cluster # 9284

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Oryza sativa
cluster # 9284 cluster # 9284 Sequences # 6 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9284#0 length = 1671 sequences # 6
consensusID : consensus_9284#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1671
fasta sequence
                              [AAAGTTGTATTCGAATGGANGACCAATGATGCATATGCAGGAGTTAATGCATAAATGATGGAAATGGTAATGATTCTGAAACTAAAGTTATTATGGATGAGGCACNGATTTTAACACGAAGATGAGCACATGCTCAAAAGAACTGAGTGCTTCATTTTTAGAGTCATCTGCTAGCATGCAGCACTTGTCTCAGATTGACAAGTCTATTGCTGCTCAGACATCTGATAAGAGCACCCCTCTTGAAAACCTTGGAGAGGATTGCAGAGAAAGAGAATTTCCAGAAGAAAATAGTACAGCACTGGAACAAGGGCAAGCTATTGGAAGTAAAATGGAAGGAGATGACAAAGATAAACAGTCAAAATTAAATGTAAAGGATCAGAAATATTTTCATTTGGACAGCTACATTGTACCTAAATTTACCAGAGAACACTACATTGAATTTTGTCCAGAAATTGATAGATGAGACCCCTGATGGTCAGAGAATTGAAGGGAGGGAAAATGTGAAAAAGACACTGAGAGAAACTGAGAAGGAGGTCTTGCATAGACTAGATGAAGAC-AAGAAATATACAAAATGGAAAGAGAAAAGGAACAAGCTAAAGAGAGGTCAAGAAGAGAATTAGAAGAAGAGAAGGAACGGGAGAGAGAGCGAGCAAAAGATAGACTTGCTGTTCAGAGAGCTACGAAAGAAGCACATGAGAGAGCATTTGCTGAGGCCCGTGCAAAGGCTGAAAGAATAGCATTGGAAAGGATTACCTTAGCACGTCAACGAGCATCTGCAGAAGCTCGAGAGAAAGAGGAGAAGGCAACTGCGGAAGCAGCTACTGAGAAGGCTTCTAGAGAAGCTAGACTAAAGGCAGAACGTGCAGCAGTTGAGAGAGCAACTGCTGAAGCTCGGGAGAGAGCAATTGAAAAGGCAAAAGCTGCTGCAGATGCAAAGGAGCGAATGGAAAGATTTAGATCCTCCTTCAAGGACAGTTTCAAGTCTACTAATCAGGATAATCAACTGGACAAACAGTTTCAGAAGACAGCTTCTAATAACTATGAAAGAAGCACGGATTCTAGTAATCAAGT--AGTTTGAGTCAGCTCTGAGACATAAAGCAAGATCTGAGAGGGAACATCGCACAGCTGAGCGAGCGGCCAAAGCTCTAGCTGAAAAGAATATGCGGGACATGCTGGCTCAGAGAGAGCAAGCAGAGAGACATAGATTAGCTGAATACCTTGACCCCGAAGTCAAGAGATGGTCAAATGGAAAGGAAGGAAATCTGCGAGCATTGCTATCTACATTGCAATATATCCTTGGTTCAGATAGTGGTTGGCAATCGGTTCCCCTCACAGATCTCATTACAGCAACTGCTGTCAAGAAAGCATATAGAAGGGCAACCCTTTGTGTCCATCCCGATAAACTACAACAAAGGGGTGCTACAATCAGACAGAAATATATTTGTGAGAAGGTGTTTGATCTTCTTAAGGAGGCATGGAACAAATTCAATTCCGAAGAGCGATAGCTCGGGATGTAGGGGACAATAAATTGGATTTTTGATTTTCTAGTTTTACTAAAATTATATTTTNTNAAACAAATTTCAAAGGCCTAATGATAAAAANGCTCGATAACAAAACTGTCGAATAGCGTTGTGGAGAGCGGTTTTGATATGTGATCTGANCAAAATNACA]

[+] EMBL BI806830             [AAAGTTGTATTCGAATGGANGACCAATGATGCATATGCAGGAGTTAATGCATAAATGATGGAAATGGTAATGATTCTGAAACTAAAGTTATTATGGATGAGGCACNGATTTTAACACGAAGATGAGCACATGCTCAAAAGAACTGAGTGCTTCATTTTTAGAGTCATCTGCTAGCATGCAGCACTTGTCTCAGATTGACAAGTCTATTGCTGCTCAGACATCTGATAAGAGCACCCCTCTTGAAAACCTTGGAGAGGATTGCAGAGAAAGAGAATTTCCAGAAGAAAATAGTACAGCACTGGAACAAGGGCAAGCTATTGGAAGTAAAATGGAAGGAGATGACAAAGATAAACAGTCAAAATTAAATGTAAAGGATCAGAAATATTTTCATTTGGACAGCTACATTGTACCTAAATTTACCAGAGAACACTACATTGAATTTTGTCCAGAAATTGATAGATGAGACCCCTGATGGTCAGAGAATTGAAGGGAGGGAAAATGTGAAAAAGACACTGAGAGAAACTGAGAAGGAGGTCTTGCATAGACTAGATGAAGAC AAGAAATATACAAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CB626434             [                                                                                                                                                                                                                                                                                       AGAAGACCTTA AACAGCACTGGAACAAGGGCAAGCTATTGGAAGTAAAATGGAAGGAGATGACAAAGATAAACAGTCAAAATTAAATGTAAAGGATCAGAAATATTTTCATTTGGACAGCTACATTGTACCTAAATTTA CAGAGAACACTACATTGAATTTTGTCCAGAAATTGATAGATGAGACCCCTGATGGTCAGAGAATTGAAGGGAGAGAAAATGTGAAAAAGACACTGAGAGAAACTGAGAAGGAGGTCTTGCATAGACTAGATGAAGACAAAGAAATATACAAAATGGAAAGAGAAAAGGAACAAGCTAAAGAGAGGTCAAGAAGAGAATTAGAAGAAGAGAAGGAACGGGAGAGAGAGCGAGCAAAAGATAGACTTGCTGTTCAGAGAGCTACGAAAGAAGCACATGAGAGAGCATTTGCTGAGGCCCGTGCAAAGGCTGAAAGAATAGCATTGGAAAGGATTACCTTAGCACGTCAACGAGCATCTGCAGAAGCTCGAGAGAAAGAGGAGAAGGCAACTGCGGAAGCAGCTACTGAGAAGGCTTCTAGAGAAGCTAGACTAAAGGCAGAACGTGCAGCAGTTGAGAGAGCAACTGCTGAAGCTCGGGAGAGAGCAATTGAAAAGGCAAAAGCTGCTGCAGATGCAAAGGAGCGAATGGAAAGATTTAGATCCTCCTTCAAGGACAGTTTCAAGTCTACTAATCAGGATAATCAACTGGACAAACAGTTTCAGAAGACAGCTTCTAATAACTATGAAAGAAGCACGGATTCTAGTAATCAAGT  AGTTg                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CF276428             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TAGATCCTCCTTCAAGGACAGTTTCAAGTCTACTAATCAGGATAATCAACTGGACAAACAGTTTCAGAAGACAGCTTCTAATAACTATGAAAGAAGCACGGATTCTAGTAATCAAGTTGAGTTTGAGTCAGCTCTGAGACATAAAGCAAGATCTGAGAGGGAACATCGCACAGCTGAGCGAGCGGCCAAAGCTCTAGCTGAAAAGAATATGCGGGACATGCTGGCTCAGAGAGAGCAAGCAGAGAGACATAGATTAGCTGAATACCTTGACCCCGAAGTCAAGAGATGGTCAAATGGAAAGGAAGGAAATCTGCGAGCATTGCTATCTACATTGCAATATATCCTTGGTTCAGATAATGGTTGGCAATCGGTTCCCCTCACAGATCTCATTACAGCAACTGCTGTCAAGAAAGCATATAG                                                                                                                                                                                                                                                                                                           ]
[-] EMBL CB622083             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            gttg  AGTTTGAGTCAGCTCTGAGACATAAAGCAAGATCTGAGAGGGAACATCGCACAGCTGAGCGAGCGGCCAAAGCTCTAGCTGAAAAGAATATGCGGGACATGCTGGCTCAGAGAGAGCAAGCAGAGAGACATAGATTAGCTGAATACCTTGACCCCGAAGTCAAGAGATGGTCAAATGGAAAGGAAGGAAATCTGCGAGCATTGCTATCTACATTGCAATATATCCTTGGTTCAGATAGTGGTTGGCAATCGGTTCCCCTCACAGATCTCATTACAGCAACTGCTGTCAAGAAAGCATATAGAAGGGCAACCCTTTGTGTCCATCCCGATAAACTACAACAAAGGGGTGCTACAATCAGACAGAAATATATTTGTGAGAAGGTGTTTGATCTTCTTAAGGAGGCATGGAACAAATTCAATTCCGAAGAGCGATAGCTCGGGATGTAGGGGACAATAAATTGGATTTTTGATTTTCTAGTTTTACTA                                                                                                                   ]
[-] EMBL CB626435             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                TCGCACAGCTGAGCGAGCGGCCAAAGCTCTAGCTGAAAAGAATATGCGGGACATGCTGGCTCAGAGAGAGCAAGCAGAGAGACATAGATTAGCTGAATACCTTGACCCCGAAGTCAAGAGATGGTCAAATGGAAAGGAAGGAAATCTGCGAGCATTGCTATCTACATTGCAATATATCCTTGGTTCAGATAGTGGTTGGCAATCGGTTCCCCTCACAGATCTCATTACAGCAACTGCTGTCAAGAAAGCATATAGAAGGGCAACCCTTTGTGTCCATCCCGATAAACTACAACAAAGGGGTGCTACAATCAGACAGAAATATATTTGTGAGAAGGTGTTTGATCTTCTTAAGGAGGCATGGAACAAATTCAATTCCGAAGAGCGATAGCTCGGGATGTAGGGGACAATAAATTGGATTTTTGATTTTCTAGTTTTACTA                                                                                                                   ]
[+] EMBL AA750887             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        GAGAAGGTGTTTGATCTTCTTAAGGAGGCATGGAACAAATTCAATTCCGAAGAGCGATACGT  GGATGTAGGGGACAATAAATTGGATTTTTGATTTTCTAGTTTTACTAAAATTATATTTTNTNAAACAAATTTCAAAGGCCTAATGATAAAAANGCTCGATAACAAAACTGTCGAATAGCGTTGTGGAGAGCGGTTTTGATATGTGATCTGANCAAAATNACA]




>consensus_9284#0
AAAGTTGTATTCGAATGGANGACCAATGATGCATATGCAGGAGTTAATGCATAAATGATG
GAAATGGTAATGATTCTGAAACTAAAGTTATTATGGATGAGGCACNGATTTTAACACGAA
GATGAGCACATGCTCAAAAGAACTGAGTGCTTCATTTTTAGAGTCATCTGCTAGCATGCA
GCACTTGTCTCAGATTGACAAGTCTATTGCTGCTCAGACATCTGATAAGAGCACCCCTCT
TGAAAACCTTGGAGAGGATTGCAGAGAAAGAGAATTTCCAGAAGAAAATAGTACAGCACT
GGAACAAGGGCAAGCTATTGGAAGTAAAATGGAAGGAGATGACAAAGATAAACAGTCAAA
ATTAAATGTAAAGGATCAGAAATATTTTCATTTGGACAGCTACATTGTACCTAAATTTAC
CAGAGAACACTACATTGAATTTTGTCCAGAAATTGATAGATGAGACCCCTGATGGTCAGA
GAATTGAAGGGAGGGAAAATGTGAAAAAGACACTGAGAGAAACTGAGAAGGAGGTCTTGC
ATAGACTAGATGAAGACAAGAAATATACAAAATGGAAAGAGAAAAGGAACAAGCTAAAGA
GAGGTCAAGAAGAGAATTAGAAGAAGAGAAGGAACGGGAGAGAGAGCGAGCAAAAGATAG
ACTTGCTGTTCAGAGAGCTACGAAAGAAGCACATGAGAGAGCATTTGCTGAGGCCCGTGC
AAAGGCTGAAAGAATAGCATTGGAAAGGATTACCTTAGCACGTCAACGAGCATCTGCAGA
AGCTCGAGAGAAAGAGGAGAAGGCAACTGCGGAAGCAGCTACTGAGAAGGCTTCTAGAGA
AGCTAGACTAAAGGCAGAACGTGCAGCAGTTGAGAGAGCAACTGCTGAAGCTCGGGAGAG
AGCAATTGAAAAGGCAAAAGCTGCTGCAGATGCAAAGGAGCGAATGGAAAGATTTAGATC
CTCCTTCAAGGACAGTTTCAAGTCTACTAATCAGGATAATCAACTGGACAAACAGTTTCA
GAAGACAGCTTCTAATAACTATGAAAGAAGCACGGATTCTAGTAATCAAGTAGTTTGAGT
CAGCTCTGAGACATAAAGCAAGATCTGAGAGGGAACATCGCACAGCTGAGCGAGCGGCCA
AAGCTCTAGCTGAAAAGAATATGCGGGACATGCTGGCTCAGAGAGAGCAAGCAGAGAGAC
ATAGATTAGCTGAATACCTTGACCCCGAAGTCAAGAGATGGTCAAATGGAAAGGAAGGAA
ATCTGCGAGCATTGCTATCTACATTGCAATATATCCTTGGTTCAGATAGTGGTTGGCAAT
CGGTTCCCCTCACAGATCTCATTACAGCAACTGCTGTCAAGAAAGCATATAGAAGGGCAA
CCCTTTGTGTCCATCCCGATAAACTACAACAAAGGGGTGCTACAATCAGACAGAAATATA
TTTGTGAGAAGGTGTTTGATCTTCTTAAGGAGGCATGGAACAAATTCAATTCCGAAGAGC
GATAGCTCGGGATGTAGGGGACAATAAATTGGATTTTTGATTTTCTAGTTTTACTAAAAT
TATATTTTNTNAAACAAATTTCAAAGGCCTAATGATAAAAANGCTCGATAACAAAACTGT
CGAATAGCGTTGTGGAGAGCGGTTTTGATATGTGATCTGANCAAAATNACA
clustalw multiple alignements is not computed in this case