cluster # 9378

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Oryza sativa
cluster # 9378 cluster # 9378 Sequences # 6 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9378#0 length = 1296 sequences # 6
consensusID : consensus_9378#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1296
fasta sequence
                              [ACAGTCGCAATCAGACATTCTCTCTTGTTGGTTAACTAAATAGCTTAATTAATTTGAGGAGTTTAGTCTCTGAAACATGGCGATGGCGACAGCAGCATGCAGAAGGCCTGCAGTGATGCTCATGGCGTTCGCCATGGCGGCTGCGGTGACGATGAGCTCCGTGCCGCCGGCGTCGGGGACGACGACGCTGCAGTACGACTTCTACTCGTCGTCGTGCCCGAAAGCCGAGGAGACGGTGAGGAACGTCGTCGAGCCGATGATCTTCAACGACCCCACCATGGGCGCCGCCTTCATCCGCCTCTTCTTCCACGACTGC-TTCGTCAGGGGTTGTGACGCGTCCATCCTGCTGGACCCGACGAGCAGAAACACGCAGCCGGAGAAGACGGCGATCCCGCTGCGCGGCTACGACGCCGTGAACAAGATCAAGGCCGCCGTCGAGGCCGTCTGCCCCGGCAAGGTCTCCTGCGCCGACATCCTCGCCTTCGCCGCGCGCGACTCCGCCGTCGTCAACGGCAACTTCGCCTTCGCCATGCCCTCCGGCCGCCGCGACGGCACCGCCTCCTCCGCCTCCGACGTCGCCCGGTTCATCCCGTCCCCGGCGTTCCACCTCCAGGACCTCGTCGACAGCTTCGCCGCCAAGGGCCTCACCGCCGACGACCTCGTCATCCTCTCCGGCGCCCACTCCTTCGGCCTCACCCACTGCGCCTTCGTCACCGGCAGGCTCTACCCCACCGTCGACCCCACCATGAACGCCACGTTCGCCGCGGCGCTCAAGAAGCTGTGCCCGCCGCCGGCGAGCGGCGGCGGCGGGAGGGCGGTGAGCAACAACCAGGTGACCGACCCCAACGTGCTGAGCAACCAGTACTTCAAGAACGTGGCCGCCGGGGAGGTGATGTTCACGTCGGACCAGACGCTGACGAGCCGCGACGACACCAAGGCGATGGTCGACGACAACGCCGCCAACCCGGTGGCGTGGATGGCGAGGTTCGCGGCGGCGATGGTGAAGATGGGCGGCGTCGAGGTGCTCACCGGGAACGCCGGCGAGGTCAGGAAGGTCTGCTTCGCCACCAACACGGCGAGCTGATAATTAAGCTACAAGTTCTCTTTCTCCAGCGATCGGCTGGATCATTACCACATAATATATATATTCCTTGTTATTTTGATCTCTTAATTTGTACTCCGTAGTTACCTGCATCGATTCTTGCTGTTGTAAAACTGAATTGTAATTCACTATCTTTGAATATTCAGTGATCAGTTACNGTGGTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AK109054             [ACAGTCGCAATCAGACATTCTCTCTTGTTGGTTAACTAAATAGCTTAATTAATTTGAGGAGTTTAGTCTCTGAAACATGGCGATGGCGACAGCAGCATGCAGAAGGCCTGCAGTGATGCTCATGGCGTTCGCCATGGCGGCTGCGGTGACGATGAGCTCCGTGCCGCCGGCGTCGGGGACGACGACGCTGCAGTACGACTTCTACTCGTCGTCGTGCCCGAAAGCCGAGGAGACGGTGAGGAACGTCGTCGAGCCGATGATCTTCAACGACCCCACCATGGGCGCCGCCTTCATCCGCCTCTTCTTCCACGACTGC TTCGTCAGGGGTTGTGACGCGTCCATCCTGCTGGACCCGACGAGCAGAAACACGCAGCCGGAGAAGACGGCGATCCCGCTGCGCGGCTACGACGCCGTGAACAAGATCAAGGCCGCCGTCGAGGCCGTCTGCCCCGGCAAGGTCTCCTGCGCCGACATCCTCGCCTTCGCCGCGCGCGACTCCGCCGTCGTCAACGGCAACTTCGCCTTCGCCATGCCCTCCGGCCGCCGCGACGGCACCGCCTCCTCCGCCTCCGACGTCGCCCGGTTCATCCCGTCCCCGGCGTTCCACCTCCAGGACCTCGTCGACAGCTTCGCCGCCAAGGGCCTCACCGCCGACGACCTCGTCATCCTCTCCGGCGCCCACTCCTTCGGCCTCACCCACTGCGCCTTCGTCACCGGCAGGCTCTACCCCACCGTCGACCCCACCATGAACGCCACGTTCGCCGCGGCGCTCAAGAAGCTGTGCCCGCCGCCGGCGAGCGGCGGCGGCGGGAGGGCGGTGAGCAACAACCAGGTGACCGACCCCAACGTGCTGAGCAACCAGTACTTCAAGAACGTGGCCGCCGGGGAGGTGATGTTCACGTCGGACCAGACGCTGACGAGCCGCGACGACACCAAGGCGATGGTCGACGACAACGCCGCCAACCCGGTGGCGTGGATGGCGAGGTTCGCGGCGGCGATGGTGAAGATGGGCGGCGTCGAGGTGCTCACCGGGAACGCCGGCGAGGTCAGGAAGGTCTGCTTCGCCACCAACACGGCGAGCTGATAATTAAGCTACAAGTTCTCTTTCTCCAGCGATCGGCTGGATCATTACCACATAATATATATATTCCTTGTTATTTTGATCTCTTAATTTGTACTCCGTAGTTACCTGCATCGATTCTTGCTGTTGTAAAACTGAATTGTAATTCACTATCTTTGAATATTCAGTGATCAGT                                        ]
[+] EMBL OSR22131A            [            AGACATTCTCTCTTGTTGGTTAACTAAATAGCTTAATTAATTTGAGGAGTTTAGTCTCTGAAACATGGCGATGGCGACAGCAGCATGCAGAAGGCCTGCAGTGATGCTCATGGCGTTCGCCATGGCGGCTGCGGTGACGATGAGCTCCGTGCCGCCGGCGTCGGGGACGACGACGCTGCAGTACGACTTCTACTCGTCGTCGTGCCCGAAAGCCGAGGAGACGGTGAGGAACGTCGTCGAGCCGATGATCTTCAACGACCCCACCATGGGCGCCGCCTTCATCCGCCTCTTCTTCCACGACTGC TTCGTCAGGGGTTGTGACGCGTCCATCCTGCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL OSR28461A            [            AGACATTCTCTCTTGTTGGTTAACTAAATAGCTTAATTAATTTGAGGAGTTTAGTCTCTGAAANATGGNGATGGCGACA NAGCATGCAGAAGGCCTGCAGTGATGCTCATGGNGTTCG CATGGCGGCTGCGGTGACGATGAGCTCCGTGCCGCCGGCGTTGGGGACGA GACGCTGCAGTACGACTTCTACTCGTCGTCGTGCCCGAAAGCCGAGGAGACGGTGAGGAACGTCGTCGAGCCGATGATCTTCAACGACCCCACCATGGGCGCCGNCTTCATCCGNCTCTTCTNTCACGACTGCTTTCGTCAGGGGTTGTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CA755883             [                    TCTCTTGTTGGTTAACTAAATAGCTTAATTAATTTGAGGAGTTTAGTCTCTGAAACATGGCGATGGCGACAGCAGCATGCAGAAGGCCTGCAGTGATGCTCATGGCGTTCGCCATGGCGGCTGCGGTGACGATGAGCTCCGTGCCGCCGGCGTCGGGGACGACGACGCTGCAGTACGACTTCTACTCGTCGTCGTGCCCGAAAGCCGAGGAGACGGTGAGGAACGTCGTCGAGCCGATGATCTTCAACGACCCCACCATGGGCGCCGCCTTCATCCGCCTCTTCTTCCACGACTGC TTCGTCAGGGGTTGTGACGCGTCCATCCTGCTGGACCCGACGAGCAGAAACACGCAGCCGGAGAAGACGGCGATCCCGCTGCGCGGCTACGACGCCGTGAACAAGATCAAGGCCGCCGTCGAGGCCGTCTGCCCCGGCNAGGTCTCCTGCGCCGACATCCTCGCCTTCGCCGCGCGCGACTCCGCCGTCGTCAACGGCNACTTCGCCTTCGCCATGCCCTCCGGNCGCCGCGACGGNACCGCCTCCTCCGCCTCCGACGTCGCCCGGNTCATCCCGTCCCCGGCGTTCCACCTCCAGGACCTCGTCGACAGCTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL C20498               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        AGCCGATGGTCNACGACAACGCCGCCAACCCGGTGCCGTGGATGNCGAGGTTCGCGGCGCCGATGNTGAAGATGGCCGCCGTCNAGGTGCTCACCGGNAACGCCGGCGAGGTCAGNAAGGTCCTCTTCGCCACCAACACGGCGAGNTGATAATTAAGCTACAAGTTCTCTTTCTCCAGCGATCGGCTGGATCATTACCACATAATATATATATTCCTTGTTATTTTGATCTCTTAATTTGTACTCCGTAGTTACCTGCATCGATTCTTGCTGTTGTAAAACTGAATTGTAATTCACTATCTTTGAATATTCAGTGATCAGTTACNGTGGTTAAAAA                         ]
[+] EMBL AU031857             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         TCGAGGTGNTCACCGGGAACGCCGGCGAGGTCAGGAAGGTCTG TTCGCCACCAACACGGCGNGCTGATAATTAAGCTACAAGTTCTCTTTCTCCNGCGATCGGCTGGATCATTACCACATAATATATATATTCCTTGTTATTTTGATCTCTTAATTTGTACTCCGTAGTTACCTGCATCGATTCTTGCTGTTGTAAAACTGAATTGTAATTCACTATCTTTGAATATTCAGTGATCAGTTACNGTGGTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]




>consensus_9378#0
ACAGTCGCAATCAGACATTCTCTCTTGTTGGTTAACTAAATAGCTTAATTAATTTGAGGA
GTTTAGTCTCTGAAACATGGCGATGGCGACAGCAGCATGCAGAAGGCCTGCAGTGATGCT
CATGGCGTTCGCCATGGCGGCTGCGGTGACGATGAGCTCCGTGCCGCCGGCGTCGGGGAC
GACGACGCTGCAGTACGACTTCTACTCGTCGTCGTGCCCGAAAGCCGAGGAGACGGTGAG
GAACGTCGTCGAGCCGATGATCTTCAACGACCCCACCATGGGCGCCGCCTTCATCCGCCT
CTTCTTCCACGACTGCTTCGTCAGGGGTTGTGACGCGTCCATCCTGCTGGACCCGACGAG
CAGAAACACGCAGCCGGAGAAGACGGCGATCCCGCTGCGCGGCTACGACGCCGTGAACAA
GATCAAGGCCGCCGTCGAGGCCGTCTGCCCCGGCAAGGTCTCCTGCGCCGACATCCTCGC
CTTCGCCGCGCGCGACTCCGCCGTCGTCAACGGCAACTTCGCCTTCGCCATGCCCTCCGG
CCGCCGCGACGGCACCGCCTCCTCCGCCTCCGACGTCGCCCGGTTCATCCCGTCCCCGGC
GTTCCACCTCCAGGACCTCGTCGACAGCTTCGCCGCCAAGGGCCTCACCGCCGACGACCT
CGTCATCCTCTCCGGCGCCCACTCCTTCGGCCTCACCCACTGCGCCTTCGTCACCGGCAG
GCTCTACCCCACCGTCGACCCCACCATGAACGCCACGTTCGCCGCGGCGCTCAAGAAGCT
GTGCCCGCCGCCGGCGAGCGGCGGCGGCGGGAGGGCGGTGAGCAACAACCAGGTGACCGA
CCCCAACGTGCTGAGCAACCAGTACTTCAAGAACGTGGCCGCCGGGGAGGTGATGTTCAC
GTCGGACCAGACGCTGACGAGCCGCGACGACACCAAGGCGATGGTCGACGACAACGCCGC
CAACCCGGTGGCGTGGATGGCGAGGTTCGCGGCGGCGATGGTGAAGATGGGCGGCGTCGA
GGTGCTCACCGGGAACGCCGGCGAGGTCAGGAAGGTCTGCTTCGCCACCAACACGGCGAG
CTGATAATTAAGCTACAAGTTCTCTTTCTCCAGCGATCGGCTGGATCATTACCACATAAT
ATATATATTCCTTGTTATTTTGATCTCTTAATTTGTACTCCGTAGTTACCTGCATCGATT
CTTGCTGTTGTAAAACTGAATTGTAATTCACTATCTTTGAATATTCAGTGATCAGTTACN
GTGGTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
clustalw multiple alignements is not computed in this case