cluster # 9411

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Oryza sativa
cluster # 9411 cluster # 9411 Sequences # 6 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9411#0 length = 1297 sequences # 6
consensusID : consensus_9411#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1297
fasta sequence
                              [TCTGTTTCCATCGCGAGCCACAGAGAGAGGGGGAGAGAGTGTGAGTGTGAGATCACAACTACTGTAGTGTTTGTGTGTGCGTGGGATGATGGGGACGGAGGCTACGGCGACGACGACGGTGAGCGGCGGCAGTGGCAGGGCGGCGCCGGCAGCGCTGTGCCTGCAGGCGGCGCGCGGCGCGTGGTCGCGGACGAGCAAGGTGCTCGACGTCGACGCCGCGTCGCCCACGGCGGCGCCG-TCGCTCGGGTCCTCCGTCGGCGTGCCGTTCCTCTGGGAGGAGGCGCCCGGGAGGCCTAAGGTGGTGGTGGTCGCGCCAGAACACTTCGCGCCGCCGCCGCCGCTCGCTCCGGCTGCCGACGAGAGGGCACCTGTTTCTCACGGCGGCGAGGCTGCGCCTGCGAGCGGTGGTGACCGCGGCGACGGTGACAAGGCGCGACACGTCGTCGTGCCGCTCAAGCTGCCGCCTCGGTTGCAGGCTGCAGCGGCAGCCGCGGCGGCGGCGGATTCGTCGCTCTCCCCCAACACCGTGCTGCACGGCCCCTACGGTGGAAACAAGCCGCCGAGGCCGCTGACGAGGAGCGGGAGCACGGCGAGCCACCGGAGGAAGCCAAGCGCCGTCGGGGTGAGCCTCTGGAGGAAGGCCACGGCGGCGGCGAGAGGCAAGAAACACGACTACGACGCGGCGGCTCTGGACGCGTCGTGCCGCTCTCCGGCGTCGTCGTCCTCCT-CCTCGTCATCCTCGTCGTCCTCGTCGATGTCCTACTTCGCCGACGACGACCACCGGAGGAAGGCTGACGGGCACGGCGACCCGGAGCCGGAGGCCGACGGCGAGGAGTGCGGCGCCAAGAGCACGGTGAGGATCACGCGGTTCAAGAGGAACAAGAGCCTCCCGAGCGTGAACACTTCGCACCTGTGGGCAAGCATCCGCAGAAGCGTCAAACAGATTACTCCATGGAGCTAGAAATCCTGCAAACTCCCACGGTACAGTGTCACAAACTGTACCCAGACATGCAGATCAGGAATGCTACATCTGCAAAATGTTGAGCTCTGGAAATCACAAGGACATCCGGATGACAAAGCATTCGCTGCTCAGTGTAAAAGAAGAATTTTAGTCTGTAAATCTGTAATGCAAGGATAAAGGGTTAAGTTGCGAAAAAAAAGAGAAAAAGGTCATGTACTGAGTGAAAGAATTTAGAGAGTTAGATGAACCCTCCGCTCGTTGCTTCGGGAATTTCTTTGTGTACCCTTTGTAAATACCCCGGGATGCTCAGGAAAACAAAATGTAATAAACCAAACA]

[+] EMBL AK071219             [TCTGTTTCCATCGCGAGCCACAGAGAGAGGGGGAGAGAGTGTGAGTGTGAGATCACAACTACTGTAGTGTTTGTGTGTGCGTGGGATGATGGGGACGGAGGCTACGGCGACGACGACGGTGAGCGGCGGCAGTGGCAGGGCGGCGCCGGCAGCGCTGTGCCTGCAGGCGGCGCGCGGCGCGTGGTCGCGGACGAGCAAGGTGCTCGACGTCGACGCCGCGTCGCCCACGGCGGCGCCG TCGCTCGGGTCCTCCGTCGGCGTGCCGTTCCTCTGGGAGGAGGCGCCCGGGAGGCCTAAGGTGGTGGTGGTCGCGCCAGAACACTTCGCGCCGCCGCCGCCGCTCGCTCCGGCTGCCGACGAGAGGGCACCTGTTTCTCACGGCGGCGAGGCTGCGCCTGCGAGCGGTGGTGACCGCGGCGACGGTGACAAGGCGCGACACGTCGTCGTGCCGCTCAAGCTGCCGCCTCGGTTGCAGGCTGCAGCGGCAGCCGCGGCGGCGGCGGATTCGTCGCTCTCCCCCAACACCGTGCTGCACGGCCCCTACGGTGGAAACAAGCCGCCGAGGCCGCTGACGAGGAGCGGGAGCACGGCGAGCCACCGGAGGAAGCCAAGCGCCGTCGGGGTGAGCCTCTGGAGGAAGGCCACGGCGGCGGCGAGAGGCAAGAAACACGACTACGACGCGGCGGCTCTGGACGCGTCGTGCCGCTCTCCGGCGTCGTCGTCCTCCT CCTCGTCATCCTCGTCGTCCTCGTCGATGTCCTACTTCGCCGACGACGACCACCGGAGGAAGGCTGACGGGCACGGCGACCCGGAGCCGGAGGCCGACGGCGAGGAGTGCGGCGCCAAGAGCACGGTGAGGATCACGCGGTTCAAGAGGAACAAGAGCCTCCCGAGCGTGAACACTTCGCACCTGTGGGCAAGCATCCGCAGAAGCGTCAAACAGATTACTCCATGGAGCTAGAAATCCTGCAAACTCCCACGGTACAGTGTCACAAACTGTACCCAGACATGCAGATCAGGAATGCTACATCTGCAAAATGTTGAGCTCTGGAAATCACAAGGACATCCGGATGACAAAGCATTCGCTGCTCAGTGTAAAAGAAGAATTTTAGTCTGTAAATCTGTAATGCAAGGATAAAGGGTTAAGTTGCGAAAAAAAAGAGAAAAAGGTCATGTACTGAGTGAAAGAATTTAGAGAGTTAGATGAACCCTCCGCTCGTTGCTTCGGGAATTTCTTTGTGTACCCTTTGTAAATACCCCGGGATGCTCAGGAAAACAAAATGTAATAAACCAAACA]
[+] EMBL AK106034             [ CTGTTTCCATCGCGAGCCACAGAGAGAGGGGGAGAGAGTGTGAGTGTGAGATCACAACTACTGTAGTGTTTGTGTGTGCGTGGGATGATGGGGACGGAGGCTACGGCGACGACGACGGTGAGCGGCGGCAGTGGCAGGGCGGCGCCGGCAGCGCTGTGCCTGCAGGCGGCGCGCGGCGCGTGGTCGCGGACGAGCAAGGTGCTCGACGTCGACGCCGCGTCGCCCACGGCGGCGCCG TCGCTCGGGTCCTCCGTCGGCGTGCCGTTCCTCTGGGAGGAGGCGCCCGGGAGGCCTAAGGTGGTGGTGGTCGCGCCAGAACACTTCGCGCCGCCGCCGCCGCTCGCTCCGGCTGCCGACGAGAGGGCACCTGTTTCTCACGGCGGCGAGGCTGCGCCTGCGAGCGGTGGTGACCGCGGCGACGGTGACAAGGCGCGACACGTCGTCGTGCCGCTCAAGCTGCCGCCTCGGTTGCAGGCTGCAGCGGCAGCCGCGGCGGCGGCGGATTCGTCGCTCTCCCCCAACACCGTGCTGCACGGCCCCTACGGTGGAAACAAGCCGCCGAGGCCGCTGACGAGGAGCGGGAGCACGGCGAGCCACCGGAGGAAGCCAAGCGCCGTCGGGGTGAGCCTCTGGAGGAAGGCCACGGCGGCGGCGAGAGGCAAGAAACACGACTACGACGCGGCGGCTCTGGACGCGTCGTGCCGCTCTCCGGCGTCGTCGTCCTCCT CCTCGTCATCCTCGTCGTCCTCGTCGATGTCCTACTTCGCCGACGACGACCACCGGAGGAAGGCTGACGGGCACGGCGACCCGGAGCCGGAGGCCGACGGCGAGGAGTGCGGCGCCAAGAGCACGGTGAGGATCACGCGGTTCAAGAGGAACAAGAGCCTCCCGAGCGTGAACACTTCGCACCTGTGGGCAAGCATCCGCAGAAGCGTCAAACAGATTACTCCATGGAGCTAGAAATCCTGCAAACTCCCACGGTACAGTGTCACAAACTGTACCCAGACATGCAGATCAGGAATGCTACATCTGCAAAATGTTGAGCTCTGGAAATCACAAGGACATCCGGATGACAAAGCATTCGCTGCTCAGTGTAAAAGAAGAATTTTAGTCTGTAAATCTGTAATGCAAGGATAAAGGG                                                                                                                                                           ]
[+] EMBL AU056733             [                      GAGAGAGGGGGAGAGAGTGTGAGTGTGAGATCACAACTACTGTAGTGTTTGTGTGTGCGTGGGATGATGGGGACGGAGGCTACGGCGACGACGACGGTGAGCGGCGGCAGTGGCAGGGCGGCGCCGGCAGCGCTGTGCCTGCAGGCGGCGCGCGGCGCGTGGTCGCGGACGAGCAAGGTGCTCGACGTCGACGCCGCGTCGCCCACGGCGGCGCCGTTCGCTCGGGTCCTCCGTCGGCGTNCCGTTCCTCTTGGAAGAAGCGCCCNGGAAGCCTAANGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CB621390             [                                GAGACAGTGTGAGTGTGAGATCACAACTACTGTAGTGTTTGTGTGTGCGTGGGATGATGGGGACGGAGGCTACGGCGACGACGACGGTGAGCGGCGGCAGTGGTAGGGCGGCACCGGCAGCGCTGTGCCTGCAGGCGGCGCGCGGCGCGTGGTCGCGGACGAGCAAGGTGCTCGACGTCGACGCCGCGTCGCCCACGGCGGCGCCG TTGCTCGGGTCCTCCGTCGGCGTGCCGTTCCTCTGGGAGGAGGCGCCCGGGAGGCCTAAGGTGGTGGTGGTCGCGCCAGAACACTTCGCGCCGCCGCCGCCGCTCGCTCCGGCTGCCGACGAGAGGGCACCTGTTTCTCACGGCGGCGAGGCTGCGCCTGCGAGCGGTGGTGACCGCGGCGACGGTGACAAGGCGCGACACGTCGTCGTGCCGCTCAAGCTGCCGCCTCGGTTGCAGGCTGCAGCGGCAGCCGCGGCGGCGGCGGATTCGTCGCTCTCCCCCAACACCGTGCTGCACGGCCCCTACGGTGGAAACAAGCCGCCGAGGCCGCTGACGAGGAGCGGGAGCACGGCGAGCCACCGGAGGAAGCCAAGCGCCGTCGGGGTGAGCCTCTGGAGGAAGGCCACGGCGGCGGCGAGAGGCAAGAAACACGACTACGACGCGGCGGCTCTGGACGCGTCGTGCCGCTCTCCGGCGTCGTCGTCCTCCT CCTCGTCATCCTCGTCGTCCTCGTCGATGTCCTACTTCGCCGACGAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CB621391             [                                                                                                                                                                                                                                                                                                                                                                                                                         TGACCGCGGCGACGGTGACAAGGCGCGACACGTCGTCGTGCCGCTCAAGCTGCCGCCTCGGTTGCAGGCTGCAGCGGCAGCCGCGGCGGCGGCGGATTCGTCGCTCTCCCCCAACACCGTGCTGCACGGCCCCTACGGTGGAAACAAGCCGCCGAGGCCGCTGACGAGGAGCGGGAGCACGGCGAGCCACCGGAGGAAGCCAAGCGCCGTCGGGGTGAGCCTCTGGAGGAAGGCCACGGCGGCGGCGAGAGGCAAGAAACACGACTACGACGCGGCGGCTCTGGACGCGTCGTGCCGCTCTCCGGCGTCGTCGTCCTCCT CCTCGTCATCCTCGTCGTCCTCGTCGATGTCCTACTTCGCCGACGACGACCACCGGAGGAAGGCTGACGGGCACGGCGACCCGGAGCCGGAGGCCGACGGCGAGGAGTGCGGCGCCAAGAGCACGGTGAGGATCACGCGGTTCAAGAGGAACAAGAGCCTCCCGAGCGTGAACACTTCGCACCTGTGGGCAAGCATCCGCAGAAGCGTCAAACAGATTACTCCATGGAGCTAGAAATCCTGCAAACTCCCACGGTACAGTGTCACAAACTGTACCCAGACATGCAGATCAGGAATGCTACATCTGCAAAATGTTGAGCTCTGGAAATCACAAGGACATCCGGATGACAAAGCATTCGCTGCTCAGTGTAAAAGAAGAATTTTAGTCTGTAAATCTGTAATGCAAGGATAAAGGGT                                                                                                                                                          ]
[+] EMBL AU056734             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          CGTCGTCGTCCTCCTCCCTCGTCATCCTCGTCGTCCTCGTCGATGTCCTACTTCGCCGACGACGACCACCGGAGGAAGGCTGACGGGCACGGCGACCCGGAGCCGGAGGCCGACGGCGAGGAGTGCGGCGCCAAGAGCACGGTGAGGATCACGCGGTTCAAGAGGAACAAGAGCCTCCCGAGCGTGAACACTTCGCACCTGTGGGCAAGCATCCGCAGAAGCGTCAAACAGATTACTCCATGGAGCTAGAAATCCTGCAAACTCCCACGGTACAGTGTCACAAACTGTACCCAGACATGCAGATCAGGAATGCTACATCTGCAAAATGTTGAGCTCTGGAAATCACAAGGACATCCGGATGACAAAGCATTCGCTGCTCAGTGTAAAAGAAGAATTTTAGTCTGTAAATCTGTAATGCAAGGATAAAGGGTTAAGTTGCGAAAAAA                                                                                                                                           ]




>consensus_9411#0
TCTGTTTCCATCGCGAGCCACAGAGAGAGGGGGAGAGAGTGTGAGTGTGAGATCACAACT
ACTGTAGTGTTTGTGTGTGCGTGGGATGATGGGGACGGAGGCTACGGCGACGACGACGGT
GAGCGGCGGCAGTGGCAGGGCGGCGCCGGCAGCGCTGTGCCTGCAGGCGGCGCGCGGCGC
GTGGTCGCGGACGAGCAAGGTGCTCGACGTCGACGCCGCGTCGCCCACGGCGGCGCCGTC
GCTCGGGTCCTCCGTCGGCGTGCCGTTCCTCTGGGAGGAGGCGCCCGGGAGGCCTAAGGT
GGTGGTGGTCGCGCCAGAACACTTCGCGCCGCCGCCGCCGCTCGCTCCGGCTGCCGACGA
GAGGGCACCTGTTTCTCACGGCGGCGAGGCTGCGCCTGCGAGCGGTGGTGACCGCGGCGA
CGGTGACAAGGCGCGACACGTCGTCGTGCCGCTCAAGCTGCCGCCTCGGTTGCAGGCTGC
AGCGGCAGCCGCGGCGGCGGCGGATTCGTCGCTCTCCCCCAACACCGTGCTGCACGGCCC
CTACGGTGGAAACAAGCCGCCGAGGCCGCTGACGAGGAGCGGGAGCACGGCGAGCCACCG
GAGGAAGCCAAGCGCCGTCGGGGTGAGCCTCTGGAGGAAGGCCACGGCGGCGGCGAGAGG
CAAGAAACACGACTACGACGCGGCGGCTCTGGACGCGTCGTGCCGCTCTCCGGCGTCGTC
GTCCTCCTCCTCGTCATCCTCGTCGTCCTCGTCGATGTCCTACTTCGCCGACGACGACCA
CCGGAGGAAGGCTGACGGGCACGGCGACCCGGAGCCGGAGGCCGACGGCGAGGAGTGCGG
CGCCAAGAGCACGGTGAGGATCACGCGGTTCAAGAGGAACAAGAGCCTCCCGAGCGTGAA
CACTTCGCACCTGTGGGCAAGCATCCGCAGAAGCGTCAAACAGATTACTCCATGGAGCTA
GAAATCCTGCAAACTCCCACGGTACAGTGTCACAAACTGTACCCAGACATGCAGATCAGG
AATGCTACATCTGCAAAATGTTGAGCTCTGGAAATCACAAGGACATCCGGATGACAAAGC
ATTCGCTGCTCAGTGTAAAAGAAGAATTTTAGTCTGTAAATCTGTAATGCAAGGATAAAG
GGTTAAGTTGCGAAAAAAAAGAGAAAAAGGTCATGTACTGAGTGAAAGAATTTAGAGAGT
TAGATGAACCCTCCGCTCGTTGCTTCGGGAATTTCTTTGTGTACCCTTTGTAAATACCCC
GGGATGCTCAGGAAAACAAAATGTAATAAACCAAACA
clustalw multiple alignements is not computed in this case