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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9328#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1309 fasta sequence
[GACCTTCCTGGTGGTGGATGTTCTAGCCAAGAACCCTAAAAAAAAAATTCCCCATCTCCTCCCAAT-CTG-ATTCCTCTCGAGACGGCGGATCCGAGCAATCTCTCCGGCGGAGGCGGCGGCGGCGGCGGCTGACGAGGGAAGATGAATCCTCTGACGCAGGTGAAGAGGACGCAGGTAATCAACCAGAAGGAAGCGCTTCTGGGCATCGGCGAGGACGGGTCGTGGCACGCCAAGTTCAAGGACTCCGCCTACGTCTTCGTCGGCGGCATCCCCTACGACCTCACCGAGGGCGACCTCCTCGCCGTGTTCGCGCAGTACGGCGAGGTGGTCGATGTGAACCTCGTGCGCGACAAGGGCACCGGAAAATCCAAGGGATTTGCGTTTCTTGCGTACGAGGACCAGAGGAGCACGATTCTTGCTGTTGATAATTTGAATGGAGCTAAAGTTCTTGGGAGGATTGTAAGAGTTGATCATGTGAGCAAATACAAGAAAAAGGAGGAGGAGGATGAGGAGGAGCTGCAGAAGAAGAGGGAGGCCC-GTGG-CG-TGTGCTACGCGTT-CCAGAAAGG-CGAATGCAACCGTGGAGCTT-CCTGCAGATATT-CCCATGATGAGCAGAGGAATG-CAAACACTGGTTGGGGTTCTAAGGAGGAGAGCAAAG-CAAGATGGGAGCATGACAGACACCATGAGCCACCGATGAGCCACAAGAAGTTCCCTTCGAGTGCTGGGGAACAAAGGTTCCCTGACAGAGCTAAAGAGGAGAACAAAT-CAACTGGCAGGGAAGGGCAGT-CCT-CAAGAT-CGGAGGCATACAAAGACCGTGATTCCAGGCTTAGGCATAGTGATAGAGGTTCAAAAGAT-CATGACAGGTATAGGCAT-GATAGA-T-CACCTGAGAGAT-CAAGAGGTGATAGGCAGAGAAACAA-TGACAGATA-TGCCCAAGGAAGAGAT-GAAAAATCAGAAAGGTACAGATCTGAAGTGAAACAT-GATGAAGGAGACCAGAAGCGATCAAGGCGGGACACTGATTCTAGTGGACATTATGAAAGGAGGGGTAACGAAGATTCAGAAAGGTACAGGAAATCACGGAGATAAAATTTGGATTTGTTGTTGCTTCAGAC---GTTGTTCTGATCTGTTCGATGTTTGTTCTTGTACGAGATGGATAAGATTTTTGTTTGATCCTTGGGTCTGATATTAGTCTAATAGATGCCATAGATTACATTTGAGATGATTTTGAACGCACTGGCCCATAGACCATAGACGAGTTTGCAGGATGTTAACTCAATACATTAATTAATCATTTGTGATCAATGTTAAAAAAAAA]
[+] EMBL AK071472 [GACCTTCCTGGTGGTGGATGTTCTAGCCAAGAACCCTAAAAAAAAAATTCCCCATCTCCTCCCAAT CTG ATTCCTCTCGAGACGGCGGATCCGAGCAATCTCTCCGGCGGAGGCGGCGGCGGCGGCGGCTGACGAGGGAAGATGAATCCTCTGACGCAGGTGAAGAGGACGCAGGTAATCAACCAGAAGGAAGCGCTTCTGGGCATCGGCGAGGACGGGTCGTGGCACGCCAAGTTCAAGGACTCCGCCTACGTCTTCGTCGGCGGCATCCCCTACGACCTCACCGAGGGCGACCTCCTCGCCGTGTTCGCGCAGTACGGCGAGGTGGTCGATGTGAACCTCGTGCGCGACAAGGGCACCGGAAAATCCAAGGGATTTGCGTTTCTTGCGTACGAGGACCAGAGGAGCACGATTCTTGCTGTTGATAATTTGAATGGAGCTAAAGTTCTTGGGAGGATTGTAAGAGTTGATCATGTGAGCAAATACAAGAAAAAGGAGGAGGAGGATGAGGAGGAGCTGCAGAAGAAGAGGGAGGCCC GTGG CG TGTGCTACGCGTT CCAGAAAGG CGAATGCAACCGTGGAGCTT CCTGCAGATATT CCCATGATGAGCAGAGGAATG CAAACACTGGTTGGGGTTCTAAGGAGGAGAGCAAAG CAAGATGGGAGCATGACAGACACCATGAGCCACCGATGAGCCACAAGAAGTTCCCTTCGAGTGCTGGGGAACAAAGGTTCCCTGACAGAGCTAAAGAGGAGAACAAAT CAACTGGCAGGGAAGGGCAGT CCT CAAGAT CGGAGGCATACAAAGACCATGATTCCAGGCTTAGGCATAGTGATAGAGGTTCAAAAGAT CATGACAGGTATAGGCAT GATAGA T CACCTGAGAGAT CAAGAGGTGATAGGCAGAGAAACAA TGACAGATA TGCCCAAGGAAGAGAT GAAAAATCAGAAAGGTACAGATCTGAAGTGAAACAT GATGAAGGAGACCAGAAGCGATCAAGGCGGGACACTGATTCTAGTGGACATTATGAAAGGAGGGGTAACGAAGATTCAGAAAGGTACAGGAAATCACGGAGATAAAATTTGGATTTGTTGTTGCTTCAGAC GTTGTTCTGATCTGTTCGATGTTTGTTCTTGTACGAGATGGATAAGATTTTTGTTTGATCCTTGGGTCTGATATTAGTCTAATAGATGCCATAGATTACATTTGA ]
[+] EMBL AU100833 [ CCAATACTGAATTCCTCTCGAGACGGCGGATCCGAGCAATCTCTCCGGCGGAGGCGGCGGCGGCGGCGGCTGACGAGGGAAGATGAATCCTCTGACGCAGGTGAAGAGGACGCAGGTAATCAACCAGAAGGAAGCGCTTCTGGGCATCGGCGAGGACGGGTCGTGGCACGCCAAGTTCAAGGACTCCGCCTACGTCTTCGTCGGCGGCATCCCCTACGACCTCACCGAGGAGGACCTCCTCGCCGTGTTCGCGCAGTACGGCGAGGTGGTCGATGTGAACCTCGTGCGCGACAAGGGCACCGGAAAATCCAAGGGATTTNCGTTTCTTGCGTACGAGGACCAGAGGAGCACGATTCTTGCTGTTGATAATTTGAATGGAGCTAAAGTTCTTGGGAGGATTGTAAGAGTTGATCATGTGAGC ]
[+] EMBL AU100834 [ gGGGAGCCCCTTTGGCCGTTGTTNTACGCGTTCCCAGAAAGGNCGAATGCAACCGTGGAGCTTCCCTGCAGATATTCCCCATGATGAGCAGAGG ATGCCAAACACTGGTTGGGGTTCTAAGGAGGAGAGCAAAGCCAAGATGGGAGCATGACAGACACCATGAGCCACCGATGAGCCACAAGAAGTTCCCTTCGAGTGCTGGGGAACAAAGGTTCCCTGACAGAGCTAAAGAGGAGANCAAAT CAACTGGCAGGGAAGGGCAGT CCT CAAGAT CGGAGGCATACAAAGACCGTGATTCCAGGCTTAGGCATAGTGATAGAGGTTCAAAAGAT CATGACAGGTATAGGCAT GATAGA T CACCTGAGAGAT CAAGAGGTGATAGGCAGAGAAACAA TGACAGATA TGCCCAAGGAAGAGAT GAAAAATCAGAAAGGTACAGATCTGAAGTGAAACAT GATGAAGGAGACCAGAAGCGATCAAGGCGGGACACTGATTCTAGTGGACATTATGAAAGGAGGGGTAACGAAGATTCAGAAAGGTACAGGAAATCACGGAGATAAAATTTGGATTTGTTGTTGCTTCAGAC GTTGTTCTGATCTGTTCGATGTTTGTTCTTGTACGAGATGGATAAGATTTTTGTTTGATCCTTGGGTCTGATATTAGTCTAATAGATGCCATAGATTACATTTGAaaaa ]
[+] EMBL OSC12192 [ GGGTTCTAAGGAGGAGAGCAAAG CAAGATGGGAGCATGACAGACACCATGAGCCACCGATGAGCCACAAGAAGTTCCCTTCGAGTGCTGGGGAACAAAGGTTCCCTGACAGAGCTAAAGAGGAGAACAAAT CAACTGGCAGGGAAGGGCAGT CCT CAAGAT CGGAGGCATACAAAGACCGTGATTCCAGGCTTAGGCATAGTGATAGAGGTTCAAAAGAT CATGACAGGTATAGGCAT GATAGATT CACCTGAGAGAT CAAGAGGTGATAGGCAGAGAAACAA TGACAGATATTNCCCAAGGAAGACAT GAAAAATCAG ]
[+] EMBL C98222 [ AAGNGGAGACCAAATCCAANTGGCAGGGAAGGCCANTCCCTCCAAGATCCGGAGGCATACAAAGCCCGTGATTCCAGGCTTAGGCATAGTGATAGAGGTTCAAAAGATCCATGCCAGGTATAGGCATGGATAGA TCCCCCTGGGAGATCCAAGAGNTGATAGGCAGAGAAACAATTGCCAGATA TNCCCAAGGAAGAGATGGAAAAATCAGAAAGGTACAGATCTGAAGTGAAACATGGATGAAGGAGNCCAGAAGCGATCAAGNCGGGACACTGATTCTAGTGGACATTATGAAAGGAGGGGTAACGAAGATTCAGAAAGGTACAGGAAATCACGGAGATAAAATTTGGATTTGTTGTTGCTTCAGAC GTTGTTCTGATCTGTTCGATGTTTGTTCTTGTACGAGATGGATAAGATTTTTGTTTGATCCTTGGGTCTGATATTAGTCTAATAGATGCCATAGATTACATTTGAGATGATTTTGAACGCACTGGCCCATAGACCATAGACGAGTTTGCAGGATGTTAACTCAATACATTAATTAATCATTTGTGATCAATGTTAAAAAAAAA]
[+] EMBL AF390017 [ GATAGAGGTTC AAAGAT CATGACAGGTATAGGCAT CATAGA T CACCTGAGAGAT CAAGAGGTGATAGGCAGAGAAACAA TGACAGATA TGCCCAAGGAAGAGAT GAAAAATCAGAAAGGTACAGATCTGAAGTGAAACAT GATGAAGGAGACCAGAAGCGATCAAGGCGGGACACTGATTCTAGTGGACATTATGAAAGGAGGGGTAACGAAGATTCAGAAAGGTACAGGAAATCACGGAGATAAAATTTGGATTTGTTGTTGCTTCAGACATTGTTGTTCTGATCTGTTCGATGTTTGTTCTTGTACGAGATGGATAAGATTTTTGTTTGATCCTTGGGTCTGATATTAGTCTAATAGATGCCATAGATTACATTTGAGATGATTTT ]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||