cluster # 9309

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Oryza sativa
cluster # 9309 cluster # 9309 Sequences # 6 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9309#0 length = 2164 sequences # 5

consensus_9309#1 length = 439 sequences # 1

consensusID : consensus_9309#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 2164
fasta sequence

                              [TCTTCAGTCTCTTCCTCCTAATCTTGATACTAGTTGATGGGTGGTTGACGTTTCATCGAGCTATCCTAGCTCAAGGCTTCTCTATCCCTTTCTACTCTCCCACTCCTCTCTAACCACTGTACTATATACTAGCACTGAAGCTGGACACTGATACAAAATTCCGTACTAATATTGACAACTGACTACCTATACTGGTGTGGCACCATTATATACCTCTTCTCCCGCCTGCCATTACTAACCACCAGCCGGAGCTACATTGCTTCGAGATGATGGGAATTCAGAGAATTTGCATCGTTCTTGGGATGCTTTTTATACTTGTGAGAGAGGGTGGAGCTGTGACATTCACGTTCGTGAACCGGTGCACGGGGACGGTGTGGCCGGGCATCCTGTCGAACGCCGGGAGCGCGAGGATGGACCCGACGGGGTTCGAGCTGCCGCCCGGCGCGGCGCGCGCGG-TGCCGGCGCCGACCGGCTGGTCCGGCCGCCTGTGGGCGCGCACGGGCTGCACGCAGGACGGCACCGGGAAGGTCGTGTGCGCGACGGGCGACTGCGGCTCGGGCACGCTGGAGTGCGCCGGCCGCGGCGCGGCGCCCCCGGCCACGCTGGCGGAGTTCACGCTCGACGGCGGCGGCCGCAACGACTTCTACGACGTCAGCCTCGTGGACGGGTACAACCTGCCGTTGCTGGTGGAGCCCTCGGGCGCCCTCGGCGCGACGGCGACGACGTGCGCGGCCGCCGGGTGCGCGGCCGACCTGAACGCGCGGTGCCCGGCCGAGCTCCGCGCCGTGGGCGGCGCGGCGTGCCGGAGCGCGTGCGACGCGTTCGGCAAGCCCGAGTTCTGCTGCAGCGGCGCGTACGCCAACCCGAACACCTGCCGCCCCACCGCCTACTCCCAGGTCTTCAAGTCGGCGTGCCCGCGCTCCTACAGCTACGCCTACGACGACCCGACGAGCACCTTCACCTGCGCCGGCGGCCGCGACTACACCATCACCTTCTGCCCCGTCGCCACCCCAAGCCTGAAATCTGCGGGAGGAACGACGACACCGACGACGACGGTGCCGGGCGTGACCACGGACGCCCCACCGGACATGGCAAGGCCGATAGGCA-GCCAAGGCGGCGGCGGCGGCGGGGGCGCCGGCCAAGGCGTGATGCTGGGCGACAACTCCTGGCTCGCCAGCCTCGCCATGGGCGACGCGTCGTCCTCGCGGAGAGCCTCGCGGCTGGCCCTCCTGGCCGCGCCCCTCGCGCTGCTCACGCTCCACCTGCCGCGGCTATAGCGGCTGATCACGTACGCGAAAACCACCCGAAATTTTTTTGGTCAAAAGGGCAGGGGGATGCGGGGGACGTCGCACGATTGCACGGGCCACCACCAGTCCACCAACACATCATTACCACCAAGAGCGCGCGAACGCCGAAACGGTGTGCGCTTCGGTCGCTTCTGCTGCTGCCGCCGCGGCGCCGGCGGCAGCGGGTGGCCGTGCGCTCGAGTGGTGTGTTTGCCGGTGTCGTGCACGGTGTGGGGCCAGCGAG-CTCGGTGTGTGGGGGCGATCGGGTGATTCGGTTTGGCCAAGATCGGCGTAGCGCCATTGTAAAATCCATCAGATTTTTTTTTTTTGGGTTCTTCTTTCTTTTGGTTTGCGCATTTGTGTCTCGCAGAAAAGAAATGTACAAGATTAATCCCACAGATTAAGAAGCAAAATGATTATGAACGCACTCGGCCGTCCTGTTTCCCGGGCTCTAATCGTAGTGGCGAACCAACTAACATGATCACGGTTGGTTGACATCGTTGTTAACGCACTGGACAGATACCTGCCACGTTATTACAGCTCTAACCCACTTGTACTATCAATATGGCTGCATACCCCTACAGTTTTCGTAGACGTGGCCGTCCCATTATTGCTGCCACTCTACTACAGAAGACTCGACCTATGGCTACACTACAAGTACTAGGACACGTATGCTCAATGTTTTCTTTTTCTTCTCATTTTTTGCCGCTGATGATTGATTGCTAGCAAGGTAGCTTCATGCATAGTGATTCCATACCCCAATCAAAGTACCAAACCTCTGAAAGGAACTAATGGCATGATAATGGCCTAGGTGTCTGCACGGGCTAAAATACTATACTACTCCAAATGTATACTAAAGTCTACAACATATAGCGTAC]

[+] EMBL AK100431             [TCTTCAGTCTCTTCCTCCTAATCTTGATACTAGTTGATGGGTGGTTGACGTTTCATCGAGCTATCCTAGCTCAAGGCTTCTCTATCCCTTTCTACTCTCCCACTCCTCTCTAACCACTGTACTATATACTAGCACTGAAGCTGGACACTGATACAAAATTCCGTACTAATATTGACAACTGACTACCTATACTGGTGTGGCACCATTATATACCTCTTCTCCCGCCTGCCATTACTAACCACCAGCCGGAGCTACATTGCTTCGAGATGATGGGAATTCAGAGAATTTGCATCGTTCTTGGGATGCTTTTTATACTTGTGAGAGAGGGTGGAGCTGTGACATTCACGTTCGTGAACCGGTGCACGGGGACGGTGTGGCCGGGCATCCTGTCGAACGCCGGGAGCGCGAGGATGGACCCGACGGGGTTCGAGCTGCCGCCCGGCGCGGCGCGCGCGG TGCCGGCGCCGACCGGCTGGTCCGGCCGCCTGTGGGCGCGCACGGGCTGCACGCAGGACGGCACCGGGAAGGTCGTGTGCGCGACGGGCGACTGCGGCTCGGGCACGCTGGAGTGCGCCGGCCGCGGCGCGGCGCCCCCGGCCACGCTGGCGGAGTTCACGCTCGACGGCGGCGGCCGCAACGACTTCTACGACGTCAGCCTCGTGGACGGGTACAACCTGCCGTTGCTGGTGGAGCCCTCGGGCGCCCTCGGCGCGACGGCGACGACGTGCGCGGCCGCCGGGTGCGCGGCCGACCTGAACGCGCGGTGCCCGGCCGAGCTCCGCGCCGTGGGCGGCGCGGCGTGCCGGAGCGCGTGCGACGCGTTCGGCAAGCCCGAGTTCTGCTGCAGCGGCGCGTACGCCAACCCGAACACCTGCCGCCCCACCGCCTACTCCCAGGTCTTCAAGTCGGCGTGCCCGCGCTCCTACAGCTACGCCTACGACGACCCGACGAGCACCTTCACCTGCGCCGGCGGCCGCGACTACACCATCACCTTCTGCCCCGTCGCCACCCCAAGCCTGAAATCTGCGGGAGGAACGACGACACCGACGACGACGGTGCCGGGCGTGACCACGGACGCCCCACCGGACATGGCAAGGCCGATAGGCA GCCAAGGCGGCGGCGGCGGCGGGGGCGCCGGCCAAGGCGTGATGCTGGGCGACAACTCCTGGCTCGCCAGCCTCGCCATGGGCGACGCGTCGTCCTCGCGGAGAGCCTCGCGGCTGGCCCTCCTGGCCGCGCCCCTCGCGCTGCTCACGCTCCACCTGCCGCGGCTATAGCGGCTGATCACGTACGCGAAAACCACCCGAAATTTTTTTGGTCAAAAGGGCAGGGGGATGCGGGGGACGTCGCACGATTGCACGGGCCACCACCAGTCCACCAACACATCATTACCACCAAGAGCGCGCGAACGCCGAAACGGTGTGCGCTTCGGTCGCTTCTGCTGCTGCCGCCGCGGCGCCGGCGGCAGCGGGTGGCCGTGCGCTCGAGTGGTGTGTTTGCCGGTGTCGTGCACGGTGTGGGGCCAGCGAG CTCGGTGTGTGGGGGCGATCGGGTGATTCGGTTTGGCCAAGATCGGCGTAGCGCCATTGTAAAATCCATCAGATTTTTTTTTTTTGGGTTCTTCTTTCTTTTGGTTTGCGCATTTGTGTCTCGCAGAAAAGAAATGTACAAGATTAATCCCACAGATTAAGAAGCAAAATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL AU164297             [                                                                                                                                                                                                                                                                                        GAGAATTTGCATCGTTCTTGGGATGCTTTTTATACTTGTGAGAGAGGGTGGAGCTGTGACATTCACGTTCGTGAACCGGTGCACGGGGACGGTGTGGCCGGGCATCCTGTCGAACGCCGGGAGCGCGAGGATGGACCCGACGGGGTTCGAGCTGCCGCCCGGCGCGGCGCGCGCGG TGCCGGCGCCGACCGGCTGGTCCGGCCGCCTGTGGGCGCGCACGGGCTGCACGCAGGACGGCACCGGGAAGGTCGTGTGCGCGACGGGCGACTGCGGCTCGGGCACGCTGGAGTGCGCCGGCCGCGGCGCGGCGCCCCCGGCCACGCTGGCGGAGTTCACG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL C74293               [                                                                                                                                                                                                                                                                                         AGAATTTGCATCGTTCTTGGGATGCTTTTTATACTTGTGAGAGAGGGTGGAGCTGTGACATTCACGTTCGTGAACCGGTGCACGGGGACGGTGTGGCCGGGCATCCTGTCGAACGCCGGGAGCGCGAGGATGGACCCGACGGGGTTCGAGCTGCCGCCCGGCGCGGCGC CGCGGTTGCCGGCGCCGACCGGCTGGTCCGGCCGCCTGTTGGCGCGCACGGGCTNCACGCAGGACGGCACCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL OSS15743A            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            GACGGTGCCGGGCGTGACCACGGACGCCCCACCGGACATGGCAAGGCCGATA GCATGCCAAGGCGGCGGCGGCGGCGGGGGCGCCGGCCAAGGCGTGATGCTGGGCGACAACTCCTGGCTCGCCAGCCTCGCCATGGGCGACGCGTCGTCCTCGCGGAGAGCCTCGCGGCTGGCCCTCCTGGCCGCGNCCCTCGCGCTGCTCACGCTCCACCTGCCGCGGCTATAGCGGNTGATCACGTACGCGAAAACCACCCGAAATTTTTTTGGTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CA765004             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      gaCGAGACAAGGGGGGGGGGGGCGATCGGGTGATTCGGTTTGGCCAAGATCGGCGTGGCACCATTGTAAAATCCATCAGA  TTTTTTTTTTGGGTTCTTCTTTCTTTTGGTTTGCGCATTTGTGTCTCGCAGAAAAGAAATGTACAAGATTAATCCCACAGATTAAGAAGCAAAATGATTATGAACGCACTCGGCCGTCCTGTTTCCCGGGCTCTAATCGTAGTGGCGAACCAACTAACATGATCACGGTTGGTTGACATCGTTGTTAACGCACTGGACAGATACCTGCCACGTTATTACAGCTCTAACCCACTTGTACTATCAATATGGCTGCATACCCCTACAGTTTTCGTAGACGTGGCCGTCCCATTATTGCTGCCACTCTACTACAGAAGACTCGACCTATGGCTACACTACAAGTACTAGGACACGTATGCTCAATGTTTTCTTTTTCTTCTCATTTTTTGCCGCTGATGATTGATTGCTAGCAAGGTAGCTTCATGCATAGTGATTCCATACCCCAATCAAAGTACCAAACCTCTGAAAGGAACTAATGGCATGATAATGGCCTAGGTGTCTGCACGGGCTAAAATACTATACTACTCCAAATGTATACTAAAGTCTACAACATATAGCGTAC]




>consensus_9309#0
TCTTCAGTCTCTTCCTCCTAATCTTGATACTAGTTGATGGGTGGTTGACGTTTCATCGAG
CTATCCTAGCTCAAGGCTTCTCTATCCCTTTCTACTCTCCCACTCCTCTCTAACCACTGT
ACTATATACTAGCACTGAAGCTGGACACTGATACAAAATTCCGTACTAATATTGACAACT
GACTACCTATACTGGTGTGGCACCATTATATACCTCTTCTCCCGCCTGCCATTACTAACC
ACCAGCCGGAGCTACATTGCTTCGAGATGATGGGAATTCAGAGAATTTGCATCGTTCTTG
GGATGCTTTTTATACTTGTGAGAGAGGGTGGAGCTGTGACATTCACGTTCGTGAACCGGT
GCACGGGGACGGTGTGGCCGGGCATCCTGTCGAACGCCGGGAGCGCGAGGATGGACCCGA
CGGGGTTCGAGCTGCCGCCCGGCGCGGCGCGCGCGGTGCCGGCGCCGACCGGCTGGTCCG
GCCGCCTGTGGGCGCGCACGGGCTGCACGCAGGACGGCACCGGGAAGGTCGTGTGCGCGA
CGGGCGACTGCGGCTCGGGCACGCTGGAGTGCGCCGGCCGCGGCGCGGCGCCCCCGGCCA
CGCTGGCGGAGTTCACGCTCGACGGCGGCGGCCGCAACGACTTCTACGACGTCAGCCTCG
TGGACGGGTACAACCTGCCGTTGCTGGTGGAGCCCTCGGGCGCCCTCGGCGCGACGGCGA
CGACGTGCGCGGCCGCCGGGTGCGCGGCCGACCTGAACGCGCGGTGCCCGGCCGAGCTCC
GCGCCGTGGGCGGCGCGGCGTGCCGGAGCGCGTGCGACGCGTTCGGCAAGCCCGAGTTCT
GCTGCAGCGGCGCGTACGCCAACCCGAACACCTGCCGCCCCACCGCCTACTCCCAGGTCT
TCAAGTCGGCGTGCCCGCGCTCCTACAGCTACGCCTACGACGACCCGACGAGCACCTTCA
CCTGCGCCGGCGGCCGCGACTACACCATCACCTTCTGCCCCGTCGCCACCCCAAGCCTGA
AATCTGCGGGAGGAACGACGACACCGACGACGACGGTGCCGGGCGTGACCACGGACGCCC
CACCGGACATGGCAAGGCCGATAGGCAGCCAAGGCGGCGGCGGCGGCGGGGGCGCCGGCC
AAGGCGTGATGCTGGGCGACAACTCCTGGCTCGCCAGCCTCGCCATGGGCGACGCGTCGT
CCTCGCGGAGAGCCTCGCGGCTGGCCCTCCTGGCCGCGCCCCTCGCGCTGCTCACGCTCC
ACCTGCCGCGGCTATAGCGGCTGATCACGTACGCGAAAACCACCCGAAATTTTTTTGGTC
AAAAGGGCAGGGGGATGCGGGGGACGTCGCACGATTGCACGGGCCACCACCAGTCCACCA
ACACATCATTACCACCAAGAGCGCGCGAACGCCGAAACGGTGTGCGCTTCGGTCGCTTCT
GCTGCTGCCGCCGCGGCGCCGGCGGCAGCGGGTGGCCGTGCGCTCGAGTGGTGTGTTTGC
CGGTGTCGTGCACGGTGTGGGGCCAGCGAGCTCGGTGTGTGGGGGCGATCGGGTGATTCG
GTTTGGCCAAGATCGGCGTAGCGCCATTGTAAAATCCATCAGATTTTTTTTTTTTGGGTT
CTTCTTTCTTTTGGTTTGCGCATTTGTGTCTCGCAGAAAAGAAATGTACAAGATTAATCC
CACAGATTAAGAAGCAAAATGATTATGAACGCACTCGGCCGTCCTGTTTCCCGGGCTCTA
ATCGTAGTGGCGAACCAACTAACATGATCACGGTTGGTTGACATCGTTGTTAACGCACTG
GACAGATACCTGCCACGTTATTACAGCTCTAACCCACTTGTACTATCAATATGGCTGCAT
ACCCCTACAGTTTTCGTAGACGTGGCCGTCCCATTATTGCTGCCACTCTACTACAGAAGA
CTCGACCTATGGCTACACTACAAGTACTAGGACACGTATGCTCAATGTTTTCTTTTTCTT
CTCATTTTTTGCCGCTGATGATTGATTGCTAGCAAGGTAGCTTCATGCATAGTGATTCCA
TACCCCAATCAAAGTACCAAACCTCTGAAAGGAACTAATGGCATGATAATGGCCTAGGTG
TCTGCACGGGCTAAAATACTATACTACTCCAAATGTATACTAAAGTCTACAACATATAGC
GTAC

consensusID : consensus_9309#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 439
fasta sequence

                              [TGGGNTGCAGGATTCGGCTCGAGGACTACTGAGATNGCCTGCCTCGACGTGGGNAACGCGTCTTCCTCGCGGAGAGCCTCGCGGCTGGCCCTCCTGGCCGCNCCCCTCGCGCTGCTCACGCTCCACCTGCCGCGGCTATAGCGGCTGATCACGTACGCGAAAACCACCCGAAATTTTTTTGGTCAAAAGGGCAGGGGGATGCGGGGGACGTCGCACGATTGCACGGGCCNCCACCANTCCNCCAACACATCATTACCACCAAGAGCGCGCGAACGCCGAAACGGTGTGCGCTTCGGTCGCTTCTGCTGCTGCCGCCGCGGCNCCGGCGGCACGGGTGGCCGGTGCGCTCGACGGTGTGTCTGCCGGTGTCNTGCACNGTGTGGGGCCANCNAACTCNGTGTGTGNGGGCNATCGGGTGATTCCGTTTGGCCNANATCCG]

[+] EMBL AA753157             [TGGGNTGCAGGATTCGGCTCGAGGACTACTGAGATNGCCTGCCTCGACGTGGGNAACGCGTCTTCCTCGCGGAGAGCCTCGCGGCTGGCCCTCCTGGCCGCNCCCCTCGCGCTGCTCACGCTCCACCTGCCGCGGCTATAGCGGCTGATCACGTACGCGAAAACCACCCGAAATTTTTTTGGTCAAAAGGGCAGGGGGATGCGGGGGACGTCGCACGATTGCACGGGCCNCCACCANTCCNCCAACACATCATTACCACCAAGAGCGCGCGAACGCCGAAACGGTGTGCGCTTCGGTCGCTTCTGCTGCTGCCGCCGCGGCNCCGGCGGCACGGGTGGCCGGTGCGCTCGACGGTGTGTCTGCCGGTGTCNTGCACNGTGTGGGGCCANCNAACTCNGTGTGTGNGGGCNATCGGGTGATTCCGTTTGGCCNANATCCG]




>consensus_9309#1
TGGGNTGCAGGATTCGGCTCGAGGACTACTGAGATNGCCTGCCTCGACGTGGGNAACGCG
TCTTCCTCGCGGAGAGCCTCGCGGCTGGCCCTCCTGGCCGCNCCCCTCGCGCTGCTCACG
CTCCACCTGCCGCGGCTATAGCGGCTGATCACGTACGCGAAAACCACCCGAAATTTTTTT
GGTCAAAAGGGCAGGGGGATGCGGGGGACGTCGCACGATTGCACGGGCCNCCACCANTCC
NCCAACACATCATTACCACCAAGAGCGCGCGAACGCCGAAACGGTGTGCGCTTCGGTCGC
TTCTGCTGCTGCCGCCGCGGCNCCGGCGGCACGGGTGGCCGGTGCGCTCGACGGTGTGTC
TGCCGGTGTCNTGCACNGTGTGGGGCCANCNAACTCNGTGTGTGNGGGCNATCGGGTGAT
TCCGTTTGGCCNANATCCG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9309#0      TCTTCAGTCTCTTCCTCCTAATCTTGATACTAGTTGATGGGTGGTTGACGTTTCATCGAG 60
consensus_9309#1      ------------------------------------------------------------
                                                                                  

consensus_9309#0      CTATCCTAGCTCAAGGCTTCTCTATCCCTTTCTACTCTCCCACTCCTCTCTAACCACTGT 120
consensus_9309#1      ------------------------------------------------------------
                                                                                  

consensus_9309#0      ACTATATACTAGCACTGAAGCTGGACACTGATACAAAATTCCGTACTAATATTGACAACT 180
consensus_9309#1      ------------------------------------------------------------
                                                                                  

consensus_9309#0      GACTACCTATACTGGTGTGGCACCATTATATACCTCTTCTCCCGCCTGCCATTACTAACC 240
consensus_9309#1      ------------------------------------------------------------
                                                                                  

consensus_9309#0      ACCAGCCGGAGCTACATTGCTTCGAGATGATGGGAATTCAGAGAATTTGCATCGTTCTTG 300
consensus_9309#1      ------------------------------------------------------------
                                                                                  

consensus_9309#0      GGATGCTTTTTATACTTGTGAGAGAGGGTGGAGCTGTGACATTCACGTTCGTGAACCGGT 360
consensus_9309#1      ------------------------------------------------------------
                                                                                  

consensus_9309#0      GCACGGGGACGGTGTGGCCGGGCATCCTGTCGAACGCCGGGAGCGCGAGGATGGACCCGA 420
consensus_9309#1      ------------------------------------------------------------
                                                                                  

consensus_9309#0      CGGGGTTCGAGCTGCCGCCCGGCGCGGCGCGCGCGGTGCCGGCGCCGACCGGCTGGTCCG 480
consensus_9309#1      ------------------------------------------------------------
                                                                                  

consensus_9309#0      GCCGCCTGTGGGCGCGCACGGGCTGCACGCAGGACGGCACCGGGAAGGTCGTGTGCGCGA 540
consensus_9309#1      ------------------------------------------------------------
                                                                                  

consensus_9309#0      CGGGCGACTGCGGCTCGGGCACGCTGGAGTGCGCCGGCCGCGGCGCGGCGCCCCCGGCCA 600
consensus_9309#1      ------------------------------------------------------------
                                                                                  

consensus_9309#0      CGCTGGCGGAGTTCACGCTCGACGGCGGCGGCCGCAACGACTTCTACGACGTCAGCCTCG 660
consensus_9309#1      ------------------------------------------------------------
                                                                                  

consensus_9309#0      TGGACGGGTACAACCTGCCGTTGCTGGTGGAGCCCTCGGGCGCCCTCGGCGCGACGGCGA 720
consensus_9309#1      ------------------------------------------------------------
                                                                                  

consensus_9309#0      CGACGTGCGCGGCCGCCGGGTGCGCGGCCGACCTGAACGCGCGGTGCCCGGCCGAGCTCC 780
consensus_9309#1      ------------------------------------------------------------
                                                                                  

consensus_9309#0      GCGCCGTGGGCGGCGCGGCGTGCCGGAGCGCGTGCGACGCGTTCGGCAAGCCCGAGTTCT 840
consensus_9309#1      ------------------------------------------------------------
                                                                                  

consensus_9309#0      GCTGCAGCGGCGCGTACGCCAACCCGAACACCTGCCGCCCCACCGCCTACTCCCAGGTCT 900
consensus_9309#1      ------------------------------------------------------------
                                                                                  

consensus_9309#0      TCAAGTCGGCGTGCCCGCGCTCCTACAGCTACGCCTACGACGACCCGACGAGCACCTTCA 960
consensus_9309#1      ------------------------------------------------------------
                                                                                  

consensus_9309#0      CCTGCGCCGGCGGCCGCGACTACACCATCACCTTCTGCCCCGTCGCCACCCCAAGCCTGA 1020
consensus_9309#1      ------------------------------------------------------------
                                                                                  

consensus_9309#0      AATCTGCGGGAGGAACGACGACACCGACGACGACGGTGCCGGGCGTGACCACGGACGCCC 1080
consensus_9309#1      ------------------------------------------------------------
                                                                                  

consensus_9309#0      CACCGGACATGGCAAGGCCGATAGGCAGCCAAGGCGGCGGCGGCGGCGGGGGCGCCGGCC 1140
consensus_9309#1      -------------------------------------------------------TGG-- 3
                                                                              **  

consensus_9309#0      AAGGCGTGATGCTGGGCGACAACTCCTG-GCTCGCCAGCCTCGCCATGGGCGACGCGTCG 1199
consensus_9309#1      GNTGCAGGATTCGGCTCGAGGACTACTGAGATNGCCTGCCTCGACGTGGGNAACGCGTCT 63
                         **  *** * *  ***  *** *** * * *** ****** * ****  ******* 

consensus_9309#0      TCCTCGCGGAGAGCCTCGCGGCTGGCCCTCCTGGCCGCGCCCCTCGCGCTGCTCACGCTC 1259
consensus_9309#1      TCCTCGCGGAGAGCCTCGCGGCTGGCCCTCCTGGCCGCNCCCCTCGCGCTGCTCACGCTC 123
                      ************************************** *********************

consensus_9309#0      CACCTGCCGCGGCTATAGCGGCTGATCACGTACGCGAAAACCACCCGAAATTTTTTTGGT 1319
consensus_9309#1      CACCTGCCGCGGCTATAGCGGCTGATCACGTACGCGAAAACCACCCGAAATTTTTTTGGT 183
                      ************************************************************

consensus_9309#0      CAAAAGGGCAGGGGGATGCGGGGGACGTCGCACGATTGCACGGGCCACCACCAGTCCACC 1379
consensus_9309#1      CAAAAGGGCAGGGGGATGCGGGGGACGTCGCACGATTGCACGGGCCNCCACCANTCCNCC 243
                      ********************************************** ****** *** **

consensus_9309#0      AACACATCATTACCACCAAGAGCGCGCGAACGCCGAAACGGTGTGCGCTTCGGTCGCTTC 1439
consensus_9309#1      AACACATCATTACCACCAAGAGCGCGCGAACGCCGAAACGGTGTGCGCTTCGGTCGCTTC 303
                      ************************************************************

consensus_9309#0      TGCTGCTGCCGCCGCGGCGCCGGCGGCAGCGGGTGGCCG-TGCGCTCGAGTGGTGTGTTT 1498
consensus_9309#1      TGCTGCTGCCGCCGCGGCNCCGGCGGCA-CGGGTGGCCGGTGCGCTCGA-CGGTGTGTCT 361
                      ****************** ********* ********** *********  ******* *

consensus_9309#0      GCCGGTGTCGTGCACGGTGTGGGGCCAGCGAGCTCGGTGTGTGGGGGCGATCGGGTGATT 1558
consensus_9309#1      GCCGGTGTCNTGCACNGTGTGGGGCCANCNAACTCNGTGTGTGNGGGCNATCGGGTGATT 421
                      ********* ***** *********** * * *** ******* **** ***********

consensus_9309#0      CGGTTTGGCCAAGATCGGCGTAGCGCCATTGTAAAATCCATCAGATTTTTTTTTTTTGGG 1618
consensus_9309#1      CCGTTTGGCCNANATCCG------------------------------------------ 439
                      * ******** * *** *                                          

consensus_9309#0      TTCTTCTTTCTTTTGGTTTGCGCATTTGTGTCTCGCAGAAAAGAAATGTACAAGATTAAT 1678
consensus_9309#1      ------------------------------------------------------------
                                                                                  

consensus_9309#0      CCCACAGATTAAGAAGCAAAATGATTATGAACGCACTCGGCCGTCCTGTTTCCCGGGCTC 1738
consensus_9309#1      ------------------------------------------------------------
                                                                                  

consensus_9309#0      TAATCGTAGTGGCGAACCAACTAACATGATCACGGTTGGTTGACATCGTTGTTAACGCAC 1798
consensus_9309#1      ------------------------------------------------------------
                                                                                  

consensus_9309#0      TGGACAGATACCTGCCACGTTATTACAGCTCTAACCCACTTGTACTATCAATATGGCTGC 1858
consensus_9309#1      ------------------------------------------------------------
                                                                                  

consensus_9309#0      ATACCCCTACAGTTTTCGTAGACGTGGCCGTCCCATTATTGCTGCCACTCTACTACAGAA 1918
consensus_9309#1      ------------------------------------------------------------
                                                                                  

consensus_9309#0      GACTCGACCTATGGCTACACTACAAGTACTAGGACACGTATGCTCAATGTTTTCTTTTTC 1978
consensus_9309#1      ------------------------------------------------------------
                                                                                  

consensus_9309#0      TTCTCATTTTTTGCCGCTGATGATTGATTGCTAGCAAGGTAGCTTCATGCATAGTGATTC 2038
consensus_9309#1      ------------------------------------------------------------
                                                                                  

consensus_9309#0      CATACCCCAATCAAAGTACCAAACCTCTGAAAGGAACTAATGGCATGATAATGGCCTAGG 2098
consensus_9309#1      ------------------------------------------------------------
                                                                                  

consensus_9309#0      TGTCTGCACGGGCTAAAATACTATACTACTCCAAATGTATACTAAAGTCTACAACATATA 2158
consensus_9309#1      ------------------------------------------------------------
                                                                                  

consensus_9309#0      GCGTAC 2164
consensus_9309#1      ------