCTGCATACGAGGATCTGCAGACCATAAAATCGATGGGGTTCAGAGGGGAGGCTTTGGCTAGTATGACTTATGTTGGCCATGTTACCGTGACAACGATAACAGAAGGCCAATTGCACGGCTACAGGGTTTCTTACAGAGATGGTGTAATGGAGAATGAGCCTAAGCCTTGCGCTGCGGTGAAAGGAACTCAAGTCATGGTTGAAAATCTATTTTACAACATGGTAGCCCGCAAGAAAACATTGCAGAACTCCAATGATGACTACCCCAAGATCGTAGACTTCATCAGTCGGTTTGCAGTCCATCACATCAACGTTACCTTCTCTTGCAGAAAGCATGGAGCCAATAGAGCAGATGTTCATAGTGCAAGTACATCCTCAAGGTTAGATGCTATCAGGAGTGTCTATGGGGCTTCTGTCGTTCGTGATCTCATAGAAATAAAGGTTTCATATGAGGATGCTGCAGATTCAATCTTCAAGATGGATGGTTACATCTCAAATGCAAATTATGTGGCAAAGAAGATTACAATGATTCTTTTCATAAATGATAGGCTTGTAGACTGTACTGCTTTGAAAAGAGCTATTGAATTTGTGTACTCTGCAACATTGCCTCAAGCATCCAAACCTTTCATATACATGTCCATACATCTTCCATCAGAACACGTGGATGTTAATATACACCCAACCAAGAAAGAGGTTAGCCTTTTGAATCAAGAGCGTATTATTGAAACAATAAGAAATGCTATTGAGGAAAAACTGATGAATTCTAATACAACCAGGATATTCCAAACTCAGGCATTAAACTTATCAGGGATTGCTCAAGCTAACCCACAAAAGGATAAGGTTTCTGAGGCCAGTATGGGTTCTGGAACAAAATCTCAAAAAATTCCTGTGAGCCAAATGGTCAGAACAGATCCACGCAATCCATCTGGAAGATTGCACACCTACTGGCACGGGCAATCTTCAAATCTTGAAAAGAAATTTGATCTTGTATCTGTAAGAAATGTTGTAAGATCAAGGAGAAACCAAAAAGATGCTGGTGATTTGTCAAGCCGTCATGAGCTCCTTGTGGAAATAGATTCTAGCTTCCATCCTGGCCTTTTGGACATTGTCAAGAACTGCACATATGTTGGACTTGCCGATGAAGCCTTTGCTTTGATACAACACAATACCCGCTTATACCTTGTAAATGTGGTAAATATTAGTAAAGAACTTATGTACCAGCAAGCTTTGTGCCGTTTTGGGAACTTCAATGCTATTCAGCTCAGTGAACCAGCTCCACTTCAGGAGTTGCTGGTGATGGCACTGAAAGACGATGAATTGATGAGTGATGAAAAGGATGATGAGAAACTGGAGATTGCAGAAGTAAACACTGAGATACTAAAAGAAAATGCTGAGATGATTAATGAGTACTTTTCTATTCACATTGATCAAGATGGCAAATTGACAAGACTTCCTGTTGTACTGGACCAGTACACCCCTGATATGGACCGTCTTCCAGAATTTGTGTTGGCTTTAGGAAATGATGTTACTTGGGATGACGAGAAAGAGTGCTTCAGAACAGTAGCTTCTGCTGTAGGAAACTTCTATGCACTTCATCACCCAATCCTTCCAAATCCATCTGGGAATGGCATTCATTTATACAAGAAAAATAGAGATTCAATGGCTGATGAACATGCTGAGAATGATCTAATATCAGATGAAAATGACGTTGATCAAGAACTTCTTGCGGAAGCAGAAGCAGCATGGGCCCAACGTGAGTGGACCATTCAGCATGTCTTGTTTCCATCCATGCGACTTTTCCTCAAGCCCCCGAAGTCAATGGCAACAGATGGAACGTTTGTGCAGGTTGCTTCCTTGGAGAAACTCTACAAGATTTTTGAAAGGTGTTAGCTCATAAGTGAGAAAATGAAGGCAGAGTAAGATCATGATTCATGGAGTGTTTTTGAAAATGTGTATAATTTCACCGTATTATGTACTTTGATAGTGTCTGTAGAAACTGAAGAAAGAAAGATGGCTTTACTTCTGAATTGAAAGTTAACGATGCCAGCAATTGTATATTCTGATCAAACATTGGCGTCTACTACTCTACTAGCAAGTGATCTTCCTTAGCTCCAGGTCGACAAGAATCAAGAATGTGTGTGTTGTACCCAATTTATTTAGCCAAAATGAAAAGGTATATT             ]
[+] EMBL CF306246             [                                                                                                                                                                                                                                                  CGAGAACAGCCTCGACGCTGGCGCCTCCAGCGTCTCCGTTGCGGTGAAGGACGGTGGCCTCAAGCTCATCCAGGTCTCCGATGACGGCCATGGCATCAGGTTTGAGGATTTGGCAATATTGTGCGAAAGGCATACTACCTCAAAGTTATCTGCATACGAGGATCTGCAGACCATAAAATCGATGGGGTTCAGAGGGGAGGCTTTGGCTAGTATGACTTATGTTGGCCATGTTACCGTGACAACGATAACAGAAGGCCAATTGCACGGCTACAGGGTTTCTTACAGAGATGGTGTAATGGAGAATGAGCCTAAGCCTTGCGCTGCGGTGAAAGGAACTCAAGTCATGGTTGAAAATCTATTTTACAACATGGTAGCCCGCAAGAAAACATTGCAGAACTCCAATGATGACTACCCCAAGATCGTAGACTTCATCAGTCGGTTTGCAGTCCATCACATCAACGTTACCTTCTCTTGCAGAAAGCATGGAGCCAATAGAGCAGATGTTCATAGTGCAAGTACATCCTCAAGGTTAGATGCTATCAGGAGTGTCTATGGGGCTTCTGTCGTTCGTGATCTCATAG AATAAAGGTTTCATATGAGGATGCTGCAGATTCAATCTTCAAGATGGATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CF322775             [                                                                                                                                                                                                                                                                                                                                                            GATTTGGCAATATTGTGCGAAAGGCATACTACCTCAAAGTTATCTGCATACGAGGATCTGCAGACCATAAAATCGATGGGGTTCAGAGGGGAGGCTTTGGCTAGTATGACTTATGTTGGCCATGTTACCGTGACAACGATAACAGAAGGCCAATTGCACGGCTACAGGGTTTCTTACAGAGATGGTGTAATGGAGAATGAGCCTAAGCCTTGCGCTGCGGTGAAAGGAACTCAAGTCATGGTTGAAAATCTATTTTACAACATGGTAGCCCGCAAGAAAACATTGCAGAACTCCAATGATGACTACCCCAAGATCGTAGACTTCATCAGTCGGTTTGCAGTCCATCACATCAACGTTACCTTCTCTTGCAGAAAGCATGGAGCCAATAGAGCAGATGTTCATAGTGCAAGTACATCCTCAAGGTTAGATGCTATCAGGAGTGTCTATGGGGCTTCTGTCGTTCGTGATCTCATAGAAATAAAGGTTTCATATGAGGATGCTGCAGATTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]


>consensus_9128#0 CAGTCTCCTCTCCTCCTCCGCTCGAGCGAGTGAGTCCCGACCACGTCGCTGCCCTCGCCT CACCGCCGGCCAACCGCCGTGACGAGAGATCGAGCAGGGCGGGGCATGGACGAGCCTTCG CCGCGCGGAGGTGGGTGCGCCGGGGAGCCGCCCCGCATCCGGAGGTTGGAGGAGTCGGTG GTGAACCGCATCGCGGCGGGGGAGGTGATCCAGCGGCCGTCGTCGGCGGTGAAGGAGCTC ATCGAGAACAGCCTCGACGCTGGCGCCTCCAGCGTCTCCGTTGCGGTGAAGGACGGTGGC CTCAAGCTCATCCAGGTCTCCGATGACGGCCATGGCATCAGGTTTGAGGATTTGGCAATA TTGTGCGAAAGGCATACTACCTCAAAGTTATCTGCATACGAGGATCTGCAGACCATAAAA TCGATGGGGTTCAGAGGGGAGGCTTTGGCTAGTATGACTTATGTTGGCCATGTTACCGTG ACAACGATAACAGAAGGCCAATTGCACGGCTACAGGGTTTCTTACAGAGATGGTGTAATG GAGAATGAGCCTAAGCCTTGCGCTGCGGTGAAAGGAACTCAAGTCATGGTTGAAAATCTA TTTTACAACATGGTAGCCCGCAAGAAAACATTGCAGAACTCCAATGATGACTACCCCAAG ATCGTAGACTTCATCAGTCGGTTTGCAGTCCATCACATCAACGTTACCTTCTCTTGCAGA AAGCATGGAGCCAATAGAGCAGATGTTCATAGTGCAAGTACATCCTCAAGGTTAGATGCT ATCAGGAGTGTCTATGGGGCTTCTGTCGTTCGTGATCTCATAGAAATAAAGGTTTCATAT GAGGATGCTGCAGATTCAATCTTCAAGATGGATGGTTACATCTCAAATGCAAATTATGTG GCAAAGAAGATTACAATGATTCTTTTCATAAATGATAGGCTTGTAGACTGTACTGCTTTG AAAAGAGCTATTGAATTTGTGTACTCTGCAACATTGCCTCAAGCATCCAAACCTTTCATA TACATGTCCATACATCTTCCATCAGAACACGTGGATGTTAATATACACCCAACCAAGAAA GAGGTTAGCCTTTTGAATCAAGAGCGTATTATTGAAACAATAAGAAATGCTATTGAGGAA AAACTGATGAATTCTAATACAACCAGGATATTCCAAACTCAGGCATTAAACTTATCAGGG ATTGCTCAAGCTAACCCACAAAAGGATAAGGTTTCTGAGGCCAGTATGGGTTCTGGAACA AAATCTCAAAAAATTCCTGTGAGCCAAATGGTCAGAACAGATCCACGCAATCCATCTGGA AGATTGCACACCTACTGGCACGGGCAATCTTCAAATCTTGAAAAGAAATTTGATCTTGTA TCTGTAAGAAATGTTGTAAGATCAAGGAGAAACCAAAAAGATGCTGGTGATTTGTCAAGC CGTCATGAGCTCCTTGTGGAAATAGATTCTAGCTTCCATCCTGGCCTTTTGGACATTGTC AAGAACTGCACATATGTTGGACTTGCCGATGAAGCCTTTGCTTTGATACAACACAATACC CGCTTATACCTTGTAAATGTGGTAAATATTAGTAAAGAACTTATGTACCAGCAAGCTTTG TGCCGTTTTGGGAACTTCAATGCTATTCAGCTCAGTGAACCAGCTCCACTTCAGGAGTTG CTGGTGATGGCACTGAAAGACGATGAATTGATGAGTGATGAAAAGGATGATGAGAAACTG GAGATTGCAGAAGTAAACACTGAGATACTAAAAGAAAATGCTGAGATGATTAATGAGTAC TTTTCTATTCACATTGATCAAGATGGCAAATTGACAAGACTTCCTGTTGTACTGGACCAG TACACCCCTGATATGGACCGTCTTCCAGAATTTGTGTTGGCTTTAGGAAATGATGTTACT TGGGATGACGAGAAAGAGTGCTTCAGAACAGTAGCTTCTGCTGTAGGAAACTTCTATGCA CTTCATCCCCCAATCCTTCCAAATCCATCTGGGAATGGCATTCATTTATACAAGAAAAAT AGAGATTCAATGGCTGATGAACATGCTGAGAATGATCTAATATCAGATGAAAATGACGTT GATCAAGAACTTCTTGCGGAAGCAGAAGCAGCATGGGCCCAACGTGAGTGGACCATTCAG CATGTCTTGTTTCCATCCATGCGACTTTTCCTCAAGCCCCCGAAGTCAATGGCAACAGAT GGAACGTTTGTGCAGGTTGCTTCCTTGGAGAAACTCTACAAGATTTTTGAAAGGTGTTAG CTCATAAGTGAGAAAATGAAGGCAGAGTAAGATCATGATTCATGGAGTGTTTTTGAAAAT GTGTATAATTTCACCGTATTATGTACTTTGATAGTGTCTGTAGAAACTGAAGAAAGAAAG ATGGCTTTACTTCTGAATTGAAAGTTAACGATGCCAGCAATTGTATATTCTGATCAAACA TTGGCGTCTACTACTCTACTAGCAAGTGATCTTCCTTAGCTCCAGGTCGACAAGAATCAA GAATGTGTGTGTTGTACCCAATTTATTTAGCCAAAATGAAAAGGTATATTTTCTAAGTTC AAA



consensusID : consensus_9128#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 237
fasta sequence
                              [TAGCCCNTAAGTGAGAAAATGAAGGCAGAGTAAGATCATGANNCATGGAGTGTTTTTGAAAATGTGTATAATTTCNCCGTATTNTGTACTTTGATAGTGNCTGTAGAAACTGAAGAAANAAAGATGGCTTTACTTCTGAATTGAAAGTTAACGATGCCAGCAATTGTATATTCTGATCAAACATTGGCGTCTACTACTCTACTAGCAAGTGATCTTCCTTNAAAAAAAAAAAAAAAA]

[+] EMBL AU068376             [TAGCCCNTAAGTGAGAAAATGAAGGCAGAGTAAGATCATGANNCATGGAGTGTTTTTGAAAATGTGTATAATTTCNCCGTATTNTGTACTTTGATAGTGNCTGTAGAAACTGAAGAAANAAAGATGGCTTTACTTCTGAATTGAAAGTTAACGATGCCAGCAATTGTATATTCTGATCAAACATTGGCGTCTACTACTCTACTAGCAAGTGATCTTCCTTNAAAAAAAAAAAAAAAA]


>consensus_9128#1 TAGCCCNTAAGTGAGAAAATGAAGGCAGAGTAAGATCATGANNCATGGAGTGTTTTTGAA AATGTGTATAATTTCNCCGTATTNTGTACTTTGATAGTGNCTGTAGAAACTGAAGAAANA AAGATGGCTTTACTTCTGAATTGAAAGTTAACGATGCCAGCAATTGTATATTCTGATCAA ACATTGGCGTCTACTACTCTACTAGCAAGTGATCTTCCTTNAAAAAAAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9128#0      CAGTCTCCTCTCCTCCTCCGCTCGAGCGAGTGAGTCCCGACCACGTCGCTGCCCTCGCCT 60
consensus_9128#1      ------------------------------------------------------------
                                                                                  

consensus_9128#0      CACCGCCGGCCAACCGCCGTGACGAGAGATCGAGCAGGGCGGGGCATGGACGAGCCTTCG 120
consensus_9128#1      ------------------------------------------------------------
                                                                                  

consensus_9128#0      CCGCGCGGAGGTGGGTGCGCCGGGGAGCCGCCCCGCATCCGGAGGTTGGAGGAGTCGGTG 180
consensus_9128#1      ------------------------------------------------------------
                                                                                  

consensus_9128#0      GTGAACCGCATCGCGGCGGGGGAGGTGATCCAGCGGCCGTCGTCGGCGGTGAAGGAGCTC 240
consensus_9128#1      ------------------------------------------------------------
                                                                                  

consensus_9128#0      ATCGAGAACAGCCTCGACGCTGGCGCCTCCAGCGTCTCCGTTGCGGTGAAGGACGGTGGC 300
consensus_9128#1      ------------------------------------------------------------
                                                                                  

consensus_9128#0      CTCAAGCTCATCCAGGTCTCCGATGACGGCCATGGCATCAGGTTTGAGGATTTGGCAATA 360
consensus_9128#1      ------------------------------------------------------------
                                                                                  

consensus_9128#0      TTGTGCGAAAGGCATACTACCTCAAAGTTATCTGCATACGAGGATCTGCAGACCATAAAA 420
consensus_9128#1      ------------------------------------------------------------
                                                                                  

consensus_9128#0      TCGATGGGGTTCAGAGGGGAGGCTTTGGCTAGTATGACTTATGTTGGCCATGTTACCGTG 480
consensus_9128#1      ------------------------------------------------------------
                                                                                  

consensus_9128#0      ACAACGATAACAGAAGGCCAATTGCACGGCTACAGGGTTTCTTACAGAGATGGTGTAATG 540
consensus_9128#1      ------------------------------------------------------------
                                                                                  

consensus_9128#0      GAGAATGAGCCTAAGCCTTGCGCTGCGGTGAAAGGAACTCAAGTCATGGTTGAAAATCTA 600
consensus_9128#1      ------------------------------------------------------------
                                                                                  

consensus_9128#0      TTTTACAACATGGTAGCCCGCAAGAAAACATTGCAGAACTCCAATGATGACTACCCCAAG 660
consensus_9128#1      ------------------------------------------------------------
                                                                                  

consensus_9128#0      ATCGTAGACTTCATCAGTCGGTTTGCAGTCCATCACATCAACGTTACCTTCTCTTGCAGA 720
consensus_9128#1      ------------------------------------------------------------
                                                                                  

consensus_9128#0      AAGCATGGAGCCAATAGAGCAGATGTTCATAGTGCAAGTACATCCTCAAGGTTAGATGCT 780
consensus_9128#1      ------------------------------------------------------------
                                                                                  

consensus_9128#0      ATCAGGAGTGTCTATGGGGCTTCTGTCGTTCGTGATCTCATAGAAATAAAGGTTTCATAT 840
consensus_9128#1      ------------------------------------------------------------
                                                                                  

consensus_9128#0      GAGGATGCTGCAGATTCAATCTTCAAGATGGATGGTTACATCTCAAATGCAAATTATGTG 900
consensus_9128#1      ------------------------------------------------------------
                                                                                  

consensus_9128#0      GCAAAGAAGATTACAATGATTCTTTTCATAAATGATAGGCTTGTAGACTGTACTGCTTTG 960
consensus_9128#1      ------------------------------------------------------------
                                                                                  

consensus_9128#0      AAAAGAGCTATTGAATTTGTGTACTCTGCAACATTGCCTCAAGCATCCAAACCTTTCATA 1020
consensus_9128#1      ------------------------------------------------------------
                                                                                  

consensus_9128#0      TACATGTCCATACATCTTCCATCAGAACACGTGGATGTTAATATACACCCAACCAAGAAA 1080
consensus_9128#1      ------------------------------------------------------------
                                                                                  

consensus_9128#0      GAGGTTAGCCTTTTGAATCAAGAGCGTATTATTGAAACAATAAGAAATGCTATTGAGGAA 1140
consensus_9128#1      ------------------------------------------------------------
                                                                                  

consensus_9128#0      AAACTGATGAATTCTAATACAACCAGGATATTCCAAACTCAGGCATTAAACTTATCAGGG 1200
consensus_9128#1      ------------------------------------------------------------
                                                                                  

consensus_9128#0      ATTGCTCAAGCTAACCCACAAAAGGATAAGGTTTCTGAGGCCAGTATGGGTTCTGGAACA 1260
consensus_9128#1      ------------------------------------------------------------
                                                                                  

consensus_9128#0      AAATCTCAAAAAATTCCTGTGAGCCAAATGGTCAGAACAGATCCACGCAATCCATCTGGA 1320
consensus_9128#1      ------------------------------------------------------------
                                                                                  

consensus_9128#0      AGATTGCACACCTACTGGCACGGGCAATCTTCAAATCTTGAAAAGAAATTTGATCTTGTA 1380
consensus_9128#1      ------------------------------------------------------------
                                                                                  

consensus_9128#0      TCTGTAAGAAATGTTGTAAGATCAAGGAGAAACCAAAAAGATGCTGGTGATTTGTCAAGC 1440
consensus_9128#1      ------------------------------------------------------------
                                                                                  

consensus_9128#0      CGTCATGAGCTCCTTGTGGAAATAGATTCTAGCTTCCATCCTGGCCTTTTGGACATTGTC 1500
consensus_9128#1      ------------------------------------------------------------
                                                                                  

consensus_9128#0      AAGAACTGCACATATGTTGGACTTGCCGATGAAGCCTTTGCTTTGATACAACACAATACC 1560
consensus_9128#1      ------------------------------------------------------------
                                                                                  

consensus_9128#0      CGCTTATACCTTGTAAATGTGGTAAATATTAGTAAAGAACTTATGTACCAGCAAGCTTTG 1620
consensus_9128#1      ------------------------------------------------------------
                                                                                  

consensus_9128#0      TGCCGTTTTGGGAACTTCAATGCTATTCAGCTCAGTGAACCAGCTCCACTTCAGGAGTTG 1680
consensus_9128#1      ------------------------------------------------------------
                                                                                  

consensus_9128#0      CTGGTGATGGCACTGAAAGACGATGAATTGATGAGTGATGAAAAGGATGATGAGAAACTG 1740
consensus_9128#1      ------------------------------------------------------------
                                                                                  

consensus_9128#0      GAGATTGCAGAAGTAAACACTGAGATACTAAAAGAAAATGCTGAGATGATTAATGAGTAC 1800
consensus_9128#1      ------------------------------------------------------------
                                                                                  

consensus_9128#0      TTTTCTATTCACATTGATCAAGATGGCAAATTGACAAGACTTCCTGTTGTACTGGACCAG 1860
consensus_9128#1      ------------------------------------------------------------
                                                                                  

consensus_9128#0      TACACCCCTGATATGGACCGTCTTCCAGAATTTGTGTTGGCTTTAGGAAATGATGTTACT 1920
consensus_9128#1      ------------------------------------------------------------
                                                                                  

consensus_9128#0      TGGGATGACGAGAAAGAGTGCTTCAGAACAGTAGCTTCTGCTGTAGGAAACTTCTATGCA 1980
consensus_9128#1      ------------------------------------------------------------
                                                                                  

consensus_9128#0      CTTCATCCCCCAATCCTTCCAAATCCATCTGGGAATGGCATTCATTTATACAAGAAAAAT 2040
consensus_9128#1      ------------------------------------------------------------
                                                                                  

consensus_9128#0      AGAGATTCAATGGCTGATGAACATGCTGAGAATGATCTAATATCAGATGAAAATGACGTT 2100
consensus_9128#1      ------------------------------------------------------------
                                                                                  

consensus_9128#0      GATCAAGAACTTCTTGCGGAAGCAGAAGCAGCATGGGCCCAACGTGAGTGGACCATTCAG 2160
consensus_9128#1      ------------------------------------------------------------
                                                                                  

consensus_9128#0      CATGTCTTGTTTCCATCCATGCGACTTTTCCTCAAGCCCCCGAAGTCAATGGCAACAGAT 2220
consensus_9128#1      ------------------------------------------------------------
                                                                                  

consensus_9128#0      GGAACGTTTGTGCAGGTTGCTTCCTTGGAGAAACTCTACAAGATTTTTGAAAGGTGTTAG 2280
consensus_9128#1      ---------------------------------------------------------TAG 3
                                                                               ***

consensus_9128#0      CTCATAAGTGAGAAAATGAAGGCAGAGTAAGATCATGATTCATGGAGTGTTTTTGAAAAT 2340
consensus_9128#1      CCCNTAAGTGAGAAAATGAAGGCAGAGTAAGATCATGANNCATGGAGTGTTTTTGAAAAT 63
                      * * **********************************  ********************

consensus_9128#0      GTGTATAATTTCACCGTATTATGTACTTTGATAGTGTCTGTAGAAACTGAAGAAAGAAAG 2400
consensus_9128#1      GTGTATAATTTCNCCGTATTNTGTACTTTGATAGTGNCTGTAGAAACTGAAGAAANAAAG 123
                      ************ ******* *************** ****************** ****

consensus_9128#0      ATGGCTTTACTTCTGAATTGAAAGTTAACGATGCCAGCAATTGTATATTCTGATCAAACA 2460
consensus_9128#1      ATGGCTTTACTTCTGAATTGAAAGTTAACGATGCCAGCAATTGTATATTCTGATCAAACA 183
                      ************************************************************

consensus_9128#0      TTGGCGTCTACTACTCTACTAGCAAGTGATCTTCCTTAGCTCCAGGTCGACAAGAATCAA 2520
consensus_9128#1      TTGGCGTCTACTACTCTACTAGCAAGTGATCTTCCTTNAAAAAAAAAAAAAAAA------ 237
                      *************************************      *     * **       

consensus_9128#0      GAATGTGTGTGTTGTACCCAATTTATTTAGCCAAAATGAAAAGGTATATTTTCTAAGTTC 2580
consensus_9128#1      ------------------------------------------------------------
                                                                                  

consensus_9128#0      AAA 2583
consensus_9128#1      ---
                         




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)