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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9352#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1936 fasta sequence
[GGCGGCGGTGGGCGGCGGTGGGAGGGCGGAGATCGACACGTCGGCGCCGTTCGAGTCGGTGCGGGAGGCCGTCGACCGCTTCGGCGGCAGCGCCGCCTGGAGCTCCCACCTCATCAGGCGCATGTTCGCCCCTCCCAACCCCAAGGAGCAATCTGAAGAAAGTAAACAGCCTGTCGATATCAAAGAGCAGGCTGCACAACTAGAACATGATCTTATCATCAAAGAAAAGGAGACACTTGATGTGTTAAAGGAATTGGAATCTACCAAGAAAATCATAGCAGACTTAAAACAGAGAATACAGAAGGAATCAAATGAAACATCTCCTTCAGCTGTGAAGTCTGATGACCAAAGTGAAATTCCTATTACAGAATCTGAAGAGCAGAAACCTGAAAATGTTAACATTGATATGGATATGGAAGGCCTAGATGAACATCCACAACCGCTTTCAGGTTCAGTACTGTTAGAACTTGAGCAGGCAAAAGCAAACCTAAACAGAACTACAGGTGACCTGGCTGCAGTACGAGCTGCAATTGAATTACTGCACAATAGCATAGCAAAGGAGAAACTTTTGCTTGAGAGAAGCCGGGAAAAGCTTTCTTCCAATACTGCACTGGCTTCTTCTTTGGAAGATGAGCTGGATCAGACAACACAAAAGTTGCAAACCCTGAAAGATCTGCAGGCAAGACGTGAAGATCCCTCTGACATTTTCATTGAGATCAAGAAAATGGCATCTGAGGTACAGCAGCTCAGGGGCATGGCTAATGCTTCAAAGTCTGAGGCTATGATGCTGGCTGCAGAAATCGAGCAGACGAAGGCTAGCATTGGCACAGCAGAGATCAGATGCATTGCAGCCAAGAAGATGGAAGAAGCAGCTAGAGCAGCAGAAGCACTTGCACTTGCTGAGATCAAAGCTCTGTTGAGCAGTGAAAGTTCTTCTGAATGTGGCAGCTCTGTTTGTGATGGAGTGACTCTTTCAGCGGAAGAATATTTCACACTGTGCTCGAAGGCTCAAGAGGCTGATGAAAACTCGAGGAAGGAAGTAGAAGAGGCCATGCTGCAGGTAGATGTAGCTAACAGCTCAGAGACTGACTCAGTTAAAAAGTTAGATGATGCCCGATTAGAGGTTGAGGAATGCAAGAGGGCACTGCAAGAGGCCCTGAAGAGGGTGGAAGCTGCAAACCGTGGGAAACTTGCAGTTGATGAGATTCTTCGCAGATGGAAATCTGAGAATGGGCACAAGAGGCGCTCCATCGGTGGCTCTCCAAAGTTTAAGAATGCAGCTCAACGTCGTAAAGATTC-ACACAGCATGGATATCA-TCTCTGATGCTTCAACTAATTCCTGCAAGCAAACGTTGTCAATTGGGCAGATACTAAGCATGAAGC-TGATGGGGCCTGAAGGGTATGACAAAACCATCTGGGACGACAAAACGAGCGAGATGCCGAACGTTTCCCTTGGTCAGATTCTGAACAGGGGTAGAGTTTTGTCCAGAGAAGAGACGGCTGTTCGCAAGAGGGTCTCAGGGAAGAGGAAGAAATT-CGCATTGACTGGGCTCT-CAGTTCTATTGGCGAAGCAAGCCAAGAACAAGAAGAAGAGGGAAT-CCCTCTGATCT-GCT-ACAAGAGATCGATCTT-AGTTGTACTTTAGCTGTATTTATGTAGCTGGCTAGCTGCAGTTCAATCTGCCGTTCAGACAAGTAGCTAATTGTCGGACCCCTTTCAATCCTATGTAGTACAACGTTCTGTTTAGGTTAGTATGATGTATTATGCTGCAGTTCGCTCTGCTGATTAGGGACTATAGAGTCAAGTTTTAGTTGTGGTACTTGTATCATTTCGTAATCTAAATCGATGGATTTAATTATCCATCATTTCCACTGTGCCTCTTAAACCTTTCCATGTTGAGAACCTTTCTAATGTCTTTCTGTATTATAGCTTGAAAAAAA]
[+] EMBL AK073084 [GGCGGCGGTGGGCGGCGGTGGGAGGGCGGAGATCGACACGTCGGCGCCGTTCGAGTCGGTGCGGGAGGCCGTCGACCGCTTCGGCGGCAGCGCCGCCTGGAGCTCCCACCTCATCAGGCGCATGTTCGCCCCTCCCAACCCCAAGGAGCAATCTGAAGAAAGTAAACAGCCTGTCGATATCAAAGAGCAGGCTGCACAACTAGAACATGATCTTATCATCAAAGAAAAGGAGACACTTGATGTGTTAAAGGAATTGGAATCTACCAAGAAAATCATAGCAGACTTAAAACAGAGAATACAGAAGGAATCAAATGAAACATCTCCTTCAGCTGTGAAGTCTGATGACCAAAGTGAAATTCCTATTACAGAATCTGAAGAGCAGAAACCTGAAAATGTTAACATTGATATGGATATGGAAGGCCTAGATGAACATCCACAACCGCTTTCAGGTTCAGTACTGTTAGAACTTGAGCAGGCAAAAGCAAACCTAAACAGAACTACAGGTGACCTGGCTGCAGTACGAGCTGCAATTGAATTACTGCACAATAGCATAGCAAAGGAGAAACTTTTGCTTGAGAGAAGCCGGGAAAAGCTTTCTTCCAATACTGCACTGGCTTCTTCTTTGGAAGATGAGCTGGATCAGACAACACAAAAGTTGCAAACCCTGAAAGATCTGCAGGCAAGACGTGAAGATCCCTCTGACATTTTCATTGAGATCAAGAAAATGGCATCTGAGGTACAGCAGCTCAGGGGCATGGCTAATGCTTCAAAGTCTGAGGCTATGATGCTGGCTGCAGAAATCGAGCAGACGAAGGCTAGCATTGGCACAGCAGAGATCAGATGCATTGCAGCCAAGAAGATGGAAGAAGCAGCTAGAGCAGCAGAAGCACTTGCACTTGCTGAGATCAAAGCTCTGTTGAGCAGTGAAAGTTCTTCTGAATGTGGCAGCTCTGTTTGTGATGGAGTGACTCTTTCAGCGGAAGAATATTTCACACTGTGCTCGAAGGCTCAAGAGGCTGATGAAAACTCGAGGAAGGAAGTAGAAGAGGCCATGCTGCAGGTAGATGTAGCTAACAGCTCAGAGACTGACTCAGTTAAAAAGTTAGATGATGCCCGATTAGAGGTTGAGGAATGCAAGAGGGCACTGCAAGAGGCCCTGAAGAGGGTGGAAGCTGCAAACCGTGGGAAACTTGCAGTTGATGAGATTCTTCGCAGATGGAAATCTGAGAATGGGCACAAGAGGCGCTCCATCGGTGGCTCTCCAAAGTTTAAGAATGCAGCTCAACGTCGTAAAGATTC ACACAGCATGGATATCA TCTCTGATGCTTCAACTAATTCCTGCAAGCAAACGTTGTCAATTGGGCAGATACTAAGCATGAAGC TGATGGGGCCTGAAGGGTATGACAAAACCATCTGGGACGACAAAACGAGCGAGATGCCGAACGTTTCCCTTGGTCAGATTCTGAACAGGGGTAGAGTTTTGTCCAGAGAAGAGACGGCTGTTCGCAAGAGGGTCTCAGGGAAGAGGAAGAAATT CGCATTGACTGGGCTCT CAGTTCTATTGGCGAAGCAAGCCAAGAACAAGAAGAAGAGGGAAT CCCTCTGATCT GCT ACAAGAGATCGATCTT AGTTGTACTTTAGCTGTATTTATGTAGCTGGCTAGCTGCAGTTCAATCTGCCGTTCAGACAAGTAGCTAATTGTCGGACCCCTTTCAATCCTATGTAGTACAACGTTCTGTTTAGGTTAGTATGATGTATTATGCTGCAGTTCGCTCTGCTGATTAGGGACTATAGAGTCAAGTTTTAGTTGTGGTACTTGTATCATTTCGTAATCTAAATCGATGGATTTAATTATCCATCATTTCCAC ]
[+] EMBL AU172972 [ AGCGGAAGAATATTTCACACTGTGCTCGAAGGCTCAAGAGGCTGATGAAAACTCGAGGAAGAAAGTAGAAGAGGCCATGCTGCAGGTAGATGTAGCTAACAGCTCAGAGACTGACTCAGTTAAAAAGTTAGATGATGCCCGATTAGAGGTTGAGGAATGCAAGAGGGCACTGCAAGAGGCCCTGAAGAGGGTGGAAGCTGCAAACCGTGGGAAACTTGCAGTTGATGAGATTCTTCGCAGATGGAAATCTGAGAATGGGCACAAGAGGCGCTCCATCGGTGGCTCTCCAAAGTTTAAGAATGCAGCTCAACGTCGTAAAGATTC ACACAGCATGGATATCA TCTCTGATGCTTCAACTAATTCCTGCAAGCAAACGTTGTCAATTGGGCAGATACTAAGCATGAAGC TGATGGGGCCTGAAGGG ]
[+] EMBL AU030340 [ TGGCTCTCCAAAGTTTNAGAATGCAGCTCNACTTCGTANAGATTCNTCACAGCATGGATATCATTCTC NNTGCTTCAACTAANTCCTNCAAGCAAACGTTGTCAATTGGGCAG TACTANGCATGAAGCTTGATGGGGCCTGAAGGGCATGACAAAACCATCTGGGACGACNAANCGAGCGNTATGCCGAACGTTTCCCTTGGTCAGATTCTGAACAGGGNTANANTTTTGTCCAGAGANGNGACGGCTNTTCGCAAGANGNTCTCAGGGAANAGGNAGAAATTNCNCATTGACTGGGCTCTNCAGTTCTATTGGCGAAGCAAGCCAAGAACAAGAAGAAGNGGGAATGCCCTCTGATCTCGCTNTCAAGAGATCGATCTTAAGTTGTACTTTAGCTGTATTTATGTAGCTGGCTAGCTGCAGTTCAATCTGCCGTTCAGACAAGTAGCTAATTGTCGGACCCCTTTCAATCCTATGTAGTACAACGTTCTGTTTAGGTTAGTATGATGTATTATGCTGCAGTTCGCTCTGCTGATTAGGGNCTATAGAGTCAAGTTTTAGTTGTGGTACTTGTATCATTTCGTAATCTAAATCGATGGATTTAATTATCCATCATTTCCACTGTGCCTCTTAAACCTTTCCATGTTGAGAACCTTTCTAATGTCTTTCTGTATTATAGCTTGAAAAAAA]
[+] EMBL BE607410 [ AGTTGTACTTTAGCTGTATTTATGTAGCTGGCTAGCTGCAGTTCAATCTGCCGTTCAGACAAGTAGCTAATTGTCGGACCCCTTTCAATCCTATGTAGTACAACGTTCTGTTTAGGTTAGTATGATGTATTATGCTGCAGTTCGCTCTGCTGATTAGGGACTATAGAGTCAAGTTTTAGTTGTGGTACTTGTATCATTTCGTAATCTAAATCGATGGATTTAATTATCCATCAT ]
consensusID : consensus_9352#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 1823 fasta sequence
[TGTACCGCTCGACATGAACGGCGAGGAGGCTCCGGCCGGGAGCGGCGGCGGCGGCGGTGGAAGGGCGGAGATCGACACGTCGGCGCCCTTCGAGTCGGTGCGCGAAGCCGTCGACCACTTCGGCGGCGGCGCCGCCGCCGTCTGGAGCTCCTGCCTCGTCAACCGCATGCTCACTCCCCCGAAGGAACATGACCAGATGAATGGGCAGACCTTGCAGCTAGAGAAGGAGCTCATCATCAAGGAAAGCCAGACGCTTGATGTGCCCAAAGAATTAGAGTCCTCCAAAAGGATCATTTCGGACTTGAAGCTAAAAGTGCAGAATGATTCAGCCATCACTGGACACCCGGGCCAAACTGAAGCACCAGGTGCAGGGCCTGAGGAGAGGCGCTCTTCTGAAAATGTTGAAACTGATGGGGAATTGGGTGGCCTGGATTCACAGAATCTGCAGCCTCCAAGTTCAGTGCTAATGCAGCTTGAGCAGGCAAAAGCGTACTTGACCAGAACCACAGCTGATCTAGCCGAGATAAGAGCCTCCGTTGAGTCGCTGTGCAATGAGATAGCAAAAGAGAAAATCTTGGTGGAGAGAAGTCGAGAGAAGGTTTGCTCCAACACATCCTTGATCTCTTCGCTGGAGGGTGAATTGGATCGCACTACACATAAGCTGCAAACGCTGAATGATAGGCAAAGAAGGCGCGAGGATTCGTCACACATTCTGATGGAGATCAAGAAGGTGACATCAGAGATAGAGCAGCTCAAGAGCGCATCAAATGCATCGAAATCTGAAGCTACGATGTTGGCTGCCGAAATTGAGCAGACAAAGGCAAGCATTGCAACCGCTGAGGTGAGGTGTCTTGCAGCCAAGAAGATGGAAGATGCAGCAAGAGCAGCAGAAGCTCTTGCACTTGCTGAGATCAAGGCCCTACTTAGCGGTGAAGCTTCAGCTGGAGATCTCCAGGGTACTGATGGAGTGAACTTGTCCTTGGAAAAGTATTTTGAGCTTGCTTCAAAAGCTCAAGAGTGTGACGTCAGCTCGAGGAAGAAGATTGAAGCGGCAATGTTGCAGGTGGAAGAAGCCAACCGATCAAAATCCAACTCGCTCAACAAGCTGGAGGAAGCTAAATTGGAATTTGAGAAATGCAAAATTGCACTGCAGGATGCTCTGAAGAGGGCACACGCTGCCAATCGGGGGAAGCTCGCAGTGGAAGAGTCTGTTCGTAGATGGCTATCTGAGAGTGGCTACAAGAGGCACTCATTTCATGATTCTTCCAAGTTAAAAAATGCAGCAGATATCACTGACGTTTCAAAGAGCTTCTTGAAGCCAACACTGTCAATTGGGCAGATATTGAATCTGAAGCTAATGGGACCTGATGGGTATGACAAAAGCGTTTGGGATGATACAACTGAAGCTTCAAATGTTTCACTTGGTCAGATCCTGAACCGGAGGAATGCTGTTTTCTGTAACAGTGATATAACTTCTCAGAAGATATTGTCAGGAAAAAGGAAGAAATTTGCCTTCACAGGGCTTTCAGTTTTGTTGGCAAAACAAGCCAAGAGGCAAGAGCAAGAGAAATAGAGGATCAGATTAGAGCCTATCTGCCCAAGGTTTACCTAAGCCTGAAACAGTAGGTGATGAATGTTGTGACCACTATTTCCATGTTCATGTATGTTAGTTGGTTCTGGCCCTGCGTCCTCTGAATCTGTTATTGCCCTCTCACACATGATTTCTCTAGGATGACTGGTTGCGGATTAGGAACGTAAAACTGACGGTATTGCAGTCCTTTCTATAAATTTGCAACTATGCTTAACATGAGTGAGGCCACAAG]
[+] EMBL AK103884 [TGTACCGCTCGACATGAACGGCGAGGAGGCTCCGGCCGGGAGCGGCGGCGGCGGCGGTGGAAGGGCGGAGATCGACACGTCGGCGCCCTTCGAGTCGGTGCGCGAAGCCGTCGACCACTTCGGCGGCGGCGCCGCCGCCGTCTGGAGCTCCTGCCTCGTCAACCGCATGCTCACTCCCCCGAAGGAACATGACCAGATGAATGGGCAGACCTTGCAGCTAGAGAAGGAGCTCATCATCAAGGAAAGCCAGACGCTTGATGTGCCCAAAGAATTAGAGTCCTCCAAAAGGATCATTTCGGACTTGAAGCTAAAAGTGCAGAATGATTCAGCCATCACTGGACACCCGGGCCAAACTGAAGCACCAGGTGCAGGGCCTGAGGAGAGGCGCTCTTCTGAAAATGTTGAAACTGATGGGGAATTGGGTGGCCTGGATTCACAGAATCTGCAGCCTCCAAGTTCAGTGCTAATGCAGCTTGAGCAGGCAAAAGCGTACTTGACCAGAACCACAGCTGATCTAGCCGAGATAAGAGCCTCCGTTGAGTCGCTGTGCAATGAGATAGCAAAAGAGAAAATCTTGGTGGAGAGAAGTCGAGAGAAGGTTTGCTCCAACACATCCTTGATCTCTTCGCTGGAGGGTGAATTGGATCGCACTACACATAAGCTGCAAACGCTGAATGATAGGCAAAGAAGGCGCGAGGATTCGTCACACATTCTGATGGAGATCAAGAAGGTGACATCAGAGATAGAGCAGCTCAAGAGCGCATCAAATGCATCGAAATCTGAAGCTACGATGTTGGCTGCCGAAATTGAGCAGACAAAGGCAAGCATTGCAACCGCTGAGGTGAGGTGTCTTGCAGCCAAGAAGATGGAAGATGCAGCAAGAGCAGCAGAAGCTCTTGCACTTGCTGAGATCAAGGCCCTACTTAGCGGTGAAGCTTCAGCTGGAGATCTCCAGGGTACTGATGGAGTGAACTTGTCCTTGGAAAAGTATTTTGAGCTTGCTTCAAAAGCTCAAGAGTGTGACGTCAGCTCGAGGAAGAAGATTGAAGCGGCAATGTTGCAGGTGGAAGAAGCCAACCGATCAAAATCCAACTCGCTCAACAAGCTGGAGGAAGCTAAATTGGAATTTGAGAAATGCAAAATTGCACTGCAGGATGCTCTGAAGAGGGCACACGCTGCCAATCGGGGGAAGCTCGCAGTGGAAGAGTCTGTTCGTAGATGGCTATCTGAGAGTGGCTACAAGAGGCACTCATTTCATGATTCTTCCAAGTTAAAAAATGCAGCAGATATCACTGACGTTTCAAAGAGCTTCTTGAAGCCAACACTGTCAATTGGGCAGATATTGAATCTGAAGCTAATGGGACCTGATGGGTATGACAAAAGCGTTTGGGATGATACAACTGAAGCTTCAAATGTTTCACTTGGTCAGATCCTGAACCGGAGGAATGCTGTTTTCTGTAACAGTGATATAACTTCTCAGAAGATATTGTCAGGAAAAAGGAAGAAATTTGCCTTCACAGGGCTTTCAGTTTTGTTGGCAAAACAAGCCAAGAGGCAAGAGCAAGAGAAATAGAGGATCAGATTAGAGCCTATCTGCCCAAGGTTTACCTAAGCCTGAAACAGTAGGTGATGAATGTTGTGACCACTATTTCCATGTTCATGTATGTTAGTTGGTTCTGGCCCTGCGTCCTCTGAATCTGTTATTGCCCTCTCACACATGATTTCTCTAGGATGACTGGTTGCGGATTAGGAACGTAAAACTGACGGTATTGCAGTCCTTTCTATAAATTTGCAACTATGCTT ]
[+] EMBL AK106293 [ CATGAACGGCGAGGAGGCTCCGGCCGGGAGCGGCGGCGGCGGCGGTGGAAGGGCGGAGATCGACACGTCGGCGCCCTTCGAGTCGGTGCGCGAAGCCGTCGACCACTTCGGCGGCGGCGCCGCCGCCGTCTGGAGCTCCTGCCTCGTCAACCGCATGCTCACTCCCCCGAAGGAACATGACCAGATGAATGGGCAGACCTTGCAGCTAGAGAAGGAGCTCATCATCAAGGAAAGCCAGACGCTTGATGTGCTCAAAGAATTAGAGTCCTCCAAAAGGATCATTTCGGACTTGAAGCTAAAAGTGCAGAATGATTCAGCCATCACTGGACACCCGGGCCAAACTGAAGCACCAGGTGCAGGGCCTGAGGAGAGGCGCTCTTCTGAAAATGTTGAAACTGATGGGGAATTGGGTGGCCTGGATTCACAGAATCTGCAGCCTCCAAGTTCAGTGCTAATGCAGCTTGAGCAGGCAAAAGCGTACTTGACCAGAACCACAGCTGATCTAGCCGAGATAAGAGCCTCCGTTGAGTCGCTGTGCAATGAGATAGCAAAAGAGAAAATCTTGGTGGAGAGAAGTCGAGAGAAGGTTTGCTCCAACACATCCTTGATCTCTTCGCTGGAGGGTGAATTGGATCGCACTACACATAAGCTGCAAACGCTGAATGATAGGCAAAGAAGGCGCGAGGATTCGTCACACATTCTGATGGAGATCAAGAAGGTGACATCAGAGATAGAGCAGCTCAAGAGCGCATCAAATGCATCGAAATCTGAAGCTACGATGTTGGCTGCCGAAATTGAGCAGACAAAGGCAAGCATTGCAACCGCTGAGGTGAGGTGTCTTGCAGCCAAGAAGATGGAAGATGCAGCAAGAGCAGCAGAAGCTCTTGCACTTGCTGAGATCAAGGCCCTACTTAGCGGTGAAGCTTCAGCTGGAGATCTCCAGGGTACTGATGGAGTGAACTTGTCCTTGGAAAAGTATTTTGAGCTTGCTTCAAAAGCTCAAGAGTGTGACGTCAGCTCGAGGAAGAAGATTGAAGCGGCAATGTTGCAGGTGGAAGAAGCCAACCGATCAAAATCCAACTCGCTCAACAAGCTGGAGGAAGCTAAATTGGAATTTGAGAAATGCAAAATTGCACTGCAGGATGCTCTGAAGAGGGCACACGCTGCCAATCGGGGGAAGCTCGCAGTGGAAGAGTCTGTTCGTAGATGGCTATCTGAGAGTGGCTACAAGAGGCACTCATTTCATGATTCTTCCAAGTTAAAAAATGCAGCAGATATCACTGACGTTTCAAAGAGCTTCTTGAAGCCAACACTGTCAATTGGGCAGATATTGAATCTGAAGCTAATGGGACCTGATGGGTATGACAAAAGCGTTTGGGATGATACAACTGAAGCTTCAAATGTTTCACTTGGTCAGATCCTGAACCGGAGGAATGCTGTTTTCTGTAACAGTGATATAACTTCTCAGAAGATATTGTCAGGAAAAAGGAAGAAATTTGCCTTCACAGGGCTTTCAGTTTTGTTGGCAAAACAAGCCAAGAGGCAAGAGCAAGAGAAATAGAGGATCAGATTAGAGCCTATCTGCCCAAGGTTTACCTAAGCCTGAAACAGTAGGTGATGAATGTTGTGACCACTATTTCCATGTTCATGTATGTTAGTTGGTTCTGGCCCTGCGTCCTCTGAATCTGTTATTGCCCTCTCACACATGATTTCTCTAGGATGACTGGTTGCGGATTAGGAACGTAAAACTGACGGTATTGCAGTCCTTTCTATAAATTTGCAACTATGCTTAACATGAGTGAGGCCACAAG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9352#0 ----------------------------------------GGCGGCGGTGGGCGGCGGTG 20
consensus_9352#1 TGTACCGCTCGACATGAACGGCGAGGAGGCTCCGGCCGGGAGCGGCGGCGG-CGGCGGTG 59
******* ** ********
consensus_9352#0 GGAGGGCGGAGATCGACACGTCGGCGCCGTTCGAGTCGGTGCGGGAGGCCGTCGACCGCT 80
consensus_9352#1 GAAGGGCGGAGATCGACACGTCGGCGCCCTTCGAGTCGGTGCGCGAAGCCGTCGACCACT 119
* ************************** ************** ** ********** **
consensus_9352#0 TCGGCGGCAGCGCCGCC------TGGAGCTCCCACCTCATCAGGCGCATGTTCGCCCCTC 134
consensus_9352#1 TCGGCGGCGGCGCCGCCGCCGTCTGGAGCTCCTGCCTCGTCAACCGCATGCTCACTCC-- 177
******** ******** ********* **** *** ****** ** * **
consensus_9352#0 CCAACCCCAAGGAGCAATCTGAAGAAAGTAAACAGCCTGTCGATATCAAAGAGCAGGCTG 194
consensus_9352#1 ----CCCGAAGGAACA---------------------TGACCAGATGAATGGGCAGACCT 212
*** ***** ** ** * * ** ** * **** *
consensus_9352#0 CACAACTAGAACATGATCTTATCATCAAAGAAAAGGAGACACTTGATGTGTTAAAGGAAT 254
consensus_9352#1 TGCAGCTAGAGAAGGAGCTCATCATCAAGGAAAGCCAGACGCTTGATGTGCCCAAAGAAT 272
** ***** * ** ** ******** **** **** ********* ** ****
consensus_9352#0 TGGAATCTACCAAGAAAATCATAGCAGACTTAAAACAGAGAATACAGAAGGAATCAAATG 314
consensus_9352#1 TAGAGTCCTCCAAAAGGATCATTTCGGACTTGAAGCTAAAAGTGCAGAATGATTCAG--- 329
* ** ** **** * ***** * ***** ** * * * * ***** ** ***
consensus_9352#0 AAACATCTCCTTCAGCTGTGAAGTCTGATGACCAAAGTGAAATTCCTATTACAGAATCTG 374
consensus_9352#1 --------CCATCA-CTG-GACACCCG--GGCCAAACTGAAGCACCAGGTGCAGGGCCTG 377
** *** *** ** * * * ***** **** ** * *** ***
consensus_9352#0 AAGAGCAGAAACCT---GAAAATGTTAACATTGATATGGATATGGAAGGCCTAGATGAAC 431
consensus_9352#1 AGGAGAGGCGCTCTTCTGAAAATGTTGAAACTGATGGGGAATTGGGTGGCCTGGATTCAC 437
* *** * ** ********* * * **** *** *** ***** *** **
consensus_9352#0 ATCCACAACCGCTTTCAGGTTCAGTACTGTTAGAACTTGAGCAGGCAAAAGCAAACCTAA 491
consensus_9352#1 AGAATCTGCAGCCTCCAAGTTCAGTGCTAATGCAGCTTGAGCAGGCAAAAGCGTACTTGA 497
* * * ** * ** ******* ** * * ***************** ** * *
consensus_9352#0 ACAGAACTACAGGTGACCTGGCTGCAGTACGAGCTGCAATTGAATTACTGCACAATAGCA 551
consensus_9352#1 CCAGAACCACAGCTGATCTAGCCGAGATAAGAGCCTCCGTTGAGTCGCTGTGCAATGAGA 557
****** **** *** ** ** * ** **** * **** * *** **** *
consensus_9352#0 TAGCAAAGGAGAAACTTTTGCTTGAGAGAAGCCGGGAAAAGCTTTCTTCCAATACTGCAC 611
consensus_9352#1 TAGCAAAAGAGAAAATCTTGGTGGAGAGAAGTCGAGAGAAGGTTTGCTCCAACACATCCT 617
******* ****** * *** * ******** ** ** *** *** ***** ** *
consensus_9352#0 TGGCTTCTTCTTTGGAAGATGAGCTGGATCAGACAACACAAAAGTTGCAAACCCTGAAAG 671
consensus_9352#1 TGATCTCTTCGCTGGAGGGTGAATTGGATCGCACTACACATAAGCTGCAAACGCTGAATG 677
** ***** **** * *** ****** ** ***** *** ******* ***** *
consensus_9352#0 ATCTGCAGGCAAGACGTGAAGATCCCTCTGACATTTTCATTGAGATCAAGAAAATGGCAT 731
consensus_9352#1 ATAGGCAAAGAAGGCGCGAGGATTCGTCACACATTCTGATGGAGATCAAGAAGGTGACAT 737
** *** *** ** ** *** * ** ***** * ** *********** ** ***
consensus_9352#0 CTGAGGTACAGCAGCTCAGGGGCATGGCTAATGCTTCAAAGTCTGAGGCTATGATGCTGG 791
consensus_9352#1 CAGAGATAGAGCAGCTCAAGAGCGCATCAAATGCATCGAAATCTGAAGCTACGATGTTGG 797
* *** ** ********* * ** * ***** ** ** ***** **** **** ***
consensus_9352#0 CTGCAGAAATCGAGCAGACGAAGGCTAGCATTGGCACAGCAGAGATCAGATGCATTGCAG 851
consensus_9352#1 CTGCCGAAATTGAGCAGACAAAGGCAAGCATTGCAACCGCTGAGGTGAGGTGTCTTGCAG 857
**** ***** ******** ***** ******* ** ** *** * ** ** ******
consensus_9352#0 CCAAGAAGATGGAAGAAGCAGCTAGAGCAGCAGAAGCACTTGCACTTGCTGAGATCAAAG 911
consensus_9352#1 CCAAGAAGATGGAAGATGCAGCAAGAGCAGCAGAAGCTCTTGCACTTGCTGAGATCAAGG 917
**************** ***** ************** ******************** *
consensus_9352#0 CTCTGTTGAGCAGTGAAAGTTCTTCTGAATGTGGCAGCTCTGTTTGTGATGGAGTGACTC 971
consensus_9352#1 CCCTACTTAGCGGTGAAGCTTCAGCTGGA---GATCTCCAGGGTACTGATGGAGTGAACT 974
* ** * *** ***** *** *** * * * * * ***********
consensus_9352#0 TTTCAGCGGAAGAATATTTCACACTGTGCTCGAAGGCTCAAGAGGCTGATGAAAACTCGA 1031
consensus_9352#1 TGTCCTTGGAAAAGTATTTTGAGCTTGCTTCAAAAGCTCAAGAGTGTGACGTCAGCTCGA 1034
* ** **** * ***** ** ** ** ********* *** * * *****
consensus_9352#0 GGAAGGAAGTAGAAGAGGCCATGCTGCAGGTAGATGTAGCTAACAGCTCAGAGACTGACT 1091
consensus_9352#1 GGAAGAAGATTGAAGCGGCAATGTTGCAGGTGGAAGAAGCCAACCGATCAAAATCCAACT 1094
***** * * **** *** *** ******* ** * *** *** * *** * * ***
consensus_9352#0 CAGTTAAAAAGTTAGATGATGCCCGATTAGAGGTTGAGGAATGCAAGAGGGCACTGCAAG 1151
consensus_9352#1 CGCTCAACAAGCTGGAGGAAGCTAAATTGGAATTTGAGAAATGCAAAATTGCACTGCAGG 1154
* * ** *** * ** ** ** *** ** ***** ******* * ******** *
consensus_9352#0 AGGCCCTGAAGAGGGTGGAAGCTGCAAACCGTGGGAAACTTGCAGTTGATGAGATTCTTC 1211
consensus_9352#1 ATGCTCTGAAGAGGGCACACGCTGCCAATCGGGGGAAGCTCGCAGTGGAAGAGTCTGTTC 1214
* ** ********** * ***** ** ** ***** ** ***** ** *** * ***
consensus_9352#0 GCAGATGGAAATCTGAGAATGGGCACAAGAGGCGCTCCATCGGTGGCTCTCCAAAGTTTA 1271
consensus_9352#1 GTAGATGGCTATCTGAGAGTGGCTACAAGAGGCACTCATTTCATGATTCTTCCAAGTTAA 1274
* ****** ******** *** ********* *** * ** *** * ***** *
consensus_9352#0 AGAATGCAGCTCAACGTCGTAAAGATTCACACAGCATGGATATCATCTCTGATGCTTCAA 1331
consensus_9352#1 AAAATGCAGC---------------------------AGATATCA---CTGACGTTTCAA 1304
* ******** ******* **** * *****
consensus_9352#0 CTAATTCCTGCAAGCAAACGTTGTCAATTGGGCAGATACTAAGCATGAAGCTGATGGGGC 1391
consensus_9352#1 AGAGCTTCTTGAAGCCAACACTGTCAATTGGGCAGATATTGAATCTGAAGCTAATGGGAC 1364
* * ** **** *** ***************** * * ******* ***** *
consensus_9352#0 CTGAAGGGTATGACAAAACCATCTGGGACGACAAAACGAGCGAGATGCCGAACGTTTCCC 1451
consensus_9352#1 CTGATGGGTATGACAAAAGCGTTTGGGATGATACAAC---TGAAGCTTCAAATGTTTCAC 1421
**** ************* * * ***** ** * *** ** * ** ***** *
consensus_9352#0 TTGGTCAGATTCTGAAC---AGGGGTAGAGTTTTGTCCAGAGAAGAGACGGCTGTTCGCA 1508
consensus_9352#1 TTGGTCAGATCCTGAACCGGAGGAATGCTGTTTTCTGTAACAGTGATATAACTTCTCAGA 1481
********** ****** *** * ***** * * ** * ** ** *
consensus_9352#0 AGAGGGTCTCAGGGAAGAGGAAGAAATTCGCATTGACTGGGCTCTCAGTTCTATTGGCGA 1568
consensus_9352#1 AGATATTGTCAGGAAAAAGGAAGAAATTTGCCTTCACAGGGCTTTCAGTTTTGTTGGCAA 1541
*** * ***** ** *********** ** ** ** ***** ****** * ***** *
consensus_9352#0 AGCAAGCCAAGAACAAGAAGAAGAGGGAATCCCTCTGATCTG-CTACAAGAGATCGATCT 1627
consensus_9352#1 AACAAGCCAAGAGGCAAGAGCAAGAGAAATAGA--GGATCAGATTAGAGCCTATCTGCCC 1599
* ********** * ** * * *** **** * ** * *** *
consensus_9352#0 TAGTTGTACTTTAGCTGTATTTATGTAGCTGGCTAGCTGCAGTTCAATCTGCCGTTCAGA 1687
consensus_9352#1 AAGGTTTACCTAAGCCTGAAACA-GTAGGTGATGAAT----GTTGTGACCACTATTT--C 1652
** * *** * *** * * **** ** * *** * * **
consensus_9352#0 CAAGTAGCTAATTGTCGGACCCCTTTCAATCCTATGTAGTACAACGTTCTGTTTAGGTTA 1747
consensus_9352#1 CATGTTCATGTATGTTAG-TTGGTTCTGGCCCTGCGTCCTCTGAATCTGTTATTGCCCTC 1711
** ** * *** * ** *** ** * * * * ** *
consensus_9352#0 GTATG-ATGTATTATGCTGCAGTTCGCTCTGCTGATTAGGGACTATAGAGTCAAGTTTTA 1806
consensus_9352#1 TCACACATGATTTCTCTAGGATGACTGGTTGCGGATTAGGAACGTAAAACTGACGGTATT 1771
* *** ** * * * * *** ******* ** * * * * * * *
consensus_9352#0 GTTGTGGTACTTGTATCATTTCGTAATCTAAATCGATGGATTTAATTATCCATCATTTCC 1866
consensus_9352#1 GCAGT--CCTTTCTATAAATTTGCAACTATGCTTAACATGAGTGA--GGCCACAAG---- 1823
* ** ** *** * ** * ** * * * * *** *
consensus_9352#0 ACTGTGCCTCTTAAACCTTTCCATGTTGAGAACCTTTCTAATGTCTTTCTGTATTATAGC 1926
consensus_9352#1 ------------------------------------------------------------
consensus_9352#0 TTGAAAAAAA 1936
consensus_9352#1 ----------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||