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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9217#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1266 fasta sequence
[ACTCGCTCGATCGAGAGCAATACAATGTCGCATAACTCCAACCACTACGCGACGACGAACCAGCATAGCCACGACGATGAACGCTGCCAGGGCAGCTTCGTCATGGCAGTGCCGCCGTCAGAGAATGATAGTGATGATGATAATAACCCGCCGGATCATGTAGTAGAAGACAAGCTGCCGGAAGAGAAGCTCAACACCATGGCTCTACGAATGTCGTTCTACTGCCGGGTGATGAACGGCTTTGGTGCTCTGGCTCTTGCATGGGCCACGGTGGTGCTGCTAGGTGGATACGCCACCCTCATCAAACCGAAGGACTTCTGGTTGGTGACCATCCTCATCTTCTTGGAAGCAACATGGCTTTTCAACACTTCCAAAGCCGAGGACCAATTCTTCATTCGCCTTCCTGAAGCAATAATCAAGCCTGACAGAATTGCTGTACTTGGGCGCGGAAGTTGGCGGAGTTATAGAAGCGACGAAGAGAAGCCTGACGACAAACAAAAGAT-ATTTTTTGAGTTGCTTCCGGCCTTCAAAAATGGTCACTCCTGCTTGGTGATCCTATGTCAGACCACCCTTGGATATGTGCAGCTGGCTGCACTGATCGGTACCATGGTTGTCAGTTCGTTGCGCCTGAAAAGGCAAGATTATGTCTATCCAATCTATCAACAAAGTGATGACCATAAGAACATCAGGTGGTCCCTGAACATCTTCTATGGATTGGCGCTCTCCCGGTGCATTGTCTATTTCCTGATTACGATCTTGGCAAACCCGTTGAAACGGGTGCGACGCGTTGGCTTCACGTATAACTTAGGATTTTGGGGTGAGCTATCTCTTACTCGATATGTTGAGGAATGTTATCTGAAATGCGTCAGTGGTGATTTTCATGGTGCAATCAACATGGATTTGGTTAGCTTTTCAAAAGATCTGCTAAGTTCCGACTCGATAGAGAACCACCTTATAGGATTTCGTATTCTCGACCACCTTCTCAGAAGCAAAATGTACAAACAGAGAGTGCTGAAGAAGATTCGAGTTTCCATTGGCACAATTCAGATGGCAGTCCACATGCTGAGCTTGAAGATTGACATGGACATGGACATAGACACAAGAGGGCATGCTGCACGTGTATTGCTTGAGCTCGCGCCTGACCTCCAGGTGGAGAGCTTTCCTGGTATCCTGCCTTCAATCTCCTCGCTGCTCAGCACAAACAAAGGGGTCACCAACAGTGAAAGCTCCAGCAACACAATCACTGTCATGAAAGAGTTCAAGCTG]
[+] EMBL CB633836 [ACTCGCTCGATCGAGAGCAATACAATGTCGCATAACTCCAACCACTACGCGACGACGAACCAGCATAGCCACGACGATGAACGCTGCCAGGGCAGCTTCGTCATGGCAGTGCCGCCGTCAGAGAATGATAGTGATGATGATAATAACCCGCCGGATCATGTAGTAGAAGACAAGCTGCCGGAAGAGAAGCTCAACACCATGGCTCTACGAATGTCGTTCTACTGCCGGGTGATGAACGGCTTTGGTGCTCTGGCTCTTGCATGGGCCACGGTGGTGCTGCTAGGTGGATACGCCACCCTCATCAAACCGAAGGACTTCTGGTTGGTGACCATCCTCATCTTCTTGGAAGCAACATGGCTTTTCAACACTTCCAAAGCCGAGGACCAATTCTTCATTCGCCTTCCTGAAGCAATAATCAAGCCTGACAGAATTGCTGTACTTGGGCGCGGAAGTTGGCGGAGTTATAGAAGCGACGAAGAGAAGCCTGACGACAAACAAAAGAT ATTTTTTGAGTTGCTTCCGGCCTTCAAAAATGGTCACTCCTGCTTGGTGATCCTATGTCAGACCACCCTTGGATATGTGCAGCTGGCTGCACTGATCGGTACCATGGTTGTCAGTTCGTTGCGCCTGAAAAGGCAAGATTATGTCTATCCAATCTATCAACAAAGTGATGACCATAAGAACATCAGGTGGTCCCTGAACATCTTCTATGGATTGGCGCTCTCCCGGTGCATTGTCTATTTCCTGATTACGATCTTGGCAAACCCGTTGAAACGGGTGCGACGCGTTGGCTTCACGTATAACTTAGGATTCTGGGGTGAG ]
[+] EMBL CB634685 [ CATAACTCCCACCACTACGCGACGACGAACCAGCATAGCCACGACGATGAACGCTGCCAGGGCAGCTTCGTCATGGCAGTGCCGCCGTCAGAGAATGATAGTGATGATGATAATAACCCGCCGGATCATGTAGTAGAAGACAAGCTGCCGGAAGAGAAGCTCAACACCATGGCTCTACGAATGTCGTTCTACTGCCGGGTGATGAACGGCTTTGGTGCTCTGGCTCTTGCATGGGCCACGGTGGTGCTGCTAGGTGGATACGCCACCCTCATCAAACCGAAGGACTTCTGGTTGGTGACCATCCTCATCTTCTTGGAAGCAACATGGCTTTTCAACACTTCCAAAGCCGAGGACCAATTCTTCATTCGCCTTCCTGAAGCAATAATCAAGCCTGACAGAATTGCTGTACTTGGGCGCGGAAGTTGGCGGAGTTATAGAAGCGACGAAGAGAAGCCTGACGACAAACAAAAGAT ATTTTTTGAGTTGCTTCCGGCCTTCAAAAATGGTCACTCCTGCTTGGTGATCCTATGTCAGACCACCCTTGGATATGTGCAGCTGGCTGCACTGATCGGTACCATGGTTGTCAGTTCGTTGCGCCTGAAAAGGCAAGATTATGTCTATCCAATCTATCAACAAAGTGATGACCATAAGAACATCAGGTGGTCCCTGAACATCTTCTATGGATTGGCGCTCTCCCGGTGCATTGTCTATTTCCTGATTACGATCTTGGCAAACCCGTTGAAACGGGTGCGACGCGTTGGCTTCACGTATAACTTAGGATTTTGGGGTGAGCTATCTCTTACTCGATATGTTGAGGAATGTTATCTGAAATGCGTCAGTGGTGATTTTCATGGgtg ]
[+] EMBL CB628209 [ AGCTCCCTGAAGAGAAGCTCAACACCATGGCTCTACGAATGTCGTTCTACTGCCGGGTGATGAACGGCTTTGGTGCTCTGGCTCTTGCATGGGCCACGGTGGTGCTGCTAGGTGGATACGCCACCCTCATCAAACCGAAGGACTTCTGGTTGGTGACCATCCTCATCTTCTTGGAAGCAACATGGCTTTTCAACACTTCCAAAGCCGAGGACCAATTCTTCATTCGCCTTCCTGAAGCAATAATCAAGCCTGACAGAATTGCTGTACTTGGGCGCGGAAGTTGGCGGAGTTATAGAAGCGACGAAGAGAAGCCTGACGACAAACAAAAGAT ATTTTTTGAGTTGCTTCCGGCCTTCAAAAATGGTCACTCCTGCTTGGTGATCCTATGTCAGACCACCCTTGGATATGTGCAGCTGGCTGCACTGATCGGTACCATGGTTGTCAGTTCGTTGCGCCTGAAAAGGCAAGATTATGTCTATCCAATCTATCAACAAAGTGATGACCATAAGAACATCAGGTGGTCCCTGAACATCTTCTATGGATTGGCGCTCTCCCGGTGCATTGTCTATTTCCTGATTACGATCTTGGCAAACCCGTTGAAACGGGTGCGACGCGTTGGCTTCACGTATAACTTAGGATTTTGGGGTGAGCTATCTCTTACTCGATATGTTGAGGAATGTTATCTGAAATGCGTCAGTGGTGATTTTCATGGTGCAATCAACATGGATTTGGT ]
[+] EMBL CB629057 [ GGAAGCAACATGGCTTTTCCACACTTCCAAAGACGAGGACCAATTCTTCATTCGCCTTGCTGAAGCAATAATCAAGCCTGACAGAATCGCTGTACTTGGGCGCGGAAGGTGGCGGAGTTATAGAAGCGACGAAGAGAAGCCTGACGACAAACAAAAGATCATTTTTTGAGTTGCTTCCGGCCTTCAAAAATGGTCACTCCTGCTTGGTGATGCTATGTCAAACCACCCTTGGATATGTGCAGCTGGATGCACTG ]
[+] EMBL CB630393 [ GAAGCCCGACGACAAACAAAAGAT ATTTTTTGAGTTGCTTCCGGCCTTCAAAAATGGTCACTCCTGCTTGGTGATCCTATGTCAGACCACCCTTGGATATGTGCAGCTGGCTGCACTGATCGGTACCATGGTTGTCAGTTCGTTGCGCCTGAAAAGGCAAGATTATGTCTATCCAATCTATCAACAAAGTGATGACCATAAGAACATCAGGTGGTCCCTGAACATCTTCTATGGATTGGCGCTCTCCCGGTGCATTGTCTATTTCCTGATTACGATCTTGGCAAACCCGTTGAAACGGGTGCGACGCGTTGGCTTCACGTATAACTTAGGATTTTGGGGTGAGCTATCTCTTACTCGATATGTTGAGGAATGTTATCTGAAATGCGTCAGTGGTGATTTTCATGGTGCAATCAACATGGATTTGGTTAGCTTTTCAAAAGATCTGCTAAGTTCCGACTCGATAGAGAACCACCTTATAGGATTTCGTATTCTCGACCACCTTCTCAGAAGCAAAATGTACAAACAGAGAGTGCTGAAGAAGATTCGAGTTTCCATTGGCACAATTCAGATGGCAGTCCACATGCTGAGCTTGAAGATTGACATGGACATGGACATAGACACAAGAGGGCATGCTGCACGTGTATTGCTTGAGCTCGCGCCTGACCTCCAGGTGGAGAGCTTTCCTGGTATCCTGCCTTCAATCTCCTCGCTGCTCAGCACAAACAAAGGGGTCACCAACAGTGAAAGCTCCAGCAACACAATCACTGTCATGAAAGAGTTCAAGCTG]
[+] EMBL CB635077 [ GAAGCCCGTTAACAAACAAAAGAT ATTTTTTGAGTTGCTTCCGGCCTTCAAAAATGGTCACTCCTGCTTGGTGATCCTATGTCAGACCACCCTTGGATATGTGCAGCTGGCTGCACTGATCGGTACCATGGTTGTCAGTTCGTTGCGCCTGAAAAGGCAAGATTATGTCTATCCAATCTATCAACAAAGTGATGACCATAAGAACATCAGGTGGTCCCTGAACATCTTCTATGGATTGGCGCTCTCCCGGTGCATTGTCTATTTCCTGATTACGATCTTGGCAAACCCGTTGAAACGGGTGCGACGCGTTGGCTTCACGTATAACTTAGGATTTTGGGGTGAGCTATCTCTTACTCGATATGTTGAGGAATGTTATCTGAAATGCGTCAGTGGTGATTTTCATGGTGCAATCAACATGGATTTGGTTAGCTTTTCAAAAGATCTGCTAAGTTCCGACTCGATAGAGAACCACCTTATAGGATTTCGTATTCTCGACCACCTTCTCAGAAGCAAAATGTACAAACAGAGAGTGCTGAAGAAGATTCGAGTTTCCATTGGCACAATTCAGATGGCAGTCCACATGCTGAGCTTGAAGATTGACATGGACATGGACATAGACACAAGAGGGCATGCTGCACGTGTATTGCTTGAGCTCGCGCCTGACCTCCAGGTGGAGAGCTTTCCTGGTATCCTGCCTTCAATCTCCTCGCTGCTCAGCACAAACAAAGGGGTCACCAACAGTGAAAGCTCCAGCAACACA ]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||