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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9255#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 2047 fasta sequence
[AAACTTTTTTTTGTGGCACACGCGTAACCTCCAACTTTCTTAATGGCATATGGGTAAAAGACTCCTGCTCCTTCGCTTCGCTTCTGTTCGTCTCTCCGCCGTGCGCCGTCCGTCGTCCGCCATGGAGGTTGCTGGCCCTCCTCCGTTGACCAGCGCTTCCCCTAGCCCCTGCCGCTCAACACCAACTGTGGCCGGATCTAGTTGTTTGGCGGCTCGCGAGAAAGAAGTTTTGGTGGTCTAGATCTGGTCAGTTCATCCTCCCTTTCGAGCTGATCTCTCACCACCGAGCCTTTTCCCCACATCCCTTCTCGTCGTTCGGTTTGAGGTGGTCAGATCTACCGGCGGCAAAGCTGCTGGATGCCCTCACTTCGTGTGGCTGTGAGATCATCGGGGTTAGAACTGCCAGAATCGCTTGGACTCGAGGAAGAAGGAGAGCGAGCAAGACGAGGGATGCAAATGGGCGACGACCTGGGTGTGGAGCGGTGACCCCAGCTATCGGATGCAGCAGTTTGCACGCGCGGGTGCAACACGGAGCACGCGCTCAGCCTGGCTGAGTAGCGAAGTTTGCCCGAATCGGGCGTTCCTCCGGAGCCTGGCTGGCGACCGCTTTTTGCACGCGCTGGGCCTGGCTGGGAGGTCCATGCAAGCAACCAACAAGGTAAATTTGTATGCATAGGTGCGGGCCAAGCCTGATGCAGGCAACCAAACAGACCCTCAGTCCATCTGCACATTGAAAATGCTCAAGGTCCAAGAGATGTGATAGTATATCAGATGGCATGCCATTGACTTGTGTGCCAGAAGATTCTATGAAGTAAAAAACTAAAATGCTTGATTTTTCTTTGCTCTCTATGGTTTATATTCAAATTTTTCTCTACTGATAGATTAATATCACTTTTGAACAGCTCTACTAAACAATTAATTTAATTTGTGTGAATTTTATGTTGGTGTCAAAATTTGGCACTTTAAGACCTTGGCATAGCAATTTCATTCTTTGTATCCCCTGCTCTAAGTTGGTATCATTTCAGTTTACTTGCTTTATAATTACTAAACTTGAAGGTCGACATGCACTTCACTGGGAAATTTTAAGTGAAACCCTGAATCCCTCAAATCTCCTATTGAACTTTATCATGAATTGCTAAAGTTGCTGATTTTCTTGAGTAGGAACCAAGCTATTCACTTAAAATTCATGTACTAGCCTCTCAAAATTTGTATGAATATTGGGGTTTTATTTTAAGAGCAAATTAGATCAGAGTTCAGAGTCTACTCATGCTGCTTGCTGTTGGGTATACCTCCCAGGGAAGGGATGCTCTTATCCATCTTCCAGGAAATTGGTGGTAGCTGATTTCAAATGCGAAATTAGTTATTATTGTTTCTGTTCTAATAGAAATTGATTTCACCGAGTCAATAACTTGCCATATTTATTTATTTACTCTTAAATTCCATTCTTATGAATGATTTGACAAACAATTTTTTCCTTGTCACAGAACAAGCATGTAAACGTGTTTGTTTACACAATACATGAAACAATATGTAGAATCATACTTTACACTGCCATTTTCTCCAAAGAGGCTGTGATAAGCACTTCTGCATCCACTTGAACTCATATATACTTGTGTGCCCTTTAATTTTGTAGGATAATTATATGAAAGAAGCCCCTCTATATCTGGAGTTAGGGAGCACATTTTTACTAGCAGGATTGTAGTTTTGTGACTAATAAGCAACAGCTGCTTGCAGACCCTCTGAAGTGAGATGTTTACCTATCTCACTATTTCACCCTCACATGTTTGTTATACAATTGAATGGATATGCATATTTTTTTAATAATATTTATTCAAATAGAGTTATCAACCACAAGAAAAAGCTAAGCAAGCATATCTTATGTTAATGTTCTTGTGTAGATTTGAAATATCATGTGATGAACAAGGTCATTTCATTTGTTGCCTTATAAACATATTAAGCAGACCATTTTAAAGTGCACTTTCACACTACTCTTTTATATGTTGTATGCTTTTGCAGCTCTACATAAGAATTTTATAATAAAAAATAC]
[+] EMBL AK100162 [AAACTTTTTTTTGTGGCACACGCGTAACCTCCAACTTTCTTAATGGCATATGGGTAAAAGACTCCTGCTCCTTCGCTTCGCTTCTGTTCGTCTCTCCGCCGTGCGCCGTCCGTCGTCCGCCATGGAGGTTGCTGGCCCTCCTCCGTTGACCAGCGCTTCCCCTAGCCCCTGCCGCTCAACACCAACTGTGGCCGGATCTAGTTGTTTGGCGGCTCGCGAGAAAGAAGTTTTGGTGGTCTAGATCTGGTCAGTTCATCCTCCCTTTCGAGCTGATCTCTCACCACCGAGCCTTTTCCCCACATCCCTTCTCGTCGTTCGGTTTGAGGTGGTCAGATCTACCGGCGGCAAAGCTGCTGGATGCCCTCACTTCGTGTGGCTGTGAGATCATCGGGGTTAGAACTGCCAGAATCGCTTGGACTCGAGGAAGAAGGAGAGCGAGCAAGACGAGGGATGCAAATGGGCGACGACCTGGGTGTGGAGCGGTGACCCCAGCTATCGGATGCAGCAGTTTGCACGCGCGGGTGCAACACGGAGCACGCGCTCAGCCTGGCTGAGTAGCGAAGTTTGCCCGAATCGGGCGTTCCTCCGGAGCCTGGCTGGCGACCGCTTTTTGCACGCGCTGGGCCTGGCTGGGAGGTCCATGCAAGCAACCAACAAGGTAAATTTGTATGCATAGGTGCGGGCCAAGCCTGATGCAGGCAACCAAACAGACCCTCAGTCCATCTGCACATTGAAAATGCTCAAGGTCCAAGAGATGTGATAGTATATCAGATGGCATGCCATTGACTTGTGTGCCAGAAGATTCTATGAAGTAAAAAACTAAAATGCTTGATTTTTCTTTGCTCTCTATGGTTTATATTCAAATTTTTCTCTACTGATAGATTAATATCACTTTTGAACAGCTCTACTAAACAATTAATTTAATTTGTGTGAATTTTATGTTGGTGTCAAAATTTGGCACTTTAAGACCTTGGCATAGCAATTTCATTCTTTGTATCCCCTGCTCTAAGTTGGTATCATTTCAGTTTACTTGCTTTATAATTACTAAACTTGAAGGTCGACATGCACTTCACTGGGAAATTTTAAGTGAAACCCTGAATCCCTCAAATCTCCTATTGAACTTTATCATGAATTGCTAAAGTTGCTGATTTTCTTGAGTAGGAACCAAGCTATTCACTTAAAATTCATGTACTAGCCTCTCAAAATTTGTATGAATATTGGGGTTTTATTTTAAGAGCAAATTAGATCAGAGTTCAGAGTCTACTCATGCTGCTTGCTGTTGGGTATACCTCCCAGGGAAGGGATGCTCTTATCCATCTTCCAGGAAATTGGTGGTAGCTGATTTCAAATGCGAAATTAGTTATTATTGTTTCTGTTCTAATAGAAATTGATTTCACCGAGTCAATAACTTGCCATATTTATTTATTTACTCTTAAATTCCATTCTTATGAATGATTTGACAAACAATTTTTTCCTTGTCACAGAACAAGCATGTAAACGTGTTTGTTTACACAATACATGAAACAATATGTAGAATCATACTTTACACTGCCATTTTCTCCAAAGAGGCTGTGATAAGCACTTCTGCATCCACTTGAACTCATATATACTTGTGTGCCCTTTAATTTTGTAGGATAATTATATGAAAGAAGCCCCTCTATATCTGGAGTTAGGGAGCACATTTTTACTAGCAGGATTGTAGTTTTGTGACTAATAAGCAACAGCTGCTTGCAGACCCTCTGAAGTGAGATGTTTACCTATCTCACTATTTCACCCTCACATGTTTGTTATACAATTGAATGGATATGCATATTTTTTTAATAATATTTATTCAAATAGAGTTATCAACCACAAGAAAAAGCTAAGCAAGCATATCTTATGTTAATGTTCTTGTGTAGATTTGAAATATCATGTGATGAACAAGGTCATTTCATTTGTTGCCTTATAAACATATTAAGCAGACCATTTTAAAGTGCACTTTCACACTACTCTTTTATATGTTGTATGCTTTTGCAGCTCTACATAAGAATTTTATAATAAAAAATAC]
consensusID : consensus_9255#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1671 fasta sequence
[TCTCCGCCGTGCGCCGTCCGTCGTCCGCCATGGAGGTTGCTGGCCCTCCTCCGTTGACCAGCGCTTCCCCTAGCCCCTGCCGCTCAACACCAACTGTGGCCGGATCTAGTTGTTTGGCGGCTCGCGAGAAAGAAGTTTTGGTGGTCTAGATCTGGTCAGTTCATCCTCCCTTTCGAGCTGATCTCTCACCACCGAGCCTTTTCCCCACATCCCTTCTCGTCGTTCGGTTTGAGGTGGTCAGATCTACCGGCGGCAAAGCTGCTGGATGCCCTCACTTCGTGTGGCTGTGAGATCATCGGGGTTAGAACTGCCAGAATCGCTTGGACTCGAGGAAGAAGGAGAGCGAGCAAGACGAGGGATGCAAATGGGCGACGACCTGGGTGTGGAGCGGTGACCCCAGCTATCGGATGCAGCAGTTTGCACGCGCGGGTGCAACACGGAGCACGCGCTCAGCCTGGCTGAGTAGCGAAGTTTGCCCGAATCGGGCGTTCCTCGGGAGCCTGGCTGGCGACCGCTTTTTGCACGCGCTGGGCCTGGCTGGGAGGTCCATGCAAGCAACCAACAAGGATAATTATATGAAAGAAGCCCCTCTATATCTGGAGTTAGGGAGCACATTTTTACTAGCAGAAATGGTGAACATGGAGTAGTGCCATATTATGTCAAGAGTTATCTTAATCTAACAGAGGATACACCGTCAACTATATCTTTCTCCATCGCACTCTCTAAAATATATATTTATCAGGTATATCCTCTTCATCACACTCTGAAATATATTTGGCTTATTTACATAATCCTATCATGCTTTCTTTCACAGGAAGATGTTTGTAGAACTTATTGATTTGGGTAATATTTATTCGTCGATGTCAACCATTTCTTGTCCACAATGAATGGTTGATCGTATTCAAGATGACAAAGCCATATTTATGCTTCATAGTTTGAGACTACTATATGGTGAGAGAAATTTATGTATGCCTACAAGAGTGCCTTGTATGATTTTTGAAAGATCACCAAAATGGATTTTCCTCAAAAGATTCTTCTGTACTTCAAATGCTACGTGTACAAAGTTCGCATATAATGAACTAGAAAAAAAATGCAGGTGGCTATGTCTAGCTATTACTATAGACCACTGCCTAACAACATCCTTATCGTACTTATCCGCAATTTTCATTGAGCCTATGCCCAATCAACCGTGCTTTTTATAAACATAGGAAGTATTACTGTTGCTTTCTTGCCCTATACATCTCTTGCATACCACCCTTGAGAGTTTCTGAGAATATTTGCAAAAAAATATTGATTAACCTTGCCATTAGCAGGAAAAAACAAAGCAATCTGAACGCAACACAGATTCAACAGGATGATCCAATGACAACAGTGAACACTATGGGTTAAGGTATCCAAACATAGCATATGCTTTCATCACCTACTGCAAACATCAGTCACCTTTTACACCAGCTGTATGCAGGTGGTGCGCCAAGCCGCCAAGGGCGCGCGCCCCAGATCCTAGTATCCTTCAACTTCAAGATGAAAGACGTAAATGAACCCATGTATGAACATGCCTACATCTAATAGGCATCCAACTATGCAAGGAAAGCCTATTTAGCCTCCATTAACTCTTGCTTTTGATTGAATAGTATCTCTCAACTCCAAAACGGGGTATAACGTCTACCCATC]
[+] EMBL AK108561 [TCTCCGCCGTGCGCCGTCCGTCGTCCGCCATGGAGGTTGCTGGCCCTCCTCCGTTGACCAGCGCTTCCCCTAGCCCCTGCCGCTCAACACCAACTGTGGCCGGATCTAGTTGTTTGGCGGCTCGCGAGAAAGAAGTTTTGGTGGTCTAGATCTGGTCAGTTCATCCTCCCTTTCGAGCTGATCTCTCACCACCGAGCCTTTTCCCCACATCCCTTCTCGTCGTTCGGTTTGAGGTGGTCAGATCTACCGGCGGCAAAGCTGCTGGATGCCCTCACTTCGTGTGGCTGTGAGATCATCGGGGTTAGAACTGCCAGAATCGCTTGGACTCGAGGAAGAAGGAGAGCGAGCAAGACGAGGGATGCAAATGGGCGACGACCTGGGTGTGGAGCGGTGACCCCAGCTATCGGATGCAGCAGTTTGCACGCGCGGGTGCAACACGGAGCACGCGCTCAGCCTGGCTGAGTAGCGAAGTTTGCCCGAATCGGGCGTTCCTCGGGAGCCTGGCTGGCGACCGCTTTTTGCACGCGCTGGGCCTGGCTGGGAGGTCCATGCAAGCAACCAACAAGGATAATTATATGAAAGAAGCCCCTCTATATCTGGAGTTAGGGAGCACATTTTTACTAGCAGAAATGGTGAACATGGAGTAGTGCCATATTATGTCAAGAGTTATCTTAATCTAACAGAGGATACACCGTCAACTATATCTTTCTCCATCGCACTCTCTAAAATATATATTTATCAGGTATATCCTCTTCATCACACTCTGAAATATATTTGGCTTATTTACATAATCCTATCATGCTTTCTTTCACAGGAAGATGTTTGTAGAACTTATTGATTTGGGTAATATTTATTCGTCGATGTCAACCATTTCTTGTCCACAATGAATGGTTGATCGTATTCAAGATGACAAAGCCATATTTATGCTTCATAGTTTGAGACTACTATATGGTGAGAGAAATTTATGTATGCCTACAAGAGTGCCTTGTATGATTTTTGAAAGATCACCAAAATGGATTTTCCTCAAAAGATTCTTCTGTACTTCAAATGCTACGTGTACAAAGTTCGCATATAATGAACTAGAAAAAAAATGCAGGTGGCTATGTCTAGCTATTACTATAGACCACTGCCTAACAACATCCTTATCGTACTTATCCGCAATTTTCATTGAGCCTATGCCCAATCAACCGTGCTTTTTATAAACATAGGAAGTATTACTGTTGCTTTCTTGCCCTATACATCTCTTGCATACCACCCTTGAGAGTTTCTGAGAATATTTGCAAAAAAATATTGATTAACCTTGCCATTAGCAGGAAAAAACAAAGCAATCTGAACGCAACACAGATTCAACAGGATGATCCAATGACAACAGTGAACACTATGGGTTAAGGTATCCAAACATAGCATATGCTTTCATCACCTACTGCAAACATCAGTCACCTTTTACACCAGCTGTATGCAGGTGGTGCGCCAAGCCGCCAAGGGCGCGCGCCCCAGATCCTAGTATCCTTCAACTTCAAGATGAAAGACGTAAATGAACCCATGTATGAACATGCCTACATCTAATAGGCATCCAACTATGCAAGGAAAGCCTATTTAGCCTCCATTAACTCTTGCTTTTGATTGAATAGTATCTCTCAACTCCAAAACGGGGTATAACGTCTACCCATC]
consensusID : consensus_9255#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1204 fasta sequence
[ATGGGTAAAAGACTCCTGCTCCTTCGCTTCGCTTCTGTTCGTCTCTCCGCCGTGCGCCGTCCGTCGTCCGCCATGGAGGTTGCTGGCCCTCCTCCGTTGACCAGCGCTTCCCCTAGCCCCTGCCGCTCAACACCAACTGTGGCCGGATCTAGTTGTTTGGCGGCTCGCGAGAAAGAAGTTTTGGTGGTCTAGATCTGGTCAGTTCATCCTCCCTTTCGAGCTGATCTCTCACCACCGAGCCTTTTCCCCACATCCCTTCTCGTCGTTCGGTTTGAGGTGGTCAGATCTACCGGCGGCAAAGCTGCTGGATGCCCTCACTTCGTGTGGCTGTGAGATCATCGGGGTTAGAACTGCCAGAATCGCTTGGACTCGAGGAAGAAGGAG-AGCGAGCAAGACGAGGGATGCAAATGGGCGACGACCT-GGGTGTGGAGCGGTGACCCCAGCTATCGGATGCAGCAGTTTGCACGCGCGGGTGCAACACGGAGCACGCGCTCAGCCTGGCTGAGTAGCGAAGTTTGCCCGAATCGGGCGTTCCTCCGGAGCCTGGCTGGCGACCGCTTTTTGCACGCGCTGGGCCTGGCTGGGAGGTCCATGCAAGCAACCAACAAGGATAATTATATGAAAGAAGCCCCTCTATATCTGGAGTTAGGGAGCACATTTTTACTAGCAGAAATGGTGAACATGGAGTAGTGCCATATTATGTCAAGAGTTATCTTAATCTAACAGAGGATACACCGTCAACTATATCTTTCTCCATCGCACTCTCTAAAATATATATTTATCAGGAAGATGTTTGTAGAACTTATTGATTTGGGTAATATTTATTCGTCGATGTCAACCATTTCTTGTCCACAATGAATGGTTGATCGTATTCAAGATGACAAAGCCATATTTATGCTTCATAGTTTGAGACTACTATATGGAAAAAACAAAGCAATCTGAACGCAACACAGATTCAACAGGATGATCCAATGACAACAGTGAACACTATGGGTTAAGGTATCCAAACATAGCATATGCTTTCATCACCTACTGCAAACATCAGTCACCTTTTACACCAGCTGTATGCAGGTGGTGCGCCAAGCCGCCAAGGGCGCGCGCCCCAGATCCTAGTATCCTTCAACTTCAAGATGAAAGACGTAAATGAACCCATGTATGAACATGCCTACATCTAATAGGCATCCAACTATGCAAGGAAAGCCTA]
[+] EMBL AK103179 [ATGGGTAAAAGACTCCTGCTCCTTCGCTTCGCTTCTGTTCGTCTCTCCGCCGTGCGCCGTCCGTCGTCCGCCATGGAGGTTGCTGGCCCTCCTCCGTTGACCAGCGCTTCCCCTAGCCCCTGCCGCTCAACACCAACTGTGGCCGGATCTAGTTGTTTGGCGGCTCGCGAGAAAGAAGTTTTGGTGGTCTAGATCTGGTCAGTTCATCCTCCCTTTCGAGCTGATCTCTCACCACCGAGCCTTTTCCCCACATCCCTTCTCGTCGTTCGGTTTGAGGTGGTCAGATCTACCGGCGGCAAAGCTGCTGGATGCCCTCACTTCGTGTGGCTGTGAGATCATCGGGGTTAGAACTGCCAGAATCGCTTGGACTCGAGGAAGAAGGAG AGCGAGCAAGACGAGGGATGCAAATGGGCGACGACCT GGGTGTGGAGCGGTGACCCCAGCTATCGGATGCAGCAGTTTGCACGCGCGGGTGCAACACGGAGCACGCGCTCAGCCTGGCTGAGTAGCGAAGTTTGCCCGAATCGGGCGTTCCTCCGGAGCCTGGCTGGCGACCGCTTTTTGCACGCGCTGGGCCTGGCTGGGAGGTCCATGCAAGCAACCAACAAGGATAATTATATGAAAGAAGCCCCTCTATATCTGGAGTTAGGGAGCACATTTTTACTAGCAGAAATGGTGAACATGGAGTAGTGCCATATTATGTCAAGAGTTATCTTAATCTAACAGAGGATACACCGTCAACTATATCTTTCTCCATCGCACTCTCTAAAATATATATTTATCAGGAAGATGTTTGTAGAACTTATTGATTTGGGTAATATTTATTCGTCGATGTCAACCATTTCTTGTCCACAATGAATGGTTGATCGTATTCAAGATGACAAAGCCATATTTATGCTTCATAGTTTGAGACTACTATATGGAAAAAACAAAGCAATCTGAACGCAACACAGATTCAACAGGATGATCCAATGACAACAGTGAACACTATGGGTTAAGGTATCCAAACATAGCATATGCTTTCATCACCTACTGCAAACATCAGTCACCTTTTACACCAGCTGTATGCAGGTGGTGCGCCAAGCCGCCAAGGGCGCGCGCCCCAGATCCTAGTATCCTTCAACTTCAAGATGAAAGACGTAAATGAACCCATGTATGAACATGCCTACATCTAATAGGCATCCAACTATGCAAGGAAAGCCTA]
[+] EMBL OSS2272A [ AAAAGACTCCTGCTCCTTCGCTTCGCTTCTGTTCGTCTCTCCGCCGTGCGCCGTCCGTCGTCCGCCATGGAGGTTGCTGGCCCTCCTCCGTTGACCAGCGCTTCCCCTAGCCCCTGCCGCTCAACACCAACTGTGGCCGGATCTAGTTGTTTGGCGGCTCGCGAGAAAGAAGTTTTGGTGGTCTAGATCTGGTCAGTTCATCCTCCCTTTCGAGCTGATCTCTCACCACCGAGCCTTTTCCCCACATCCCTTCTCGTCGTTCGGTTTGAGGTGGTCAGATCTACCGGCGGCAAAGCTGCTGGATGCCCTCACTTCGTGTGGCTGTGAGATCATCGGGGTTAGAACTGCCAGAATCGCTTGGACTCGAGGAGGAAGGAGAAGCGAGCAAGACGAGGGATGCAAATGGGCGACGACCTGGGGTGTTGAGCGGTGACCCCA ]
[+] EMBL CK085112 [ CCTTCGCTTCGCTTCTGTTCGTCTCTCCGCCGTGCGCCGTCCGTCGTCCGCCATGGAGGTTGCTGGCCCTCCTCCGTTGACCAGCGCTTCCCCTAGCCCCTGCCGCTCAACACCAACTGTGGCCGGATCTAGTTGTTTGGCGGCTCGCGAGAAAGAAGTTTTGGTGGTCTAGATCTGGTCAGTTCATCCTCCCTTTCGAGCTGATCTCTCACCACCGAGCCTTTTCCCCACATCCCTTCTCGTCGTTCGGTTTGAGGTGGTCAGATCTACCGGCGGCAAAGCTGGTGGATGCCCTCACTTCGTGTGGCTGTGAGATCATCGGGGTTAGAACTGCCAGAATCGCTTGGACTCGAGGAAGAAGGAG AGCGAGCAAGACGAGGGATGCAAATGGGCGACGACCT GGGTGTGGAGCGGTGACCCCAGCTATCGGATGCAGCAGTTTGCACGCGCGGGTGCAACACGGAGCACGCGCTCAGCCTGGCTGAGTAGCGAAGTTTGCCCGAATCGG ]
consensusID : consensus_9255#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 654 fasta sequence
[GATGCAGCAGTTTGCACGCGCGGGTGCAACACGGAGCACGCGCTCAGCCTGGCTGAGCAGCGAAGTTTGCCCGAATCGGGCGTTCCTCCGGAGCCTGGCTGGCGACCGCTTTTTGCACGCGCTGGGCCTGGCTGGGAGGTCCATGCAAGCAACCAACAAGGATAATTATATGAAAGAAGCCCCTCTATATCTGGAGTTAGGGAGCACATTTTTACTAGCAGAAATGGTGAACATGGAGTAGTGCCATATTACGTCAAGAGTTATCTTAATCTAACAGAGGATACACCGTCAACTATATCTTTCTCCATCGCACTCTCTAAAATATATATTTATCAGGAAGATGTTTGTAGAACTTATTGATTTGGGTAATATTTATTGGTCGATGTCAACCATTTCTTGTCCACAATGAATGGTTGATTGTATTCAAGATGACAAAGCCATATTTATGCTTCATAGTTTGAGACTACTATATGGTGAGAGAAATTTATGTATGCCTACAAGAGTGCCTTGTATGATTTTTGAAAGATCACCAAAATGGATTTTCCTCAAAAGATTCTTCTGTACTTCAAATGCTACGTGTACAAAGTTCGCATATAATGAACTAGAAAAAAAATGCAGGTGGCTATGTCTAGCTATTACTATAAAAAAAAAAAA]
[-] EMBL CA760519 [GATGCAGCAGTTTGCACGCGCGGGTGCAACACGGAGCACGCGCTCAGCCTGGCTGAGCAGCGAAGTTTGCCCGAATCGGGCGTTCCTCCGGAGCCTGGCTGGCGACCGCTTTTTGCACGCGCTGGGCCTGGCTGGGAGGTCCATGCAAGCAACCAACAAGGATAATTATATGAAAGAAGCCCCTCTATATCTGGAGTTAGGGAGCACATTTTTACTAGCAGAAATGGTGAACATGGAGTAGTGCCATATTACGTCAAGAGTTATCTTAATCTAACAGAGGATACACCGTCAACTATATCTTTCTCCATCGCACTCTCTAAAATATATATTTATCAGGAAGATGTTTGTAGAACTTATTGATTTGGGTAATATTTATTGGTCGATGTCAACCATTTCTTGTCCACAATGAATGGTTGATTGTATTCAAGATGACAAAGCCATATTTATGCTTCATAGTTTGAGACTACTATATGGTGAGAGAAATTTATGTATGCCTACAAGAGTGCCTTGTATGATTTTTGAAAGATCACCAAAATGGATTTTCCTCAAAAGATTCTTCTGTACTTCAAATGCTACGTGTACAAAGTTCGCATATAATGAACTAGAAAAAAAATGCAGGTGGCTATGTCTAGCTATTACTATAAAAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9255#1 ------------------------------------------------------------
consensus_9255#3 ------------------------------------------------------------
consensus_9255#2 -------------------------------------------------ATGGGTAAAAG 11
consensus_9255#0 AAACTTTTTTTTGTGGCACACGCGTAACCTCCAACTTTCTTAATGGCATATGGGTAAAAG 60
consensus_9255#1 --------------------------------TCTCCGCCGTGCGCCGTCCGTCGTCCGC 28
consensus_9255#3 ------------------------------------------------------------
consensus_9255#2 ACTCCTGCTCCTTCGCTTCGCTTCTGTTCGTCTCTCCGCCGTGCGCCGTCCGTCGTCCGC 71
consensus_9255#0 ACTCCTGCTCCTTCGCTTCGCTTCTGTTCGTCTCTCCGCCGTGCGCCGTCCGTCGTCCGC 120
consensus_9255#1 CATGGAGGTTGCTGGCCCTCCTCCGTTGACCAGCGCTTCCCCTAGCCCCTGCCGCTCAAC 88
consensus_9255#3 ------------------------------------------------------------
consensus_9255#2 CATGGAGGTTGCTGGCCCTCCTCCGTTGACCAGCGCTTCCCCTAGCCCCTGCCGCTCAAC 131
consensus_9255#0 CATGGAGGTTGCTGGCCCTCCTCCGTTGACCAGCGCTTCCCCTAGCCCCTGCCGCTCAAC 180
consensus_9255#1 ACCAACTGTGGCCGGATCTAGTTGTTTGGCGGCTCGCGAGAAAGAAGTTTTGGTGGTCTA 148
consensus_9255#3 ------------------------------------------------------------
consensus_9255#2 ACCAACTGTGGCCGGATCTAGTTGTTTGGCGGCTCGCGAGAAAGAAGTTTTGGTGGTCTA 191
consensus_9255#0 ACCAACTGTGGCCGGATCTAGTTGTTTGGCGGCTCGCGAGAAAGAAGTTTTGGTGGTCTA 240
consensus_9255#1 GATCTGGTCAGTTCATCCTCCCTTTCGAGCTGATCTCTCACCACCGAGCCTTTTCCCCAC 208
consensus_9255#3 ------------------------------------------------------------
consensus_9255#2 GATCTGGTCAGTTCATCCTCCCTTTCGAGCTGATCTCTCACCACCGAGCCTTTTCCCCAC 251
consensus_9255#0 GATCTGGTCAGTTCATCCTCCCTTTCGAGCTGATCTCTCACCACCGAGCCTTTTCCCCAC 300
consensus_9255#1 ATCCCTTCTCGTCGTTCGGTTTGAGGTGGTCAGATCTACCGGCGGCAAAGCTGCTGGATG 268
consensus_9255#3 ------------------------------------------------------------
consensus_9255#2 ATCCCTTCTCGTCGTTCGGTTTGAGGTGGTCAGATCTACCGGCGGCAAAGCTGCTGGATG 311
consensus_9255#0 ATCCCTTCTCGTCGTTCGGTTTGAGGTGGTCAGATCTACCGGCGGCAAAGCTGCTGGATG 360
consensus_9255#1 CCCTCACTTCGTGTGGCTGTGAGATCATCGGGGTTAGAACTGCCAGAATCGCTTGGACTC 328
consensus_9255#3 ------------------------------------------------------------
consensus_9255#2 CCCTCACTTCGTGTGGCTGTGAGATCATCGGGGTTAGAACTGCCAGAATCGCTTGGACTC 371
consensus_9255#0 CCCTCACTTCGTGTGGCTGTGAGATCATCGGGGTTAGAACTGCCAGAATCGCTTGGACTC 420
consensus_9255#1 GAGGAAGAAGGAGAGCGAGCAAGACGAGGGATGCAAATGGGCGACGACCTGGGTGTGGAG 388
consensus_9255#3 ------------------------------------------------------------
consensus_9255#2 GAGGAAGAAGGAGAGCGAGCAAGACGAGGGATGCAAATGGGCGACGACCTGGGTGTGGAG 431
consensus_9255#0 GAGGAAGAAGGAGAGCGAGCAAGACGAGGGATGCAAATGGGCGACGACCTGGGTGTGGAG 480
consensus_9255#1 CGGTGACCCCAGCTATCGGATGCAGCAGTTTGCACGCGCGGGTGCAACACGGAGCACGCG 448
consensus_9255#3 ------------------GATGCAGCAGTTTGCACGCGCGGGTGCAACACGGAGCACGCG 42
consensus_9255#2 CGGTGACCCCAGCTATCGGATGCAGCAGTTTGCACGCGCGGGTGCAACACGGAGCACGCG 491
consensus_9255#0 CGGTGACCCCAGCTATCGGATGCAGCAGTTTGCACGCGCGGGTGCAACACGGAGCACGCG 540
******************************************
consensus_9255#1 CTCAGCCTGGCTGAGTAGCGAAGTTTGCCCGAATCGGGCGTTCCTCGGGAGCCTGGCTGG 508
consensus_9255#3 CTCAGCCTGGCTGAGCAGCGAAGTTTGCCCGAATCGGGCGTTCCTCCGGAGCCTGGCTGG 102
consensus_9255#2 CTCAGCCTGGCTGAGTAGCGAAGTTTGCCCGAATCGGGCGTTCCTCCGGAGCCTGGCTGG 551
consensus_9255#0 CTCAGCCTGGCTGAGTAGCGAAGTTTGCCCGAATCGGGCGTTCCTCCGGAGCCTGGCTGG 600
*************** ****************************** *************
consensus_9255#1 CGACCGCTTTTTGCACGCGCTGGGCCTGGCTGGGAGGTCCATGCAAGCAACCAACAAGGA 568
consensus_9255#3 CGACCGCTTTTTGCACGCGCTGGGCCTGGCTGGGAGGTCCATGCAAGCAACCAACAAGGA 162
consensus_9255#2 CGACCGCTTTTTGCACGCGCTGGGCCTGGCTGGGAGGTCCATGCAAGCAACCAACAAGGA 611
consensus_9255#0 CGACCGCTTTTTGCACGCGCTGGGCCTGGCTGGGAGGTCCATGCAAGCAACCAACAAGGT 660
***********************************************************
consensus_9255#1 TAATT-ATATGAAAGAAGCCCCTCTATATCTGGAGTTAGGGAGCACATTTTTACTAGCAG 627
consensus_9255#3 TAATT-ATATGAAAGAAGCCCCTCTATATCTGGAGTTAGGGAGCACATTTTTACTAGCAG 221
consensus_9255#2 TAATT-ATATGAAAGAAGCCCCTCTATATCTGGAGTTAGGGAGCACATTTTTACTAGCAG 670
consensus_9255#0 AAATTTGTATGCATAGGTGCGGGCCAAGCCTGATGCAGGCAACCAAACAGACCCT--CAG 718
**** **** * * * * *** * * * ** * ** ***
consensus_9255#1 AAATGGTGAACATGGAGTAGTGCCATATTATGTCAAGAGTTATCTTAATCTAACAGAGGA 687
consensus_9255#3 AAATGGTGAACATGGAGTAGTGCCATATTACGTCAAGAGTTATCTTAATCTAACAGAGGA 281
consensus_9255#2 AAATGGTGAACATGGAGTAGTGCCATATTATGTCAAGAGTTATCTTAATCTAACAGAGGA 730
consensus_9255#0 TCCATCTGCACATTGAAAATGCTCAAGGT---CCAAGAGATGTGATAGTATATCAGATGG 775
** **** ** * ** * ****** * * ** * ** **** *
consensus_9255#1 TACACCGTCAACTATATCTTTCTCCATCGCACTCTCTAAAATATATATTTATCAGGTATA 747
consensus_9255#3 TACACCGTCAACTATATCTTTCTCCATCGCACTCTCTAAAATATATATTTATCAGG---- 337
consensus_9255#2 TACACCGTCAACTATATCTTTCTCCATCGCACTCTCTAAAATATATATTTATCAGG---- 786
consensus_9255#0 CATGCCATTGAC----TTGTGTGCCAGAAGATTCTATGAAGTAAAAAACTAAAATGCTTG 831
* ** * ** * * *** * *** * ** ** * * ** * *
consensus_9255#1 TCCTCTTCATCACACTCTGAAATATATTTGGCTTATTTACATAATCCTATCATGCTTTCT 807
consensus_9255#3 ------------------------------------------------------------
consensus_9255#2 ------------------------------------------------------------
consensus_9255#0 ATTTTTCTTTGCTCTCTATGGTTTATATTCAAATTTTTCTCTACTGATAGATTAATATCA 891
consensus_9255#1 TTCACAGGAAGATGTTTGTAGAACTTA--TTGATTTGGGTAATATTTATTC----GTCGA 861
consensus_9255#3 --------AAGATGTTTGTAGAACTTA--TTGATTTGGGTAATATTTATTG----GTCGA 383
consensus_9255#2 --------AAGATGTTTGTAGAACTTA--TTGATTTGGGTAATATTTATTC----GTCGA 832
consensus_9255#0 CTTTTGAACAGCTCTACTAAACAATTAATTTAATTTGTGTGAATTTTATGTTGGTGTCAA 951
** * * * * *** ** ***** ** * ***** *** *
consensus_9255#1 TGTCAACCATTTCTTGTCCACAATGAA------TGGTTGATCGTATTC--------AAGA 907
consensus_9255#3 TGTCAACCATTTCTTGTCCACAATGAA------TGGTTGATTGTATTC--------AAGA 429
consensus_9255#2 TGTCAACCATTTCTTGTCCACAATGAA------TGGTTGATCGTATTC--------AAGA 878
consensus_9255#0 AATTTGGCACTTTAAGACCTTGGCATAGCAATTTCATTCTTTGTATCCCCTGCTCTAAGT 1011
* ** ** * ** * * ** * **** * ***
consensus_9255#1 TGACAAAGCCATA-TTTA--TGCTTCATAGTT--------TGA-----GACTACTATATG 951
consensus_9255#3 TGACAAAGCCATA-TTTA--TGCTTCATAGTT--------TGA-----GACTACTATATG 473
consensus_9255#2 TGACAAAGCCATA-TTTA--TGCTTCATAGTT--------TGA-----GACTACTATATG 922
consensus_9255#0 TGGTATCATTTCAGTTTACTTGCTTTATAATTACTAAACTTGAAGGTCGACATGCACTTC 1071
** * * **** ***** *** ** *** *** * *
consensus_9255#1 GTGAGAGAAATTTATGTATGCCTACAAG-------AGTGCCTTG-TATGATTTTTGAAAG 1003
consensus_9255#3 GTGAGAGAAATTTATGTATGCCTACAAG-------AGTGCCTTG-TATGATTTTTGAAAG 525
consensus_9255#2 GAAAAAACAAAGCA-ATCTGAACGCAAC-------ACAGATTCAACAGGATGATCCAATG 974
consensus_9255#0 ACTGGGAAATTTTAAGTGAAACCCTGAATCCCTCAAATCTCCTATTGAACTTTATCATGA 1131
* * * * * * *
consensus_9255#1 ATCACCAAAATGG---ATTTTCCT----------CAAAAGATTCTTCTGTACTTCAAATG 1050
consensus_9255#3 ATCACCAAAATGG---ATTTTCCT----------CAAAAGATTCTTCTGTACTTCAAATG 572
consensus_9255#2 ACAACAGTGAACA---CTATGGGT----------TAAGGTATCCAAACATAG--CATATG 1019
consensus_9255#0 ATTGCTAAAGTTGCTGATTTTCTTGAGTAGGAACCAAGCTATTCACTTAAAATTCATGTA 1191
* * * * * ** ** * * ** *
consensus_9255#1 CTACGTGTACAAAGTTCGCATAT-AATGA-------ACTAGAAAAAAA-----ATGCAGG 1097
consensus_9255#3 CTACGTGTACAAAGTTCGCATAT-AATGA-------ACTAGAAAAAAA-----ATGCAGG 619
consensus_9255#2 CTTTCATCACCTACTGCAAACATCAGTCA-------CCTTTTACACCAGCTGTATGCAGG 1072
consensus_9255#0 CTAGCCTCTCAAAATTTGTATGAATATTGGGGTTTTATTTTAAGAGCAAATTAGATCAGA 1251
** * * * * * * * * * ***
consensus_9255#1 TGGCTATGTCTAGCTAT------TACTATAGA--CCACTGCCTAAC--AACATCCTTATC 1147
consensus_9255#3 TGGCTATGTCTAGCTAT------TACTATAAA--AAAA-----AAA--AA---------- 654
consensus_9255#2 TGG-TGCGCCAAGCCGC------CAAGGGCGC--GCGCCCCAGATCCTAGTATCCTTCAA 1123
consensus_9255#0 GTTCAGAGTCTACTCATGCTGCTTGCTGTTGGGTATACCTCCCAGGGAAGGGATGCTCTT 1311
* * * * *
consensus_9255#1 GTACTTATCCGCAATTTTCATTGAGCCTATGCCCAATCAACCGTGCTTTTTATAAACATA 1207
consensus_9255#3 ------------------------------------------------------------
consensus_9255#2 CTTCAAGATGAAAGACGTAAATGAACCCATGTATGAACATGCCTACATCTAATAGGCATC 1183
consensus_9255#0 ATCCATCTTCCAGGAAATTGGTGGTAGCTGATTTCAAATGCGAAATTAGTTATTATTGTT 1371
consensus_9255#1 GGAAGTATTACTGTTGCTTTCTTGCCCTATACATCTCTTGCATACCACCCTTGAGAGTTT 1267
consensus_9255#3 ------------------------------------------------------------
consensus_9255#2 CAACTATGCAAGGAAAGCCTA--------------------------------------- 1204
consensus_9255#0 TCTGTTCTAATAGAAATTGATTTCACCGAGTCAATAACTTGCCATATTTATTTATTTACT 1431
consensus_9255#1 CTGAGAATATTTGCAAAAAAATATTGATTAACCTTGCCATTAGCAGGAAAAAACAAAGCA 1327
consensus_9255#3 ------------------------------------------------------------
consensus_9255#2 ------------------------------------------------------------
consensus_9255#0 CTTAAATTCCATTCTTATGAATGATTTGACAAACAATTTTTTCCTTGTCACAGAACAAGC 1491
consensus_9255#1 ATCTGAACGCAACACAGATTCAACAGGATGATCCAATGACAACAGTGAACACTATGGGTT 1387
consensus_9255#3 ------------------------------------------------------------
consensus_9255#2 ------------------------------------------------------------
consensus_9255#0 ATGTAAACGTGTTTGTTTACACAATACATGAAACAATATGTAGAATCATACTTTACACTG 1551
consensus_9255#1 AAGGTATCCAAACATAGCATATGCTTTCATCACCTACTGCAAACATCAGTCACCTTTTAC 1447
consensus_9255#3 ------------------------------------------------------------
consensus_9255#2 ------------------------------------------------------------
consensus_9255#0 CCATTTTCTCCAAAGAGGCTGTGATAAGCACTTCTGCATCCACTTGAACTCATATATACT 1611
consensus_9255#1 ACCAGCTGTATGCAGGTGGTGCGCCAAGCCGCCAAGGGCGCGCGCCCCAGATCCTAGTAT 1507
consensus_9255#3 ------------------------------------------------------------
consensus_9255#2 ------------------------------------------------------------
consensus_9255#0 TGTGTGCCCTTTAATTTTGTAGGATAATTATATGAAAGAAGCCCCTCTATATCTGGAGTT 1671
consensus_9255#1 CCTTCAACTTCAAGATGAAAGACGTAAATGAACCCATGTATGA-ACATGCCTACATCTAA 1566
consensus_9255#3 ------------------------------------------------------------
consensus_9255#2 ------------------------------------------------------------
consensus_9255#0 AGGGAGCACATTTTTACTAGCAGGATTGTAGTTTTGTGACTAATAAGCAACAGCTGCTTG 1731
consensus_9255#1 TAGGCATCCAACTATGCAAGGAAAGCCTATTTAGCCTCCATTAACTCTTGCTTTTGATTG 1626
consensus_9255#3 ------------------------------------------------------------
consensus_9255#2 ------------------------------------------------------------
consensus_9255#0 CAGACCCTCTGAAGTGAGATGTTTACCTATCTCACTATTTCACCCTCACATGTTTGTTAT 1791
consensus_9255#1 AATAGTATCTCTCAACTCCAAAACGGGGTATAACGTCTACCCATC--------------- 1671
consensus_9255#3 ------------------------------------------------------------
consensus_9255#2 ------------------------------------------------------------
consensus_9255#0 ACAATTGAATGGATATGCATATTTTTTTAATAATATTTATTCAAATAGAGTTATCAACCA 1851
consensus_9255#1 ------------------------------------------------------------
consensus_9255#3 ------------------------------------------------------------
consensus_9255#2 ------------------------------------------------------------
consensus_9255#0 CAAGAAAAAGCTAAGCAAGCATATCTTATGTTAATGTTCTTGTGTAGATTTGAAATATCA 1911
consensus_9255#1 ------------------------------------------------------------
consensus_9255#3 ------------------------------------------------------------
consensus_9255#2 ------------------------------------------------------------
consensus_9255#0 TGTGATGAACAAGGTCATTTCATTTGTTGCCTTATAAACATATTAAGCAGACCATTTTAA 1971
consensus_9255#1 ------------------------------------------------------------
consensus_9255#3 ------------------------------------------------------------
consensus_9255#2 ------------------------------------------------------------
consensus_9255#0 AGTGCACTTTCACACTACTCTTTTATATGTTGTATGCTTTTGCAGCTCTACATAAGAATT 2031
consensus_9255#1 ----------------
consensus_9255#3 ----------------
consensus_9255#2 ----------------
consensus_9255#0 TTATAATAAAAAATAC 2047
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||