cluster # 9327

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Oryza sativa
cluster # 9327 cluster # 9327 Sequences # 6 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9327#0 length = 1200 sequences # 6
consensusID : consensus_9327#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1200
fasta sequence
                              [CCTCCGCTCCGGCCCCCTCATCGATCGAGCTCGCAGCCGCCGTGTTCCCCGCC-GGGGAAGGTCGTCCTTGCCGTTGGGTGGTGTTCCCGGCGCTGGATTGACGCCATGAGGAAGAAGCTGGACACCCGCTTCCCCGCGCCTCGGATTAAGAAAATCATGCAAGCAGATGAAGATGTTGGCAAGATTGCTTTAGCTGTACCTGTTCTAGTGTCAAAAGCATTGGAATTATTTCTGCAA-GACTTGTGTAATAGGACATATGACATTACAGTGCAAA-GAGGGGTCAAGACTCTGAGTTCTTCCCATTTGAAACAGTGCATACATAGTTATAATGTTTACGATTTCTTG-AGGGATGTCGTCAGTAAAGTTCCAGACATGGGTACATCTGATGCTGGTGTTGATGATAAACTTGGCAAAAGGAGGAAAACTGCTGAAGATGACAGTG-AAGAGGAATCAAAGCGGACAAGAAATGAGGCAGCAAGCCAGACAAGCACTGGTAGAGGGCGTGGGAGGGGTCGGGGAAGAGGCCGACGTGGTGGGCGTGTGTCTGAGAGGGAGATTATTTCCGCTTACGAAAAATTTGAGGAGAACCATGAGTTTCCTCCAGGTCAATTTAGCAAGCCTTCTCAGCTGAAGGTAGATGTTTCAGTTGATGGTACAGATGCAATTGAAACAAAGGAGGCTACCCCATTAAGCAACGCAAGAGCTTCTCTAAGGAACATTGACTTAAACATAGAGCTTACTGACTATGATGATGAGGGTTCAGCTCCACTGGAGGTCCAGCCTCCAGCTCCGGCAGCAGGTGTGGTTACAACCTCTTCAGGACCACTTGTTTCGGAGGTGAACGAAGAGGCGAAGACCAAAGACTTTCTAGGATGGCAATTGCCTGAGCTGACCAAGATGGCCATGGACCCTGTTCAGTTTGCCTTGTCTTCAAACCATAGGTTAGAGGAGGATGAGGATTATGACAACGAAGAATGATAACTTGCCCCTTTTAGGTTAAGAAGCTGATAGATAGACATGACTTTTGTCTATTGTACATCCTTGTAGCCCAGCTTAACTCTGTAGCTGATCTTGTATAATATGTGTACCTGCTGAAGCTGCAGTAGTTTAGGATGTTACAGAGGTTTATCGATCGATAGCTAGCAACTATGTTGACAGACAGATTCATCAGTTGTACATCCTATCTGATCTCCAGNTTAT]

[+] EMBL AK068320             [CCTCCGCTCCGGCCCCCTCATCGATCGAGCTCGCAGCCGCCGTGTTCCCCGCC GGGGAAGGTCGTCCTTGCCGTTGGGTGGTGTTCCCGGCGCTGGATTGACGCCATGAGGAAGAAGCTGGACACCCGCTTCCCCGCGCCTCGGATTAAGAAAATCATGCAAGCAGATGAAGATGTTGGCAAGATTGCTTTAGCTGTACCTGTTCTAGTGTCAAAAGCATTGGAATTATTTCTGCAA GACTTGTGTAATAGGACATATGACATTACAGTGCAAA GAGGGGTCAAGACTCTGAGTTCTTCCCATTTGAAACAGTGCATACATAGTTATAATGTTTACGATTTCTTG AGGGATGTCGTCAGTAAAGTTCCAGACATGGGTACATCTGATGCTGGTGTTGATGATAAACTTGGCAAAAGGAGGAAAACTGCTGAAGATGACAGTG AAGAGGAATCAAAGCGGACAAGAAATGAGGCAGCAAGCCAGACAAGCACTGGTAGAGGGCGTGGGAGGGGTCGGGGAAGAGGCCGACGTGGTGGGCGTGTGTCTGAGAGGGAGATTATTTCCGCTTACGAAAAATTTGAGGAGAACCATGAGTTTCCTCCAGGTCAATTTAGCAAGCCTTCTCAGCTGAAGGTAGATGTTTCAGTTGATGGTACAGATGCAATTGAAACAAAGGAGGCTACCCCATTAAGCAACGCAAGAGCTTCTCTAAGGAACATTGACTTAAACATAGAGCTTACTGACTATGATGATGAGGGTTCAGCTCCACTGGAGGTCCAGCCTCCAGCTCCGGCAGCAGGTGTGGTTACAACCTCTTCAGGACCACTTGTTTCGGAGGTGAACGAAGAGGCGAAGACCAAAGACTTTCTAGGATGGCAATTGCCTGAGCTGACCAAGATGGCCATGGACCCTGTTCAGTTTGCCTTGTCTTCAAACCATAGGTTAGAGGAGGATGAGGATTATGACAACGAAGAATGATAACTTGCCCCTTTTAGGTTAAGAAGCTGATAGATAGACATGACTTTTGTCTTTTGTACATCCTTGTAGCCCAGCTTAACTCTGTAGCTGATCTTGTATAATGTGTGTACCTGCTGAAGCTGCAGTAGTTTAGGATGTTACAGAGGTTTATCGATCGATAGCTAGCAACTATGTTGACAGACAGATTCATCAGTTGTACATCCTATCTGATCT         ]
[+] EMBL AF074781             [                     CGATCGAGCTCGCAGCCGCCGTGTTCCCCGCCGGGGGAAGGTCGTCCTTGCCGTTGGGTGGTGTTCCCGGCGCTGGATTGACGCCATGAGGAAGAAGCTGGACACCCGCTTCCCCGCGCCTCGGATTAAGAAAATCATGCAAGCAGATGAAGATGTTGGCAAGATTGCTTTAGCTGTACCTGTTCTAGTGTCAAAAGCATTGGAATTATTTCTGCAA GACTTGTGTAATAGGACATATGACATTACAGTGCAAA GAGGGGTCAAGACTCTGAGTTCTTCCCATTTGAAACAGTGCATACATAGTTATAATGTTTACGATTTCTTG AGGGATGTCGTCAGTAAAGTTCCAGACATGGGTACATCTGATGCTGGTGTTGATGATAAACTTGGCAAAAGGAGGAAAACTGCTGAAGATGACAGTG AAGAGGAATCNAAGCGGACAAGAAATGAGGCAGCAAGCCAGACAAGCACTGGTANAAGGCGTGGGAAGGGTCCGGGAAAAAGCCGACGTGGTGGGCGTGTGTCTGAAAAGGANATTATTTCCGCTTACGAAAAATTTGAGGAGAACCATGANTTTCCTCCANGTCAATTTAACAAGCCTTCTCAGCTGAAGGTNGATNTTTCAGTTGATGGTACANATGCCATTGAAAC AAGGA GCTA CCCATTAAGCAACGCCAGANC TCTCTAAGGAACATTGACTTAAACATANAACTTACTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL AF074782             [                     cnATCGAGCTCGCANCCGCCGTGTTCCCCGCC GGGGAAGGTCGTCCTTGCCGTTGGGTGGTGTTCCCGGCGCTGGATTGACGCCATGAGGAANAAGCTGGACANCCGCTTCCCCGCGCCTCGGATTAATAAAATCATGCAANCAGATGAAGATNTTGGCNAGATNGCTTTATCTGTACCTGTTCTAGTGTCAAAATCATTGGAATTATTTCTGCAANGACTTGTGTAATAGGACATATGACATTACAGTGCAAACGAGGGGTCAANACTCTNAGTTCTTCCCATTTGAAACAGTGCATNCATACTTATAATGTTTACAATTTCTTGAAAGGATGTCCTCAATAAAGTTCCANACATGGGTACATCTGATGCTGGTGTTGATGATAAACTTGGCAAAAGGANGAAAACTGCTGANCATGACAGTGAAAGANGAATCAAAGCGGACAAGAAATGAAGCNGCAAGCCAGACAAGCACTGGTNCAAGGCGTGGGAAGGGTCcg                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CF309613             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                        CAAAGCGGACAAGAAATGAGGCAGCAAGCCAGACAAGCACTGGTAGAGGGCGTGGGAGGGGTCGGGGAAGAGGCCGACGTGGTGGGCGTGTGTCTGAGAGGGAGATTATTTCCGCTTACGAAAAATTTGAGGAGAACCATGAGTTTCCTCCAGGTCAATTTAGCAAGCCTTCTCAGCTGAAGGTAGATGTTTCAGTTGATGGTACAGATGCAATTGAAACAAAGGAGGCTACCCCATTAAGCAACGCAAGAGCTTCTCTAAGGAACATTGACTTAAACATAGAGCTTACTGACTATGATGATGAGGGTTCAGCTCCACTGGAGGTCCAGCCTCCAGCTCCGGCAGCAGGTGTGGTTACAACCTCTTCAGGACCACTTGTTTCGGAGGTGAACGAAGAGGCGAAGACCAAAGACTTTCTAGGATGGCAATTGCCTGAGCTGACCAAGATGGCCATGGACCCTGTTCAGTTTGCCTTGTCTTCAAACCATAGGTTAGAGGAGGATGAGGATTATGACAACGAAGAATGATAACTTGCCCCTTTTAGGTTAAGAAGCTGATAGATAGACATGACTTTTGTCTATTGTACATCCTTGTAGCCCAGCTTAACTCTGTAGCTGATCTTGTATAATATGTGTACCTGCTGAAGC                                                                                                      ]
[+] EMBL CA765925             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      aGGGGAAGAGGCCGACGTGGTGGGCGTGTGTCTGAGAGGGAGATTATTTCCGCTTACGAAAAATTTGAGGAGAACCATGAGTTTCCTCCAGGTCAATTTAGCAAGCCTTCTCAGCTGAAGGTAGATGTTTCAGTTGATGGTACAGATGCAATTGAAACAAAGGAGGCTACCCCATTAAGCAACGCAAGAGCTTCTCTAAGGAACATTGACTTAAACATAGAGCTTACTGACTATGATGATGAGGGTTCAGCTCCACTGGAGGTCCAGCCTCCAGCTCCGGCAGCAGGTGTGGTTACAACCTCTTCAGGACCACTTGTTTCGGAGGTGAACGAAGAGGCGAAGACCAAAGACTTTCTAGGATGGCAATTGCCTGAGCTGACCAAGATGGCCATGGACCCTGTTCAGTTTGCCTTGTCTTCAAACCATAGGTTAGGGGAGGATGAGGATTATGACAACGAAGAATGATAACTTGCCCCTTTTAGGTTAAGAAGCTGATAGATAGACATGACTTTTGTCTATTGTACATCCTTGTAGCCCAGCTTAACTCTGTAGCTGATCTTGTATAATATGTGTACCTACTGAAGCTGCAGTAGTTTAGGATGTTACAGAGGTTTATCGATCGATAGCTAGCAACTATGTTGACAGACAGATTCATCAGTTGTACATCCTATCTGATCTCCAGN    ]
[+] EMBL AK060192             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              AACCATGAGTTTCCTCCAGGTCAATTTAGCAAGCCTTCTCAGCTGAAGGTAGATGTTTCAGTTGATGGCACAGATGCAATTGAAACAAAGGAGGCTACCCCATTAAGCAACGCAAGAGCTTCTCTAAGGAACATTGACTTAAACATAGAGCTTACTGACTATGATGATGAGGGTTCAGCTCCACTGGAGGTCCAGCCTCCAGCTCCGGCAGCAGGTGTGGTTACAACCTCTTCAGGACCACTTGTTTCGGAGGTGAACGAAGAGGCGAAGACCAAAGACTTTCTAGGATGGCAATTGCCTGAGCTGACCAAGATGGCCATGGACCCTGTTCAGTTTGCCTTGTCTTCAAACCATAGGTTAGAGGAGGATGAGGATTATGACAACGAAGAATGATAACTTGCCCCTTTTAGGTTAAGAAGCTGATAGATAGACATGACTTTTGTCTATTGTACATCCTTGTAGCCCAGCTTAACTCTGTAGCTGATCTTGTATAATATGTGTACCTGCTGAAGCTGCAGTAGTTTAGGATGTTACAGAGGTTTATCGATCGATAGCTAGCAACTATGTTGACAGACAGATTCATCAGTTGTACATCCTATCTGATCTCCAGTTTAT]




>consensus_9327#0
CCTCCGCTCCGGCCCCCTCATCGATCGAGCTCGCAGCCGCCGTGTTCCCCGCCGGGGAAG
GTCGTCCTTGCCGTTGGGTGGTGTTCCCGGCGCTGGATTGACGCCATGAGGAAGAAGCTG
GACACCCGCTTCCCCGCGCCTCGGATTAAGAAAATCATGCAAGCAGATGAAGATGTTGGC
AAGATTGCTTTAGCTGTACCTGTTCTAGTGTCAAAAGCATTGGAATTATTTCTGCAAGAC
TTGTGTAATAGGACATATGACATTACAGTGCAAAGAGGGGTCAAGACTCTGAGTTCTTCC
CATTTGAAACAGTGCATACATAGTTATAATGTTTACGATTTCTTGAGGGATGTCGTCAGT
AAAGTTCCAGACATGGGTACATCTGATGCTGGTGTTGATGATAAACTTGGCAAAAGGAGG
AAAACTGCTGAAGATGACAGTGAAGAGGAATCAAAGCGGACAAGAAATGAGGCAGCAAGC
CAGACAAGCACTGGTAGAGGGCGTGGGAGGGGTCGGGGAAGAGGCCGACGTGGTGGGCGT
GTGTCTGAGAGGGAGATTATTTCCGCTTACGAAAAATTTGAGGAGAACCATGAGTTTCCT
CCAGGTCAATTTAGCAAGCCTTCTCAGCTGAAGGTAGATGTTTCAGTTGATGGTACAGAT
GCAATTGAAACAAAGGAGGCTACCCCATTAAGCAACGCAAGAGCTTCTCTAAGGAACATT
GACTTAAACATAGAGCTTACTGACTATGATGATGAGGGTTCAGCTCCACTGGAGGTCCAG
CCTCCAGCTCCGGCAGCAGGTGTGGTTACAACCTCTTCAGGACCACTTGTTTCGGAGGTG
AACGAAGAGGCGAAGACCAAAGACTTTCTAGGATGGCAATTGCCTGAGCTGACCAAGATG
GCCATGGACCCTGTTCAGTTTGCCTTGTCTTCAAACCATAGGTTAGAGGAGGATGAGGAT
TATGACAACGAAGAATGATAACTTGCCCCTTTTAGGTTAAGAAGCTGATAGATAGACATG
ACTTTTGTCTATTGTACATCCTTGTAGCCCAGCTTAACTCTGTAGCTGATCTTGTATAAT
ATGTGTACCTGCTGAAGCTGCAGTAGTTTAGGATGTTACAGAGGTTTATCGATCGATAGC
TAGCAACTATGTTGACAGACAGATTCATCAGTTGTACATCCTATCTGATCTCCAGNTTAT
clustalw multiple alignements is not computed in this case