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Oryza sativa
cluster # 9225 cluster # 9225       Sequences # 6       consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9225#0 length = 2955 sequences # 5  
 consensus_9225#1 length = 546 sequences # 1  
consensusID : consensus_9225#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 2955
fasta sequence 
                              [ACGCTGCGGCGCTCCCCCCACGCCACCACCAAGCAACTGTTCGGCGGAATGCCACACTAGAGGCGAGACCCAAGGACACGCTCCCCACGCCGCAAACAAAGCGCCGCCGCCGCCGCCGCCGAGATGAAGGGAGCAATGCCGCCGCGGCCGTTCATGATGCCGGGGCCTGGGGGCCCGATGCCCCCGCCGCAGCAGTTCGGCCTGGTGGAGACGCGCCCGCCGCTGGCCGCCGTGCTGCGGCCGCGGTTCAACATCCCGGGCCTCCACCCCTCCGCCGCCGCGGCCTCCGCGGCGGGCAAGATCGCGTCCACCTACGACCTTGTCGAGTCGATGCGGTTCCTCTACGTGCACGTGGTGAAGGCCAAGGACCTCCCCGCTGTCTCCGCCGCCGGCACCATCGACCCCTTCGTGGAGGTGAAGCTCGGCAACTTCAAGGGCACCACGCCGGTCCTCGGCGGCAACCACAACCCGTCGTGGAAGCAGGTCTTCGCCTTCTCCGCGACGCACCTCCAGGCGCACGTGCTCGAGGTGGCCGTCAAGGCCAAAGATCTCGCCGGCGGCGACGACCTCATCGGCCGCGTGGGGTTCGACCTCTCCGAGGTGCCGATCCGTGTGCCGCCGGACTCCCCGCTGGCTCCCCAGTGGTACCGGCTCGAGAACAAGCGTGGCGAGAAGACCCGCGGCGAGATCATGCTCTCCGTGTGGCTGGGGACCCAGGCCGACGAGGCCTTCCCCGACGCCTGGCATTCCGACGCCCATGCGGCGGCCGGCCCGGGGGCCGTCGCCTCCACGCGCGCCAAGGTATACTTCTCCCCCAAGCTCGTTTACCTCCGCGTCGCCGCCATCGGAGCGCAGGACCTCGTGCCGCTGGACGCGTCGCGCCCCGCGAACTTCTGCGTCAAGCTGCAGCTCGCCGGGCAGGTGCGGCGCACGCGCCCCGGCGCGCCGCCCGGCACGTTGAACCCGATTTGGAACGAGGAGTTCATGTTCGTCGTGTCCGAGCCCTTCGACGAGCCGCTGTTCGTCACCGTCGAGGACCGCGTCGGGCCTGGCCGCGACGAGCCTCTCGGCCGCATCATGCTGCCCCTCAACGCCGCAATGCCGCGCCATGACCACTTCGGCAAGCCGGTGGAGCCGCGGTGGTACAGCCTCGCGCGCCCCAGCGACGATCCTGACAAGAAGGAAGGCAAGTTCGCGAGCAAGATACAGCTTCGGATGTCGCTGGACTTTGGGTACCATGTTCTTGATGAGTCCACCTACTACAGTAGTGATCTCCAGCCATCATCGAAGCACACACGGAAGCCAAGCATTGGGATCCTTGAGCTGGGGATTCTTGGAGCACGAAACTTGATACCAATGAAGGGGAAAGATGGGCGCACCACCGATGCTTACTGTGTTGCCAAGTATGGACCGAAGTGGGTGCGCACGAGAACCATTCTCAACACTCTGAATCCTCAGTGGAATGAGCAGTATACTTGGGAGGTGTTTGATCCTTGCACGGTGATTACAGTGGTGGTGTTTGACAATAACCAGATTGGCAAGAATGGCGATGCCCGGGATGAGAGTATCGGCAAGGTGAGAATCCGGCTCTCTACCCTGGAGACTGACAGGGTGTACACCCATTTCTACCCTTTGTTGGCTCTCAAGCCCAGTGGCCTTAAGAAGACTGGAGAGTTGCATTTGGCTGTGCGATTTACATGTACGGCATGGGTGAACATGATTGCGCTGTATGGCCGTCCATTGCTGCCAAAGATGCACTACACACAGCCAATCTCAGTGATGCAGTTGGATTACCTGAGGCACCAGGCAATGCAGATTGTCGCGGCGAGGCTTAGCCGTGCCGAGCCTCCACTTCGCAGGGAGGTTGTGGAGTACATGCTCGATGTGGGATCGCACATGTTCAGTCTCCGCCGCAGCAAGGCCAACTTCTACCGTATCACCTCGCTGTTCTGTGGTTTTGCAGCGACGGCCAAGTGGTATGATGGCATCAGAAGCTGGCGAAACCCAATTACAACCGTGTTGGTGCATATGTTGTTTCTAATACTGATCTGCTACCCAGAGCTCATCCTGCCTACCATCTTCCTCTACATGTTCATGATTGGATTATGGAACTACCGTTACAAGCCAAGGCATCCACCTTACATGGACACTAAGCTATGCCATGCTGAGTTTACAAACCCAGATGAGCTTGATGAGGAGTTTGATTCATTCCCTAGCAGCAGGCCAGCGGACATTGTAAGAATGCGCTACGATAGACTAAGGAGTGTTGGAGGTCGTGTGCAGACAGTCGTTGGTGACCTGGCGACACAAGGTGAGAGAGCCCATGCTTTGCTTAGCTGGAGAGACCCTCGGGCCACCGCCATCTTCATATTCTTGTCCCTGGTTGTTGCCATTGTGCTGTATGTGACACCATTCCAGGTTCTGCTGGTTATTGCAATGCTATACCTGTTGCGCCACCCCCGGTTCCGCAGCAGGATGCCCTCTGTGCCTTTCAACTTCTACAGGAGATTGCCTGCCAAGTCTGATATGCTCCTTTGAGCCCAATGCATTGAGAACAAGAGAAAATGGAGGAAACCCTGTAACTTTGTTTCTCTCTTCCATTCAGTTCCCTACTGATTAGCATCAGATCAGATGTGAATATACTTAAGGAGTTGGTAAATTAGAGGCAAGTTAGCGGCCAGGGAATAATGTGTTCATTCGAATGTTATTTGCTCAGATAGGCAGAAAGAAGGGATTGACTGGACCCCTTCGAGTTTGGGGGGGCAGAGTTTGTTAATGTCGTGTTTCTTGGGGTAAGAACAATAGGCAGGCGCAAGCTAATCTTCAGTGTATTTTGTTTATGGATTTGTGCCAATTTTGTTATTTTCTTCATGTAATCATGTACTACCTGTTGGATGATGATGTTTTGCATTTCTGTGTGCTTATTCCTCTTGAAGCACTCGGCCTTCTTTTTCA]

[+] EMBL AK103559             [ACGCTGCGGCGCTCCCCCCACGCCACCACCAAGCAACTGTTCGGCGGAATGCCACACTAGAGGCGAGACCCAAGGACACGCTCCCCACGCCGCAAACAAAGCGCCGCCGCCGCCGCCGCCGAGATGAAGGGAGCAATGCCGCCGCGGCCGTTCATGATGCCGGGGCCTGGGGGCCCGATGCCCCCGCCGCAGCAGTTCGGCCTGGTGGAGACGCGCCCGCCGCTGGCCGCCGTGCTGCGGCCGCGGTTCAACATCCCGGGCCTCCACCCCTCCGCCGCCGCGGCCTCCGCGGCGGGCAAGATCGCGTCCACCTACGACCTTGTCGAGTCGATGCGGTTCCTCTACGTGCACGTGGTGAAGGCCAAGGACCTCCCCGCTGTCTCCGCCGCCGGCACCATCGACCCCTTCGTGGAGGTGAAGCTCGGCAACTTCAAGGGCACCACGCCGGTCCTCGGCGGCAACCACAACCCGTCGTGGAAGCAGGTCTTCGCCTTCTCCGCGACGCACCTCCAGGCGCACGTGCTCGAGGTGGCCGTCAAGGCCAAAGATCTCGCCGGCGGCGACGACCTCATCGGCCGCGTGGGGTTCGACCTCTCCGAGGTGCCGATCCGTGTGCCGCCGGACTCCCCGCTGGCTCCCCAGTGGTACCGGCTCGAGAACAAGCGTGGCGAGAAGACCCGCGGCGAGATCATGCTCTCCGTGTGGCTGGGGACCCAGGCCGACGAGGCCTTCCCCGACGCCTGGCATTCCGACGCCCATGCGGCGGCCGGCCCGGGGGCCGTCGCCTCCACGCGCGCCAAGGTATACTTCTCCCCCAAGCTCGTTTACCTCCGCGTCGCCGCCATCGGAGCGCAGGACCTCGTGCCGCTGGACGCGTCGCGCCCCGCGAACTTCTGCGTCAAGCTGCAGCTCGCCGGGCAGGTGCGGCGCACGCGCCCCGGCGCGCCGCCCGGCACGTTGAACCCGATTTGGAACGAGGAGTTCATGTTCGTCGTGTCCGAGCCCTTCGACGAGCCGCTGTTCGTCACCGTCGAGGACCGCGTCGGGCCTGGCCGCGACGAGCCTCTCGGCCGCATCATGCTGCCCCTCAACGCCGCAATGCCGCGCCATGACCACTTCGGCAAGCCGGTGGAGCCGCGGTGGTACAGCCTCGCGCGCCCCAGCGACGATCCTGACAAGAAGGAAGGCAAGTTCGCGAGCAAGATACAGCTTCGGATGTCGCTGGACTTTGGGTACCATGTTCTTGATGAGTCCACCTACTACAGTAGTGATCTCCAGCCATCATCGAAGCACACACGGAAGCCAAGCATTGGGATCCTTGAGCTGGGGATTCTTGGAGCACGAAACTTGATACCAATGAAGGGGAAAGATGGGCGCACCACCGATGCTTACTGTGTTGCCAAGTATGGACCGAAGTGGGTGCGCACGAGAACCATTCTCAACACTCTGAATCCTCAGTGGAATGAGCAGTATACTTGGGAGGTGTTTGATCCTTGCACGGTGATTACAGTGGTGGTGTTTGACAATAACCAGATTGGCAAGAATGGCGATGCCCGGGATGAGAGTATCGGCAAGGTGAGAATCCGGCTCTCTACCCTGGAGACTGACAGGGTGTACACCCATTTCTACCCTTTGTTGGCTCTCAAGCCCAGTGGCCTTAAGAAGACTGGAGAGTTGCATTTGGCTGTGCGATTTACATGTACGGCATGGGTGAACATGATTGCGCTGTATGGCCGTCCATTGCTGCCAAAGATGCACTACACACAGCCAATCTCAGTGATGCAGTTGGATTACCTGAGGCACCAGGCAATGCAGATTGTCGCGGCGAGGCTTAGCCGTGCCGAGCCTCCACTTCGCAGGGAGGTTGTGGAGTACATGCTCGATGTGGGATCGCACATGTTCAGTCTCCGCCGCAGCAAGGCCAACTTCTACCGTATCACCTCGCTGTTCTGTGGTTTTGCAGCGACGGCCAAGTGGTATGATGGCATCAGAAGCTGGCGAAACCCAATTACAACCGTGTTGGTGCATATGTTGTTTCTAATACTGATCTGCTACCCAGAGCTCATCCTGCCTACCATCTTCCTCTACATGTTCATGATTGGATTATGGAACTACCGTTACAAGCCAAGGCATCCACCTTACATGGACACTAAGCTATGCCATGCTGAGTTTACAAACCCAGATGAGCTTGATGAGGAGTTTGATTCATTCCCTAGCAGCAGGCCAGCGGACATTGTAAGAATGCGCTACGATAGACTAAGGAGTGTTGGAGGTCGTGTGCAGACAGTCGTTGGTGACCTGGCGACACAAGGTGAGAGAGCCCATGCTTTGCTTAGCTGGAGAGACCCTCGGGCCACCGCCATCTTCATATTCTTGTCCCTGGTTGTTGCCATTGTGCTGTATGTGACACCATTCCAGGTTCTGCTGGTTATTGCAATGCTATACCTGTTGCGCCACCCCCGGTTCCGCAGCAGGATGCCCTCTGTGCCTTTCAACTTCTACAGGAGATTGCCTGCCAAGTCTGATATGCTCCTTTGAGCCCAATGCATTGAGAACAAGAGAAAATGGAGGAAACCCTGTAACTTTGTTTCTCTCTTCCATTCAGTTCCCTACTGATTAGCATCAGATCAGATGTGAATATACTTAAGGAGTTGGTAAATTAGAGGCAAGTTAGCGGCCAGGGAATAATGTGTTCATTCGAATGTTATTTGCTCAGATAGGCAGAAAGAAGGGATTGACTGGACCCCTTCGAGTTTGGGGGGGCAGAGTTTGTTAATGTCGTGTTTCTTGGGGTAAGAACAATAGGCAGGCGCAAGCTAATCTTCAGTGTATTTTGTTTATGGATTTGTGCCAATTTTGTTATTTTCTTCATGTAATCATGTACTACCTGTTGGATGAT                                                        ]
[+] EMBL AK069203             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         AAGGCCAAAGATCTCGCCGGCGGCGACGACCTCATCGGCCGCGTGGGGTTCGACCTCTCCGAGGTGCCGATCCGTGTGCCGCCGGACTCCCCGCTGGCTCCCCAGTGGTACCGGCTCGAGAACAAGCGTGGCGAGAAGACCCGCGGCGAGATCATGCTCTCCGTGTGGCTGGGGACCCAGGCCGACGAGGCCTTCCCCGACGCCTGGCATTCCGACGCCCATGCGGCGGCCGGCCCGGGGGCCGTCGCCTCCACGCGCGCCAAGGTATACTTCTCCCCCAAGCTCGTTTACCTCCGCGTCGCCGCCATCGGAGCGCAGGACCTCGTGCCGCTGGACGCGTCGCGCCCCGCGAACTTCTGCGTCAAGCTGCAGCTCGCCGGGCAGGTGCGGCGCACGCGCCCCGGCGCGCCGCCCGGCACGTTGAACCCGATTTGGAACGAGGAGTTCATGTTCGTCGTGTCCGAGCCCTTCGACGAGCCGCTGTTCGTCACCGTCGAGGACCGCGTCGGGCCTGGCCGCGACGAGCCTCTCGGCCGCATCATGCTGCCCCTCAACGCCGCAATGCCGCGCCATGACCACTTCGGCAAGCCGGTGGAGCCGCGGTGGTACAGCCTCGCGCGCCCCAGCGACGATCCTGACAAGAAGGAAGGCAAGTTCGCGAGCAAGATACAGCTTCGGATGTCGCTGGACTTTGGGTACCATGTTCTTGATGAGTCCACCTACTACAGTAGTGATCTCCAGCCATCATCGAAGCACACACGGAAGCCAAGCATTGGGATCCTTGAGCTGGGGATTCTTGGAGCACGAAACTTGATACCAATGAAGGGGAAAGATGGGCGCACCACCGATGCTTACTGTGTTGCCAAGTATGGACCGAAGTGGGTGCGCACGAGAACCATTCTCAACACTCTGAATCCTCAGTGGAATGAGCAGTATACTTGGGAGGTGTTTGATCCTTGCACGGTGATTACAGTGGTGGTGTTTGACAATAACCAGATTGGCAAGAATGGCGATGCCCGGGATGAGAGTATCGGCAAGGTGAGAATCCGGCTCTCTACCCTGGAGACTGACAGGGTGTACACCCATTTCTACCCTTTGTTGGCTCTCAAGCCCAGTGGCCTTAAGAAGACTGGAGAGTTGCATTTGGCTGTGCGATTTACATGTACGGCATGGGTGAACATGATTGCGCTGTATGGCCGTCCATTGCTGCCAAAGATGCACTACACACAGCCAATCTCAGTGATGCAGTTGGATTACCTGAGGCACCAGGCAATGCAGATTGTCGCGGCGAGGCTTAGCCGTGCCGAGCCTCCACTTCGCAGGGAGGTTGTGGAGTACATGCTCGATGTGGGATCGCACATGTTCAGTCTCCGCCGCAGCAAGGCCAACTTCTACCGTATCACCTCGCTGTTCTGTGGTTTTGCAGCGACGGCCAAGTGGTATGATGGCATCAGAAGCTGGCGAAACCCAATTACAACCGTGTTGGTGCATATGTTGTTTCTAATACTGATCTGCTACCCAGAGCTCATCCTGCCTACCATCTTCCTCTACATGTTCATGATTGGATTATGGAACTACCGTTACAAGCCAAGGCATCCACCTTACATGGACACTAAGCTATGCCATGCTGAGTTTACAAACCCAGATGAGCTTGATGAGGAGTTTGATTCATTCCCTAGCAGCAGGCCAGCGGACATTGTAAGAATGCGCTACGATAGACTAAGGAGTGTTGGAGGTCGTGTGCAGACAGTCGTTGGTGACCTGGCGACACAAGGTGAGAGAGCCCATGCTTTGCTTAGCTGGAGAGACCCTCGGGCCACCGCCATCTTCATATTCTTGTCCCTGGTTGTTGCCATTGTGCTGTATGTGACACCATTCCAGGTTCTGCTGGTTATTGCAATGCTATACCTGTTGCGCCACCCCCGGTTCCGCAGCAGGATGCCCTCTGTGCCTTTCAACTTCTACAGGAGATTGCCTGCCAAGTCTGATATGCTCCTTTGAGCCCAATGCATTGAGAACAAGAGAAAATGGAGGAAACCCTGTAACTTTGTTTCTCTCTTCCATTCAGTTCCCTACTGATTAGCATCAGATCAGATGTGAATATACTTAAGGAGTTGGTAAATTAGAGGCAAGTTAGCGGCCAGGGAATAATGTGTTCATTCGAATGTTATTTGCTCAGATAGGCAGAAAGAAGGGATTGACTGGACCCCTTCGAGTTTGGGGGGGCAGAGTTTGTTAATGTCGTGTTTCTTGGGGTAAGAACAATAGGCAGGCGCAAGCTAATCTTCAGTGTATTTTGTTTATGGATTTGTGCCAATTTTGTTATTTTCTTCATGTAATCATGTACTACCTGTTGGATGATGATGTTTTGCATTTCTGTGTGCTTATTCCTCTTGAAGCACTCGGCCTTCTTTTTCA]
[+] EMBL CA753530             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            TCGGAGCGCAGGACCTCGTGCCGCTGGACGCGTCGCGCCCCGCGAACTTCTGCGTCAAGCTGCAGCTCGCCGGGCAGGTGCGGCGCACGCGCCCCGGCGCGCCGCCCGGCACGTTGAACCCGATTTGGAACGAGGAGTTCATGTTCGTCGTGTCCGAGCCCTTCGACGAGCCGCTGTTCGTCACCGTCGAGGACCGCGTCGGGCCTGGCCGCGACGAGCCTCTCGGCCGCATCATGCTGCCCCTCAACGCCGCAATGCCGCGCCATGACCACTTCGGCAAGCCGGTGGAGCCGCGGTGGTACAGCCTCGCGCGCCCCAGCGACGATCCTGACAAGAAGGAAGGCAAGTTCGCGAGCAAGATACAGCTTCGGATGTCGCTGGACTTTGGGTACCATGTNCTTGATGAGTCCACCTACTACAGTAGTGATCTCCAGCCATCATCGAAGCACACACGGAAGCCAAGCATTGGGATCCTTGAGCTGGGGATNCTTGGAGCACGAAACTTGATACCAATGAAGGGGAAAGATGGGCGCACCACCGATGCTTACTGTGTTGCCAAGTATGGACCGAAGTGGGTGCGCACGAGAACCATCCTCAACACTCTGAATCC CAGTGGAATGAGCAGTATAC TGGGAGGTG TTGATCC TGCAC GTGA TACGGTGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL AK059651             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              CTCAACGCCGCAATGCCGCGCCATGACCACTTCGGCAAGCCGGTGGAGCCGCGGTGGTACAGCCTCGCGCGCCCCAGCGACGATCCTGACAAGAAGGAAGGCAAGTTCGCGAGCAAGATACAGCTTCGGATGTCGCTGGACTTTGGGTACCATGTTCTTGATGAGTCCACCTACTACAGTAGTGATCTCCAGCCATCATCGAAGCACACACGGAAGCCAAGCATTGGGATCCTTGAGCTGGGGATTCTTGGAGCACGAAACTTGATACCAATGAAGGGGAAAGATGGGCGCACCACCGATGCTTACTGTGTTGCCAAGTATGGACCGAAGTGGGTGCGCACGAGAACCATTCTCAACACTCTGAATCCTCAGTGGAATGAGCAGTATACTTGGGAGGTGTTTGATCCTTGCACGGTGATTACAGTGGTGGTGTTTGACAATAACCAGATTGGCAAGAATGGCGATGCCCGGGATGAGAGTATCGGCAAGGTGAGAATCCGGCTCTCTACCCTGGAGACTGACAGGGTGTACACCCATTTCTACCCTTTGTTGGCTCTCAAGCCCAGTGGCCTTAAGAAGACTGGAGAGTTGCATTTGGCTGTGCGATTTACATGTACGGCATGGGTGAACATGATTGCGCTGTATGGCCGTCCATTGCTGCCAAAGATGCACTACACACAGCCAATCTCAGTGATGCAGTTGGATTACCTGAGGCACCAGGCAATGCAGATTGTCGCGGCGAGGCTTAGCCGTGCCGAGCCTCCACTTCGCAGGGAGGTTGTGGAGTACATGCTCGATGTGGGATCGCACATGTTCAGTCTCCGCCGCAGCAAGGCCAACTTCTACCGTATCACCTCGCTGTTCTGTGGTTTTGCAGCGACGGCCAAGTGGTATGATGGCATCAGAAGCTGGCGAAACCCAATTACAACCGTGTTGGTGCATATGTTGTTTCTAATACTGATCTGCTACCCAGAGCTCATCCTGCCTACCATCTTCCTCTACATGTTCATGATTGGATTATGGAACTACCGTTACAAGCCAAGGCATCCACCTTACATGGACACTAAGCTATGCCATGCTGAGTTTACAAACCCAGATGAGCTTGATGAGGAGTTTGATTCATTCCCTAGCAGCAGGCCAGCGGACATTGTAAGAATGCGCTACGATAGACTAAGGAGTGTTGGAGGTCGTGTGCAGACAGTCGTTGGTGACCTGGCGACACAAGGTGAGAGAGCCCATGCTTTGCTTAGCTGGAGAGACCCTCGGGCCACCGCCATCTTCATATTCTTGTCCCTGGTTGTTGCCATTGTGCTGTATGTGACACCATTCCAGGTTCTGCTGGTTATTGCAATGCTATACCTGTTGCGCCACCCCCGGTTCCGCAGCAGGATGCCCTCTGTGCCTTTCAACTTCTACAGGAGATTGCCTGCCAAGTCTGATATGCTCCTTTGAGCCCAATGCATTGAGAACAAGAGAAAATGGAGGAAACCCTGTAACTTTGTTTCTCTCTTCCATTCAGTTCCCTACTGATTAGCATCAGATCAGATGTGAATATACTTAAGGAGTTGGTAAATTAGAGGCAAGTTAGCGGCCAGGGAATAATGTGTTCATTCGAATGTTATTTGCTCAGATAGGCAGAAAGAAGGGATTGACTGGACCCCTTCGAGTTTGGGGGGGCAGAGTTTGTTAATGTCGTGTTTCTTGGGGTAAGAACAATAGGCAGGCGCAAGCTAATCTTCAGTGTATTTTGTTTATGGATTTGTGCCAATTTTGTTATTTTCTTCATGTAATCATGTACTAC                                                                    ]
[-] EMBL CF332342             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GTTGCCATTGTGCTGTATGTGACACCATTCCAGGTTCTGCTGGTTATTGCAATGCTATACCTGTTGCGCCACCCCCGGTTCCGCAGCAGGATGCCCTCTGTGCCTTTCAACTTCTACAGGAGATTGCCTGCCAAGTCTGATATGCTCCTTTGAGCCCAATGCATTGAGAACAAGAGAAAATGGAGGAAACCCTGTAACTTTGTTTCTCTCTTCCATTCAGTTCCCTACTGATTAGCATCAGATCAGATGTGAATATACTTAAGGAGTTGGTAAATTAGAGGCAAGTTAGCGGCCAGGGAATAATGTGTTCATTCGAATGTTATTTGCTCAGATAGGCAGAAAGAAGGGATTGACTGGACCCCTTCGAGTTTGGGGGGGCAGAGTTTGTTAATGTCGTGTTTCTTGGGGTAAGAACAATAGGCAGGCGCAAGCTAATTTTCAGTGTATTTTGTTTATGGATTTGTGCCAATTTTGTTATTTTTTTCATGTAATCATGTACTACCTGTTGGATGAaaaaaaaa                                                 ]




>consensus_9225#0
ACGCTGCGGCGCTCCCCCCACGCCACCACCAAGCAACTGTTCGGCGGAATGCCACACTAG
AGGCGAGACCCAAGGACACGCTCCCCACGCCGCAAACAAAGCGCCGCCGCCGCCGCCGCC
GAGATGAAGGGAGCAATGCCGCCGCGGCCGTTCATGATGCCGGGGCCTGGGGGCCCGATG
CCCCCGCCGCAGCAGTTCGGCCTGGTGGAGACGCGCCCGCCGCTGGCCGCCGTGCTGCGG
CCGCGGTTCAACATCCCGGGCCTCCACCCCTCCGCCGCCGCGGCCTCCGCGGCGGGCAAG
ATCGCGTCCACCTACGACCTTGTCGAGTCGATGCGGTTCCTCTACGTGCACGTGGTGAAG
GCCAAGGACCTCCCCGCTGTCTCCGCCGCCGGCACCATCGACCCCTTCGTGGAGGTGAAG
CTCGGCAACTTCAAGGGCACCACGCCGGTCCTCGGCGGCAACCACAACCCGTCGTGGAAG
CAGGTCTTCGCCTTCTCCGCGACGCACCTCCAGGCGCACGTGCTCGAGGTGGCCGTCAAG
GCCAAAGATCTCGCCGGCGGCGACGACCTCATCGGCCGCGTGGGGTTCGACCTCTCCGAG
GTGCCGATCCGTGTGCCGCCGGACTCCCCGCTGGCTCCCCAGTGGTACCGGCTCGAGAAC
AAGCGTGGCGAGAAGACCCGCGGCGAGATCATGCTCTCCGTGTGGCTGGGGACCCAGGCC
GACGAGGCCTTCCCCGACGCCTGGCATTCCGACGCCCATGCGGCGGCCGGCCCGGGGGCC
GTCGCCTCCACGCGCGCCAAGGTATACTTCTCCCCCAAGCTCGTTTACCTCCGCGTCGCC
GCCATCGGAGCGCAGGACCTCGTGCCGCTGGACGCGTCGCGCCCCGCGAACTTCTGCGTC
AAGCTGCAGCTCGCCGGGCAGGTGCGGCGCACGCGCCCCGGCGCGCCGCCCGGCACGTTG
AACCCGATTTGGAACGAGGAGTTCATGTTCGTCGTGTCCGAGCCCTTCGACGAGCCGCTG
TTCGTCACCGTCGAGGACCGCGTCGGGCCTGGCCGCGACGAGCCTCTCGGCCGCATCATG
CTGCCCCTCAACGCCGCAATGCCGCGCCATGACCACTTCGGCAAGCCGGTGGAGCCGCGG
TGGTACAGCCTCGCGCGCCCCAGCGACGATCCTGACAAGAAGGAAGGCAAGTTCGCGAGC
AAGATACAGCTTCGGATGTCGCTGGACTTTGGGTACCATGTTCTTGATGAGTCCACCTAC
TACAGTAGTGATCTCCAGCCATCATCGAAGCACACACGGAAGCCAAGCATTGGGATCCTT
GAGCTGGGGATTCTTGGAGCACGAAACTTGATACCAATGAAGGGGAAAGATGGGCGCACC
ACCGATGCTTACTGTGTTGCCAAGTATGGACCGAAGTGGGTGCGCACGAGAACCATTCTC
AACACTCTGAATCCTCAGTGGAATGAGCAGTATACTTGGGAGGTGTTTGATCCTTGCACG
GTGATTACAGTGGTGGTGTTTGACAATAACCAGATTGGCAAGAATGGCGATGCCCGGGAT
GAGAGTATCGGCAAGGTGAGAATCCGGCTCTCTACCCTGGAGACTGACAGGGTGTACACC
CATTTCTACCCTTTGTTGGCTCTCAAGCCCAGTGGCCTTAAGAAGACTGGAGAGTTGCAT
TTGGCTGTGCGATTTACATGTACGGCATGGGTGAACATGATTGCGCTGTATGGCCGTCCA
TTGCTGCCAAAGATGCACTACACACAGCCAATCTCAGTGATGCAGTTGGATTACCTGAGG
CACCAGGCAATGCAGATTGTCGCGGCGAGGCTTAGCCGTGCCGAGCCTCCACTTCGCAGG
GAGGTTGTGGAGTACATGCTCGATGTGGGATCGCACATGTTCAGTCTCCGCCGCAGCAAG
GCCAACTTCTACCGTATCACCTCGCTGTTCTGTGGTTTTGCAGCGACGGCCAAGTGGTAT
GATGGCATCAGAAGCTGGCGAAACCCAATTACAACCGTGTTGGTGCATATGTTGTTTCTA
ATACTGATCTGCTACCCAGAGCTCATCCTGCCTACCATCTTCCTCTACATGTTCATGATT
GGATTATGGAACTACCGTTACAAGCCAAGGCATCCACCTTACATGGACACTAAGCTATGC
CATGCTGAGTTTACAAACCCAGATGAGCTTGATGAGGAGTTTGATTCATTCCCTAGCAGC
AGGCCAGCGGACATTGTAAGAATGCGCTACGATAGACTAAGGAGTGTTGGAGGTCGTGTG
CAGACAGTCGTTGGTGACCTGGCGACACAAGGTGAGAGAGCCCATGCTTTGCTTAGCTGG
AGAGACCCTCGGGCCACCGCCATCTTCATATTCTTGTCCCTGGTTGTTGCCATTGTGCTG
TATGTGACACCATTCCAGGTTCTGCTGGTTATTGCAATGCTATACCTGTTGCGCCACCCC
CGGTTCCGCAGCAGGATGCCCTCTGTGCCTTTCAACTTCTACAGGAGATTGCCTGCCAAG
TCTGATATGCTCCTTTGAGCCCAATGCATTGAGAACAAGAGAAAATGGAGGAAACCCTGT
AACTTTGTTTCTCTCTTCCATTCAGTTCCCTACTGATTAGCATCAGATCAGATGTGAATA
TACTTAAGGAGTTGGTAAATTAGAGGCAAGTTAGCGGCCAGGGAATAATGTGTTCATTCG
AATGTTATTTGCTCAGATAGGCAGAAAGAAGGGATTGACTGGACCCCTTCGAGTTTGGGG
GGGCAGAGTTTGTTAATGTCGTGTTTCTTGGGGTAAGAACAATAGGCAGGCGCAAGCTAA
TCTTCAGTGTATTTTGTTTATGGATTTGTGCCAATTTTGTTATTTTCTTCATGTAATCAT
GTACTACCTGTTGGATGATGATGTTTTGCATTTCTGTGTGCTTATTCCTCTTGAAGCACT
CGGCCTTCTTTTTCA

consensusID : consensus_9225#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 546
fasta sequence 
                              [TGGACTGAAGGAGTAGAAAACCGTATCACCTCGCTGTTCTGTGGTTTTGCAGCGACGGCCAAGTGGTATGATGGCATCAGAAGCTGGCGAAACCCAATTACAACCGTGTTGGTGCATATGTTGTTTCTAATACTGATCTGCTACCCAGAGCTCATCCTGCCTACCATCTTCCTCTACATGTTCATGATTGGATTATGGAACTACCGTTACAAGCCAAGGCATCCACCTTACATGGACACTAAGCTATGCCATGCTGAGTTTACAAACCCAGATGAGCTTGATGAGGAGTTTGATTCATTCCCTAGCAGCAGGCCAGCGGACATTGTAAGAATGCGCTACGATAGACTAAGGAGTGTTGGAGGTCGTGTGCAGACAGTCGTTGGTGACCTGGCGACACAAGGTGAGAGAGCCCATGCTTTGCTTAGCTGGAGAGACCCTCGGGCCACCGCCATCTTCATATTCTTGTCCCTGGNTTGTTGCCATTGTGCTGTATGTGACACCATTCCAGGTTCTGCTGGTTATTGCAATGCTATACCTGTTGCGCCA]

[+] EMBL CF332341             [TGGACTGAAGGAGTAGAAAACCGTATCACCTCGCTGTTCTGTGGTTTTGCAGCGACGGCCAAGTGGTATGATGGCATCAGAAGCTGGCGAAACCCAATTACAACCGTGTTGGTGCATATGTTGTTTCTAATACTGATCTGCTACCCAGAGCTCATCCTGCCTACCATCTTCCTCTACATGTTCATGATTGGATTATGGAACTACCGTTACAAGCCAAGGCATCCACCTTACATGGACACTAAGCTATGCCATGCTGAGTTTACAAACCCAGATGAGCTTGATGAGGAGTTTGATTCATTCCCTAGCAGCAGGCCAGCGGACATTGTAAGAATGCGCTACGATAGACTAAGGAGTGTTGGAGGTCGTGTGCAGACAGTCGTTGGTGACCTGGCGACACAAGGTGAGAGAGCCCATGCTTTGCTTAGCTGGAGAGACCCTCGGGCCACCGCCATCTTCATATTCTTGTCCCTGGNTTGTTGCCATTGTGCTGTATGTGACACCATTCCAGGTTCTGCTGGTTATTGCAATGCTATACCTGTTGCGCCA]




>consensus_9225#1
TGGACTGAAGGAGTAGAAAACCGTATCACCTCGCTGTTCTGTGGTTTTGCAGCGACGGCC
AAGTGGTATGATGGCATCAGAAGCTGGCGAAACCCAATTACAACCGTGTTGGTGCATATG
TTGTTTCTAATACTGATCTGCTACCCAGAGCTCATCCTGCCTACCATCTTCCTCTACATG
TTCATGATTGGATTATGGAACTACCGTTACAAGCCAAGGCATCCACCTTACATGGACACT
AAGCTATGCCATGCTGAGTTTACAAACCCAGATGAGCTTGATGAGGAGTTTGATTCATTC
CCTAGCAGCAGGCCAGCGGACATTGTAAGAATGCGCTACGATAGACTAAGGAGTGTTGGA
GGTCGTGTGCAGACAGTCGTTGGTGACCTGGCGACACAAGGTGAGAGAGCCCATGCTTTG
CTTAGCTGGAGAGACCCTCGGGCCACCGCCATCTTCATATTCTTGTCCCTGGNTTGTTGC
CATTGTGCTGTATGTGACACCATTCCAGGTTCTGCTGGTTATTGCAATGCTATACCTGTT
GCGCCA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9225#0      ACGCTGCGGCGCTCCCCCCACGCCACCACCAAGCAACTGTTCGGCGGAATGCCACACTAG 60
consensus_9225#1      ------------------------------------------------------------
                                                                                  

consensus_9225#0      AGGCGAGACCCAAGGACACGCTCCCCACGCCGCAAACAAAGCGCCGCCGCCGCCGCCGCC 120
consensus_9225#1      ------------------------------------------------------------
                                                                                  

consensus_9225#0      GAGATGAAGGGAGCAATGCCGCCGCGGCCGTTCATGATGCCGGGGCCTGGGGGCCCGATG 180
consensus_9225#1      ------------------------------------------------------------
                                                                                  

consensus_9225#0      CCCCCGCCGCAGCAGTTCGGCCTGGTGGAGACGCGCCCGCCGCTGGCCGCCGTGCTGCGG 240
consensus_9225#1      ------------------------------------------------------------
                                                                                  

consensus_9225#0      CCGCGGTTCAACATCCCGGGCCTCCACCCCTCCGCCGCCGCGGCCTCCGCGGCGGGCAAG 300
consensus_9225#1      ------------------------------------------------------------
                                                                                  

consensus_9225#0      ATCGCGTCCACCTACGACCTTGTCGAGTCGATGCGGTTCCTCTACGTGCACGTGGTGAAG 360
consensus_9225#1      ------------------------------------------------------------
                                                                                  

consensus_9225#0      GCCAAGGACCTCCCCGCTGTCTCCGCCGCCGGCACCATCGACCCCTTCGTGGAGGTGAAG 420
consensus_9225#1      ------------------------------------------------------------
                                                                                  

consensus_9225#0      CTCGGCAACTTCAAGGGCACCACGCCGGTCCTCGGCGGCAACCACAACCCGTCGTGGAAG 480
consensus_9225#1      ------------------------------------------------------------
                                                                                  

consensus_9225#0      CAGGTCTTCGCCTTCTCCGCGACGCACCTCCAGGCGCACGTGCTCGAGGTGGCCGTCAAG 540
consensus_9225#1      ------------------------------------------------------------
                                                                                  

consensus_9225#0      GCCAAAGATCTCGCCGGCGGCGACGACCTCATCGGCCGCGTGGGGTTCGACCTCTCCGAG 600
consensus_9225#1      ------------------------------------------------------------
                                                                                  

consensus_9225#0      GTGCCGATCCGTGTGCCGCCGGACTCCCCGCTGGCTCCCCAGTGGTACCGGCTCGAGAAC 660
consensus_9225#1      ------------------------------------------------------------
                                                                                  

consensus_9225#0      AAGCGTGGCGAGAAGACCCGCGGCGAGATCATGCTCTCCGTGTGGCTGGGGACCCAGGCC 720
consensus_9225#1      ------------------------------------------------------------
                                                                                  

consensus_9225#0      GACGAGGCCTTCCCCGACGCCTGGCATTCCGACGCCCATGCGGCGGCCGGCCCGGGGGCC 780
consensus_9225#1      ------------------------------------------------------------
                                                                                  

consensus_9225#0      GTCGCCTCCACGCGCGCCAAGGTATACTTCTCCCCCAAGCTCGTTTACCTCCGCGTCGCC 840
consensus_9225#1      ------------------------------------------------------------
                                                                                  

consensus_9225#0      GCCATCGGAGCGCAGGACCTCGTGCCGCTGGACGCGTCGCGCCCCGCGAACTTCTGCGTC 900
consensus_9225#1      ------------------------------------------------------------
                                                                                  

consensus_9225#0      AAGCTGCAGCTCGCCGGGCAGGTGCGGCGCACGCGCCCCGGCGCGCCGCCCGGCACGTTG 960
consensus_9225#1      ------------------------------------------------------------
                                                                                  

consensus_9225#0      AACCCGATTTGGAACGAGGAGTTCATGTTCGTCGTGTCCGAGCCCTTCGACGAGCCGCTG 1020
consensus_9225#1      ------------------------------------------------------------
                                                                                  

consensus_9225#0      TTCGTCACCGTCGAGGACCGCGTCGGGCCTGGCCGCGACGAGCCTCTCGGCCGCATCATG 1080
consensus_9225#1      ------------------------------------------------------------
                                                                                  

consensus_9225#0      CTGCCCCTCAACGCCGCAATGCCGCGCCATGACCACTTCGGCAAGCCGGTGGAGCCGCGG 1140
consensus_9225#1      ------------------------------------------------------------
                                                                                  

consensus_9225#0      TGGTACAGCCTCGCGCGCCCCAGCGACGATCCTGACAAGAAGGAAGGCAAGTTCGCGAGC 1200
consensus_9225#1      ------------------------------------------------------------
                                                                                  

consensus_9225#0      AAGATACAGCTTCGGATGTCGCTGGACTTTGGGTACCATGTTCTTGATGAGTCCACCTAC 1260
consensus_9225#1      ------------------------------------------------------------
                                                                                  

consensus_9225#0      TACAGTAGTGATCTCCAGCCATCATCGAAGCACACACGGAAGCCAAGCATTGGGATCCTT 1320
consensus_9225#1      ------------------------------------------------------------
                                                                                  

consensus_9225#0      GAGCTGGGGATTCTTGGAGCACGAAACTTGATACCAATGAAGGGGAAAGATGGGCGCACC 1380
consensus_9225#1      ------------------------------------------------------------
                                                                                  

consensus_9225#0      ACCGATGCTTACTGTGTTGCCAAGTATGGACCGAAGTGGGTGCGCACGAGAACCATTCTC 1440
consensus_9225#1      ------------------------------------------------------------
                                                                                  

consensus_9225#0      AACACTCTGAATCCTCAGTGGAATGAGCAGTATACTTGGGAGGTGTTTGATCCTTGCACG 1500
consensus_9225#1      ------------------------------------------------------------
                                                                                  

consensus_9225#0      GTGATTACAGTGGTGGTGTTTGACAATAACCAGATTGGCAAGAATGGCGATGCCCGGGAT 1560
consensus_9225#1      ------------------------------------------------------------
                                                                                  

consensus_9225#0      GAGAGTATCGGCAAGGTGAGAATCCGGCTCTCTACCCTGGAGACTGACAGGGTGTACACC 1620
consensus_9225#1      ------------------------------------------------------------
                                                                                  

consensus_9225#0      CATTTCTACCCTTTGTTGGCTCTCAAGCCCAGTGGCCTTAAGAAGACTGGAGAGTTGCAT 1680
consensus_9225#1      ------------------------------------------------------------
                                                                                  

consensus_9225#0      TTGGCTGTGCGATTTACATGTACGGCATGGGTGAACATGATTGCGCTGTATGGCCGTCCA 1740
consensus_9225#1      ------------------------------------------------------------
                                                                                  

consensus_9225#0      TTGCTGCCAAAGATGCACTACACACAGCCAATCTCAGTGATGCAGTTGGATTACCTGAGG 1800
consensus_9225#1      ------------------------------------------------------------
                                                                                  

consensus_9225#0      CACCAGGCAATGCAGATTGTCGCGGCGAGGCTTAGCCGTGCCGAGCCTCCACTTCGCAGG 1860
consensus_9225#1      ------------------------------------------------------------
                                                                                  

consensus_9225#0      GAGGTTGTGGAGTACATGCTCGATGTGGGATCGCACATGTTCAGTCTCCGCCGCAGCAAG 1920
consensus_9225#1      ----------------------------------------------TGGACTGAAGGAGT 14
                                                                    *   * * ** *  

consensus_9225#0      GCCAACTTCTACCGTATCACCTCGCTGTTCTGTGGTTTTGCAGCGACGGCCAAGTGGTAT 1980
consensus_9225#1      AGAAA-----ACCGTATCACCTCGCTGTTCTGTGGTTTTGCAGCGACGGCCAAGTGGTAT 69
                         **     **************************************************

consensus_9225#0      GATGGCATCAGAAGCTGGCGAAACCCAATTACAACCGTGTTGGTGCATATGTTGTTTCTA 2040
consensus_9225#1      GATGGCATCAGAAGCTGGCGAAACCCAATTACAACCGTGTTGGTGCATATGTTGTTTCTA 129
                      ************************************************************

consensus_9225#0      ATACTGATCTGCTACCCAGAGCTCATCCTGCCTACCATCTTCCTCTACATGTTCATGATT 2100
consensus_9225#1      ATACTGATCTGCTACCCAGAGCTCATCCTGCCTACCATCTTCCTCTACATGTTCATGATT 189
                      ************************************************************

consensus_9225#0      GGATTATGGAACTACCGTTACAAGCCAAGGCATCCACCTTACATGGACACTAAGCTATGC 2160
consensus_9225#1      GGATTATGGAACTACCGTTACAAGCCAAGGCATCCACCTTACATGGACACTAAGCTATGC 249
                      ************************************************************

consensus_9225#0      CATGCTGAGTTTACAAACCCAGATGAGCTTGATGAGGAGTTTGATTCATTCCCTAGCAGC 2220
consensus_9225#1      CATGCTGAGTTTACAAACCCAGATGAGCTTGATGAGGAGTTTGATTCATTCCCTAGCAGC 309
                      ************************************************************

consensus_9225#0      AGGCCAGCGGACATTGTAAGAATGCGCTACGATAGACTAAGGAGTGTTGGAGGTCGTGTG 2280
consensus_9225#1      AGGCCAGCGGACATTGTAAGAATGCGCTACGATAGACTAAGGAGTGTTGGAGGTCGTGTG 369
                      ************************************************************

consensus_9225#0      CAGACAGTCGTTGGTGACCTGGCGACACAAGGTGAGAGAGCCCATGCTTTGCTTAGCTGG 2340
consensus_9225#1      CAGACAGTCGTTGGTGACCTGGCGACACAAGGTGAGAGAGCCCATGCTTTGCTTAGCTGG 429
                      ************************************************************

consensus_9225#0      AGAGACCCTCGGGCCACCGCCATCTTCATATTCTTGTCCCTGGTT-GTTGCCATTGTGCT 2399
consensus_9225#1      AGAGACCCTCGGGCCACCGCCATCTTCATATTCTTGTCCCTGGNTTGTTGCCATTGTGCT 489
                      ******************************************* * **************

consensus_9225#0      GTATGTGACACCATTCCAGGTTCTGCTGGTTATTGCAATGCTATACCTGTTGCGCCACCC 2459
consensus_9225#1      GTATGTGACACCATTCCAGGTTCTGCTGGTTATTGCAATGCTATACCTGTTGCGCCA--- 546
                      *********************************************************   

consensus_9225#0      CCGGTTCCGCAGCAGGATGCCCTCTGTGCCTTTCAACTTCTACAGGAGATTGCCTGCCAA 2519
consensus_9225#1      ------------------------------------------------------------
                                                                                  

consensus_9225#0      GTCTGATATGCTCCTTTGAGCCCAATGCATTGAGAACAAGAGAAAATGGAGGAAACCCTG 2579
consensus_9225#1      ------------------------------------------------------------
                                                                                  

consensus_9225#0      TAACTTTGTTTCTCTCTTCCATTCAGTTCCCTACTGATTAGCATCAGATCAGATGTGAAT 2639
consensus_9225#1      ------------------------------------------------------------
                                                                                  

consensus_9225#0      ATACTTAAGGAGTTGGTAAATTAGAGGCAAGTTAGCGGCCAGGGAATAATGTGTTCATTC 2699
consensus_9225#1      ------------------------------------------------------------
                                                                                  

consensus_9225#0      GAATGTTATTTGCTCAGATAGGCAGAAAGAAGGGATTGACTGGACCCCTTCGAGTTTGGG 2759
consensus_9225#1      ------------------------------------------------------------
                                                                                  

consensus_9225#0      GGGGCAGAGTTTGTTAATGTCGTGTTTCTTGGGGTAAGAACAATAGGCAGGCGCAAGCTA 2819
consensus_9225#1      ------------------------------------------------------------
                                                                                  

consensus_9225#0      ATCTTCAGTGTATTTTGTTTATGGATTTGTGCCAATTTTGTTATTTTCTTCATGTAATCA 2879
consensus_9225#1      ------------------------------------------------------------
                                                                                  

consensus_9225#0      TGTACTACCTGTTGGATGATGATGTTTTGCATTTCTGTGTGCTTATTCCTCTTGAAGCAC 2939
consensus_9225#1      ------------------------------------------------------------
                                                                                  

consensus_9225#0      TCGGCCTTCTTTTTCA 2955
consensus_9225#1      ----------------


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)