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Oryza sativa
cluster # 9162 cluster # 9162       Sequences # 6       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9162#0 length = 2398 sequences # 6  

consensusID : consensus_9162#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 2398
fasta sequence
                              [ATTCGCGAAGCCGCACAACACAACGCAACGCCGCGCTTCCGCCTCTCCACCCGCCGCCGCCTCCCTCGCCGGCTTGCCGCCGCCGCCGCGGTCGCGAGGCGGAGACCTTGCGGGACGATCGGAGCGACGTCCCTCTACACCCCTCCCCCTCCGCAGCGGCGAGAAGAACAAGGGGGCCGCCCGCCATGCTGCGCCGGTGCGTGCGGGATCTGTACCCGCTGCGGCCTCTTAGGAGGATCCCTAGGCCGATCTCCAGCGAGGTCCCAAGTCCAGCATTTCTTCGACCCAGAAGCAAGTCGACAAAAGCTTCCCAACAGAGTTCAACACAGAATACTGTCCCTGGCCCTCAAGGAGAACCTTCTCAGTCAGGAAGCAATGTTCCGAAAGTTCTGCTTGGAACTCTGATGGTCGGCGCTGCTGCTATGGCTGCTTATCAAGCTGGCTACATAGACGATCAATTTAAGGATATAATATTTCCCTCTACAATGAAGGAAAAAAATATCAGAAAGATATACGATGATCTGAAGGCTCCTTCTGAACAAAAAGTTGATGAGAAGCAAGTAGTATCAGATCCAAATGTTGACATTGTTCAGAACAGTAACAACGAGGCTCATCCTCAAAAGGACCTTCCAACTGAAGGGATGGGTCCACCAGAAATTCCAACCACTGATGAGCAGACTGTTTCCTCTGAAGAAAAGGAAAAAGAAACCCTTGCCCAGGGGACACCGCAAATTCCAGATGAACATGGAGCTGCTGCTAAACCACTGTCCCAAGATATTCCTGTTATTGACATAAATCCAAGTGTTGATGATAAGGCAACAGGAGAAGTTCTTCCTGAACAAACTGACAAGACAACCACTTCAGTTTCTCCGGTACAATCGAGCCTAGCAACAGCAGGTCCTTCCCATCATGTACACACAGATACAGATGGACCAAAGGATCCATCAAGCGCTGGTGCAGTTGAACATAAATCTCTGGCTGAGACATATTTACTACAAGAACCTGATAATTCTAAAGACATGGGTGCTAAGGAAAGTAAACACGATGGTGTTATTAGTACGGGAACTTCTGATGATGGGAAAATTGTACTTGATATCATAGAGGCTATTCATGCTGCTGAAAGAAAGCAGGCAGATGCAGATGCTTACATGTATTCAGAAGAGAAAAGGAAGTTGAAGGAGAAATATGAAAAGGAGCTGAAGGACACCAGGGCTCGGGAGCTCATGTATGCTGAAGAGGCAGCAATTCTGGACAAGGAGCTGAAGAAAGAGAAATTGAAGTCAGCTGCTGTGATTAAGGAACTGCAAGAAAATGCTGAACAAAAGCTAAGGGATGAGCTGCAGCAGAAGGATGAGGAAACAAGTCAACAAGTTGAGAAGGTTCGCGAGTTAGCAAAGGCTGAGCTTGCTGCAGCTCTTGCAAAAGAGAGAGCATCCCAGATCGAACAGATTGCTGAAGCAAATCTCAATATAGATGCTTTGTGCATGGCGTTTTATGCACGATCTGAAGAAACTCGGCAGAGTCATTCGGTTCATAAGCTTGCTCTGGGTACTCTTGCTTTGGAAGATGCTCTATCCACTGGATCACCAATCCGGACAGAGGTGGATCAATTGCGCAAATCTCTTGAAGGTATTGATAAGGACTCACTGTTAGAATTGGCTCTTTCATCAATTCCAGAAGATGTTCTCGAGTACGGATCAGATACCCCTATGGATTTGAAACAAAAGTTTAATTCCTTGAAGGAAACAGTCAGGCATTTCAGCCTTATACCAGCGGGTGGTGGTGGTATGCTGACTCATGCTGTTGCTCATGTGGCTTCATCCATTAAGATCAAAGAGGACCAATCTGGAGACGGAATTGAGTCTCTTCTAAACAGAGTGGAGAACTTGATTATACATGGAGACTTGAGTGCAGCAGCGGAGGCCTTGGAAAGAGGGTTACAAGGGAGTGAAGCAGCAGAAATAGCTAGCGAGTGGGTGAAGCAGGCAAGGAAACGTGCAATAGCAGAGCAGACGCTTACTCTCCTCCATTCTTATGCTTCTTCCATCACATTCTCGTGATTTTGTTCATCAATGTAGTATTCAACAAGATCTGCGAGTTACAGACTTACGTTACTCAGTCCAATCACAAATATCTTAAGACCATATTGCAAATACCTGAATATATAGGAGCCAGAGCCATTCCTGTCAGGCGGCTGCTGAACTTTCCTCCTTTTAACAGAGCTAATAATTTTTGGCATGTAGCTACAAGCTACTTGGCATTCTTGATGTTTTAGTCGCCAGTTGAGGCACAATTTGGATAGAATTGCCGATTTTGCTGCGGATGTAAATTTTCTTCTGTACAATGATGATGATTTTCGGGGGTCGAGTTTATGAAATCAGAAATCCTGATGCAAAAA]

[+] EMBL AK111077             [ATTCGCGAAGCCGCACAACACAACGCAACGCCGCGCTTCCGCCTCTCCACCCGCCGCCGCCTCCCTCGCCGGCTTGCCGCCGCCGCCGCGGTCGCGAGGCGGAGACCTTGCGGGACGATCGGAGCGACGTCCCTCTACACCCCTCCCCCTCCGCAGCGGCGAGAAGAACAAGGGGGCCGCCCGCCATGCTGCGCCGGTGCGTGCGGGATCTGTACCCGCTGCGGCCTCTTAGGAGGATCCCTAGGCCGATCTCCAGCGAGGTCCCAAGTCCAGCATTTCTTCGACCCAGAAGCAAGTCGACAAAAGCTTCCCAACAGAGTTCAACACAGAATACTGTCCCTGGCCCTCAAGGAGAACCTTCTCAGTCAGGAAGCAATGTTCCGAAAGTTCTGCTTGGAACTCTGATGGTCGGCGCTGCTGCTATGGCTGCTTATCAAGCTGGCTACATAGACGATCAATTTAAGGATATAATATTTCCCTCTACAATGAAGGAAAAAAATATCAGAAAGATATACGATGATCTGAAGGCTCCTTCTGAACAAAAAGTTGATGAGAAGCAAGTAGTATCAGATCCAAATGTTGACATTGTTCAGAACAGTAACAACGAGGCTCATCCTCAAAAGGACCTTCCAACTGAAGGGATGGGTCCACCAGAAATTCCAACCACTGATGAGCAGACT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL AK073550             [        AGCCGCACAACACAACGCAACGCCGCGCTTCCGCCTCTCCACCCGCCGCCGCCTCCCTCGCCGGCTTGCCGCCGCCGCCGCGGTCGCGAGGCGGAGACCTTGCGGGACGATCGGAGCGACGTCCCTCTACACCCCTCCCCCTCCGCAACGGCGAGAAGAACAAGGGGGCCGCCCGCCATGCTGCGCCGGTGCGTGCGGGATCTGTACCCGCTGCGGCCTCTTAGGAGGATCCCTAGGCCGATCTCCAGCGAGGTCCCAAGTCCAGCATTTCTTCGACCCAGAAGCAAGTCGACAAAAGCTTCCCAACAGAGTTCAACACAGAATACTGTCCCTGGCCCTCAAGGAGAACCTTCTCAGTCAGGAAGCAATGTTCCGAAAGTTCTGCTTGGAACTCTGATGGTCGGCGCTGCTGCTATGGCTGCTTATCAAGCTGGCTACATAGACGATCAATTTAAGGATATAATATTTCCCTCTACAATGAAGGAAAAAAATATCAGAAAGATATACGATGATCTGAAGGCTCCTTCTGAACAAAAAGTTGATGAGAAGCAAGTAGTATCAGATCCAAATGTTGACATTGTTCAGAACAGTAACAACGAGGCTCATCCTCAAAAGGACCTTCCAACTGAAGGGATGGGTCCACCAGAAATTCCAACCACTGATGAGCAGACTGTTTCCTCTGAAGAAAAGGAAAAAGAAACCCTTGCCCAGGGGACACCGCAAATTCCAGATGAACATGGAGCTGCTGCTAAACCACTGTCCCAAGATATTCCTGTTATTGACATAAATCCAAGTGTTGATGATAAGGCAACAGGAGAAGTTCTTCCTGAACAAACTGACAAGACAACCACTTCAGTTTCTCCGGTACAATCGAGCCTAGCAACAGCAGGTCCTTCCCATCATGTACACACAGATACAGATGGACCAAAGGATCCATCAAGCGCTGGTGCAGTTGAACATAAATCTCTGGCTGAGACATATTTACTACAAGAACCTGATAATTCTAAAGACATGGGTGCTAAGGAAAGTAAACACGATGGTGTTATTAGTACGGGAACTTCTGATGATGGGAAAATTGTACTTGATATCATAGAGGCTATTCATGCTGCTGAAAGAAAGCAGGCAGATGCAGATGCTTACATGTATTCAGAAGAGAAAAGGAAGTTGAAGGAGAAATATGAAAAGGAGCTGAAGGACACCAGGGCTCGGGAGCTCATGTATGCTGAAGAGGCAGCAATTCTGGACAAGGAGCTGAAGAAAGAGAAATTGAAGTCAGCTGCTGTGATTAAGGAACTGCAAGAAAATGCTGAACAAAAGCTAAGGGATGAGCTGCAGCAGAAGGATGAGGAAACAAGTCAACAAGTTGAGAAGGTTCGCGAGTTAGCAAAGGCTGAGCTTGCTGCAGCTCTTGCAAAAGAGAGAGCATCCCAGATCGAACAGATTGCTGAAGCAAATCTCAATATAGATGCTTTGTGCATGGCGTTTTATGCACGATCTGAAGAAACTCGGCAGAGTCATCCGGTTCATAAGCTTGCTCTGGGTACTCTTGCTTTGGAAGATGCTCTATCCACTGGATCACCAATCCGGACAGAGGTGGATCAATTGCGCAAATCTCTTGAAGGTATTGATAAGGACTCACTGTTAGAATTGGCTCTTTCATCAATTCCAGAAGATGTTCTCGAGTACGGATCAGATACCCCTATGGATTTGAAACAAAAGTTTAATTCCTTGAAGGAAACAGTCAGGCATTTCAGCCTTATACCAGCGGGTGGTGGTGGTATGCTGACTCATGCTGTTGCTCATGTGGCTTCATCCATTAAGATCAAAGAGGACCAATCTGGAGACGGAATTGAGTCTCTTCTAAACAGAGTGGAGAACTTGATTATACATGGAGACTTGAGTGCAGCAGCGGAGGCCTTGGAAAGAGGGTTACAAGGGAGTGAAGCAGCAGAAATAGCTAGCGAGTGGGTGAAGCAGGCAAGGAAACGTGCAATAGCAGAGCAGACGCTTACTCTCCTCCATTCTTATGCTTCTTCCATCACATTCTCGTGATTTTGTTCATCAATGTAGTATTCAACAAGATCTGCGAGTTACAGACTTACGTTACTCAGTCCAATCACAAATATCTTAAGACCATATTGCAAATACCTGAATATATAGGAGCCAGAGCCATTCCTGTCAGGCGGCTGCTGAACTTTCCTCCTTTTAACAGAGCTAATAATTTTTGGCATGTAGCTACAAGCTACTTGGCATTCTTGATGTTTTAGTCGCCAGTTGAGGCACAATTTGGATAGAATTGCCGATTTTGCTGCGGATGTAAATTTTCTTCTGTACAATGATGATGATTTTCGGGGGTCGAGTTTATGAAATCAGAAATCCT          ]
[+] EMBL C26718               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ntngnGGTCCACCAGAAATTCCAACCACTGATGAGCAGACTGTTTCCTCTGAAGAAAAGGAAAAAGAAACCCTTGCCCAGGGGACACCGCAAATTCCAGATGAACATGGAGCTGCTGCTAAACCACTGTCCCAAGATATTCCTGTTATTGACATAAATCCAAGTNTTGATGATAAGGCAACAGGAGAAGTTCTTCCTGAACAAACTGACAAGACAACCACTTCAGTTTCTCCGGTACAATCGAGCCTAGCAACAGCAGGTCCTTCCCATCATGTACACACAGATACAGATGGACCAAAGGATCCATCAAGCGCTGGTGCAGTTGAACATAAATCTCTGGCTGAGACATATTTACTACAAGACCTTGNTAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL BP184680             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ATGGTGTTATTAGTACGGGAACTTCTGATGATGGGAAAATTGTACTTGATATCATAGAGGCTATTCATGCTGCTGAAAGAAAGCAGGCAGATGCAGATGCTTACATGTATTCAGAAGAGAAAAGGAAGTTGAAGGAGAAATATGAAAAGGAGCTGAAGGACACCAGGGCTCGGGAGCTCATGTATGCTGAAGAGGCAGCAATTCTGGACAAGGAGCTGAAGAAAGAGAAATTGAAGTCAGCTGCTGTGATTAAGGAACTGCAAGAAAATGCTGAACAAAAGCTAAGGGATGAGCTGCAGCAGAAGGATGAGGAAACAAGTCAACAAGTTGAGAAGGTTCGCGAGTTAGCAAAGGCTGAGCTTGCTGCAGCTCTTGCAAAAGAGAGAGCATCCCAGATCGAACAGATTGCTGAAGCAAATCTCAATATAGATGCTTTGTGCATGGCGTTTTATGCACGATCTGAAGAAACTCGGCAGAGTCATTCGGTTCATAAGCTTGCTCTGGGTACTCTTGCTTTGGAAGATGCTCTATCCACTGGATCACCAATCCGGACAGAGGTGGATCAATTGCGCAAATCTCTTGAAGGTATTGATAAGGACTCACTGTTAGAATTGGCTCTTTCATCAATTCCAGAAGATGTTCTCGAGTACGGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CF324916             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             AACAAGTCAACAAGTTGAGAAGGTTCGCGAGTTAGCAAAGGCTGAGCTTGCTGCAGCTCTTGCAAAAGAGAGAGCATCCCAGATCGAACAGATTGCTGAAGCAAATCTCAATATAGATGCTTTGTGCATGGCGTTTTATGCACGATCTGAAGAAACTCGGCAGAGTCATTCGGTTCATAAGCTTGCTCTGGGTACTCTTGCTTTGGAAGATGCTCTATCCACTGGATCACCAATCCGGACAGAGGTGGATCAATTGCGCAAATCTCTTGAAGGTATTGATAAGGACTCACTGTTAGAATTGGCTCTTTCATCAATTCCAGAAGATGTTCTCGAGTACGGATCAGATACCCCTATGGATTTGAAACAAAAGTTTAATTCCTTGAAGGAAACAGTCAGGCATTTCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL AU082869             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          GACGGAATTGAGTCTCTTCTAAACAGAGTGGAGAACTTGATTATACNTGGAGACTTGAGTGCAGCAGCGGAGGCCTTGGAAAGAGGGTTACAAGGGAGTGAAGCAGCAGAAATAGCTAGCGAGTGGGTGAAGCAGGCAAGGAAACGTGCAATNGCAGAGCAGACGCTTACTCTCCTCCATTCTTATGCTTCTTCCATCACATTCTCGTGATTTTGTTCATCNATGTAGTATTCAACAAGATCTGCGAGTTACAGACTTACGTTACTCAGTCCAATCACAAATNTCTTAAGNCCATATTGCAAATACCTGAATATATAGGAGCCAGAGCCATTCCTGTCAGGCGGCTGCTGAACTTTCCTCCTTTTAACAGAGCTAATAATTTTTGGCATGTAGCTACAAGCTACTTGGCATTCTTGATGTTTTAGTCGCCAGTTGAGGCACAATTTGGATAGAATTGCCGATTTTGCTGCGGATGTAAATTTTCTTCTGTACAATGATGATGATTTTCGGGGGTCGAGTTTATGAAATCAGAAATCCTGATGCAAAAA]


>consensus_9162#0 ATTCGCGAAGCCGCACAACACAACGCAACGCCGCGCTTCCGCCTCTCCACCCGCCGCCGC CTCCCTCGCCGGCTTGCCGCCGCCGCCGCGGTCGCGAGGCGGAGACCTTGCGGGACGATC GGAGCGACGTCCCTCTACACCCCTCCCCCTCCGCAGCGGCGAGAAGAACAAGGGGGCCGC CCGCCATGCTGCGCCGGTGCGTGCGGGATCTGTACCCGCTGCGGCCTCTTAGGAGGATCC CTAGGCCGATCTCCAGCGAGGTCCCAAGTCCAGCATTTCTTCGACCCAGAAGCAAGTCGA CAAAAGCTTCCCAACAGAGTTCAACACAGAATACTGTCCCTGGCCCTCAAGGAGAACCTT CTCAGTCAGGAAGCAATGTTCCGAAAGTTCTGCTTGGAACTCTGATGGTCGGCGCTGCTG CTATGGCTGCTTATCAAGCTGGCTACATAGACGATCAATTTAAGGATATAATATTTCCCT CTACAATGAAGGAAAAAAATATCAGAAAGATATACGATGATCTGAAGGCTCCTTCTGAAC AAAAAGTTGATGAGAAGCAAGTAGTATCAGATCCAAATGTTGACATTGTTCAGAACAGTA ACAACGAGGCTCATCCTCAAAAGGACCTTCCAACTGAAGGGATGGGTCCACCAGAAATTC CAACCACTGATGAGCAGACTGTTTCCTCTGAAGAAAAGGAAAAAGAAACCCTTGCCCAGG GGACACCGCAAATTCCAGATGAACATGGAGCTGCTGCTAAACCACTGTCCCAAGATATTC CTGTTATTGACATAAATCCAAGTGTTGATGATAAGGCAACAGGAGAAGTTCTTCCTGAAC AAACTGACAAGACAACCACTTCAGTTTCTCCGGTACAATCGAGCCTAGCAACAGCAGGTC CTTCCCATCATGTACACACAGATACAGATGGACCAAAGGATCCATCAAGCGCTGGTGCAG TTGAACATAAATCTCTGGCTGAGACATATTTACTACAAGAACCTGATAATTCTAAAGACA TGGGTGCTAAGGAAAGTAAACACGATGGTGTTATTAGTACGGGAACTTCTGATGATGGGA AAATTGTACTTGATATCATAGAGGCTATTCATGCTGCTGAAAGAAAGCAGGCAGATGCAG ATGCTTACATGTATTCAGAAGAGAAAAGGAAGTTGAAGGAGAAATATGAAAAGGAGCTGA AGGACACCAGGGCTCGGGAGCTCATGTATGCTGAAGAGGCAGCAATTCTGGACAAGGAGC TGAAGAAAGAGAAATTGAAGTCAGCTGCTGTGATTAAGGAACTGCAAGAAAATGCTGAAC AAAAGCTAAGGGATGAGCTGCAGCAGAAGGATGAGGAAACAAGTCAACAAGTTGAGAAGG TTCGCGAGTTAGCAAAGGCTGAGCTTGCTGCAGCTCTTGCAAAAGAGAGAGCATCCCAGA TCGAACAGATTGCTGAAGCAAATCTCAATATAGATGCTTTGTGCATGGCGTTTTATGCAC GATCTGAAGAAACTCGGCAGAGTCATTCGGTTCATAAGCTTGCTCTGGGTACTCTTGCTT TGGAAGATGCTCTATCCACTGGATCACCAATCCGGACAGAGGTGGATCAATTGCGCAAAT CTCTTGAAGGTATTGATAAGGACTCACTGTTAGAATTGGCTCTTTCATCAATTCCAGAAG ATGTTCTCGAGTACGGATCAGATACCCCTATGGATTTGAAACAAAAGTTTAATTCCTTGA AGGAAACAGTCAGGCATTTCAGCCTTATACCAGCGGGTGGTGGTGGTATGCTGACTCATG CTGTTGCTCATGTGGCTTCATCCATTAAGATCAAAGAGGACCAATCTGGAGACGGAATTG AGTCTCTTCTAAACAGAGTGGAGAACTTGATTATACATGGAGACTTGAGTGCAGCAGCGG AGGCCTTGGAAAGAGGGTTACAAGGGAGTGAAGCAGCAGAAATAGCTAGCGAGTGGGTGA AGCAGGCAAGGAAACGTGCAATAGCAGAGCAGACGCTTACTCTCCTCCATTCTTATGCTT CTTCCATCACATTCTCGTGATTTTGTTCATCAATGTAGTATTCAACAAGATCTGCGAGTT ACAGACTTACGTTACTCAGTCCAATCACAAATATCTTAAGACCATATTGCAAATACCTGA ATATATAGGAGCCAGAGCCATTCCTGTCAGGCGGCTGCTGAACTTTCCTCCTTTTAACAG AGCTAATAATTTTTGGCATGTAGCTACAAGCTACTTGGCATTCTTGATGTTTTAGTCGCC AGTTGAGGCACAATTTGGATAGAATTGCCGATTTTGCTGCGGATGTAAATTTTCTTCTGT ACAATGATGATGATTTTCGGGGGTCGAGTTTATGAAATCAGAAATCCTGATGCAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)