cluster # 9162

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Oryza sativa
cluster # 9162 cluster # 9162 Sequences # 6 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9162#0 length = 2398 sequences # 6
consensusID : consensus_9162#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 2398
fasta sequence
                              [ATTCGCGAAGCCGCACAACACAACGCAACGCCGCGCTTCCGCCTCTCCACCCGCCGCCGCCTCCCTCGCCGGCTTGCCGCCGCCGCCGCGGTCGCGAGGCGGAGACCTTGCGGGACGATCGGAGCGACGTCCCTCTACACCCCTCCCCCTCCGCAGCGGCGAGAAGAACAAGGGGGCCGCCCGCCATGCTGCGCCGGTGCGTGCGGGATCTGTACCCGCTGCGGCCTCTTAGGAGGATCCCTAGGCCGATCTCCAGCGAGGTCCCAAGTCCAGCATTTCTTCGACCCAGAAGCAAGTCGACAAAAGCTTCCCAACAGAGTTCAACACAGAATACTGTCCCTGGCCCTCAAGGAGAACCTTCTCAGTCAGGAAGCAATGTTCCGAAAGTTCTGCTTGGAACTCTGATGGTCGGCGCTGCTGCTATGGCTGCTTATCAAGCTGGCTACATAGACGATCAATTTAAGGATATAATATTTCCCTCTACAATGAAGGAAAAAAATATCAGAAAGATATACGATGATCTGAAGGCTCCTTCTGAACAAAAAGTTGATGAGAAGCAAGTAGTATCAGATCCAAATGTTGACATTGTTCAGAACAGTAACAACGAGGCTCATCCTCAAAAGGACCTTCCAACTGAAGGGATGGGTCCACCAGAAATTCCAACCACTGATGAGCAGACTGTTTCCTCTGAAGAAAAGGAAAAAGAAACCCTTGCCCAGGGGACACCGCAAATTCCAGATGAACATGGAGCTGCTGCTAAACCACTGTCCCAAGATATTCCTGTTATTGACATAAATCCAAGTGTTGATGATAAGGCAACAGGAGAAGTTCTTCCTGAACAAACTGACAAGACAACCACTTCAGTTTCTCCGGTACAATCGAGCCTAGCAACAGCAGGTCCTTCCCATCATGTACACACAGATACAGATGGACCAAAGGATCCATCAAGCGCTGGTGCAGTTGAACATAAATCTCTGGCTGAGACATATTTACTACAAGAACCTGATAATTCTAAAGACATGGGTGCTAAGGAAAGTAAACACGATGGTGTTATTAGTACGGGAACTTCTGATGATGGGAAAATTGTACTTGATATCATAGAGGCTATTCATGCTGCTGAAAGAAAGCAGGCAGATGCAGATGCTTACATGTATTCAGAAGAGAAAAGGAAGTTGAAGGAGAAATATGAAAAGGAGCTGAAGGACACCAGGGCTCGGGAGCTCATGTATGCTGAAGAGGCAGCAATTCTGGACAAGGAGCTGAAGAAAGAGAAATTGAAGTCAGCTGCTGTGATTAAGGAACTGCAAGAAAATGCTGAACAAAAGCTAAGGGATGAGCTGCAGCAGAAGGATGAGGAAACAAGTCAACAAGTTGAGAAGGTTCGCGAGTTAGCAAAGGCTGAGCTTGCTGCAGCTCTTGCAAAAGAGAGAGCATCCCAGATCGAACAGATTGCTGAAGCAAATCTCAATATAGATGCTTTGTGCATGGCGTTTTATGCACGATCTGAAGAAACTCGGCAGAGTCATTCGGTTCATAAGCTTGCTCTGGGTACTCTTGCTTTGGAAGATGCTCTATCCACTGGATCACCAATCCGGACAGAGGTGGATCAATTGCGCAAATCTCTTGAAGGTATTGATAAGGACTCACTGTTAGAATTGGCTCTTTCATCAATTCCAGAAGATGTTCTCGAGTACGGATCAGATACCCCTATGGATTTGAAACAAAAGTTTAATTCCTTGAAGGAAACAGTCAGGCATTTCAGCCTTATACCAGCGGGTGGTGGTGGTATGCTGACTCATGCTGTTGCTCATGTGGCTTCATCCATTAAGATCAAAGAGGACCAATCTGGAGACGGAATTGAGTCTCTTCTAAACAGAGTGGAGAACTTGATTATACATGGAGACTTGAGTGCAGCAGCGGAGGCCTTGGAAAGAGGGTTACAAGGGAGTGAAGCAGCAGAAATAGCTAGCGAGTGGGTGAAGCAGGCAAGGAAACGTGCAATAGCAGAGCAGACGCTTACTCTCCTCCATTCTTATGCTTCTTCCATCACATTCTCGTGATTTTGTTCATCAATGTAGTATTCAACAAGATCTGCGAGTTACAGACTTACGTTACTCAGTCCAATCACAAATATCTTAAGACCATATTGCAAATACCTGAATATATAGGAGCCAGAGCCATTCCTGTCAGGCGGCTGCTGAACTTTCCTCCTTTTAACAGAGCTAATAATTTTTGGCATGTAGCTACAAGCTACTTGGCATTCTTGATGTTTTAGTCGCCAGTTGAGGCACAATTTGGATAGAATTGCCGATTTTGCTGCGGATGTAAATTTTCTTCTGTACAATGATGATGATTTTCGGGGGTCGAGTTTATGAAATCAGAAATCCTGATGCAAAAA]

[+] EMBL AK111077             [ATTCGCGAAGCCGCACAACACAACGCAACGCCGCGCTTCCGCCTCTCCACCCGCCGCCGCCTCCCTCGCCGGCTTGCCGCCGCCGCCGCGGTCGCGAGGCGGAGACCTTGCGGGACGATCGGAGCGACGTCCCTCTACACCCCTCCCCCTCCGCAGCGGCGAGAAGAACAAGGGGGCCGCCCGCCATGCTGCGCCGGTGCGTGCGGGATCTGTACCCGCTGCGGCCTCTTAGGAGGATCCCTAGGCCGATCTCCAGCGAGGTCCCAAGTCCAGCATTTCTTCGACCCAGAAGCAAGTCGACAAAAGCTTCCCAACAGAGTTCAACACAGAATACTGTCCCTGGCCCTCAAGGAGAACCTTCTCAGTCAGGAAGCAATGTTCCGAAAGTTCTGCTTGGAACTCTGATGGTCGGCGCTGCTGCTATGGCTGCTTATCAAGCTGGCTACATAGACGATCAATTTAAGGATATAATATTTCCCTCTACAATGAAGGAAAAAAATATCAGAAAGATATACGATGATCTGAAGGCTCCTTCTGAACAAAAAGTTGATGAGAAGCAAGTAGTATCAGATCCAAATGTTGACATTGTTCAGAACAGTAACAACGAGGCTCATCCTCAAAAGGACCTTCCAACTGAAGGGATGGGTCCACCAGAAATTCCAACCACTGATGAGCAGACT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL AK073550             [        AGCCGCACAACACAACGCAACGCCGCGCTTCCGCCTCTCCACCCGCCGCCGCCTCCCTCGCCGGCTTGCCGCCGCCGCCGCGGTCGCGAGGCGGAGACCTTGCGGGACGATCGGAGCGACGTCCCTCTACACCCCTCCCCCTCCGCAACGGCGAGAAGAACAAGGGGGCCGCCCGCCATGCTGCGCCGGTGCGTGCGGGATCTGTACCCGCTGCGGCCTCTTAGGAGGATCCCTAGGCCGATCTCCAGCGAGGTCCCAAGTCCAGCATTTCTTCGACCCAGAAGCAAGTCGACAAAAGCTTCCCAACAGAGTTCAACACAGAATACTGTCCCTGGCCCTCAAGGAGAACCTTCTCAGTCAGGAAGCAATGTTCCGAAAGTTCTGCTTGGAACTCTGATGGTCGGCGCTGCTGCTATGGCTGCTTATCAAGCTGGCTACATAGACGATCAATTTAAGGATATAATATTTCCCTCTACAATGAAGGAAAAAAATATCAGAAAGATATACGATGATCTGAAGGCTCCTTCTGAACAAAAAGTTGATGAGAAGCAAGTAGTATCAGATCCAAATGTTGACATTGTTCAGAACAGTAACAACGAGGCTCATCCTCAAAAGGACCTTCCAACTGAAGGGATGGGTCCACCAGAAATTCCAACCACTGATGAGCAGACTGTTTCCTCTGAAGAAAAGGAAAAAGAAACCCTTGCCCAGGGGACACCGCAAATTCCAGATGAACATGGAGCTGCTGCTAAACCACTGTCCCAAGATATTCCTGTTATTGACATAAATCCAAGTGTTGATGATAAGGCAACAGGAGAAGTTCTTCCTGAACAAACTGACAAGACAACCACTTCAGTTTCTCCGGTACAATCGAGCCTAGCAACAGCAGGTCCTTCCCATCATGTACACACAGATACAGATGGACCAAAGGATCCATCAAGCGCTGGTGCAGTTGAACATAAATCTCTGGCTGAGACATATTTACTACAAGAACCTGATAATTCTAAAGACATGGGTGCTAAGGAAAGTAAACACGATGGTGTTATTAGTACGGGAACTTCTGATGATGGGAAAATTGTACTTGATATCATAGAGGCTATTCATGCTGCTGAAAGAAAGCAGGCAGATGCAGATGCTTACATGTATTCAGAAGAGAAAAGGAAGTTGAAGGAGAAATATGAAAAGGAGCTGAAGGACACCAGGGCTCGGGAGCTCATGTATGCTGAAGAGGCAGCAATTCTGGACAAGGAGCTGAAGAAAGAGAAATTGAAGTCAGCTGCTGTGATTAAGGAACTGCAAGAAAATGCTGAACAAAAGCTAAGGGATGAGCTGCAGCAGAAGGATGAGGAAACAAGTCAACAAGTTGAGAAGGTTCGCGAGTTAGCAAAGGCTGAGCTTGCTGCAGCTCTTGCAAAAGAGAGAGCATCCCAGATCGAACAGATTGCTGAAGCAAATCTCAATATAGATGCTTTGTGCATGGCGTTTTATGCACGATCTGAAGAAACTCGGCAGAGTCATCCGGTTCATAAGCTTGCTCTGGGTACTCTTGCTTTGGAAGATGCTCTATCCACTGGATCACCAATCCGGACAGAGGTGGATCAATTGCGCAAATCTCTTGAAGGTATTGATAAGGACTCACTGTTAGAATTGGCTCTTTCATCAATTCCAGAAGATGTTCTCGAGTACGGATCAGATACCCCTATGGATTTGAAACAAAAGTTTAATTCCTTGAAGGAAACAGTCAGGCATTTCAGCCTTATACCAGCGGGTGGTGGTGGTATGCTGACTCATGCTGTTGCTCATGTGGCTTCATCCATTAAGATCAAAGAGGACCAATCTGGAGACGGAATTGAGTCTCTTCTAAACAGAGTGGAGAACTTGATTATACATGGAGACTTGAGTGCAGCAGCGGAGGCCTTGGAAAGAGGGTTACAAGGGAGTGAAGCAGCAGAAATAGCTAGCGAGTGGGTGAAGCAGGCAAGGAAACGTGCAATAGCAGAGCAGACGCTTACTCTCCTCCATTCTTATGCTTCTTCCATCACATTCTCGTGATTTTGTTCATCAATGTAGTATTCAACAAGATCTGCGAGTTACAGACTTACGTTACTCAGTCCAATCACAAATATCTTAAGACCATATTGCAAATACCTGAATATATAGGAGCCAGAGCCATTCCTGTCAGGCGGCTGCTGAACTTTCCTCCTTTTAACAGAGCTAATAATTTTTGGCATGTAGCTACAAGCTACTTGGCATTCTTGATGTTTTAGTCGCCAGTTGAGGCACAATTTGGATAGAATTGCCGATTTTGCTGCGGATGTAAATTTTCTTCTGTACAATGATGATGATTTTCGGGGGTCGAGTTTATGAAATCAGAAATCCT          ]
[+] EMBL C26718               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ntngnGGTCCACCAGAAATTCCAACCACTGATGAGCAGACTGTTTCCTCTGAAGAAAAGGAAAAAGAAACCCTTGCCCAGGGGACACCGCAAATTCCAGATGAACATGGAGCTGCTGCTAAACCACTGTCCCAAGATATTCCTGTTATTGACATAAATCCAAGTNTTGATGATAAGGCAACAGGAGAAGTTCTTCCTGAACAAACTGACAAGACAACCACTTCAGTTTCTCCGGTACAATCGAGCCTAGCAACAGCAGGTCCTTCCCATCATGTACACACAGATACAGATGGACCAAAGGATCCATCAAGCGCTGGTGCAGTTGAACATAAATCTCTGGCTGAGACATATTTACTACAAGACCTTGNTAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL BP184680             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ATGGTGTTATTAGTACGGGAACTTCTGATGATGGGAAAATTGTACTTGATATCATAGAGGCTATTCATGCTGCTGAAAGAAAGCAGGCAGATGCAGATGCTTACATGTATTCAGAAGAGAAAAGGAAGTTGAAGGAGAAATATGAAAAGGAGCTGAAGGACACCAGGGCTCGGGAGCTCATGTATGCTGAAGAGGCAGCAATTCTGGACAAGGAGCTGAAGAAAGAGAAATTGAAGTCAGCTGCTGTGATTAAGGAACTGCAAGAAAATGCTGAACAAAAGCTAAGGGATGAGCTGCAGCAGAAGGATGAGGAAACAAGTCAACAAGTTGAGAAGGTTCGCGAGTTAGCAAAGGCTGAGCTTGCTGCAGCTCTTGCAAAAGAGAGAGCATCCCAGATCGAACAGATTGCTGAAGCAAATCTCAATATAGATGCTTTGTGCATGGCGTTTTATGCACGATCTGAAGAAACTCGGCAGAGTCATTCGGTTCATAAGCTTGCTCTGGGTACTCTTGCTTTGGAAGATGCTCTATCCACTGGATCACCAATCCGGACAGAGGTGGATCAATTGCGCAAATCTCTTGAAGGTATTGATAAGGACTCACTGTTAGAATTGGCTCTTTCATCAATTCCAGAAGATGTTCTCGAGTACGGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CF324916             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             AACAAGTCAACAAGTTGAGAAGGTTCGCGAGTTAGCAAAGGCTGAGCTTGCTGCAGCTCTTGCAAAAGAGAGAGCATCCCAGATCGAACAGATTGCTGAAGCAAATCTCAATATAGATGCTTTGTGCATGGCGTTTTATGCACGATCTGAAGAAACTCGGCAGAGTCATTCGGTTCATAAGCTTGCTCTGGGTACTCTTGCTTTGGAAGATGCTCTATCCACTGGATCACCAATCCGGACAGAGGTGGATCAATTGCGCAAATCTCTTGAAGGTATTGATAAGGACTCACTGTTAGAATTGGCTCTTTCATCAATTCCAGAAGATGTTCTCGAGTACGGATCAGATACCCCTATGGATTTGAAACAAAAGTTTAATTCCTTGAAGGAAACAGTCAGGCATTTCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL AU082869             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          GACGGAATTGAGTCTCTTCTAAACAGAGTGGAGAACTTGATTATACNTGGAGACTTGAGTGCAGCAGCGGAGGCCTTGGAAAGAGGGTTACAAGGGAGTGAAGCAGCAGAAATAGCTAGCGAGTGGGTGAAGCAGGCAAGGAAACGTGCAATNGCAGAGCAGACGCTTACTCTCCTCCATTCTTATGCTTCTTCCATCACATTCTCGTGATTTTGTTCATCNATGTAGTATTCAACAAGATCTGCGAGTTACAGACTTACGTTACTCAGTCCAATCACAAATNTCTTAAGNCCATATTGCAAATACCTGAATATATAGGAGCCAGAGCCATTCCTGTCAGGCGGCTGCTGAACTTTCCTCCTTTTAACAGAGCTAATAATTTTTGGCATGTAGCTACAAGCTACTTGGCATTCTTGATGTTTTAGTCGCCAGTTGAGGCACAATTTGGATAGAATTGCCGATTTTGCTGCGGATGTAAATTTTCTTCTGTACAATGATGATGATTTTCGGGGGTCGAGTTTATGAAATCAGAAATCCTGATGCAAAAA]




>consensus_9162#0
ATTCGCGAAGCCGCACAACACAACGCAACGCCGCGCTTCCGCCTCTCCACCCGCCGCCGC
CTCCCTCGCCGGCTTGCCGCCGCCGCCGCGGTCGCGAGGCGGAGACCTTGCGGGACGATC
GGAGCGACGTCCCTCTACACCCCTCCCCCTCCGCAGCGGCGAGAAGAACAAGGGGGCCGC
CCGCCATGCTGCGCCGGTGCGTGCGGGATCTGTACCCGCTGCGGCCTCTTAGGAGGATCC
CTAGGCCGATCTCCAGCGAGGTCCCAAGTCCAGCATTTCTTCGACCCAGAAGCAAGTCGA
CAAAAGCTTCCCAACAGAGTTCAACACAGAATACTGTCCCTGGCCCTCAAGGAGAACCTT
CTCAGTCAGGAAGCAATGTTCCGAAAGTTCTGCTTGGAACTCTGATGGTCGGCGCTGCTG
CTATGGCTGCTTATCAAGCTGGCTACATAGACGATCAATTTAAGGATATAATATTTCCCT
CTACAATGAAGGAAAAAAATATCAGAAAGATATACGATGATCTGAAGGCTCCTTCTGAAC
AAAAAGTTGATGAGAAGCAAGTAGTATCAGATCCAAATGTTGACATTGTTCAGAACAGTA
ACAACGAGGCTCATCCTCAAAAGGACCTTCCAACTGAAGGGATGGGTCCACCAGAAATTC
CAACCACTGATGAGCAGACTGTTTCCTCTGAAGAAAAGGAAAAAGAAACCCTTGCCCAGG
GGACACCGCAAATTCCAGATGAACATGGAGCTGCTGCTAAACCACTGTCCCAAGATATTC
CTGTTATTGACATAAATCCAAGTGTTGATGATAAGGCAACAGGAGAAGTTCTTCCTGAAC
AAACTGACAAGACAACCACTTCAGTTTCTCCGGTACAATCGAGCCTAGCAACAGCAGGTC
CTTCCCATCATGTACACACAGATACAGATGGACCAAAGGATCCATCAAGCGCTGGTGCAG
TTGAACATAAATCTCTGGCTGAGACATATTTACTACAAGAACCTGATAATTCTAAAGACA
TGGGTGCTAAGGAAAGTAAACACGATGGTGTTATTAGTACGGGAACTTCTGATGATGGGA
AAATTGTACTTGATATCATAGAGGCTATTCATGCTGCTGAAAGAAAGCAGGCAGATGCAG
ATGCTTACATGTATTCAGAAGAGAAAAGGAAGTTGAAGGAGAAATATGAAAAGGAGCTGA
AGGACACCAGGGCTCGGGAGCTCATGTATGCTGAAGAGGCAGCAATTCTGGACAAGGAGC
TGAAGAAAGAGAAATTGAAGTCAGCTGCTGTGATTAAGGAACTGCAAGAAAATGCTGAAC
AAAAGCTAAGGGATGAGCTGCAGCAGAAGGATGAGGAAACAAGTCAACAAGTTGAGAAGG
TTCGCGAGTTAGCAAAGGCTGAGCTTGCTGCAGCTCTTGCAAAAGAGAGAGCATCCCAGA
TCGAACAGATTGCTGAAGCAAATCTCAATATAGATGCTTTGTGCATGGCGTTTTATGCAC
GATCTGAAGAAACTCGGCAGAGTCATTCGGTTCATAAGCTTGCTCTGGGTACTCTTGCTT
TGGAAGATGCTCTATCCACTGGATCACCAATCCGGACAGAGGTGGATCAATTGCGCAAAT
CTCTTGAAGGTATTGATAAGGACTCACTGTTAGAATTGGCTCTTTCATCAATTCCAGAAG
ATGTTCTCGAGTACGGATCAGATACCCCTATGGATTTGAAACAAAAGTTTAATTCCTTGA
AGGAAACAGTCAGGCATTTCAGCCTTATACCAGCGGGTGGTGGTGGTATGCTGACTCATG
CTGTTGCTCATGTGGCTTCATCCATTAAGATCAAAGAGGACCAATCTGGAGACGGAATTG
AGTCTCTTCTAAACAGAGTGGAGAACTTGATTATACATGGAGACTTGAGTGCAGCAGCGG
AGGCCTTGGAAAGAGGGTTACAAGGGAGTGAAGCAGCAGAAATAGCTAGCGAGTGGGTGA
AGCAGGCAAGGAAACGTGCAATAGCAGAGCAGACGCTTACTCTCCTCCATTCTTATGCTT
CTTCCATCACATTCTCGTGATTTTGTTCATCAATGTAGTATTCAACAAGATCTGCGAGTT
ACAGACTTACGTTACTCAGTCCAATCACAAATATCTTAAGACCATATTGCAAATACCTGA
ATATATAGGAGCCAGAGCCATTCCTGTCAGGCGGCTGCTGAACTTTCCTCCTTTTAACAG
AGCTAATAATTTTTGGCATGTAGCTACAAGCTACTTGGCATTCTTGATGTTTTAGTCGCC
AGTTGAGGCACAATTTGGATAGAATTGCCGATTTTGCTGCGGATGTAAATTTTCTTCTGT
ACAATGATGATGATTTTCGGGGGTCGAGTTTATGAAATCAGAAATCCTGATGCAAAAA
clustalw multiple alignements is not computed in this case