cluster # 9351

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Oryza sativa
cluster # 9351 cluster # 9351 Sequences # 6 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9351#0 length = 990 sequences # 6
consensusID : consensus_9351#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 990
fasta sequence
                              [CGGGGTAGCGCAAATGGGCGGCGGCGGCGGCGGGAGGCCGACGGCGAGCGGGGCGAACAGCAGCAGCAGCAGCGATGATGACGGGGACGCCGCCTGGAAGGCGGCCATCGAATCCATCGCCGCCGTGGGTTTCGGCCTGCCGCTGTCCAACGGCGCGGCGAAGGCCACCTCTGGCGGCGGCGGCGAGGCCAGCCACGGCGTGGAGCAGCAGCCGCCGCAGGAGGGGAAGGCGCAAGCACCTGGGCTTAAGCTTTACCAGATCAAGGTAAGGAACATGTTGGACAACATGTTAGAGAAAAACCTTGAAATAGTCAAAACTACCTGTTCGAACTTGGCCGATCCTATGGAAACAGATGGAGGGATAAAATTATTTAAAAAGGCTCCACCTGGCATCAGAATGGATGCCATGGATAAATACCATGTGCAACTGAAGAGACCAAGAATTCTGCCTGGAACAGATATCGATGAGAAATCCAAGAAGTTCAGGCATATGCTTAAGTCTGTTGCTGTTGATGGCAATGATATACTTGTTTCCGCAAAGAAATCATCAGAAAGATCATTGGCTAGATTGGAAGCAAGAGAAGCTGCAGCGAAGGCAGCAGCCAAGAGGGAAGAAGAAAGGGTGCGGGAACTGAAGAAGACTAGGGGAGAGAAATGGCTTCCTTCAATTGCTAGACAAATGAAGGAAGAAAAAGCTTGGGAGCAACGGAAGTGATGATGCCACCATCATATCAATAGGGGTACCTGTGCTAATCTCTGATGCCATCATCGGCACTTCGGCAGTGACCTTCTTCACTTTCTGTCTATGACAAGGGACAGTAGATAGATCATAGATTAATGGATGATTTTGCGTAGCTGATAATTCAGTTCTGGATGTCAGCATTGCTCTGATCCCTATATGGGCCTTCTTTGTAGACAATTTTGTATTGTAACATTCCAGGATCTTGTGTGATGAAAGTAGCGTATGTATGCATTATTTGGAAAAGAATC]

[+] EMBL AU095038             [CGGGGTAGCGCAAATGGGCGGCGGCGGCGGCGGGAGGCCGACGGCGAGCGGGGCGAACAGCAGCAGCAGCAGCGATGATGACGGGGACGCCGCCTGGAAG  NNCATTCGAATCCATCGCCGCCGTGGGTTTCGGCCTGCCGCTGTCCAACGGCGCGGCGAAGGCCACCTCTGGNGGCGGCGGCGAGGCCAGCCACGGCGTGGAGCAGCAGCCGCCGCAGGAGGGGAAGGCGCAA CACCTGGGCTTAAGCTTTACCAGATCAAGGTAAGGAACATGTTGGACAACATGTTAGAGAAAAACCTTGAAATAGTC AAACTACCTGTTCG ACTTGGCCGAT CTATGGAAACAGATGGAGGGATAAAATTATTTAAAA  GNT CACCTGGCATCAG ATGGATncat                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL AK069630             [                 GCGGCGGCGGCGGCGGGAGGCCGACGGCGAGCGGGGCGAACAGCAGCAGCAGCAGCGATGATGACGGGGACGCCGCCTGGAAGGCGGCCATCGAATCCATCGCCGCCGTGGGTTTCGGCCTGCCGCTGTCCAACGGCGCGGCGAAGGCCACCTCTGGCGGCGGCGGCGAGGCCAGCCACGGCGTGGAGCAGCAGCCGCCGCAGGAGGGGAAGGCGCAAGCACCTGGGCTTAAGCTTTACCAGATCAAGGTAAGGAACATGTTGGACAACATGTTAGAGAAAAACCTTGAAATAGTCAAAACTACCTGTTCGAACTTGGCCGATCCTATGGAAACAGATGGAGGGATAAAATTATTTAAAAAGGCTCCACCTGGCATCAGAATGGATGCCATGGATAAATACCATGTGCAACTGAAGAGACCAAGAATTCTGCCTGGAACAGATATCGATGAGAAATCCAAGAAGTTCAGGCATATGCTTAAGTCTGTTGCTGTTGATGGCAATGATATACTTGTTTCCGCAAAGAAATCATCAGAAAGATCATTGGCTAGATTGGAAGCAAGAGAAGCTGCAGCGAAGGCAGCAGCCAAGAGGGAAGAAGAAAGGGTGCGGGAACTGAAGAAGACTAGGGGAGAGAAATGGCTTCCTTCAATTGCTAGACAAATGAAGGAAGAAAAAGCTTGGGAGCAACGGAAGTGATGATGCCACCATCATATCAATAGGGGTACCTGTGCTAATCTCTGATGCCATCATCGGCACTTCGGCAGTGACCTTCTTCACTTTCTGTCTATGACAAGGGACAGTAGATAGATCATAGATTAATGGATGATTTTGCGTAGCTGATAATTCAGTTCTGGATGTCAGCATTGCTCTGATCCCTATATGGGCCTTCTTTGTAGACAATTTTGTATTGTAACATTCCAGGATCTTGTGTGATGAAAGTAGCGTATGTATGCATTATTTGGATATGAATC]
[+] EMBL AU166770             [                       GCGGCGGCGGGAGGCCGACGGCGAGCGGGGCGAACAGCAGCAGCAGCAGCGATGATGACGGGGACGCCGCCTGGAAGGCGGCCATCGAATCCATCGCCGCCGTGGGTTTCGGCCTGCCGCTGTCCAACGGCGCGGCGAAGGCCACCTCTGGCGGCGGCGGCGAGGCCAGCCACGGCGTGGAGCAGCAGCCGCCGCAGGAGGGGAAGGCGCAAGCACCTGGGCTTAAGCTTTACCAGATCAAGGTAAGGAACATGTTGGACAACATGTTAGAGAAAAACCTTGAAATAGTCAAAACTACCTGTTCGAACTTGGCCGATCCTATGGAAACAGATGGAGGGATAAAATTATTTAAAAAGGCTCCACCTGGCATCAGAATGGATGCCATGGATAAATACCATGTGCAACTGAAGAGAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL AK099768             [                                                                                                                   atagcacaCGCGAGATTCGGGGTAGCGCTGTCCAACGGCGCGGCGAAGGCCACCTCTGGCGGCGGCGGCGAGGCCAGCCACGGCGTGGAGCAGCAGCCGCCGCAGGAGGGGAAGGCGCAAGCACCTGGGCTTAAGCTTTACCAGATCAAGGTAAGGAACATGTTGGACAACATGTTAGAGAAAAACCTTGAAATAGTCAAAACTACCTGTTCGAACTTGGCCGATCCTATGGAAACAGATGGAGGGATAAAATTATTTAAAAAGGCTCCACCTGGCATCAGAATGGATGCCATGGATAAATACCATGTGCAACTGAAGAGACCAAGAATTCTGCCTGGAACAGATGTCGATGAGAAATCCAAGAAGTTCAGGCATATGCTTAAGTCTGTTGCTGTTGATGGCAATGATATACTTGTTTCCGCAAAGAAATCATCAGAAAGATCATTGGCTAGATTGGAAGCAAGAGAAGCTGCAGCGAAGGCAGCAGCCAAGAGGGAAGAAGAAAGGGTGCGGGAACTGAAGAAGACTAGGGGAGAGAAATGGCTTCCTTCAATTGCTAGACAAATGAAGGAAGAAAAAGCTTGGGAGCAACGGAAGTGATGATGCCACCATCATGTCAATAGGGGTACCTGTGCTAATCTCTGATGCCATCATCGGCACTTCGGCAGTGACCTTCTTCACTTTCTGTCTATGACAAGGGACAGTAGATAGATCATAGATTAATGGATGATTTTGCGTAGCTGATAATTCAGTTCTGGATGTCAGCATTGCTCTGATCCCTATATGGGCCTTCTTTGTAGACAATTTTGTATTGTAACATTCCAGGATCTTGTGTGATGAAAGTAGCGTATGTATGCATTA              ]
[+] EMBL AU030253             [                                                                                                                                                                                                                                                                                                                                                                                                                  TGCCATGGATAAATACCATGTGCAACTGAAGAGACCAAGAATTCTGCCTGGAACAGATATCGATGAGAAATCCAAGAAGTTCAGGCATATGCTTAAGTCTGTTGCTGTTGATGGCAATGATATACTTGTTTCCGCAAAGAAATCATCAGAAAGATCATTGGCTAGATTGGAAGCAAGAGAAGCTGCAGCGAAGGCAGCAGCCAAGAGGGAAGAAGAAAGGGTGCGGGAACTGAAGAAGACTAGGGGAGAGAAATGGCTTCCTTCAATTGCTAGACAAATGAAGGAAGAAAAAGCTTGGGAGCAACGGAAGTGATGATGCCACCATCATATCAATAGGGGTACCTGTGCTAATCTCTGATGCCATCATCGGCACTTCGGCAGTGACCTTCTTCACTTTCTGTCTATGACAAGGGACAGTAGATAGATCATAGATTAATGGATGATTTTGCGTAGCTGATAATTCAGTTCTGGATGTCAGCATTGCTCTGATCCCTATATGGGCCTTCTTTGTAGACAATTTTGTATTGTAACATTCCAGGATCTTGTGTGATGAAAGTAGCGTATGTATGNATTAaaaaaaaaa     ]
[+] EMBL AU166771             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ATCAGAAAGATCATTGGCTAGATTGGAAGCAAGAGAAGCTGCAGCGAAGGCAGCAGCCAAGAGGGAAGAAGAAAGGGTGCGGGAACTGAAGAAGACTAGGGGAGAGAAATGGCTTCCTTCAATTGCTAGACAAATGAAGGAAGAAAAAGCTTGGGAGCAACGGAAGTGATGATGCCACCATCATATCAATAGGGGNACCTGTGCTAATCTCTGATGCCATCATCGGCACTTCGGCAGTGACCTTCTTCACTTTCTGTCTATGACAAGGGACAGTAGATAGATCATAGATTAATGGATGATTTTGCGTAGCTGATAATTCAGTTCTGGATGTCAGCATTGCTCTGATCCCTATATGGGCCTTCTTTGTAGACAATTTTGTATTGTAACATTCCAGGATCTTGTGTGATGAAAGTAGCGTATGTATGCATTATTTGGAAAAa    ]




>consensus_9351#0
CGGGGTAGCGCAAATGGGCGGCGGCGGCGGCGGGAGGCCGACGGCGAGCGGGGCGAACAG
CAGCAGCAGCAGCGATGATGACGGGGACGCCGCCTGGAAGGCGGCCATCGAATCCATCGC
CGCCGTGGGTTTCGGCCTGCCGCTGTCCAACGGCGCGGCGAAGGCCACCTCTGGCGGCGG
CGGCGAGGCCAGCCACGGCGTGGAGCAGCAGCCGCCGCAGGAGGGGAAGGCGCAAGCACC
TGGGCTTAAGCTTTACCAGATCAAGGTAAGGAACATGTTGGACAACATGTTAGAGAAAAA
CCTTGAAATAGTCAAAACTACCTGTTCGAACTTGGCCGATCCTATGGAAACAGATGGAGG
GATAAAATTATTTAAAAAGGCTCCACCTGGCATCAGAATGGATGCCATGGATAAATACCA
TGTGCAACTGAAGAGACCAAGAATTCTGCCTGGAACAGATATCGATGAGAAATCCAAGAA
GTTCAGGCATATGCTTAAGTCTGTTGCTGTTGATGGCAATGATATACTTGTTTCCGCAAA
GAAATCATCAGAAAGATCATTGGCTAGATTGGAAGCAAGAGAAGCTGCAGCGAAGGCAGC
AGCCAAGAGGGAAGAAGAAAGGGTGCGGGAACTGAAGAAGACTAGGGGAGAGAAATGGCT
TCCTTCAATTGCTAGACAAATGAAGGAAGAAAAAGCTTGGGAGCAACGGAAGTGATGATG
CCACCATCATATCAATAGGGGTACCTGTGCTAATCTCTGATGCCATCATCGGCACTTCGG
CAGTGACCTTCTTCACTTTCTGTCTATGACAAGGGACAGTAGATAGATCATAGATTAATG
GATGATTTTGCGTAGCTGATAATTCAGTTCTGGATGTCAGCATTGCTCTGATCCCTATAT
GGGCCTTCTTTGTAGACAATTTTGTATTGTAACATTCCAGGATCTTGTGTGATGAAAGTA
GCGTATGTATGCATTATTTGGAAAAGAATC
clustalw multiple alignements is not computed in this case