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Oryza sativa
cluster # 9274 cluster # 9274       Sequences # 6       consensus # 5


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9274#0 length = 1860 sequences # 2  
consensus_9274#1 length = 669 sequences # 1  
consensus_9274#2 length = 583 sequences # 1  
consensus_9274#3 length = 342 sequences # 1  
consensus_9274#4 length = 224 sequences # 1  

consensusID : consensus_9274#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1860
fasta sequence
                              [CCACGGCGAGGTCACCGCCACGGTCTCTCGCCTCCCTCAGCTCCGTCGTCGACGTCGTCGTCTGTGAGATGGAAAATCAGGCCGTGTCGGAGATGCATGTCGTTATGGATTTGGAAGGCACGACCAAGAGGATACCGCCGATGCAGACGCCGAGGGCGCGGCTGCTGCGCAGCTGCGGCGAGTCCATCCTGGCCATGGCGCGCGGGGCGTACCGGCGCGTGGAGGCGATGCGGTGCCCGGTGGGGTGCGTGGCCAGGGGCGCCTCCCGCGCGGCGGCCCCGGTGCTGAGCCCGCTACGGCTGAGGTGCCTCTCGGCGCTCGCCTTCGCGGACAGGCAGCTCCTCGTCGTCCAGGACGTCGCCGCGGTGCTCTTCCCGGCCGCCGAGCGCGTCCTCGGCAGGGGCGCCGACGACCTCGTCCTCCTCGTCGAGTCCCTGCCCGCCAGGCTCGACGGCGCGATCGACGCCCTCGAGGCCCTCCTCGCCGGCGCCGCGGGGCTGTTCGTTCTCCCCAAGCGTTGCCGCCGCTACCGAGCCCACGAGGACGATGACGACGGCGTCGGCGGCGCCGTCTTTAGGGACATCTGGTGCGACGAGAAGGAAGCCGCGTCGTTGCACCGATCAGCAATGGAGGAAGAGGCGCGGAGGCATTCCGACGACGTGGCTCGGAAGGAACTCGAGAGCTTGGAGGTCGTCACGGCGGACGACGGCGGCGGCGGTGGCAACACCGTGCATGGCGACAAGGCTCCCGTCGACGGCGAAGGAGAGGCGGCGACTCCGGCGAAACGCGGCGACGCATCAGGTGGCCAAGAATGCGGCGTGGAGGATGTACAGCGGGTGGAGACGCCAGCTGCAGAGATCACAGATGCCATGAAGGACAGCACGGAGATCGTGAAGGATGAGGACCAGGAGAGAGGAGGCAGCGAGAGGGAAGAAGAGGAGACCTTCGCCATGGCCCGCACGGCGGAGAGCAGGGAGGAAGCATTGCTGGGTCTCTTCGATATAGCATGGCAGCAGAAGCTAGCGTAGGGTAACCAAAGGGCAAAGGTGTAACCATTGGACACTGTATAGTATAGTGTTGTGAAGTTGTAGACTTGTAGTAATCCTTGCACTGCTAGTGTCATATTGTGAACTGTCGCATACCGGATTGTAGAGAATAAAACCTGGGTACATCACAACGCATGAGCTGTTCACTGCTTCAAAAATGTAAATATCAGCAGATAGAAGCATGCAAACATTTCAAACCTCCTGAGAATGCTTTTTATTCGAAATTTGACTTCAGGATTTTGGGGGCAAGCAAAGGCTACCAGACTAATCCCGGGCAAATACNCTGCATGGTATTGCAATGTGCAGCTACGCACACATCTAGATTGATTATTTGGGTGTAGCATCGAGGGACTAGGAAACCATTAGTTCATGACTTCAGGTCATATGATCAATGTTGGATTTTACNAGTTCACTGGTTTTCACAACAACAAGAAGTCTGGTGCCGCTTTGAAGGTCCATGCATTTGGATTTTGCAGTGCGCCACAAATGGAAAACAGGCATGCTCACTCAATAAACACCTGGATCCTATCTCCCATAGCATCCTCAAAATCAAGCAGTATCTGACCGTTCTGGGGGTTTTCTGAATCAATAGGTGCATTTCGAAGCCTTTCCATGATATTAGCTCCAGCCAAACCTGGAATAACTTTTGTCATNCCTTCTAAGAATCCAGCAGGTATTCTAGCATCGATTTTCTGAACNCCATCTCTTCCTGNAATCCTTAACCGAAGTGTCCGAGACCACATNCCTGCTGAAAGGGCTCTGCCTCCAGTAGAACCAAGATCATATAGCTGAGGCAATATGTCAATAACAGGTC]

[+] EMBL AK068596             [CCACGGCGAGGTCACCGCCACGGTCTCTCGCCTCCCTCAGCTCCGTCGTCGACGTCGTCGTCTGTGAGATGGAAAATCAGGCCGTGTCGGAGATGCATGTCGTTATGGATTTGGAAGGCACGACCAAGAGGATACCGCCGATGCAGACGCCGAGGGCGCGGCTGCTGCGCAGCTGCGGCGAGTCCATCCTGGCCATGGCGCGCGGGGCGTACCGGCGCGTGGAGGCGATGCGGTGCCCGGTGGGGTGCGTGGCCAGGGGCGCCTCCCGCGCGGCGGCCCCGGTGCTGAGCCCGCTACGGCTGAGGTGCCTCTCGGCGCTCGCCTTCGCGGACAGGCAGCTCCTCGTCGTCCAGGACGTCGCCGCGGTGCTCTTCCCGGCCGCCGAGCGCGTCCTCGGCAGGGGCGCCGACGACCTCGTCCTCCTCGTCGAGTCCCTGCCCGCCAGGCTCGACGGCGCGATCGACGCCCTCGAGGCCCTCCTCGCCGGCGCCGCGGGGCTGTTCGTTCTCCCCAAGCGTTGCCGCCGCTACCGAGCCCACGAGGACGATGACGACGGCGTCGGCGGCGCCGTCTTTAGGGACATCTGGTGCGACGAGAAGGAAGCCGCGTCGTTGCACCGATCAGCAATGGAGGAAGAGGCGCGGAGGCATTCCGACGACGTGGCTCGGAAGGAACTCGAGAGCTTGGAGGTCGTCACGGCGGACGACGGCGGCGGCGGTGGCAACACCGTGCATGGCGACAAGGCTCCCGTCGACGGCGAAGGAGAGGCGGCGACTCCGGCGAAACGCGGCGACGCATCAGGTGGCCAAGAATGCGGCGTGGAGGATGTACAGCGGGTGGAGACGCCAGCTGCAGAGATCACAGATGCCATGAAGGACAGCACGGAGATCGTGAAGGATGAGGACCAGGAGAGAGGAGGCAGCGAGAGGGAAGAAGAGGAGACCTTCGCCATGGCCCGCACGGCGGAGAGCAGGGAGGAAGCATTGCTGGGTCTCTTCGATATAGCATGGCAGCAGAAGCTAGCGTAGGGTAACCAAAGGGCAAAGGTGTAACCATTGGACACTGTATAGTATAGTGTTGTGAAGTTGTAGACTTGTAGTAATCCTTGCACTGCTAGTGTCATATTGTGAACTGTCGCATACCGGATTGTAGAGAATAAAACCTGGGTACATCACAACGCATGAGCTGTTCACTGCTTCAAAAATGTAAATATCAGCAGATAGAAGCATGCAAACATTTCAAACCTCCTGAGAATGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL AU162175             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ttttTACATCACAACGCATGAGCTGTTCACNGCTTCAAAAATGTAAATATCAGCAGATAGAAGCATGCAAACATTTCAAACCTCCTGAGAATGCTTTTTATTCGAAATTTGACTTCAGGATTTTGGGGGCAAGCAAAGGCTACCAGACTAATCCCGGGCAAATACNCTGCATGGTATTGCAATGTGCAGCTACGCACACATCTAGATTGATTATTTGGGTGTAGCATCGAGGGACTAGGAAACCATTAGTTCATGACTTCAGGTCATATGATCAATGTTGGATTTTACNAGTTCACTGGTTTTCACAACAACAAGAAGTCTGGTGCCGCTTTGAAGGTCCATGCATTTGGATTTTGCAGTGCGCCACAAATGGAAAACAGGCATGCTCACTCAATAAACACCTGGATCCTATCTCCCATAGCATCCTCAAAATCAAGCAGTATCTGACCGTTCTGGGGGTTTTCTGAATCAATAGGTGCATTTCGAAGCCTTTCCATGATATTAGCTCCAGCCAAACCTGGAATAACTTTTGTCATNCCTTCTAAGAATCCAGCAGGTATTCTAGCATCGATTTTCTGAACNCCATCTCTTCCTGNAATCCTTAACCGAAGTGTCCGAGACCACATNCCTGCTGAAAGGGCTCTGCCTCCAGTAGAACCAAGATCATATAGCTGAGGCAATATGTCAATAACAGGTC]


>consensus_9274#0 CCACGGCGAGGTCACCGCCACGGTCTCTCGCCTCCCTCAGCTCCGTCGTCGACGTCGTCG TCTGTGAGATGGAAAATCAGGCCGTGTCGGAGATGCATGTCGTTATGGATTTGGAAGGCA CGACCAAGAGGATACCGCCGATGCAGACGCCGAGGGCGCGGCTGCTGCGCAGCTGCGGCG AGTCCATCCTGGCCATGGCGCGCGGGGCGTACCGGCGCGTGGAGGCGATGCGGTGCCCGG TGGGGTGCGTGGCCAGGGGCGCCTCCCGCGCGGCGGCCCCGGTGCTGAGCCCGCTACGGC TGAGGTGCCTCTCGGCGCTCGCCTTCGCGGACAGGCAGCTCCTCGTCGTCCAGGACGTCG CCGCGGTGCTCTTCCCGGCCGCCGAGCGCGTCCTCGGCAGGGGCGCCGACGACCTCGTCC TCCTCGTCGAGTCCCTGCCCGCCAGGCTCGACGGCGCGATCGACGCCCTCGAGGCCCTCC TCGCCGGCGCCGCGGGGCTGTTCGTTCTCCCCAAGCGTTGCCGCCGCTACCGAGCCCACG AGGACGATGACGACGGCGTCGGCGGCGCCGTCTTTAGGGACATCTGGTGCGACGAGAAGG AAGCCGCGTCGTTGCACCGATCAGCAATGGAGGAAGAGGCGCGGAGGCATTCCGACGACG TGGCTCGGAAGGAACTCGAGAGCTTGGAGGTCGTCACGGCGGACGACGGCGGCGGCGGTG GCAACACCGTGCATGGCGACAAGGCTCCCGTCGACGGCGAAGGAGAGGCGGCGACTCCGG CGAAACGCGGCGACGCATCAGGTGGCCAAGAATGCGGCGTGGAGGATGTACAGCGGGTGG AGACGCCAGCTGCAGAGATCACAGATGCCATGAAGGACAGCACGGAGATCGTGAAGGATG AGGACCAGGAGAGAGGAGGCAGCGAGAGGGAAGAAGAGGAGACCTTCGCCATGGCCCGCA CGGCGGAGAGCAGGGAGGAAGCATTGCTGGGTCTCTTCGATATAGCATGGCAGCAGAAGC TAGCGTAGGGTAACCAAAGGGCAAAGGTGTAACCATTGGACACTGTATAGTATAGTGTTG TGAAGTTGTAGACTTGTAGTAATCCTTGCACTGCTAGTGTCATATTGTGAACTGTCGCAT ACCGGATTGTAGAGAATAAAACCTGGGTACATCACAACGCATGAGCTGTTCACTGCTTCA AAAATGTAAATATCAGCAGATAGAAGCATGCAAACATTTCAAACCTCCTGAGAATGCTTT TTATTCGAAATTTGACTTCAGGATTTTGGGGGCAAGCAAAGGCTACCAGACTAATCCCGG GCAAATACNCTGCATGGTATTGCAATGTGCAGCTACGCACACATCTAGATTGATTATTTG GGTGTAGCATCGAGGGACTAGGAAACCATTAGTTCATGACTTCAGGTCATATGATCAATG TTGGATTTTACNAGTTCACTGGTTTTCACAACAACAAGAAGTCTGGTGCCGCTTTGAAGG TCCATGCATTTGGATTTTGCAGTGCGCCACAAATGGAAAACAGGCATGCTCACTCAATAA ACACCTGGATCCTATCTCCCATAGCATCCTCAAAATCAAGCAGTATCTGACCGTTCTGGG GGTTTTCTGAATCAATAGGTGCATTTCGAAGCCTTTCCATGATATTAGCTCCAGCCAAAC CTGGAATAACTTTTGTCATNCCTTCTAAGAATCCAGCAGGTATTCTAGCATCGATTTTCT GAACNCCATCTCTTCCTGNAATCCTTAACCGAAGTGTCCGAGACCACATNCCTGCTGAAA GGGCTCTGCCTCCAGTAGAACCAAGATCATATAGCTGAGGCAATATGTCAATAACAGGTC



consensusID : consensus_9274#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 669
fasta sequence
                              [AGGTATCTCCAAAAGCATGCGGACATACACAGGGAAGGAAAGTTGTCTCAAGGGAGGAAGCAATTATGCATATAAAAGCTGCTGTAGATGCCAGGAAGGAGAGTGGCTCTGACATTGTTATTGTGGCAAGGACAGACTCTCGTCAAGCTTTGTCTCTTGATGAAGCATTATGGAGAGTACGCGCTTTTGCAGATGCTGGAGCAGATGTTCTATTTATTGATGCCCTTGCTTCAAGAGAAGAGATGAAGGCATTTTGTGCAGTATCACCTGGAGTTCCAAAAATGGCTAACATGTTAGAAGGTGGTGGTAAAACTCCTATTTTGAGCCCTGCTGAACTTGAAGAAACTGGTTATAAACTCATAGCATACCCATTATCTCTGATTGGGGTATCAATGCGTGCAATGGAGGATGCTCTTATTGCTATAAAAGGTGGTCGCATACCTCCTCCCAGCAGTCTGCCATCATTTGAGGAGATTAAAGATACTCTGGGGTTTAACAGCTACTATGAAGAAGAAAAACGATACGTTGTGACACCAGCCCAATCATCATCGTACAGGAGCGGTTACTATGATAATACAAGTGAAGCAAGCAGTCCAGGAGATGCCAAATCAAGAACTGAAACACCGCAAGAGCCTGTTATTGACATATTGCCTCAGCTATATGATCTTG]

[+] EMBL CB000533             [AGGTATCTCCAAAAGCATGCGGACATACACAGGGAAGGAAAGTTGTCTCAAGGGAGGAAGCAATTATGCATATAAAAGCTGCTGTAGATGCCAGGAAGGAGAGTGGCTCTGACATTGTTATTGTGGCAAGGACAGACTCTCGTCAAGCTTTGTCTCTTGATGAAGCATTATGGAGAGTACGCGCTTTTGCAGATGCTGGAGCAGATGTTCTATTTATTGATGCCCTTGCTTCAAGAGAAGAGATGAAGGCATTTTGTGCAGTATCACCTGGAGTTCCAAAAATGGCTAACATGTTAGAAGGTGGTGGTAAAACTCCTATTTTGAGCCCTGCTGAACTTGAAGAAACTGGTTATAAACTCATAGCATACCCATTATCTCTGATTGGGGTATCAATGCGTGCAATGGAGGATGCTCTTATTGCTATAAAAGGTGGTCGCATACCTCCTCCCAGCAGTCTGCCATCATTTGAGGAGATTAAAGATACTCTGGGGTTTAACAGCTACTATGAAGAAGAAAAACGATACGTTGTGACACCAGCCCAATCATCATCGTACAGGAGCGGTTACTATGATAATACAAGTGAAGCAAGCAGTCCAGGAGATGCCAAATCAAGAACTGAAACACCGCAAGAGCCTGTTATTGACATATTGCCTCAGCTATATGATCTTG]


>consensus_9274#1 AGGTATCTCCAAAAGCATGCGGACATACACAGGGAAGGAAAGTTGTCTCAAGGGAGGAAG CAATTATGCATATAAAAGCTGCTGTAGATGCCAGGAAGGAGAGTGGCTCTGACATTGTTA TTGTGGCAAGGACAGACTCTCGTCAAGCTTTGTCTCTTGATGAAGCATTATGGAGAGTAC GCGCTTTTGCAGATGCTGGAGCAGATGTTCTATTTATTGATGCCCTTGCTTCAAGAGAAG AGATGAAGGCATTTTGTGCAGTATCACCTGGAGTTCCAAAAATGGCTAACATGTTAGAAG GTGGTGGTAAAACTCCTATTTTGAGCCCTGCTGAACTTGAAGAAACTGGTTATAAACTCA TAGCATACCCATTATCTCTGATTGGGGTATCAATGCGTGCAATGGAGGATGCTCTTATTG CTATAAAAGGTGGTCGCATACCTCCTCCCAGCAGTCTGCCATCATTTGAGGAGATTAAAG ATACTCTGGGGTTTAACAGCTACTATGAAGAAGAAAAACGATACGTTGTGACACCAGCCC AATCATCATCGTACAGGAGCGGTTACTATGATAATACAAGTGAAGCAAGCAGTCCAGGAG ATGCCAAATCAAGAACTGAAACACCGCAAGAGCCTGTTATTGACATATTGCCTCAGCTAT ATGATCTTG



consensusID : consensus_9274#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 583
fasta sequence
                              [TTTTTTTTTTCTCAAACCTCCTGAGAATGCTTTTTATTCGAAATTTGACTTCAGGATTTTGGGGGCAAGCAAAGGCTACCAGACTAATCCCGGGCAAATACTCTGCATGGTATTGCAATGTGCAGCTACGCACACATCTAGATTGATTATTTGGGTGTAGCATCGAGGGACTAGGAAACCATTAGTTCATGACTTCAGGTCATATGATCAATGTTGGATTTTACTAGTTCACTGGTTTTCACAACAAGAAGAAGTCTGGTGCCGCTTTGAAGGTCCATGCATTTGGATTTTGCAGTGCGCCAGCAAAGTGGAAAACAGGCATGCTCACTCAATAAACACCTGGATCCTATCTCCCATAGCATCCTCAAAATCAAGCAGTATCTGACCGTTCTGGGGGTTTCTGAATCAATAGGTGCATTTCGAAGCCTTTCCATGATATTAGCTCCAGCCAAACTGGAAATAACTTTGTCATGCCTTCTAAAGAAATCCCAGCAGTGTAATTTCTAGCATCCGATTTTCTGAACTCCATCTCTACCGTGTAATCCTTTAACCGGAAAGTGTCCGAGACCAACATCCCTGTTGA]

[-] EMBL BI797253             [TTTTTTTTTTCTCAAACCTCCTGAGAATGCTTTTTATTCGAAATTTGACTTCAGGATTTTGGGGGCAAGCAAAGGCTACCAGACTAATCCCGGGCAAATACTCTGCATGGTATTGCAATGTGCAGCTACGCACACATCTAGATTGATTATTTGGGTGTAGCATCGAGGGACTAGGAAACCATTAGTTCATGACTTCAGGTCATATGATCAATGTTGGATTTTACTAGTTCACTGGTTTTCACAACAAGAAGAAGTCTGGTGCCGCTTTGAAGGTCCATGCATTTGGATTTTGCAGTGCGCCAGCAAAGTGGAAAACAGGCATGCTCACTCAATAAACACCTGGATCCTATCTCCCATAGCATCCTCAAAATCAAGCAGTATCTGACCGTTCTGGGGGTTTCTGAATCAATAGGTGCATTTCGAAGCCTTTCCATGATATTAGCTCCAGCCAAACTGGAAATAACTTTGTCATGCCTTCTAAAGAAATCCCAGCAGTGTAATTTCTAGCATCCGATTTTCTGAACTCCATCTCTACCGTGTAATCCTTTAACCGGAAAGTGTCCGAGACCAACATCCCTGTTGA]


>consensus_9274#2 TTTTTTTTTTCTCAAACCTCCTGAGAATGCTTTTTATTCGAAATTTGACTTCAGGATTTT GGGGGCAAGCAAAGGCTACCAGACTAATCCCGGGCAAATACTCTGCATGGTATTGCAATG TGCAGCTACGCACACATCTAGATTGATTATTTGGGTGTAGCATCGAGGGACTAGGAAACC ATTAGTTCATGACTTCAGGTCATATGATCAATGTTGGATTTTACTAGTTCACTGGTTTTC ACAACAAGAAGAAGTCTGGTGCCGCTTTGAAGGTCCATGCATTTGGATTTTGCAGTGCGC CAGCAAAGTGGAAAACAGGCATGCTCACTCAATAAACACCTGGATCCTATCTCCCATAGC ATCCTCAAAATCAAGCAGTATCTGACCGTTCTGGGGGTTTCTGAATCAATAGGTGCATTT CGAAGCCTTTCCATGATATTAGCTCCAGCCAAACTGGAAATAACTTTGTCATGCCTTCTA AAGAAATCCCAGCAGTGTAATTTCTAGCATCCGATTTTCTGAACTCCATCTCTACCGTGT AATCCTTTAACCGGAAAGTGTCCGAGACCAACATCCCTGTTGA



consensusID : consensus_9274#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 342
fasta sequence
                              [TATGANCAATGTTGGNTTNTAGTAGNTCGNGGGTTTTCNTAACAAGAAGAAGNNTGGTGCCGCTTTGAAGGTCCATGCATTTGGNTTTTGCAGNGNGGCAGCAAATGGAAAACAGGCATGTTTNACTCAATAAACANNTGGATCCTATCTGANAAAGCATCCTCAAAATCAAGCAGTATNTGACCGTTNTGGGGGTTTTCTGAATNGAATAGGTGCATTTCGAAGCCTTTCCATGATATTAGCTCCAGGCCAAACCTATAATAACTTTTGTCATGCCTTCTAAGAATCCAGCAGGTATTCTAGCATCGATTTTCGTGAACTCCATCTCTACCTGTAATCCAA]

[-] EMBL CA766429             [TATGANCAATGTTGGNTTNTAGTAGNTCGNGGGTTTTCNTAACAAGAAGAAGNNTGGTGCCGCTTTGAAGGTCCATGCATTTGGNTTTTGCAGNGNGGCAGCAAATGGAAAACAGGCATGTTTNACTCAATAAACANNTGGATCCTATCTGANAAAGCATCCTCAAAATCAAGCAGTATNTGACCGTTNTGGGGGTTTTCTGAATNGAATAGGTGCATTTCGAAGCCTTTCCATGATATTAGCTCCAGGCCAAACCTATAATAACTTTTGTCATGCCTTCTAAGAATCCAGCAGGTATTCTAGCATCGATTTTCGTGAACTCCATCTCTACCTGTAATCCAA]


>consensus_9274#3 TATGANCAATGTTGGNTTNTAGTAGNTCGNGGGTTTTCNTAACAAGAAGAAGNNTGGTGC CGCTTTGAAGGTCCATGCATTTGGNTTTTGCAGNGNGGCAGCAAATGGAAAACAGGCATG TTTNACTCAATAAACANNTGGATCCTATCTGANAAAGCATCCTCAAAATCAAGCAGTATN TGACCGTTNTGGGGGTTTTCTGAATNGAATAGGTGCATTTCGAAGCCTTTCCATGATATT AGCTCCAGGCCAAACCTATAATAACTTTTGTCATGCCTTCTAAGAATCCAGCAGGTATTC TAGCATCGATTTTCGTGAACTCCATCTCTACCTGTAATCCAA



consensusID : consensus_9274#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 224
fasta sequence
                              [TGCATTTGGATTTTGCAGTGCGCNAGCAAATGGAAAACAGGCATGCTCACTCAATAAACACCTGNNNCCTATCTCCCATACATCCTCAAAATCCTCAAAATGAAGCAGTATCTGACCGTTCTGGGGGTTTTCTGAATCAATAGGTGCATTTCGAAGCCTTTCCATGATATTAGCTCCAGCCAAACCTGGAATAACTTTTGTCATGCCTTCTAAGAATCCAGCAG]

[-] EMBL AA749710             [TGCATTTGGATTTTGCAGTGCGCNAGCAAATGGAAAACAGGCATGCTCACTCAATAAACACCTGNNNCCTATCTCCCATACATCCTCAAAATCCTCAAAATGAAGCAGTATCTGACCGTTCTGGGGGTTTTCTGAATCAATAGGTGCATTTCGAAGCCTTTCCATGATATTAGCTCCAGCCAAACCTGGAATAACTTTTGTCATGCCTTCTAAGAATCCAGCAG]


>consensus_9274#4 TGCATTTGGATTTTGCAGTGCGCNAGCAAATGGAAAACAGGCATGCTCACTCAATAAACA CCTGNNNCCTATCTCCCATACATCCTCAAAATCCTCAAAATGAAGCAGTATCTGACCGTT CTGGGGGTTTTCTGAATCAATAGGTGCATTTCGAAGCCTTTCCATGATATTAGCTCCAGC CAAACCTGGAATAACTTTTGTCATGCCTTCTAAGAATCCAGCAG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9274#0      CCACGGCGAGGTCACCGCCACGGTCTCTCGCCTCCCTCAGCTCCGTCGTCGACGTCGTCG 60
consensus_9274#2      ------------------------------------------------------------
consensus_9274#4      ------------------------------------------------------------
consensus_9274#3      ------------------------------------------------------------
consensus_9274#1      ------------------------------------------------------------
                                                                                  

consensus_9274#0      TCTGTGAGATGGAAAATCAGGCCGTGTCGGAGATGCATGTCGTTATGGATTTGGAAGGCA 120
consensus_9274#2      ------------------------------------------------------------
consensus_9274#4      ------------------------------------------------------------
consensus_9274#3      ------------------------------------------------------------
consensus_9274#1      ------------------------------------------------------------
                                                                                  

consensus_9274#0      CGACCAAGAGGATACCGCCGATGCAGACGCCGAGGGCGCGGCTGCTGCGCAGCTGCGGCG 180
consensus_9274#2      ------------------------------------------------------------
consensus_9274#4      ------------------------------------------------------------
consensus_9274#3      ------------------------------------------------------------
consensus_9274#1      ------------------------------------------------------------
                                                                                  

consensus_9274#0      AGTCCATCCTGGCCATGGCGCGCGGGGCGTACCGGCGCGTGGAGGCGATGCGGTGCCCGG 240
consensus_9274#2      ------------------------------------------------------------
consensus_9274#4      ------------------------------------------------------------
consensus_9274#3      ------------------------------------------------------------
consensus_9274#1      ------------------------------------------------------------
                                                                                  

consensus_9274#0      TGGGGTGCGTGGCCAGGGGCGCCTCCCGCGCGGCGGCCCCGGTGCTGAGCCCGCTACGGC 300
consensus_9274#2      ------------------------------------------------------------
consensus_9274#4      ------------------------------------------------------------
consensus_9274#3      ------------------------------------------------------------
consensus_9274#1      ------------------------------------------------------------
                                                                                  

consensus_9274#0      TGAGGTGCCTCTCGGCGCTCGCCTTCGCGGACAGGCAGCTCCTCGTCGTCCAGGACGTCG 360
consensus_9274#2      ------------------------------------------------------------
consensus_9274#4      ------------------------------------------------------------
consensus_9274#3      ------------------------------------------------------------
consensus_9274#1      ------------------------------------------------------------
                                                                                  

consensus_9274#0      CCGCGGTGCTCTTCCCGGCCGCCGAGCGCGTCCTCGGCAGGGGCGCCGACGACCTCGTCC 420
consensus_9274#2      ------------------------------------------------------------
consensus_9274#4      ------------------------------------------------------------
consensus_9274#3      ------------------------------------------------------------
consensus_9274#1      ------------------------------------------------------------
                                                                                  

consensus_9274#0      TCCTCGTCGAGTCCCTGCCCGCCAGGCTCGACGGCGCGATCGACGCCCTCGAGGCCCTCC 480
consensus_9274#2      ------------------------------------------------------------
consensus_9274#4      ------------------------------------------------------------
consensus_9274#3      ------------------------------------------------------------
consensus_9274#1      ------------------------------------------------------------
                                                                                  

consensus_9274#0      TCGCCGGCGCCGCGGGGCTGTTCGTTCTCCCCAAGCGTTGCCGCCGCTACCGAGCCCACG 540
consensus_9274#2      ------------------------------------------------------------
consensus_9274#4      ------------------------------------------------------------
consensus_9274#3      ------------------------------------------------------------
consensus_9274#1      ------------------------------------------------------------
                                                                                  

consensus_9274#0      AGGACGATGACGACGGCGTCGGCGGCGCCGTCTTTAGGGACATCTGGTGCGACGAGAAGG 600
consensus_9274#2      ------------------------------------------------------------
consensus_9274#4      ------------------------------------------------------------
consensus_9274#3      ------------------------------------------------------------
consensus_9274#1      ------------------------------------------------------------
                                                                                  

consensus_9274#0      AAGCCGCGTCGTTGCACCGATCAGCAATGGAGGAAGAGGCGCGGAGGCATTCCGACGACG 660
consensus_9274#2      ------------------------------------------------------------
consensus_9274#4      ------------------------------------------------------------
consensus_9274#3      ------------------------------------------------------------
consensus_9274#1      ------------------------------------------------------------
                                                                                  

consensus_9274#0      TGGCTCGGAAGGAACTCGAGAGCTTGGAGGTCGTCACGGCGGACGACGGCGGCGGCGGTG 720
consensus_9274#2      ------------------------------------------------------------
consensus_9274#4      ------------------------------------------------------------
consensus_9274#3      ------------------------------------------------------------
consensus_9274#1      ------------------------------------------------------------
                                                                                  

consensus_9274#0      GCAACACCGTGCATGGCGACAAGGCTCCCGTCGACGGCGAAGGAGAGGCGGCGACTCCGG 780
consensus_9274#2      ------------------------------------------------------------
consensus_9274#4      ------------------------------------------------------------
consensus_9274#3      ------------------------------------------------------------
consensus_9274#1      ------------------------------------------------------------
                                                                                  

consensus_9274#0      CGAAACGCGGCGACGCATCAGGTGGCCAAGAATGCGGCGTGGAGGATGTACAGCGGGTGG 840
consensus_9274#2      ------------------------------------------------------------
consensus_9274#4      ------------------------------------------------------------
consensus_9274#3      ------------------------------------------------------------
consensus_9274#1      ------------------------------------------------------------
                                                                                  

consensus_9274#0      AGACGCCAGCTGCAGAGATCACAGATGCCATGAAGGACAGCACGGAGATCGTGAAGGATG 900
consensus_9274#2      ------------------------------------------------------------
consensus_9274#4      ------------------------------------------------------------
consensus_9274#3      ------------------------------------------------------------
consensus_9274#1      ------------------------------------------------------------
                                                                                  

consensus_9274#0      AGGACCAGGAGAGAGGAGGCAGCGAGAGGGAAGAAGAGGAGACCTTCGCCATGGCCCGCA 960
consensus_9274#2      ------------------------------------------------------------
consensus_9274#4      ------------------------------------------------------------
consensus_9274#3      ------------------------------------------------------------
consensus_9274#1      ------------------------------------------------------------
                                                                                  

consensus_9274#0      CGGCGGAGAGCAGGGAGGAAGCATTGCTGGGTCTCTTCGATATAGCATGGCAGCAGAAGC 1020
consensus_9274#2      ------------------------------------------------------------
consensus_9274#4      ------------------------------------------------------------
consensus_9274#3      ------------------------------------------------------------
consensus_9274#1      ------------------------------------------------------------
                                                                                  

consensus_9274#0      TAGCGTAGGGTAACCAAAGGGCAAAGGTGTAACCATTGGACACTGTATAGTATAGTGTTG 1080
consensus_9274#2      ------------------------------------------------------------
consensus_9274#4      ------------------------------------------------------------
consensus_9274#3      ------------------------------------------------------------
consensus_9274#1      ------------------------------------------------------------
                                                                                  

consensus_9274#0      TGAAGTTGTAGACTTGTAGTAATCCTTGCACTGCTAGTGTCATATTGTGAACTGTCGCAT 1140
consensus_9274#2      ------------------------------------------------------------
consensus_9274#4      ------------------------------------------------------------
consensus_9274#3      ------------------------------------------------------------
consensus_9274#1      ------------------------------------------AGGTATCTCCAAAAGCAT 18
                                                                                  

consensus_9274#0      ACCGGATTGTAGAGAATAAAACCTGGGTACATCACAACGCATGAGCTGTTCACTGCTTCA 1200
consensus_9274#2      ------------------------------------------------------------
consensus_9274#4      ------------------------------------------------------------
consensus_9274#3      ------------------------------------------------------------
consensus_9274#1      GCGGACATACACAGGGAAGGAAAGTTGTCTCAAGGGAGGAAGCAATTATGCATATAAAAG 78
                                                                                  

consensus_9274#0      AAAATGTAAATATCAGCAGATAGAAGCATGCAAACATTTCAAACCTCCTGAGAATGCTTT 1260
consensus_9274#2      ---------------------------TTTTTTTTTTCTCAAACCTCCTGAGAATGCTTT 33
consensus_9274#4      ------------------------------------------------------------
consensus_9274#3      ------------------------------------------------------------
consensus_9274#1      CTGCTGTAGATGCCAGGAAGGAGAGTGGCTCTGACATTGTTATTGTGGCAAGGACAGACT 138
                                                                                  

consensus_9274#0      TTATTCGAAATTTGACTTCAGGATTTTGGGGGCAAGCAAAGGCTACCAGACTAATCCCGG 1320
consensus_9274#2      TTATTCGAAATTTGACTTCAGGATTTTGGGGGCAAGCAAAGGCTACCAGACTAATCCCGG 93
consensus_9274#4      ------------------------------------------------------------
consensus_9274#3      ------------------------------------------------------------
consensus_9274#1      CTCGTCAAGCTTTGTCTCTTGA----TGAAGCATTATGGAGAGTACGCG------CTTTT 188
                                                                                  

consensus_9274#0      GCAAATACNCTGCATGGTATTGCAATGTGCAGCTACGCACACATCTAGATTGATTATTTG 1380
consensus_9274#2      GCAAATACTCTGCATGGTATTGCAATGTGCAGCTACGCACACATCTAGATTGATTATTTG 153
consensus_9274#4      ------------------------------------------------------------
consensus_9274#3      ------------------------------------------------------------
consensus_9274#1      GCAGATGCTGGAGCAGATGTT-CTATTTATTGATGCCCTTGCTTCAAGAGAAGAGATGAA 247
                                                                                  

consensus_9274#0      GGTGTAGCATCGAGGGACTAGGAAACCATTAGTTCATGACTTCAGGTCATATGATCAATG 1440
consensus_9274#2      GGTGTAGCATCGAGGGACTAGGAAACCATTAGTTCATGACTTCAGGTCATATGATCAATG 213
consensus_9274#4      ------------------------------------------------------------
consensus_9274#3      -------------------------------------------------TATGANCAATG 11
consensus_9274#1      GGCATTTTGTGCAGTATCACCTGGAGTTCCAAAAATGGCTAACATGTTAGAAGGTGGTGG 307
                                                                                  

consensus_9274#0      TTGGATTTTACNAGTTCACTGGTTTTCACAACAACAAGAAGTCTGGTGCCGCTTTGAAGG 1500
consensus_9274#2      TTGGATTTTACTAGTTCACTGGTTTTCACAACAAGAAGAAGTCTGGTGCCGCTTTGAAGG 273
consensus_9274#4      ------------------------------------------------------------
consensus_9274#3      TTGGNTTNTAGTAGNTCGNGGGTTTTCNTAACAAGAAGAAGNNTGGTGCCGCTTTGAAGG 71
consensus_9274#1      TAAAACTCCTATTTTGAGCCCTGCTGAACTTGAAGAAACTGGTTATAAACTCATAGCATA 367
                                                                                  

consensus_9274#0      TCCATGCATTTGGATTTTGCAGTGCGCCAC--AAATGGAAAACAGGCATGCT-CACTCAA 1557
consensus_9274#2      TCCATGCATTTGGATTTTGCAGTGCGCCAGCAAAGTGGAAAACAGGCATGCT-CACTCAA 332
consensus_9274#4      ----TGCATTTGGATTTTGCAGTGCGCNAGC-AAATGGAAAACAGGCATGCT-CACTCAA 54
consensus_9274#3      TCCATGCATTTGGNTTTTGCAGNGNGGCAGC-AAATGGAAAACAGGCATGTTTNACTCAA 130
consensus_9274#1      CCCATTATCTCTGATTGGGGTATCAATGCGTGCAATGGAGGATGCTCTTATT-GCTATAA 426
                          *    *  * **  *              * ****  *    * *  *      **

consensus_9274#0      TAAACACCTGGATCCTATCTCCCATA--------GCATCCTCAAAATCAAGCAGTATCTG 1609
consensus_9274#2      TAAACACCTGGATCCTATCTCCCATA--------GCATCCTCAAAATCAAGCAGTATCTG 384
consensus_9274#4      TAAACACCTGNNNCCTATCTCCCATACATCCTCAAAATCCTCAAAATGAAGCAGTATCTG 114
consensus_9274#3      TAAACANNTGGATCCTATCTGANAAA--------GCATCCTCAAAATCAAGCAGTATNTG 182
consensus_9274#1      AAGGTGGTCGCATACCTCCTCCCAGC-------AGTCTGCCATCATTTGAGGAGATTAAA 479
                       *       *    *   **   *             * *    * *  ** **  *   

consensus_9274#0      ACCGTTCTGGGGGTTTTCTGA-ATC-AATAGGTGCATTTCGAAGCCTTTCCATGATATTA 1667
consensus_9274#2      ACCGTTCTGGGGGTTT-CTGA-ATC-AATAGGTGCATTTCGAAGCCTTTCCATGATATTA 441
consensus_9274#4      ACCGTTCTGGGGGTTTTCTGA-ATC-AATAGGTGCATTTCGAAGCCTTTCCATGATATTA 172
consensus_9274#3      ACCGTTNTGGGGGTTTTCTGA-ATNGAATAGGTGCATTTCGAAGCCTTTCCATGATATTA 241
consensus_9274#1      GATACTCTGGGGTTTAACAGCTACTATGAAGAAGAAAAACGATACGTT---GTGACACCA 536
                           * ***** **  * *  *      **  * *   ***  * **    *** *  *

consensus_9274#0      GCTCCAG-CCAAACCTGGAATAACTTTTGTCATNCCTTCTAAGAA---TCCAGCAG-GTA 1722
consensus_9274#2      GCTCCAG-CCAAACTGGAAATAACTTT-GTCATGCCTTCTAAAGAAATCCCAGCAGTGTA 499
consensus_9274#4      GCTCCAG-CCAAACCTGGAATAACTTTTGTCATGCCTTCTAAGAA---TCCAGCAG---- 224
consensus_9274#3      GCTCCAGGCCAAACCTATAATAACTTTTGTCATGCCTTCTAAGAA---TCCAGCAG-GTA 297
consensus_9274#1      GCCCAATCATCATCGTACAGGAGCGGTTACTATGATAATACAAGTGAAGCAAGCAGTCCA 596
                      ** * *     * *    *  * *  *    **        *       * *****    

consensus_9274#0      --TTCTAGCATC-GATTTTCTGAACNCCATCTCTTCC-TGNAATCCTT-AACCG--AAGT 1775
consensus_9274#2      ATTTCTAGCATCCGATTTTCTGAACTCCATCTCTACCGTGTAATCCTTTAACCGGAAAGT 559
consensus_9274#4      ------------------------------------------------------------
consensus_9274#3      --TTCTAGCATCGATTTTCGTGAACTCCATCTCTACC-TGTAATCCAA------------ 342
consensus_9274#1      GGAGATGCCAAATCAAGAACTGAAACACCGCAAGAGCCTGTTATTGACATATTGCCTCAG 656
                                                                                  

consensus_9274#0      GTCCGAGACCA-CATNCCTGCTGAAAGGGCTCTGCCTCCAGTAGAACCAAGATCATATAG 1834
consensus_9274#2      GTCCGAGACCAACATCCCTGTTGA------------------------------------ 583
consensus_9274#4      ------------------------------------------------------------
consensus_9274#3      ------------------------------------------------------------
consensus_9274#1      CTATATGATCTTG----------------------------------------------- 669
                                                                                  

consensus_9274#0      CTGAGGCAATATGTCAATAACAGGTC 1860
consensus_9274#2      --------------------------
consensus_9274#4      --------------------------
consensus_9274#3      --------------------------
consensus_9274#1      --------------------------
                                                




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)