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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9324#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 2910 fasta sequence
[CACTAAACAAATCCGCGACACAATCCTCCGCCATTAAACTCTCTCTCTCCTCTCGACACCACATCACAGCAGTGAGGTGGTTGTTGGCGGAGGAGGGAGGCTGGCTGCTGCTGCTGCTGCCGCCGCCTCCATCCATGGCGGCTTCTCCTCCTCCTCCTCCTCGTCCCCTGCTGCTGCTTCTCCCGTTGCTGCTC---TGGGGCGTGGTGGTTGCGGCGGCGGCGGCGACGGATACGTTGAGGCAGGGGGAGTCGCTGACGGGGGCGGCGACGCTGGTGTCGTCGCCGTCGGGGGTGTTCGAGGTGGGGTTCTTCGCGCCGGACCCGAAGCTGCCGTCGCGGCTCTACCTCGGCATCTGGTACCGCAGCATCTCGCCGAGAACCGTCGTCTGGGTCGCCAACCGCGCCGCGCCGGCCACCGCGCCGTCGCCGTCGCTCACGCTCGCGGCCAACGGCGAGCTCCGCGTGCTCGACGGCTCCGCCGCGGACGCGGACGCGCCGCTCTTGTGGAGGTCGAACGCGTCCACGCAGTCCGCGCCACGCGGCGGGTACAAGGCCGTCATCCAGGACACCGGCAGCCTCGAGGTGCGCAGCGACGACGGCACGCTGTGGGACAGCTTCTGGCACCCGTCGGACACCATGCTGTCCGGGATGCGCATCACCGTGCGCACGCCCGGGAGGGGCCCCTCCGAGCCGATGCGCTTCACGTCGTGGACCAGCGAGACGGACCCCTCGCCGGGGCGGTACGCGCTCGGCCTCGACCCGGCCAACTCCGGCCAGGCCTACATCTGGAGAGATGGCAATGTCACCATTTGGAGGTCAGGACAATGGACTGGGCAGAATTTTGTGGGCATTCCTTGGAGACCACTGTACTTGTATGGGTTCAAGCCAGCAAATGATGCAAACTTAGGTGCATACTACACTTACACTGCATCAAACACATCTCTGCAAAGGTTTGTTGTTATGCCAAATGGTACAGACATCTGTTACATGGTTAAGAAGTCAGCACAAGAGTGGGAGACTGTCTGGATGCAACCATCAAATGAGTGTGAGTACTATGCTACGTGTGGCGCAAATGCTAAATGCACTGCCATGCAAGATGGCAAGGCAAAATGTACCTGCCTAAAAGGATTTCAGCCAAAGTTGCTTGATCAGTGGAATATGGGAAATGGGAGTCAAGGTTGTGTCAGGAGCCCACCTTTGGGTTGTCAGGTGAACCAAACTGGGGATGGATTTCTTTCTATCCCAAACATCAAGTGGCCGGATTTCTCATACTGGCCATCTACGGTGCAAGATGAGAATGGATGCATGAATGCTTGCCTCAGCAACTGCTCATGTGGTGCCTATGTCTACATGACTACAATAGGATGTCTACTGTGGGGTAGCGACCTGATCGACATGTACCAGTTTCAGAGTGGGGGATATACCCTAAACCTCAAACTTCCTGCTTCTGAGTTACGCTCACATCATGCAGTTTGGAATAGCCACAATAGTGTCTGCAGTGGTGCTATTTGTTTTGCTAGCTTGCCTCTTCCTGTGGTGGAAGCGTGGGAGGAATATCAAAGATGTGATGCACAAAAGTTGGAGGTCAATGCATACGTCTACACGATCTCAGCAGAATAGTGGTATGCTGGACATCTCGCAGTCGATTCCTTTTGAAGACGACACAGAGGATGGAAAAAGTCATGAACTCAAAGTATACTCCTTTGACCGGATAAAAGCTGCCACTTGTAATTTCAGTGACTCCAACAAGCTTGGAGCAGGAGGATTTGGTCCTGTATATATGGGAAAATTACCTGGGGGAGAAGAAGTAGCCGTTAAGAGGCTTTGTAGGAAATCAGGTCAAGGCCTTGAGGAGTTCAAGAATGAGGTCATACTTATCGCAAAACTGCAGCATCGCAATCTTGTGAGACTATTAGGATGCTGCATACAGGGAGAAGAGAAGATCTTGGTGTACGAGTACATGCCTAACAAAAGTCTAGATGCATTCCTCTTCAATCCTGAGAAGCAAGGGCTCCTAGACTGGAGGAAACGGTTTGATATAATTGAAGGGATTGCTCGAGGGCTGTTATATCTCCACCGGGACTCAAGGTTGCGAGTTGTTCATCGTGATCTCAAGGCCAGCAACATTCTCCTGGACAAAGACATGAACCCCAAGATTTCAGATTTTGGAATGGCCAGGATGTTTGGAGGGGATCAAAACCAATTCAACACGAATCGTGTGGTTGGAACATTTGGCTATATGTCGCCGGAATATGCTATGGAAGGCATTTTCTCAGTAAAGTCCGATATTTATAGCTTTGGAGTTCTAATGTTGGAGATCATCACAGGAAAGAGGGCTTTGAGCTTTCATGGTCAACAAGACTCCCTAAACATTGCAGGATTTGCATGGCGACAATGGAATGAAGACAAGGGCGAGGAACTGATTGATCCATTGATAAGAGCATCGTGCTCACTTCGACAAGTCTTGAGATGCATCCACATTGCATTGCTATGTGTTCAAGATCATGCGCAAGAACGTCC-TGATATCCCTGCGGTCATACTGATGTTGAGC-AGCGACAGCT-CCAGCCTTCCCATGCCAAGACCGCCTACCCTGATGCTCCATGGTCGTTC-GGCTGAGACGAGCAAATCAAGTGAGAAGGATCAGAGCCACTCCATCGGTACTGTGTCAATGACACAATTGCATGGAAGATAGCTTAGCAGGGACAACATTGTGAAAATCATTAACAGCTTGGTTGTTCTTTTTTTCCCCTTTTCTCTGCTATTACAAAGGTATTGTCTTGTGTAGATTAGTATTCAGGGGCCTTCACTCATGCTAATTTGTAAAATAACATTTATGTCATATATAAAATGGCATGTAAGTTTTGTGAAATGAAGCATGTGTAGATGATTGTGGTCGCCAAAAAAAAAGGAA]
[+] EMBL AK102758 [CACTAAACAAATCCGCGACACAATCCTCCGCCATTAAACTCTCTCTCTCCTCTCGACACCACATCACAGCAGTGAGGTGGTTGTTGGCGGAGGAGGGAGGCTGGCTGCTGCTGCTGCTGCCGCCGCCTCCATCCATGGCGGCTTCTCCTCCTCCTCCTCCTCGTCCCCTGCTGCTGCTTCTCCCGTTGCTGCTC TGGGGCGTGGTGGTTGCGGCGGCGGCGGCGACGGATACGTTGAGGCAGGGGGAGTCGCTGACGGGGGCGGCGACGCTGGTGTCGTCGCCGTCGGGGGTGTTCGAGGTGGGGTTCTTCGCGCCGGACCCGAAGCTGCCGTCGCGGCTCTACCTCGGCATCTGGTACCGCAGCATCTCGCCGAGAACCGTCGTCTGGGTCGCCAACCGCGCCGCGCCGGCCACCGCGCCGTCGCCGTCGCTCACGCTCGCGGCCAACGGCGAGCTCCGCGTGCTCGACGGCTCCGCCGCGGACGCGGACGCGCCGCTCTTGTGGAGGTCGAACGCGTCCACGCAGTCCGCGCCACGCGGCGGGTACAAGGCCGTCATCCAGGACACCGGCAGCCTCGAGGTGCGCAGCGACGACGGCACGCTGTGGGACAGCTTCTGGCACCCGTCGGACACCATGCTGTCCGGGATGCGCATCACCGTGCGCACGCCCGGGAGGGGCCCCTCCGAGCCGATGCGCTTCACGTCGTGGACCAGCGAGACGGACCCCTCGCCGGGGCGGTACGCGCTCGGCCTCGACCCGGCCAACTCCGGCCAGGCCTACATCTGGAGAGATGGCAATGTCACCATTTGGAGGTCAGGACAATGGACTGGGCAGAATTTTGTGGGCATTCCTTGGAGACCACTGTACTTGTATGGGTTCAAGCCAGCAAATGATGCAAACTTAGGTGCATACTACACTTACACTGCATCAAACACATCTCTGCAAAGGTTTGTTGTTATGCCAAATGGTACAGACATCTGTTACATGGTTAAGAAGTCAGCACAAGAGTGGGAGACTGTCTGGATGCAACCATCAAATGAGTGTGAGTACTATGCTACGTGTGGCGCAAATGCTAAATGCACTGCCATGCAAGATGGCAAGGCAAAATGTACCTGCCTAAAAGGATTTCAGCCAAAGTTGCTTGATCAGTGGAATATGGGAAATGGGAGTCAAGGTTGTGTCAGGAGCCCACCTTTGGGTTGTCAGGTGAACCAAACTGGGGATGGATTTCTTTCTATCCCAAACATCAAGTGGCCGGATTTCTCATACTGGCCATCTACGGTGCAAGATGAGAATGGATGCATGAATGCTTGCCTCAGCAACTGCTCATGTGGTGCCTATGTCTACATGACTACAATAGGATGTCTACTGTGGGGTAGCGACCTGATCGACATGTACCAGTTTCAGAGTGGGGGATATACCCTAAACCTCAAACTTCCTGCTTCTGAGTTACGCTCACATCATGCAGTTTGGAATAGCCACAATAGTGTCTGCAGTGGTGCTATTTGTTTTGCTAGCTTGCCTCTTCCTGTGGTGGAAGCGTGGGAGGAATATCAAAGATGTGATGCACAAAAGTTGGAGGTCAATGCATACGTCTACACGATCTCAGCAGAATAGTGGTATGCTGGACATCTCGCAGTCGATTCCTTTTGAAGACGACACAGAGGATGGAAAAAGTCATGAACTCAAAGTATACTCCTTTGACCGGATAAAAGCTGCCACTTGTAATTTCAGTGACTCCAACAAGCTTGGAGCAGGAGGATTTGGTCCTGTATATATGGGAAAATTACCTGGGGGAGAAGAAGTAGCCGTTAAGAGGCTTTGTAGGAAATCAGGTCAAGGCCTTGAGGAGTTCAAGAATGAGGTCATACTTATCGCAAAACTGCAGCATCGCAATCTTGTGAGACTATTAGGATGCTGCATACAGGGAGAAGAGAAGATCTTGGTGTACGAGTACATGCCTAACAAAAGTCTAGATGCATTCCTCTTCAATCCTGAGAAGCAAGGGCTCCTAGACTGGAGGAAACGGTTTGATATAATTGAAGGGATTGCTCGAGGGCTGTTATATCTCCACCGGGACTCAAGGTTGCGAGTTGTTCATCGTGATCTCAAGGCCAGCAACATTCTCCTGGACAAAGACATGAACCCCAAGATTTCAGATTTTGGAATGGCCAGGATGTTTGGAGGGGATCAAAACCAATTCAACACGAATCGTGTGGTTGGAACATTTGGCTATATGTCGCCGGAATATGCTATGGAAGGCATTTTCTCAGTAAAGTCCGATATTTATAGCTTTGGAGTTCTAATGTTGGAGATCATCACAGGAAAGAGGGCTTTGAGCTTTCATGGTCAACAAGACTCCCTAAACATTGCAGGATTTGCATGGCGACAATGGAATGAAGACAAGGGCGAGGAACTGATTGATCCATTGATAAGAGCATCGTGCTCACTTCGACAAGTCTTGAGATGCATCCACATTGCATTGCTATGTGTTCAAGATCATGCGCAAGAACGTCC TGATATCCCTGCGGTCATACTGATGTTGAGC AGCGACAGCT CCAGCCTTCCCATGCCAAGACCGCCTACCCTGATGCTCCATGGTCGTTC GGCTGAGACGAGCAAATCAAGTGAGAAGGATCAGAGCCACTCCATCGGTACTGTGTCAATGACACAATTGCATGGAAGATAGCTTAGCAGGGACAACATTGTGAAAATCATTAACAGCTTGGTTGTTCTTTTTTTCCCCTTTTCTCTGCTATTACAAAGGTATTGTCTTGTGTAGATTAGTATTCAGGGGCCTTCACTCATGCTAATTTGTAAAATAACATTTATGTCATATATAAAATGGCATGTAAGTTTTGTGAAATGAAGCATGTGTAGATGAT ]
[+] EMBL CB641433 [ AATCCCCTACACAATCCTCCGCCATTAAACTCTCTCTCTCCTCTCGACACCACATCACAGCAGTGAGGTGGTTGTTGGCGGAGGAGGGAGGCTGGCTGCTGCTGCTGCTGCCGCCGCCTCCATCCATGGCGGCTTCTCCTCCTCCTCCTCCTCGTCCCCTGCTGCTGCTTCTCCCGTTGCTGCTCGTTTGGGGCGTGGTGGTTGCGGCGGCGGCGGCGACGGATACGTTGAGGCAGGGGGAGTCGCTGACGGGGGCGGCGACGCTGGTGTCGTCGCCGTCGGGGGTGTTCGAGGTGGGGTTCTTCGCGCCGGACCCGAAGCTGCCGTCGCGGCTCTACCTCGGCATCTGGTACCGCAGCATCTCGCCGAGAACCGTCGTCTGGGTCGCCAACCGCGCCGCGCCGGCCACCGCGCCGTCGCCGTCGCTCACGCTCGCGGCCAACGGCGAGCTCCGCGTGCTCGACGGCTCCGCCGCGGACGCGGACGCGCCGCTCTTGTGGAGGTCGAACGCGTCCACGCAGTCCGCGCCACGCGGCGGGTACAAGGCCGTCATCCAGGACACCGGCAGCCTCGAGGTGCGCATCTACGACGGCACTCTGTGGGACAGCTTCTGGCACCCGTCGGACACCATGCTGTCCGGGATGCGCATCACCGTGCGCACGCCCGGGA ]
[+] EMBL CA999435 [ AAAACTGCAGCATCGCAATCTTGTGAGACTATTAGGATGCTGCATACAGGGAGAAGAGAAGATCTTGGTGTACGAGTACATGCCTAACAAAAGTCTAGATGCATTCCTCTTCAATCCTGAGAAGCAAGGGCTCCTAGACTGGAGGAAACGGTTTGATATAATTGAAGGGATTGCTCGAGGGCTGTTATATCTCCACCGGGACTCAAGGTTGCGAGTTGTT ]
[-] EMBL CB641434 [ CATTTTCCTGGACAAAGACATGAACCCCAAGATTTCAGATTTTGGAATGGCCAGGATGTTTGGAGGGGATCAAAACCAATTCAACACGAATCGTGTGGTTGGAACATTTGGCTATATGTCGCCGGAATATGCTATGGAAGGCATTTTCTCAGTAAAGTCCGATATTTATAGCTTTGGAGTTCTAATGTTGGAGATCATCACAGGAAAGAGGGCTTTGAGCTTTCATGGTCAACAAGACTCCCTAAACATTGCAGGATTTGCATGGCGACAATGGAATGAAGACAAGGGCGAGGAACTGATTGATCCATTGATAAGAGCATCGTGCTCACTTCGACAAGTCTTGAGATGCATCCACATTGCATTGCTATGTGTTCAAGATCATGCGCAAGAACGTCC TGATATCCCTGCGGTCATACTGATGTTGAGC AGCGACAGCT CCAGCCTTCCCATGCCAAGACCGCCTACCCTGATGCTCCATGGTCGTTC GGCTGAGACGAGCAAATCAAGTGAGAAGGATCAGAGCCACTCCATCGGTACTGTGTCAATGACACAATTGCATGGAAGATAGCTTAGCAGGGACAACATTGTGAAAATCATTAACAGCTGGGTGGTTCTTTTTTTCCCCTTTTCTCTGCTATTACAAAGGTATTGTCTTGTGTAGATTAGTATTCAGGGGCCTTCATTCATGCTAATTTGTAAAATAACATTTATGTCATATATAAAATGGCATGTAAGTTTTGTGAAATGAAGCATGTGTAGATGATTGTGGTCGCCAAAAAAAAAGGAA]
[-] EMBL CB658280 [ GAGGGGATCAAAACCAATTCATCACGAATCGTGTGGTTGGAACATTTGGCTATATGTCGCCGGAATATGCTATGGAAGGCATTTTCTCAGTAAAGTCCGATATTTATAACTTTGGAGTTCTAATGTTGGAGATCATCACAGGAAAGAGGGCTTTGAGCTTTCATGGTCAACAAGACTCCCTAAACATTGCAGGATTTGCATGGCGACAATGGAATGAAGACAAGGGCGAGGAACTGATTGATCCATTGATAAGAGCATCGTGCTCACTTCGACAAGTCATGAGATGCATCCACATTGCATTCCTATGTGTTCAAGATCATGCGCAAGAAAGTCC TGATATCCCTGCGGTCATACTTATGTTGAGC AGAGACAGGT CCAGCTTTa ]
[-] EMBL AB038524 [ GCATTGCTATGTGTTCAAGATCATGCGCAAGAACGTCCTTGATATCCCTGCGGTCATACTGATGTTGAGCAAGCGACAACTCCCAGCCTTCCCATGCCAAGACCGCCTACCCTGATGCTCCATGGTCGTTCGGGCTGAGACGAGCAAATCAAGTGAGAAGGATCAGAGCCACTCCATCGGTACTGTGTCAATGACACAATTGCATGGAAGATAGCTTAGCAGGGACAACATTGTGAAAATCATTAACAGCTTGGTTGTTCTTTTTTTCCCCTTTTCTCTGCTATTACAAAGGTATTGTCTTGT ]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||