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Oryza sativa
cluster # 9194 cluster # 9194       Sequences # 6       consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9194#0 length = 2247 sequences # 2  
 consensus_9194#1 length = 990 sequences # 3  
consensus_9194#2 length = 422 sequences # 1  
consensusID : consensus_9194#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 2247
fasta sequence 
                              [CACACCCACTGTTCTTGGCCATAGCTGCCTACTCCCATGGTCTCCTCGTCCTTGCCCTTGTGCTCGATCGATCACCAGCCGAGCTGATTTTTCTCTTCTGCTTGATCTCTACCTCTGACATGCATCTGAAGACCGGAGAGCATCTGCATCTGCCTATATCATCCGGTCATGGATATGGATAGATGACCGGCCTGTTCATGTCTGAAGAAAAATCAAAGGTTTGGTTTTGATCGGCTTGAGAGCGTGCCTGGCTCCCTGTATGCCACTCATGTAGCCCAATCCATGGTGTGTTTGGATGCTGTGGGTGGCGTGCAAGGAGCCAAGCATGCGTGCCATGATCTCTCTTTCTGCCTTAATTCAGTTTCAGACATGTGTAGTTGGATTTGTTTCCTCTAGGTGTTCATGTTAATTACATATTTCATGTTGATTTTGCCCGTTTGGATATGTGTTTGTCTGCTTGGTTTCGAATTGTTTTAGCAGGGGGGCAGAACTAATCAAGGATACTGCAAATCGTTGGAATTAATTTCTTGTTCAATCTTGATCCAGATAACTATGAGAGCTTTTAATCACAACGAGAAAAGGTAATCTCTCTCTATCAGCTGCCCCTTTTTCTTCTACTAGTTTATATTTAGATCGCATTCATACTCTTGACTAGCTCGCTGCAGTTTATTTGCATATGTTTTCCCAGCAAGATCTAATTAGATACTTAGATGAGATTTGGACTGTATGGTAATTTTGTTACTTCTCCTTGCGCATTTGTATTTCTGTTTATTTGTATTTATTCTCTGCTAGTACTGGAGTACTTGTTATGTTGCGTGTAATTAATTAAGCAATGTTAATTAAGTAAATTGTTAATGTACATACATACATGAGGTCATTTCTTGGTTTTCGTCTTGTACTTTAGTTCTTGAATTGTTCACTGGGCTGGCACTTAGAAAAAGCATAACGATTTAGTTTAATTGAGAAATGCCTATGGGTCTTCCCGGCTAGCTCCATAAGGTTGTCGGCTAGATGACCTGGATTCGAAGCTTCACAACTTCTAATTATTTGATATTAGGTCATTCCCTAATATTCACGTCTTTTTATTTAGTTTAATTCTTTTTTCAAAGAAAAAACTGACACGTATTTAAATTTCTGCTAGAAATGGCCATCTGTGGGATAGGGATAGAAAGCTTCAGTTACTAGTACACACTAGCTAGTTGTTTGTTTGATTTGGCCAAGAAATCTGAAGAGATATGGATTGTGTTCTTTGAAATTCATTACCTTTCTTCACTGTACTTATCGTGTGCGGTCATCCATGCTTGGACGAATTTCTTCTCTCTTTCTTAAGATCAAAGATTAAGCACCCATCATATTGTGCCTTAAGTACGTAATCCAATAAAGTTCAACATTAGGTTTGGCTCCTTAATTTGTACACTTAATTATTACATATGCGCTTCCAATTTTTAGATGAATAATGATTCTTTTGCAGCAAGATAAACTTAAACACACACAGGTGAAACTTTTAGATGGAAGGTACACTTGCTCTGACGGTAGCAAAAGTTGATCATGCCCTACTTTAGCTGTAACATGAGACATGTCAGCATATGCTTACATGCATGAATCAGCAGGGCTACAGTTTTATTATTTGCTTTGACAGCTTTCTCTCAACAATCATTCTCATTATATTTTTTATCCTAGGCTCCTTAGGAACATAGTAATTTTACAGGATTTTTGCTGAAATCGATCAGTTCAGTTCCCGCAAAATTCCACTGAAAATTAATCCTCTACTCCAAAGGCCTCTCTCTCTCTCTCTCTCTCTCTCACGTAGGATTTGCCACTGAGGTCTCAGCATCAATGGTGGCAAATTCTAGGTTTTGATTAATTTTTTAGATAATGAGGTTTTGAAATTAGAAAACTATGCAGTGCATTGTATCAGAATGACAGATATAACATCAATTCATGTAGATAACTAAAGAACCTCTTATATATCTATCTCTGGGGTAGTACTAGTGATTTAAGTAGTACTGTAATCGGGCTTTGCTGATGCGAACTTCCTCTGAAACTTTTGCTAGCTAAAACCAAAATGCGGGACTGATGATCAGCATGGAGAGCAGCCTCAATTTATTTGTAGACGCTCAAGATTACTTGCAGATCTGTCAGAAGTAATACTGCCACAATGAGGATGTTTTATGGTTATATAGGCTAAAATATATATGAGTAATATTCCATGCATGTCTATCAGCATTGTAACTAGCTATACAGGAT]

[+] EMBL AK071620             [CACACCCACTGTTCTTGGCCATAGCTGCCTACTCCCATGGTCTCCTCGTCCTTGCCCTTGTGCTCGATCGATCACCAGCCGAGCTGATTTTTCTCTTCTGCTTGATCTCTACCTCTGACATGCATCTGAAGACCGGAGAGCATCTGCATCTGCCTATATCATCCGGTCATGGATATGGATAGATGACCGGCCTGTTCATGTCTGAAGAAAAATCAAAGGTTTGGTTTTGATCGGCTTGAGAGCGTGCCTGGCTCCCTGTATGCCACTCATGTAGCCCAATCCATGGTGTGTTTGGATGCTGTGGGTGGCGTGCAAGGAGCCAAGCATGCGTGCCATGATCTCTCTTTCTGCCTTAATTCAGTTTCAGACATGTGTAGTTGGATTTGTTTCCTCTAGGTGTTCATGTTAATTACATATTTCATGTTGATTTTGCCCGTTTGGATATGTGTTTGTCTGCTTGGTTTCGAATTGTTTTAGCAGGGGGGCAGAACTAATCAAGGATACTGCAAATCGTTGGAATTAATTTCTTGTTCAATCTTGATCCAGATAACTATGAGAGCTTTTAATCACAACGAGAAAAGGTAATCTCTCTCTATCAGCTGCCCCTTTTTCTTCTACTAGTTTATATTTAGATCGCATTCATACTCTTGACTAGCTCGCTGCAGTTTATTTGCATATGTTTTCCCAGCAAGATCTAATTAGATACTTAGATGAGATTTGGACTGTATGGTAATTTTGTTACTTCTCCTTGCGCATTTGTATTTCTGTTTATTTGTATTTATTCTCTGCTAGTACTGGAGTACTTGTTATGTTGCGTGTAATTAATTAAGCAATGTTAATTAAGTAAATTGTTAATGTACATACATACATGAGGTCATTTCTTGGTTTTCGTCTTGTACTTTAGTTCTTGAATTGTTCACTGGGCTGGCACTTAGAAAAAGCATAACGATTTAGTTTAATTGAGAAATGCCTATGGGTCTTCCCGGCTAGCTCCATAAGGTTGTCGGCTAGATGACCTGGATTCGAAGCTTCACAACTTCTAATTATTTGATATTAGGTCATTCCCTAATATTCACGTCTTTTTATTTAGTTTAATTCTTTTTTCAAAGAAAAAACTGACACGTATTTAAATTTCTGCTAGAAATGGCCATCTGTGGGATAGGGATAGAAAGCTTCAGTTACTAGTACACACTAGCTAGTTGTTTGTTTGATTTGGCCAAGAAATCTGAAGAGATATGGATTGTGTTCTTTGAAATTCATTACCTTTCTTCACTGTACTTATCGTGTGCGGTCATCCATGCTTGGACGAATTTCTTCTCTCTTTCTTAAGATCAAAGATTAAGCACCCATCATATTGTGCCTTAAGTACGTAATCCAATAAAGTTCAACATTAGGTTTGGCTCCTTAATTTGTACACTTAATTATTACATATGCGCTTCCAATTTTTAGATGAATAATGATTCTTTTGCAGCAAGATAAACTTAAACACACACAGGTGAAACTTTTAGATGGAAGGTACACTTGCTCTGACGGTAGCAAAAGTTGATCATGCCCTACTTTAGCTGTAACATGAGACATGTCAGCATATGCTTACATGCATGAATCAGCAGGGCTACAGTTTTATTATTTGCTTTGACAGCTTTCTCTCAACAATCATTCTCATTATATTTTTTATCCTAGGCTCCTTAGGAACATAGTAATTTTACAGGATTTTTGCTGAAATCGATCAGTTCAGTTCCCGCAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL AK064503             [ ACACCCACTGTTCTTGGCCATAGCTGCCTACTCCCATGGTCTCCTCGTCCTTGCCCTTGTGCTCGATCGATCACCAGCCGAGCTGATTTTTCTCTTCTGCTTGATCTCTACCTCTGACATGCATCTGAAGACCGGAGAGCATCTGCATCTGCCTATATCATCCGGTCATGGATATGGATAGATGACCGGCCTGTTCATGTCTGAAGAAAAATCAAAGGTTTGGTTTTGATCGGCTTGAGAGCGTGCCTGGCTCCCTGTATGCCACTCATGTAGCCCAATCCATGGTGTGTTTGGATGCTGTGGGTGGCGTGCAAGGAGCCAAGCATGCGTGCCATGATCTCTCTTTCTGCCTTAATTCAGTTTCAGACATGTGTAGTTGGATTTGTTTCCTCTAGGTGTTCATGTTAATTACATATTTCATGTTGATTTTGCCCGTTTGGATATGTGTTTGTCTGCTTGGTTTCGAATTGTTTTAGCAGGGGGGCAGAACTAATCAAGGATACTGCAAATCGTTGGAATTAATTTCTTGTTCAATCTTGATCCAGATAACTATGAGAGCTTTTAATCACAACGAGAAAAGGTAATCTCTCTCTATCAGCTGCCCCTTTTTCTTCTACTAGTTTATATTTAGATCGCATTCATACTCTTGACTAGCTCGCTGCAGTTTATTTGCATATGTTTTCCCAGCAAGATCTAATTAGATACTTAGATGAGATTTGGACTGTATGGTAATTTTGTTACTTCTCCTTGCGCATTTGTATTTCTGTTTATTTGTATTTATTCTCTGCTAGTACTGGAGTACTTGTTATGTTGCGTGTAATTAATTAAGCAATGTTAATTAAGTAAATTGTTAATGTACATACATACATGAGGTCATTTCTTGGTTTTCGTCTTGTACTTTAGTTCTTGAATTGTTCACTGGGCTGGCACTTAGAAAAAGCATAACGATTTAGTTTAATTGAGAAATGCCTATGGGTCTTCCCGGCTAGCTCCATAAGGTTGTCGGCTAGATGACCTGGATTCGAAGCTTCACAACTTCTAATTATTTGATATTAGGTCATTCCCTAATATTCACGTCTTTTTATTTAGTTTAATTCTTTTTTCAAAGAAAAAACTGACACGTATTTAAATTTCTGCTAGAAATGGCCATCTGTGGGATAGGGATAGAAAGCTTCAGTTACTAGTACACACTAGCTAGTTGTTTGTTTGATTTGGCCAAGAAATCTGAAGAGATATGGATTGTGTTCTTTGAAATTCATTACCTTTCTTCACTGTACTTATCGTGTGCGGTCATCCATGCTTGGACGAATTTCTTCTCTCTTTCTTAAGATCAAAGATTAAGCACCCATCATATTGTGCCTTAAGTACGTAATCCAATAAAGTTCAACATTAGGTTTGGCTCCTTAATTTGTACACTTAATTATTACATATGCGCTTCCAATTTTTAGATGAATAATGATTCTTTTGCAGCAAGATAAACTTAAACACACACAGGTGAAACTTTTAGATGGAAGGTACACTTGCTCTGACGGTAGCAAAAGTTGATCATGCCCTACTTTAGCTGTAACATGAGACATGTCAGCATATGCTTACATGCATGAATCAGCAGGGCTACAGTTTTATTATTTGCTTTGACAGCTTTCTCTCAACAATCATTCTCATTATATTTTTTATCCTAGGCTCCTTAGGAACATAGTAATTTTACAGGATTTTTGCTGAAATCGATCAGTTCAGTTCCCGCAAAATTCCACTGAAAATTAATCCTCTACTCCAAAGGCCTCTCTCTCTCTCTCTCTCTCTCTCACGTAGGATTTGCCACTGAGGTCTCAGCATCAATGGTGGCAAATTCTAGGTTTTGATTAATTTTTTAGATAATGAGGTTTTGAAATTAGAAAACTATGCAGTGCATTGTATCAGAATGACAGATATAACATCAATTCATGTAGATAACTAAAGAACCTCTTATATATCTATCTCTGGGGTAGTACTAGTGATTTAAGTAGTACTGTAATCGGGCTTTGCTGATGCGAACTTCCTCTGAAACTTTTGCTAGCTAAAACCAAAATGCGGGACTGATGATCAGCATGGAGAGCAGCCTCAATTTATTTGTAGACGCTCAAGATTACTTGCAGATCTGTCAGAAGTAATACTGCCACAATGAGGATGTTTTATGGTTATATAGGCTAAAATATATATGAGTAATATTCCATGCATGTCTATCAGCATTGTAACTAGCTATACAGGAT]




>consensus_9194#0
CACACCCACTGTTCTTGGCCATAGCTGCCTACTCCCATGGTCTCCTCGTCCTTGCCCTTG
TGCTCGATCGATCACCAGCCGAGCTGATTTTTCTCTTCTGCTTGATCTCTACCTCTGACA
TGCATCTGAAGACCGGAGAGCATCTGCATCTGCCTATATCATCCGGTCATGGATATGGAT
AGATGACCGGCCTGTTCATGTCTGAAGAAAAATCAAAGGTTTGGTTTTGATCGGCTTGAG
AGCGTGCCTGGCTCCCTGTATGCCACTCATGTAGCCCAATCCATGGTGTGTTTGGATGCT
GTGGGTGGCGTGCAAGGAGCCAAGCATGCGTGCCATGATCTCTCTTTCTGCCTTAATTCA
GTTTCAGACATGTGTAGTTGGATTTGTTTCCTCTAGGTGTTCATGTTAATTACATATTTC
ATGTTGATTTTGCCCGTTTGGATATGTGTTTGTCTGCTTGGTTTCGAATTGTTTTAGCAG
GGGGGCAGAACTAATCAAGGATACTGCAAATCGTTGGAATTAATTTCTTGTTCAATCTTG
ATCCAGATAACTATGAGAGCTTTTAATCACAACGAGAAAAGGTAATCTCTCTCTATCAGC
TGCCCCTTTTTCTTCTACTAGTTTATATTTAGATCGCATTCATACTCTTGACTAGCTCGC
TGCAGTTTATTTGCATATGTTTTCCCAGCAAGATCTAATTAGATACTTAGATGAGATTTG
GACTGTATGGTAATTTTGTTACTTCTCCTTGCGCATTTGTATTTCTGTTTATTTGTATTT
ATTCTCTGCTAGTACTGGAGTACTTGTTATGTTGCGTGTAATTAATTAAGCAATGTTAAT
TAAGTAAATTGTTAATGTACATACATACATGAGGTCATTTCTTGGTTTTCGTCTTGTACT
TTAGTTCTTGAATTGTTCACTGGGCTGGCACTTAGAAAAAGCATAACGATTTAGTTTAAT
TGAGAAATGCCTATGGGTCTTCCCGGCTAGCTCCATAAGGTTGTCGGCTAGATGACCTGG
ATTCGAAGCTTCACAACTTCTAATTATTTGATATTAGGTCATTCCCTAATATTCACGTCT
TTTTATTTAGTTTAATTCTTTTTTCAAAGAAAAAACTGACACGTATTTAAATTTCTGCTA
GAAATGGCCATCTGTGGGATAGGGATAGAAAGCTTCAGTTACTAGTACACACTAGCTAGT
TGTTTGTTTGATTTGGCCAAGAAATCTGAAGAGATATGGATTGTGTTCTTTGAAATTCAT
TACCTTTCTTCACTGTACTTATCGTGTGCGGTCATCCATGCTTGGACGAATTTCTTCTCT
CTTTCTTAAGATCAAAGATTAAGCACCCATCATATTGTGCCTTAAGTACGTAATCCAATA
AAGTTCAACATTAGGTTTGGCTCCTTAATTTGTACACTTAATTATTACATATGCGCTTCC
AATTTTTAGATGAATAATGATTCTTTTGCAGCAAGATAAACTTAAACACACACAGGTGAA
ACTTTTAGATGGAAGGTACACTTGCTCTGACGGTAGCAAAAGTTGATCATGCCCTACTTT
AGCTGTAACATGAGACATGTCAGCATATGCTTACATGCATGAATCAGCAGGGCTACAGTT
TTATTATTTGCTTTGACAGCTTTCTCTCAACAATCATTCTCATTATATTTTTTATCCTAG
GCTCCTTAGGAACATAGTAATTTTACAGGATTTTTGCTGAAATCGATCAGTTCAGTTCCC
GCAAAATTCCACTGAAAATTAATCCTCTACTCCAAAGGCCTCTCTCTCTCTCTCTCTCTC
TCTCACGTAGGATTTGCCACTGAGGTCTCAGCATCAATGGTGGCAAATTCTAGGTTTTGA
TTAATTTTTTAGATAATGAGGTTTTGAAATTAGAAAACTATGCAGTGCATTGTATCAGAA
TGACAGATATAACATCAATTCATGTAGATAACTAAAGAACCTCTTATATATCTATCTCTG
GGGTAGTACTAGTGATTTAAGTAGTACTGTAATCGGGCTTTGCTGATGCGAACTTCCTCT
GAAACTTTTGCTAGCTAAAACCAAAATGCGGGACTGATGATCAGCATGGAGAGCAGCCTC
AATTTATTTGTAGACGCTCAAGATTACTTGCAGATCTGTCAGAAGTAATACTGCCACAAT
GAGGATGTTTTATGGTTATATAGGCTAAAATATATATGAGTAATATTCCATGCATGTCTA
TCAGCATTGTAACTAGCTATACAGGAT

consensusID : consensus_9194#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 990
fasta sequence 
                              [CCCACCCACTGTTCTTGGCCATAGCTGCCTACTCCCATGGTCTCCTCGTCCTTGCCCTTGTGCTCGATCGATCACCAGCCGAGCTGATTTTTCTCTTCTGCTTGATCTCTACCTCTGACATGCATCTGAAGACCTGAGAGCATCTGCATCTGCCTATATCATCCGGTCATGGATATGGATAGATGACCGGCCTGTTCATGTCTGAAGAAAAATCAAAGGTTTGGTTTTGATCGGCTTGAGAGCGTGCCTGGCTCCCTGTATGCCACTCATGTAGCCCAATCCATGGTGTGTTTGGATGCTGTGGGTGGCGTGCAAGGAGCCAAGCATGCGTGCCATGATCTCTCTTTCTGCCTTAATTCAGTTTCAGACATGTGTAGTTGGATTTGTTTCCTCTAGGTGTTCATGTTAATTACATATTTCATGTTGATTTTGCCCGTTTGGATATGTGTTTGTCTGCTTGGTTTCGAATTGTTTTAGCAGGGGGGCAGAACTAATCAAGGA---TGCAAATCGTTGGAATTAATTTCTTGTTCAATCTTGATCCAGATAACTATGAGAGCTTTTAATCACAACGAGAAAAGCTAAAACCAAAATGCGGGACTGATGATCAGCATGGAGAGCAGCCTCAATTTATTTGTAGACGCTCAAGATTACTTGCAGATCTGTCAGAAGTAATACTGCCACAATGAGGATGTTTTATGGTTATATAGGCTAAAATATATATGAGTAATATTCCATGCATGTCTATCAGCATTGTAACTAGCTATACAGGATAAAAATTCACAAAAATTCATACAGAATCTCTCTTCGATATATTCCCTACTAGCAGATAGCTGAACCCTGAATAGAGCTTTGCAAGGTTGCAGTTAGCAGGTACAAGGCTTTGAGAGGAGTACAAACGAGTACTTTCCAATATATGCATTTGTCTGATAGATATGTACACAGTGACACAGTTTGTGATGCTGCTGGTAAAAGTCGTTCACTTTTGAAAAA]

[+] EMBL CF327976             [CCCACCCACTGTTCTTGGCCATAGCTGCCTACTCCCATGGTCTCCTCGTCCTTGCCCTTGTGCTCGATCGATCACCAGCCGAGCTGATTTTTCTCTTCTGCTTGATCTCTACCTCTGACATGCATCTGAAGACCTGAGAGCATCTGCATCTGCCTATATCATCCGGTCATGGATATGGATAGATGACCGGCCTGTTCATGTCTGAAGAAAAATCAAAGGTTTGGTTTTGATCGGCTTGAGAGCGTGCCTGGCTCCCTGTATGCCACTCATGTAGCCCAATCCATGGTGTGTTTGGATGCTGTGGGTGGCGTGCAAGGAGCCAAGCATGCGTGCCATGATCTCTCTTTCTGCCTTAATTCAGTTTCAGACATGTGTAGTTGGATTTGTTTCCTCTAGGTGTTCATGTTAATTACATATTTCATGTTGATTTTGCCCGTTTGGATATGTGTTTGTCTGCTTGGTTTCGAATTGTTTTAGCAGGGGGGCAGAACTAATCAAGGA   TGCAAATCGTTGGAATTAATTTCTTGTTCAATCTTGATCCAGATAACTATGAGAGCTTTTAATCACAACGAGAAAAGCTAAAACCAAAATGCGGGACTGATGATCAG                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CF330305             [     CCACTGTTCTTGGCC TAGCTGCCTACTCCCATGGTCTCCTCGTCCTTGCCCTTGTGCTCGATCGATCACCAGCCGAGCTGATTTTTCTCTTCTGCTTGATCTCTACCTCTGACATGCATCTGAAGACCGGAGAGCATCTGCATCTGCCTATATCATCCGGTCATGGATATGGATAGATGACCGGCCTGTTCATGTCTGAAGAAAAATCAAAGGTTTGGTTTTGATCGGCTTGAGAGCGTGCCTGGCTCCCTGTATGCCACTCATGTAGCCCAATCCATGGTGTGTTTGGATGCTGTGGGTGGCGTGCAAGGAGCCAAGCATGCGTGCCATGATCTCTCTTTCTGCCTTAATTCAGTTTCAGACATGTGTAGTTGGATTTGTTTCCTCTAGGTGTTCATGTTAATTACATATTTCATGTTGATTTTGCCCGTTTGGATATGTGTTTGTCTGCTTGGTTTCGAATTGTTTTAGCAGGGGGGCAGAACTAATCAAGGATACTGCAAATCGTTGGAATTAATTTCTTGTTCAATCTTGATCCAGATAACTATGAGAGCTTTTAATCACAACGAGAAAAGCTAAAACCAAAATGCGGGACTGATGATCAGCATGGAGAGCAGCCTCAATTTATTTG                                                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL CF327975             [                                                                                                                                                                                                                                                                                                                                                                         TTTCAGACATGTGTAGTTGGATTTGTTTCCTCTAGGTGTTCATGTTAATTACATATTTCATGTTGATTTTGCCCGTTTGGATATGTGTTTGTCTGCTTGGTTTCGAATTGTTTTAGCAGGGGGGCAGAACTAATCAAGGA   TGCAAATCGTTGGAATTAATTTCTTGTTCAATCTTGATCCAGATAACTATGAGAGCTTTTAATCACAACGAGAAAAGCTAAAACCAAAATGCGGGACTGATGATCAGCATGGAGAGCAGCCTCAATTTATTTGTAGACGCTCAAGATTACTTGCAGATCTGTCAGAAGTAATACTGCCACAATGAGGATGTTTTATGGTTATATAGGCTAAAATATATATGAGTAATATTCCATGCATGTCTATCAGCATTGTAACTAGCTATACAGGATAAAAATTCACAAAAATTCATACAGAATCTCTCTTCGATATATTCCCTACTAGCAGATAGCTGAACCCTGAATAGAGCTTTGCAAGGTTGCAGTTAGCAGGTACAAGGCTTTGAGAGGAGTACAAACGAGTACTTTCCAATATATGCATTTGTCTGATAGATATGTACACAGTGACACAGTTTGTGATGCTGCTGGTAAAAGTCGTTCACTTTTGAAAAA]




>consensus_9194#1
CCCACCCACTGTTCTTGGCCATAGCTGCCTACTCCCATGGTCTCCTCGTCCTTGCCCTTG
TGCTCGATCGATCACCAGCCGAGCTGATTTTTCTCTTCTGCTTGATCTCTACCTCTGACA
TGCATCTGAAGACCTGAGAGCATCTGCATCTGCCTATATCATCCGGTCATGGATATGGAT
AGATGACCGGCCTGTTCATGTCTGAAGAAAAATCAAAGGTTTGGTTTTGATCGGCTTGAG
AGCGTGCCTGGCTCCCTGTATGCCACTCATGTAGCCCAATCCATGGTGTGTTTGGATGCT
GTGGGTGGCGTGCAAGGAGCCAAGCATGCGTGCCATGATCTCTCTTTCTGCCTTAATTCA
GTTTCAGACATGTGTAGTTGGATTTGTTTCCTCTAGGTGTTCATGTTAATTACATATTTC
ATGTTGATTTTGCCCGTTTGGATATGTGTTTGTCTGCTTGGTTTCGAATTGTTTTAGCAG
GGGGGCAGAACTAATCAAGGATGCAAATCGTTGGAATTAATTTCTTGTTCAATCTTGATC
CAGATAACTATGAGAGCTTTTAATCACAACGAGAAAAGCTAAAACCAAAATGCGGGACTG
ATGATCAGCATGGAGAGCAGCCTCAATTTATTTGTAGACGCTCAAGATTACTTGCAGATC
TGTCAGAAGTAATACTGCCACAATGAGGATGTTTTATGGTTATATAGGCTAAAATATATA
TGAGTAATATTCCATGCATGTCTATCAGCATTGTAACTAGCTATACAGGATAAAAATTCA
CAAAAATTCATACAGAATCTCTCTTCGATATATTCCCTACTAGCAGATAGCTGAACCCTG
AATAGAGCTTTGCAAGGTTGCAGTTAGCAGGTACAAGGCTTTGAGAGGAGTACAAACGAG
TACTTTCCAATATATGCATTTGTCTGATAGATATGTACACAGTGACACAGTTTGTGATGC
TGCTGGTAAAAGTCGTTCACTTTTGAAAAA

consensusID : consensus_9194#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 422
fasta sequence 
                              [CCTTAATTCAGTTTCAGACATGTGTAGTTGGATTTGTTTCCTCTAGGTGTTCATGTTAATTACATATTTCATGTTGATTTTGCCCGTTTGGATATGTGTTTGTCTGCTTGGTTTCGAATTGTTTTAGCAGGGGGGCAGAACTAATCAAGGATACTGCAAATCGTTGGAATTAATTTCTTGTTCAATCTTGATCCAGATAACTATGAGAGCTTTTAATCACAACGAGAAAAGGGAACAAAAAATGTGGGATTCGATNCTAAGGAGAAACTTAGCATCACAGAGAGGAAAAATGGTGAGAAAACCCACGCACGAGAGGGGACTCGAACTCAGACACACCTTAAGGTTTTACCTNCTTATACCCGACATATATCTTTTCATAAAAGAAAGTGAGAGTACCCAACTAACCTTAATATGTTGGAATA]

[+] EMBL C73637               [CCTTAATTCAGTTTCAGACATGTGTAGTTGGATTTGTTTCCTCTAGGTGTTCATGTTAATTACATATTTCATGTTGATTTTGCCCGTTTGGATATGTGTTTGTCTGCTTGGTTTCGAATTGTTTTAGCAGGGGGGCAGAACTAATCAAGGATACTGCAAATCGTTGGAATTAATTTCTTGTTCAATCTTGATCCAGATAACTATGAGAGCTTTTAATCACAACGAGAAAAGGGAACAAAAAATGTGGGATTCGATNCTAAGGAGAAACTTAGCATCACAGAGAGGAAAAATGGTGAGAAAACCCACGCACGAGAGGGGACTCGAACTCAGACACACCTTAAGGTTTTACCTNCTTATACCCGACATATATCTTTTCATAAAAGAAAGTGAGAGTACCCAACTAACCTTAATATGTTGGAATA]




>consensus_9194#2
CCTTAATTCAGTTTCAGACATGTGTAGTTGGATTTGTTTCCTCTAGGTGTTCATGTTAAT
TACATATTTCATGTTGATTTTGCCCGTTTGGATATGTGTTTGTCTGCTTGGTTTCGAATT
GTTTTAGCAGGGGGGCAGAACTAATCAAGGATACTGCAAATCGTTGGAATTAATTTCTTG
TTCAATCTTGATCCAGATAACTATGAGAGCTTTTAATCACAACGAGAAAAGGGAACAAAA
AATGTGGGATTCGATNCTAAGGAGAAACTTAGCATCACAGAGAGGAAAAATGGTGAGAAA
ACCCACGCACGAGAGGGGACTCGAACTCAGACACACCTTAAGGTTTTACCTNCTTATACC
CGACATATATCTTTTCATAAAAGAAAGTGAGAGTACCCAACTAACCTTAATATGTTGGAA
TA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9194#1      CCCACCCACTGTTCTTGGCCATAGCTGCCTACTCCCATGGTCTCCTCGTCCTTGCCCTTG 60
consensus_9194#2      ------------------------------------------------------------
consensus_9194#0      CACACCCACTGTTCTTGGCCATAGCTGCCTACTCCCATGGTCTCCTCGTCCTTGCCCTTG 60
                                                                                  

consensus_9194#1      TGCTCGATCGATCACCAGCCGAGCTGATTTTTCTCTTCTGCTTGATCTCTACCTCTGACA 120
consensus_9194#2      ------------------------------------------------------------
consensus_9194#0      TGCTCGATCGATCACCAGCCGAGCTGATTTTTCTCTTCTGCTTGATCTCTACCTCTGACA 120
                                                                                  

consensus_9194#1      TGCATCTGAAGACCTGAGAGCATCTGCATCTGCCTATATCATCCGGTCATGGATATGGAT 180
consensus_9194#2      ------------------------------------------------------------
consensus_9194#0      TGCATCTGAAGACCGGAGAGCATCTGCATCTGCCTATATCATCCGGTCATGGATATGGAT 180
                                                                                  

consensus_9194#1      AGATGACCGGCCTGTTCATGTCTGAAGAAAAATCAAAGGTTTGGTTTTGATCGGCTTGAG 240
consensus_9194#2      ------------------------------------------------------------
consensus_9194#0      AGATGACCGGCCTGTTCATGTCTGAAGAAAAATCAAAGGTTTGGTTTTGATCGGCTTGAG 240
                                                                                  

consensus_9194#1      AGCGTGCCTGGCTCCCTGTATGCCACTCATGTAGCCCAATCCATGGTGTGTTTGGATGCT 300
consensus_9194#2      ------------------------------------------------------------
consensus_9194#0      AGCGTGCCTGGCTCCCTGTATGCCACTCATGTAGCCCAATCCATGGTGTGTTTGGATGCT 300
                                                                                  

consensus_9194#1      GTGGGTGGCGTGCAAGGAGCCAAGCATGCGTGCCATGATCTCTCTTTCTGCCTTAATTCA 360
consensus_9194#2      --------------------------------------------------CCTTAATTCA 10
consensus_9194#0      GTGGGTGGCGTGCAAGGAGCCAAGCATGCGTGCCATGATCTCTCTTTCTGCCTTAATTCA 360
                                                                        **********

consensus_9194#1      GTTTCAGACATGTGTAGTTGGATTTGTTTCCTCTAGGTGTTCATGTTAATTACATATTTC 420
consensus_9194#2      GTTTCAGACATGTGTAGTTGGATTTGTTTCCTCTAGGTGTTCATGTTAATTACATATTTC 70
consensus_9194#0      GTTTCAGACATGTGTAGTTGGATTTGTTTCCTCTAGGTGTTCATGTTAATTACATATTTC 420
                      ************************************************************

consensus_9194#1      ATGTTGATTTTGCCCGTTTGGATATGTGTTTGTCTGCTTGGTTTCGAATTGTTTTAGCAG 480
consensus_9194#2      ATGTTGATTTTGCCCGTTTGGATATGTGTTTGTCTGCTTGGTTTCGAATTGTTTTAGCAG 130
consensus_9194#0      ATGTTGATTTTGCCCGTTTGGATATGTGTTTGTCTGCTTGGTTTCGAATTGTTTTAGCAG 480
                      ************************************************************

consensus_9194#1      GGGGGCAGAACTAATCAAGGA---TGCAAATCGTTGGAATTAATTTCTTGTTCAATCTTG 537
consensus_9194#2      GGGGGCAGAACTAATCAAGGATACTGCAAATCGTTGGAATTAATTTCTTGTTCAATCTTG 190
consensus_9194#0      GGGGGCAGAACTAATCAAGGATACTGCAAATCGTTGGAATTAATTTCTTGTTCAATCTTG 540
                      *********************   ************************************

consensus_9194#1      ATCCAGATAACTATGAGAGCTTTTAATCACAACGAGAAAAGCTAA-------AACCAAAA 590
consensus_9194#2      ATCCAGATAACTATGAGAGCTTTTAATCACAACGAGAAAAGGGAA-------CAA-AAAA 242
consensus_9194#0      ATCCAGATAACTATGAGAGCTTTTAATCACAACGAGAAAAGGTAATCTCTCTCTATCAGC 600
                      *****************************************  **            *  

consensus_9194#1      TGCGGGACTGATGATCA-------GCATGGAGAGCAGCCTCAATTTATTTGTAGAC--GC 641
consensus_9194#2      TGTGGGATTCGATNCTA-------AGGAGAAACTTAGCATCACAGAGAGGAAAAAT--GG 293
consensus_9194#0      TGCCCCTTTTTCTTCTACTAGTTTATATTTAGATCGCATTCATACTCTTGACTAGCTCGC 660
                      **      *       *             *        ***                * 

consensus_9194#1      TCAAGATTACTTGCAGATC-------TGTCAGAAGTAAT-----ACTGCCACAATGAGGA 689
consensus_9194#2      T-GAGAAAACCCACGCACG-------AGAGGGGACTCGA-----ACTCAGACA------- 333
consensus_9194#0      TGCAGTTTATTTGCATATGTTTTCCCAGCAAGATCTAATTAGATACTTAGATGAGATTTG 720
                      *  **   *    *  *          *   *   *        ***   *         

consensus_9194#1      TGTTTTATGGTTATATAGGCTAAAATATATATGAGTAATATTCCATGCATGTCTATCAGC 749
consensus_9194#2      CACCTTAAGGTTTTACCTNCTTATACCCG-ACATATATCTTTTCATAAAAGAAAGTGAGA 392
consensus_9194#0      GACTGTATGGTAATTTTGTTACTTCTCCTTGCGCATTTGTATTTCTGTTTATTTGTATTT 780
                           ** ***  *                     *     *   *         *    

consensus_9194#1      AT-TGTAACTAGCTATACAGG----ATAAAAATTCACAAAAATTCATACAGAATCTCTCT 804
consensus_9194#2      GTACCCAACTAACCTTAATAT----GTTGGAATA-------------------------- 422
consensus_9194#0      ATTCTCTGCTAGTACTGGAGTACTTGTTATGTTGCGTGTAATTAATTAAGCAATGTTAAT 840
                       *      ***    *          *     *                           

consensus_9194#1      TCGATATATTCCCTACTAGCAGATAGCTGAACCCTGAATAGAGCTTTGCAAGGTTGCAGT 864
consensus_9194#2      ------------------------------------------------------------
consensus_9194#0      TAAGTAAATTGTTAATGTACATACATACATGAGGTCATTTCTTGGTTTTCGTCTTGTACT 900
                                                                                  

consensus_9194#1      TAGCAGGTACAAGGCTTTGAGAGGAGTACAAACGAGTACTTTCCAATATATGCATTTGTC 924
consensus_9194#2      ------------------------------------------------------------
consensus_9194#0      TTAGTTCTTGAATTGTTCACTGGGCTGGCACTTAGAAAAAGCATAACGATTTAGTTTAAT 960
                                                                                  

consensus_9194#1      TGATAGATATGTACACAGTGACACAGTTTGTGATGCTGCTGGTAAAAGTCGTTCACTTTT 984
consensus_9194#2      ------------------------------------------------------------
consensus_9194#0      TGAGAAATGCCTATGGGTCTTCCCGGCTAGCTCCATAAGGTTGTCGGCTAGATGACCTGG 1020
                                                                                  

consensus_9194#1      GAAAAA------------------------------------------------------ 990
consensus_9194#2      ------------------------------------------------------------
consensus_9194#0      ATTCGAAGCTTCACAACTTCTAATTATTTGATATTAGGTCATTCCCTAATATTCACGTCT 1080
                                                                                  

consensus_9194#1      ------------------------------------------------------------
consensus_9194#2      ------------------------------------------------------------
consensus_9194#0      TTTTATTTAGTTTAATTCTTTTTTCAAAGAAAAAACTGACACGTATTTAAATTTCTGCTA 1140
                                                                                  

consensus_9194#1      ------------------------------------------------------------
consensus_9194#2      ------------------------------------------------------------
consensus_9194#0      GAAATGGCCATCTGTGGGATAGGGATAGAAAGCTTCAGTTACTAGTACACACTAGCTAGT 1200
                                                                                  

consensus_9194#1      ------------------------------------------------------------
consensus_9194#2      ------------------------------------------------------------
consensus_9194#0      TGTTTGTTTGATTTGGCCAAGAAATCTGAAGAGATATGGATTGTGTTCTTTGAAATTCAT 1260
                                                                                  

consensus_9194#1      ------------------------------------------------------------
consensus_9194#2      ------------------------------------------------------------
consensus_9194#0      TACCTTTCTTCACTGTACTTATCGTGTGCGGTCATCCATGCTTGGACGAATTTCTTCTCT 1320
                                                                                  

consensus_9194#1      ------------------------------------------------------------
consensus_9194#2      ------------------------------------------------------------
consensus_9194#0      CTTTCTTAAGATCAAAGATTAAGCACCCATCATATTGTGCCTTAAGTACGTAATCCAATA 1380
                                                                                  

consensus_9194#1      ------------------------------------------------------------
consensus_9194#2      ------------------------------------------------------------
consensus_9194#0      AAGTTCAACATTAGGTTTGGCTCCTTAATTTGTACACTTAATTATTACATATGCGCTTCC 1440
                                                                                  

consensus_9194#1      ------------------------------------------------------------
consensus_9194#2      ------------------------------------------------------------
consensus_9194#0      AATTTTTAGATGAATAATGATTCTTTTGCAGCAAGATAAACTTAAACACACACAGGTGAA 1500
                                                                                  

consensus_9194#1      ------------------------------------------------------------
consensus_9194#2      ------------------------------------------------------------
consensus_9194#0      ACTTTTAGATGGAAGGTACACTTGCTCTGACGGTAGCAAAAGTTGATCATGCCCTACTTT 1560
                                                                                  

consensus_9194#1      ------------------------------------------------------------
consensus_9194#2      ------------------------------------------------------------
consensus_9194#0      AGCTGTAACATGAGACATGTCAGCATATGCTTACATGCATGAATCAGCAGGGCTACAGTT 1620
                                                                                  

consensus_9194#1      ------------------------------------------------------------
consensus_9194#2      ------------------------------------------------------------
consensus_9194#0      TTATTATTTGCTTTGACAGCTTTCTCTCAACAATCATTCTCATTATATTTTTTATCCTAG 1680
                                                                                  

consensus_9194#1      ------------------------------------------------------------
consensus_9194#2      ------------------------------------------------------------
consensus_9194#0      GCTCCTTAGGAACATAGTAATTTTACAGGATTTTTGCTGAAATCGATCAGTTCAGTTCCC 1740
                                                                                  

consensus_9194#1      ------------------------------------------------------------
consensus_9194#2      ------------------------------------------------------------
consensus_9194#0      GCAAAATTCCACTGAAAATTAATCCTCTACTCCAAAGGCCTCTCTCTCTCTCTCTCTCTC 1800
                                                                                  

consensus_9194#1      ------------------------------------------------------------
consensus_9194#2      ------------------------------------------------------------
consensus_9194#0      TCTCACGTAGGATTTGCCACTGAGGTCTCAGCATCAATGGTGGCAAATTCTAGGTTTTGA 1860
                                                                                  

consensus_9194#1      ------------------------------------------------------------
consensus_9194#2      ------------------------------------------------------------
consensus_9194#0      TTAATTTTTTAGATAATGAGGTTTTGAAATTAGAAAACTATGCAGTGCATTGTATCAGAA 1920
                                                                                  

consensus_9194#1      ------------------------------------------------------------
consensus_9194#2      ------------------------------------------------------------
consensus_9194#0      TGACAGATATAACATCAATTCATGTAGATAACTAAAGAACCTCTTATATATCTATCTCTG 1980
                                                                                  

consensus_9194#1      ------------------------------------------------------------
consensus_9194#2      ------------------------------------------------------------
consensus_9194#0      GGGTAGTACTAGTGATTTAAGTAGTACTGTAATCGGGCTTTGCTGATGCGAACTTCCTCT 2040
                                                                                  

consensus_9194#1      ------------------------------------------------------------
consensus_9194#2      ------------------------------------------------------------
consensus_9194#0      GAAACTTTTGCTAGCTAAAACCAAAATGCGGGACTGATGATCAGCATGGAGAGCAGCCTC 2100
                                                                                  

consensus_9194#1      ------------------------------------------------------------
consensus_9194#2      ------------------------------------------------------------
consensus_9194#0      AATTTATTTGTAGACGCTCAAGATTACTTGCAGATCTGTCAGAAGTAATACTGCCACAAT 2160
                                                                                  

consensus_9194#1      ------------------------------------------------------------
consensus_9194#2      ------------------------------------------------------------
consensus_9194#0      GAGGATGTTTTATGGTTATATAGGCTAAAATATATATGAGTAATATTCCATGCATGTCTA 2220
                                                                                  

consensus_9194#1      ---------------------------
consensus_9194#2      ---------------------------
consensus_9194#0      TCAGCATTGTAACTAGCTATACAGGAT 2247


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)