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Oryza sativa
cluster # 9428 cluster # 9428       Sequences # 6       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9428#0 length = 2409 sequences # 5  
consensus_9428#1 length = 136 sequences # 1  

consensusID : consensus_9428#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 2409
fasta sequence
                              [GCGGCGCCGGCGAGTGGCTCCCCCGAGCGCGCCTCCCTTCCGCGAGCCCTCCTTCCACCACCGAAGCACGACCTCCACCTCGCTCTCCGCTCTACTGGACTGTAGCCGAGTGGAGATTGGCGGCAAGCCCAACCATGCTCGGATTATTCTGAGAGTGAGTGTGTTTGTTCATCCAGTTCTCTTCATCCAATCCAAATCTTTCTTTCTAGGAGGGAGGGAGTGCCCAGTTCGCCGTGGATTTCTTTTCTTGCGTCAGTGATACTGATACAGTGATACATACAGTTTGTTCTCCAAAAAGTTTTGGGGGATTCAGCTGAATCTCCATGCTCCGGTCAGTGCCAGCCGCTCGCCACAGGTGGCTTCCATGGAATGGCCTTGCCAGGGGCTCATCCAGAACCCCACATTGTCATGCTGCTGCTGCTGCTGTCAGTTCTTGGCATGTCCATGATTCATCATCACCATGTGCGTCGAGCTGGAGCTGGGCCAGTCAGGTTGGTGACAGGATTCAGCTGCGGCCATTCTCGGCCGCTCCGGCGATCGTCGGGGATGGGATTGAGGATGTGGATGATCGGAGGGTCAAGCAGATGCGGAGGAGGCGCGACGCCCGCATCGCGCAGAAGGCATTCATGGAGTACCTCCATGTCACGCGTGGGATTTGCTTCAGTGATGCCGAGCACATGAGCAAGCGCTCGCCGATCTTCATCAGCAAGCTGCTGGAGAAGGTGAAGGATGCGGCGAAGGAGCCCACGGAGGAGGGGGAGGAGGTGCCCTTCAGGTCGAAGGTGAAGAAGAGGGAGATGAGGGATGAGAGGGTCAGCAAGGCGTTGGTGCGGCTGTTCAACTTCCACCCTATCAACGAGTTCGAGCCGTTCTTCGAGAGTATCGGCATCGCGCCGGGCGAGTATGAGCCATTGTTGCCTCGTGATCTCATGTTTCTCAATGATGATGAGACGATGCTCGACAATTTCCGGGTGCTTTGCAACTATGGCATCGCGCGCACCAAGATAGGGAGGATATACAGGGATGCTACCGAAGTGTTTAGTTTTGGCCATGGAGTTCTTGCGTCGAAGCTGAAGGCCCTTGAGGATCAAGGGTTGAGTAAGACCAGTGTGATCAAGCTAGTGATGTCGAGCCCTGTCATACTGGTCCGTGATCCAAATGTGGAATTGAAGATTCTGCGCTGGCTAGATGATGTTGGAATTCAGAGAGACTGGCTTGGCCGATTCTTATCTGTAAAGAAGTCTTATAACTGGGGAAAGATGGTCCAAGTCCCTCAGTTCTTCAGTGATTTAGGATTCACTAATGAAGGTATTGGCAAATTGGTCAGACAGAATCCCGATTTCTTGTTTAGTGGTTCAGGAAAGATGCTGTTCTCGGCAGTCCTCGTCATGCTAAAAGCTGGGTTTGGAAAAAAGGAATTGGTTGATCTTTTTCTGAATTTCCCAAATTTGTCAGTCGACAATTTCACGAGGAACCTGCGAAGGGGCATATTCTTCTTAGCTGAGATTGGTGTTAGTGAAGAGGACATTAAGAAATTTGTGGTGTCTAACGGTTCAATACTTGGTTC-CGTCCAATTGAAGAAACCAAACAGCATTATGACACATCTCAGTGTAGGGAAGAAGCGCCTTTGCAGGATGGTAATGGAGGATCCACAACTGTTGATGAAATTCTCATTAGGGGCAAAGGTCAGCCGCATA-CCGAAA-GTTGATCTCCAT-GAAGCATCCTTCAAGGAGAAGGTGAAATTTTTACAGAA-CTTAGGATTTAT-GGAAGGAT-CCGAACGAATGACGA-GGGGACTCAAAGCA-TTTCGTGGTAAAGGTGACGAGCTAAAAGA-TCGCTACGACTTCTT-GGTCAAGACCGG-TTTGGACCCGGAACATGTGGTGCAGATGATCACTATGGCTCCACATGTTCTGAATCAGAAGATCCATGTCCTTGAATCCAAGATATCCTTCCTTGTAAATGATAT-GGGATATCCTCTGAGTACCCT-GGTAATTTTCCCTTCATTCCTCTCGTTTACCGTGGAGAGAACCAAGCTTAGG-TTTTTGATGTACAATTGGTTGTTGGAGAAAGGAGTGATTGCTACTGGACTAGCTCTTAGCACTCTCCTAGCCACTGCAGACAAACATTTCGTAAAACGTTATGTAGTAAGGCACCCCATGGGTTTAGAAGTCTGGGAGAAATTCAAGACAGAGGTAGCTTCAACAAAAAACAACACACCCTGTACTCCAGATGATTAGCCTGATATGTTATATTTTTCTTTCTCATCAACTTACTTTTTTGCTGGCTAAGCAACTCGTTTTGCTGCACACCAATAGGTTGCCCCAACTTTGTCTGGAGTTTTTCTCCCTCTCTTAACTTTAGGTGTGTATATCTCTGTTAATGATTTTGTCCACAGAGAAGATTGTTGATCTT]

[+] EMBL AK063992             [GCGGCGCCGGCGAGTGGCTCCCCCGAGCGCGCCTCCCTTCCGCGAGCCCTCCTTCCACCACCGAAGCACGACCTCCACCTCGCTCTCCGCTCTACTGGACTGTAGCCGAGTGGAGATTGGCGGCAAGCCCAACCATGCTCGGATTATTCTGAGAGTGAGTGTGTTTGTTCATCCAGTTCTCTTCATCCAATCCAAATCTTTCTTTCTAGGAGGGAGGGAGTGCCCAGTTCGCCGTGGATTTCTTTTCTTGCGTCAGTGATACTGATACAGTGATACATACAGTTTGTTCTCCAAAAAGTTTTGGGGGATTCAGCTGAATCTCCATGCTCCGGTCAGTGCCAGCCGCTCGCCACAGGTGGCTTCCATGGAATGGCCTTGCCAGGGGCTCATCCAGAACCCCACATTGTCATGCTGCTGCTGCTGCTGTCAGTTCTTGGCATGTCCATGATTCATCATCACCATGTGCGTCGAGCTGGAGCTGGGCCAGTCAGGTTGGTGACAGGATTCAGCTGCGGCCATTCTCGGCCGCTCCGGCGATCGTCGGGGATGGGATTGAGGATGTGGATGATCGGAGGGTCAAGCAGATGCGGAGGAGGCGCGACGCCCGCATCGCGCAGAAGGCATTCATGGAGTACCTCCATGTCACGCGTGGGATTTGCTTCAGTGATGCCGAGCACATGAGCAAGCGCTCGCCGATCTTCATCAGCAAGCTGCTGGAGAAGGTGAAGGATGCGGCGAAGGAGCCCACGGAGGAGGGGGAGGAGGTGCCCTTCAGGTCGAAGGTGAAGAAGAGGGAGATGAGGGATGAGAGGGTCAGCAAGGCGTTGGTGCGGCTGTTCAACTTCCACCCTATCAACGAGTTCGAGCCGTTCTTCGAGAGTATCGGCATCGCGCCGGGCGAGTATGAGCCATTGTTGCCTCGTGATCTCATGTTTCTCAATGATGATGAGACGATGCTCGACAATTTCCGGGTGCTTTGCAACTATGGCATCGCGCGCACCAAGATAGGGAGGATATACAGGGATGCTACCGAAGTGTTTAGTTTTGGCCATGGAGTTCTTGCGTCGAAGCTGAAGGCCCTTGAGGATCAAGGGTTGAGTAAGACCAGTGTGATCAAGCTAGTGATGTCGAGCCCTGTCATACTGGTCCGTGATCCAAATGTGGAATTGAAGATTCTGCGCTGGCTAGATGATGTTGGAATTCAGAGAGACTGGCTTGGCCGATTCTTATCTGTAAAGAAGTCTTATAACTGGGGAAAGATGGTCCAAGTCCCTCAGTTCTTCAGTGATTTAGGATTCACTAATGAAGGTATTGGCAAATTGGTCAGACAGAATCCCGATTTCTTGTTTAGTGGTTCAGGAAAGATGCTGTTCTCGGCAGTCCTCGTCATGCTAAAAGCTGGGTTTGGAAAAAAGGAATTGGTTGATCTTTTTCTGAATTTCCCAAATTTGTCAGTCGACAATTTCACGAGGAACCTGCGAAGGGGCATATTCTTCTTAGCTGAGATTGGTGTTAGTGAAGAGGACATTAAGAAATTTGTGGTGTCTAACGGTTCAATACTTGGTTC CGTCCAATTGAAGAAACCAAACAGCATTATGACACATCTCAGTGTAGGGAAGAAGCGCCTTTGCAGGATGGTAATGGAGGATCCACAACTGTTGATGAAATTCTCATTAGGGGCAAAGGTCAGCCGCATA CCGAAA GTTGATCTCCAT GAAGCATCCTTCAAGGAGAAGGTGAAATTTTTACAGAA CTTAGGATTTAT GGAAGGAT CCGAACGAATGACGA GGGGACTCAAAGCA TTTCGTGGTAAAGGTGACGAGCTAAAAGA TCGCTACGACTTCTT GGTCAAGACCGG TTTGGACCCGGAACATGTGGTGCAGATGATCACTATGGCTCCACATGTTCTGAATCAGAAGATCCATGTCCTTGAATCCAAGATATCCTTCCTTGTAAATGATAT GGGATATCCTCTGAGTACCCT GGTAATTTTCCCTTCATTCCTCTCGTTTACCGTGGAGAGAACCAAGCTTAGG TTTTTGATGTACAATTGGTTGTTGGAGAAAGGAGTGATTGCTACTGGACTAGCTCTTAGCACTCTCCTAGCCACTGCAGACAAACATTTCGTAAAACGTTATGTAGTAAGGCACCCCATGGGTTTAGAAGTCTGGGAGAAATTCAAGACAGAGGTAGCTTCAACAAAAAACAACACACCCTGTACTCCAGATGATTAGCCTGATATGTTATATTTTTCTTTCTCATCAACTTACTTTTTTGCTGGCTAAGCAACTCGTTTTGCTGCACACCAATAGGTTGCCCCAACTTTGTCTGGAGTTTTTCTCCCTCTCTTAACTTTAGGTGTGTATATCTCTGTTAATGATTTTGTCCACAGAGAAGATTGTTGATCTT]
[+] EMBL AK102043             [                   CCCCCGAGCGCGCCTCCCTTCCGCGAGCCCTCCTTCCACCACCGAAGCACGACCTCCACCTCGCTCTCCGCTCTACTGGACTGTAGCCGAGTGGAGATTGGCGGCAAGCCCAACCATGCTCGGATTATTCTGAGAGTGAGTGTGTTTGTTCATCCAGTTCTCTTCATCCAATCCAAATCTTTCTTTCTAGGAGGGAGGGAGTGCCCAGTTCGCCGTGGATTTCTTTTCTTGCGTCAGTGATACTGATACAGTGATACATACAGTTTGTTCTCCAAAAAGTTTTGGGGGATTCAGCTGAATCTCCATGCTCCGGTCAGTGCCAGCCGCTCGCCACAGGTGGCTTCCATGGAATGGCCTTGCCAGGGGCTCATCCAGAACCCCACATTGTCATGCTGCTGCTGCTGCTGTCAGTTCTTGGCATGTCCATGATTCATCATCACCATGTGCGTCGAGCTGGAGCTGGGCCAGTCAGGTTGGTGACAGGATTCAGCTGCGGCCATTCTCGGCCGCTCCGGCGATCGTCGGGGATGGGATTGAGGATGTGGATGATCGGAGGGTCAAGCAGATGCGGAGGAGGCGCGACGCCCGCATCGCGCAGAAGGCATTCATGGAGTACCTCCATGTCACGCGTGGGATTTGCTTCAGTGATGCCGAGCACATGAGCAAGCGCTCGCCGATCTTCATCAGCAAGCTGCTGGAGAAGGTGAAGGATGCGGCGAAGGAGCCCACGGAGGAGGGGGAGGAGGTGCCCTTCAGGTCGAAGGTGAAGAAGAGGGAGATGAGGGATGAGAGGGTCAGCAAGGCGTTGGTGCGGCTGTTCAACTTCCACCCTATCAACGAGTTCGAGCCGTTCTTCGAGAGTATCGGCATCGCGCCGGGCGAGTATGAGCCATTGTTGCCTCGTGATCTCATGTTTCTCAATGATGATGAGACGATGCTCGACAATTTCCGGGTGCTTTGCAACTATGGCATCGCGCGCACCAAGATAGGGAGGATATACAGGGATGCTACCGAAGTGTTTAGTTTTGGCCATGGAGTTCTTGCGTCGAAGCTGAAGGCCCTTGAGGATCAAGGGTTGAGTAAGACCAGTGTGATCAAGCTAGTGATGTCGAGCCCTGTCATACTGGTCCGTGATCCAAATGTGGAATTGAAGATTCTGCGCTGGCTAGATGATGTTGGAATTCAGAGAGACTGGCTTGGCCGATTCTTATCTGTAAAGAAGTCTTATAACTGGGGAAAGATGGTCCAAGTCCCTCAGTTCTTCAGTGATTTAGGATTCACTAATGAAGGTATTGGCAAATTGGTCAGACAGAATCCCGATTTCTTGTTTAGTGGTTCAGGAAAGATGCTGTTCTCGGCAGTCCTCGTCATGCTAAAAGCTGGGTTTGGAAAAAAGGAATTGGTTGATCTTTTTCTGAATTTCCCAAATTTGTCAGTCGACAATTTCACGAGGAACCTGCGAAGGGGCATATTCTTCTTAGCTGAGATTGGTGTTAGTGAAGAGGACATTAAGAAATTTGTGGTGTCTAACGGTTCAATACTTGGTTC CGTCCAATTGAAGAAACCAAACAGCATTATGACACATCTCAGTGTAGGGAAGAAGCGCCTTTGCAGGATGGTAATGGAGGATCCACAACTGTTGATGAAATTCTCATTAGGGGCAAAGGTCAGCCGCATA CCGAAA GTTGATCTCCAT GAAGCATCCTTCAAGGAGAAGGTGAAATTTTTACAGAA CTTAGGATTTAT GGAAGGAT CCGAACGAATGACGA GGGGACTCAAAGCA TTTCGTGGTAAAGGTGACGAGCTAAAAGA TCGCTACGACTTCTT GGTCAAGACCGG TTTGGACCCGGAACATGTGGTGCAGATGATCACTATGGCTCCACATGTTCTGAATCAGAAGATCCATGTCCTTGAATCCAAGATATCCTTCCTTGTAAATGATAT GGGATATCCTCTGAGTACCCT GGTAATTTTCCCTTCATTCCTCTCGTTTACCGTGGAGAGAACCAAGCTTAGG TTTTTGATGTACAATTGGTTGTTGGAGAAAGGAGTGATTGCTACTGGACTAGCTCTTAGCACTCTCCTAGCCACTGCAGACAAACATTTCGTAAAACGTTATGTAGTAAGGCACCCCATGGGTTTAGAAGTCTGGGAGAAATTCAAGACAGAGGTAGCTTCAACAAAAAACAACACACCCTGTACTCCAGATGATTAGCCTGATATGTTATATTTTTCTTTCTCATCAACTTACTTT                                                                                                                                        ]
[+] EMBL CA763977             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    GGTTGAGTAAGACCAGTGTGATCAAGCTAGTGATGTCGAGCCCTGTCATACTGGTCCGTGATCCAAATGTGGAATTGAAGATTCTGCGCTGGCTAGATGATGTTGGAATTCAGAGAGACTGGCTTGGCCGATTCTTATCTGTAAAGAAGTCTTATAACTGGGGAAAGATGGTCCAAGTCCCTCAGTTCTTCAGTGATTTAGGATTCACTAATGAAGGTATTGGCAAATTGGTCAGACAGAATCCCGATTTCTTGTTTAGTGGTTCAGGAAAGATGCTGTTCTCGGCAGTCCTCGTCATGCTAAAAGCTGGGTTTGGAAAAAAGGAATTGGTTGATCTTTTTCTGAATTTCCCAAATTTGTCAGTCGACAATTTCACGAGGAACCTGCGAAGGGGCATATTCTTCTTAGCTGAGATTGGTGTTAGTGAAGAGGACGTTAAGAAATTTGTGGTGTCTAACGGTTCAATACTTGGTTC CGTCCAATTGAAGAAACCAAACAGCATTATGACACATCTCAGTGTAGGGAAGAAGCGCCTTTGCAGGATGGTAATGGAGGATCCACAACTGGTGATGAAATTCTCATTANGGGCAAAGGTCAGNCGCATACCCGAAAGGTTGATCTCCATGGAAGCATCCTTCAAGGAGAAGGNGAAANTTTTACAGAACCTTAGGATTTATGGGAAGGATNCCGACCGAATGACCANGGGGACTCAAAGCATTTTCGGGGTAAAGGNGACGAGCTTAAANANCCGCTACGACTTCTTGGGCCAANACCGGNTTGGGNCCCGGNACATGg                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL CB626739             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        cTGGTTCNCGTCCAATTGAAGAAACCAAACAGCATTATGACACATCTCAGTGTAGGGAAGAAGCGCCTTTGCAGGATGGTAATGGAGGATCCACAACTGTTGATGAAATTCTCATTAGGGGCAAAGGTCAGCCGCATA CCGAAA GTTGATCTCCAT GAAGCATCCTTCAAGGAGAAGGTGAAATTTTTACAGAA CTTAGGATTTAT GGAAGGAT CCGAACGAATGACGA GGGGACTCAAAGCA TTTCGTGGTAAAGGTGACGAGCTAAAAGA TCGCTACGACTTCTT GGTCAAGACCGG TTTGGACCCGGAACATGTGGTGCAGATGATCACTATGGCTCCACATGTTCTGAATCAGAAGATCCATGTCCTTGAATCCAAGATATCCTTCCTTGTAAATGATAT GGGATATCCTCTGAGTACCCT GGTAATTTTCCCTTCATTCCTCTCGTTTACCGTGGAGAGAACCAAGCTTAGG TTTTTGATGTACAATTGGTTGTTGGAGAAAGGAGTGATTGCTACTGGACTAGCTCTTAGCACTCTCCTAGCCACTGCAGACAAACATTTCGTAAAACGTTATGTAGTAAGGCACCCCATGGGTTTAGAAGTCTGGGAGAAATTCAAGACAGAGGTAGCTTCAACAAAAAACAACACACCCTGTACTCCAGATGATTAGCCTGATATGTTATATTTTTCTTTCTCATCAACTTACTTTTTTGCTGGCTAAGCAACTCGTTTTG                                                                                                               ]
[+] EMBL AU063075             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      AACTGTTGATGAAATTCTCATTAGGGGCAAAGGTCAGCCGCATA CCGAAA GTTGATCTCCAT GAAGCATCCTTCAAGGAGAAGGTGAAATTTTTACAGAA CTTAGGATTTAT GGAAGGAT CCGAACGAATGACGA GGGGACTCAAAGCA TTTCGTGGTAAAGGTGACGAGCTAAAAGA TCGCTACGACTTCTT GGTCAAGACCGG TTTGGACCCGGAACATGTGGTGCAGATGATCACTATGGCTCCACATGTTCTGAATCAGAAGATCCATGTCCTTGAATCCAAGATATCCTTCCTTGTAAATGATATGGGGATATCCTCTGAGTACCCTGGGTAATTTTCCCTTCATTCCTCTCGTTTACCGTGGAGAGAACCAAGCTTAGGNTTTTTAATGTACAATTGGTTNTTGGAGAAAGGAGT ATTTCTACTNGACTAGCTCT                                                                                                                                                                                                                                                                                                                             ]


>consensus_9428#0 GCGGCGCCGGCGAGTGGCTCCCCCGAGCGCGCCTCCCTTCCGCGAGCCCTCCTTCCACCA CCGAAGCACGACCTCCACCTCGCTCTCCGCTCTACTGGACTGTAGCCGAGTGGAGATTGG CGGCAAGCCCAACCATGCTCGGATTATTCTGAGAGTGAGTGTGTTTGTTCATCCAGTTCT CTTCATCCAATCCAAATCTTTCTTTCTAGGAGGGAGGGAGTGCCCAGTTCGCCGTGGATT TCTTTTCTTGCGTCAGTGATACTGATACAGTGATACATACAGTTTGTTCTCCAAAAAGTT TTGGGGGATTCAGCTGAATCTCCATGCTCCGGTCAGTGCCAGCCGCTCGCCACAGGTGGC TTCCATGGAATGGCCTTGCCAGGGGCTCATCCAGAACCCCACATTGTCATGCTGCTGCTG CTGCTGTCAGTTCTTGGCATGTCCATGATTCATCATCACCATGTGCGTCGAGCTGGAGCT GGGCCAGTCAGGTTGGTGACAGGATTCAGCTGCGGCCATTCTCGGCCGCTCCGGCGATCG TCGGGGATGGGATTGAGGATGTGGATGATCGGAGGGTCAAGCAGATGCGGAGGAGGCGCG ACGCCCGCATCGCGCAGAAGGCATTCATGGAGTACCTCCATGTCACGCGTGGGATTTGCT TCAGTGATGCCGAGCACATGAGCAAGCGCTCGCCGATCTTCATCAGCAAGCTGCTGGAGA AGGTGAAGGATGCGGCGAAGGAGCCCACGGAGGAGGGGGAGGAGGTGCCCTTCAGGTCGA AGGTGAAGAAGAGGGAGATGAGGGATGAGAGGGTCAGCAAGGCGTTGGTGCGGCTGTTCA ACTTCCACCCTATCAACGAGTTCGAGCCGTTCTTCGAGAGTATCGGCATCGCGCCGGGCG AGTATGAGCCATTGTTGCCTCGTGATCTCATGTTTCTCAATGATGATGAGACGATGCTCG ACAATTTCCGGGTGCTTTGCAACTATGGCATCGCGCGCACCAAGATAGGGAGGATATACA GGGATGCTACCGAAGTGTTTAGTTTTGGCCATGGAGTTCTTGCGTCGAAGCTGAAGGCCC TTGAGGATCAAGGGTTGAGTAAGACCAGTGTGATCAAGCTAGTGATGTCGAGCCCTGTCA TACTGGTCCGTGATCCAAATGTGGAATTGAAGATTCTGCGCTGGCTAGATGATGTTGGAA TTCAGAGAGACTGGCTTGGCCGATTCTTATCTGTAAAGAAGTCTTATAACTGGGGAAAGA TGGTCCAAGTCCCTCAGTTCTTCAGTGATTTAGGATTCACTAATGAAGGTATTGGCAAAT TGGTCAGACAGAATCCCGATTTCTTGTTTAGTGGTTCAGGAAAGATGCTGTTCTCGGCAG TCCTCGTCATGCTAAAAGCTGGGTTTGGAAAAAAGGAATTGGTTGATCTTTTTCTGAATT TCCCAAATTTGTCAGTCGACAATTTCACGAGGAACCTGCGAAGGGGCATATTCTTCTTAG CTGAGATTGGTGTTAGTGAAGAGGACATTAAGAAATTTGTGGTGTCTAACGGTTCAATAC TTGGTTCCGTCCAATTGAAGAAACCAAACAGCATTATGACACATCTCAGTGTAGGGAAGA AGCGCCTTTGCAGGATGGTAATGGAGGATCCACAACTGTTGATGAAATTCTCATTAGGGG CAAAGGTCAGCCGCATACCGAAAGTTGATCTCCATGAAGCATCCTTCAAGGAGAAGGTGA AATTTTTACAGAACTTAGGATTTATGGAAGGATCCGAACGAATGACGAGGGGACTCAAAG CATTTCGTGGTAAAGGTGACGAGCTAAAAGATCGCTACGACTTCTTGGTCAAGACCGGTT TGGACCCGGAACATGTGGTGCAGATGATCACTATGGCTCCACATGTTCTGAATCAGAAGA TCCATGTCCTTGAATCCAAGATATCCTTCCTTGTAAATGATATGGGATATCCTCTGAGTA CCCTGGTAATTTTCCCTTCATTCCTCTCGTTTACCGTGGAGAGAACCAAGCTTAGGTTTT TGATGTACAATTGGTTGTTGGAGAAAGGAGTGATTGCTACTGGACTAGCTCTTAGCACTC TCCTAGCCACTGCAGACAAACATTTCGTAAAACGTTATGTAGTAAGGCACCCCATGGGTT TAGAAGTCTGGGAGAAATTCAAGACAGAGGTAGCTTCAACAAAAAACAACACACCCTGTA CTCCAGATGATTAGCCTGATATGTTATATTTTTCTTTCTCATCAACTTACTTTTTTGCTG GCTAAGCAACTCGTTTTGCTGCACACCAATAGGTTGCCCCAACTTTGTCTGGAGTTTTTC TCCCTCTCTTAACTTTAGGTGTGTATATCTCTGTTAATGATTTTGTCCACAGAGAAGATT GTTGATCTT



consensusID : consensus_9428#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 136
fasta sequence
                              [GACGAGACAAGGGGGGGTTTAGAAGTTTGGGAGAAATTCAAGACAGAGGTAGCTTCAACAAAAAACAACACACCCTGTACTCCAGATGATTAGCCTGATATGTTATATTTTTCTTTCTCATCAAAAAAAAAAAAAA]

[-] EMBL CA760870             [GACGAGACAAGGGGGGGTTTAGAAGTTTGGGAGAAATTCAAGACAGAGGTAGCTTCAACAAAAAACAACACACCCTGTACTCCAGATGATTAGCCTGATATGTTATATTTTTCTTTCTCATCAAAAAAAAAAAAAA]


>consensus_9428#1 GACGAGACAAGGGGGGGTTTAGAAGTTTGGGAGAAATTCAAGACAGAGGTAGCTTCAACA AAAAACAACACACCCTGTACTCCAGATGATTAGCCTGATATGTTATATTTTTCTTTCTCA TCAAAAAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9428#0      GCGGCGCCGGCGAGTGGCTCCCCCGAGCGCGCCTCCCTTCCGCGAGCCCTCCTTCCACCA 60
consensus_9428#1      ------------------------------------------------------------
                                                                                  

consensus_9428#0      CCGAAGCACGACCTCCACCTCGCTCTCCGCTCTACTGGACTGTAGCCGAGTGGAGATTGG 120
consensus_9428#1      ------------------------------------------------------------
                                                                                  

consensus_9428#0      CGGCAAGCCCAACCATGCTCGGATTATTCTGAGAGTGAGTGTGTTTGTTCATCCAGTTCT 180
consensus_9428#1      ------------------------------------------------------------
                                                                                  

consensus_9428#0      CTTCATCCAATCCAAATCTTTCTTTCTAGGAGGGAGGGAGTGCCCAGTTCGCCGTGGATT 240
consensus_9428#1      ------------------------------------------------------------
                                                                                  

consensus_9428#0      TCTTTTCTTGCGTCAGTGATACTGATACAGTGATACATACAGTTTGTTCTCCAAAAAGTT 300
consensus_9428#1      ------------------------------------------------------------
                                                                                  

consensus_9428#0      TTGGGGGATTCAGCTGAATCTCCATGCTCCGGTCAGTGCCAGCCGCTCGCCACAGGTGGC 360
consensus_9428#1      ------------------------------------------------------------
                                                                                  

consensus_9428#0      TTCCATGGAATGGCCTTGCCAGGGGCTCATCCAGAACCCCACATTGTCATGCTGCTGCTG 420
consensus_9428#1      ------------------------------------------------------------
                                                                                  

consensus_9428#0      CTGCTGTCAGTTCTTGGCATGTCCATGATTCATCATCACCATGTGCGTCGAGCTGGAGCT 480
consensus_9428#1      ------------------------------------------------------------
                                                                                  

consensus_9428#0      GGGCCAGTCAGGTTGGTGACAGGATTCAGCTGCGGCCATTCTCGGCCGCTCCGGCGATCG 540
consensus_9428#1      ------------------------------------------------------------
                                                                                  

consensus_9428#0      TCGGGGATGGGATTGAGGATGTGGATGATCGGAGGGTCAAGCAGATGCGGAGGAGGCGCG 600
consensus_9428#1      ------------------------------------------------------------
                                                                                  

consensus_9428#0      ACGCCCGCATCGCGCAGAAGGCATTCATGGAGTACCTCCATGTCACGCGTGGGATTTGCT 660
consensus_9428#1      ------------------------------------------------------------
                                                                                  

consensus_9428#0      TCAGTGATGCCGAGCACATGAGCAAGCGCTCGCCGATCTTCATCAGCAAGCTGCTGGAGA 720
consensus_9428#1      ------------------------------------------------------------
                                                                                  

consensus_9428#0      AGGTGAAGGATGCGGCGAAGGAGCCCACGGAGGAGGGGGAGGAGGTGCCCTTCAGGTCGA 780
consensus_9428#1      ------------------------------------------------------------
                                                                                  

consensus_9428#0      AGGTGAAGAAGAGGGAGATGAGGGATGAGAGGGTCAGCAAGGCGTTGGTGCGGCTGTTCA 840
consensus_9428#1      ------------------------------------------------------------
                                                                                  

consensus_9428#0      ACTTCCACCCTATCAACGAGTTCGAGCCGTTCTTCGAGAGTATCGGCATCGCGCCGGGCG 900
consensus_9428#1      ------------------------------------------------------------
                                                                                  

consensus_9428#0      AGTATGAGCCATTGTTGCCTCGTGATCTCATGTTTCTCAATGATGATGAGACGATGCTCG 960
consensus_9428#1      ------------------------------------------------------------
                                                                                  

consensus_9428#0      ACAATTTCCGGGTGCTTTGCAACTATGGCATCGCGCGCACCAAGATAGGGAGGATATACA 1020
consensus_9428#1      ------------------------------------------------------------
                                                                                  

consensus_9428#0      GGGATGCTACCGAAGTGTTTAGTTTTGGCCATGGAGTTCTTGCGTCGAAGCTGAAGGCCC 1080
consensus_9428#1      ------------------------------------------------------------
                                                                                  

consensus_9428#0      TTGAGGATCAAGGGTTGAGTAAGACCAGTGTGATCAAGCTAGTGATGTCGAGCCCTGTCA 1140
consensus_9428#1      ------------------------------------------------------------
                                                                                  

consensus_9428#0      TACTGGTCCGTGATCCAAATGTGGAATTGAAGATTCTGCGCTGGCTAGATGATGTTGGAA 1200
consensus_9428#1      ------------------------------------------------------------
                                                                                  

consensus_9428#0      TTCAGAGAGACTGGCTTGGCCGATTCTTATCTGTAAAGAAGTCTTATAACTGGGGAAAGA 1260
consensus_9428#1      ------------------------------------------------------------
                                                                                  

consensus_9428#0      TGGTCCAAGTCCCTCAGTTCTTCAGTGATTTAGGATTCACTAATGAAGGTATTGGCAAAT 1320
consensus_9428#1      ------------------------------------------------------------
                                                                                  

consensus_9428#0      TGGTCAGACAGAATCCCGATTTCTTGTTTAGTGGTTCAGGAAAGATGCTGTTCTCGGCAG 1380
consensus_9428#1      ------------------------------------------------------------
                                                                                  

consensus_9428#0      TCCTCGTCATGCTAAAAGCTGGGTTTGGAAAAAAGGAATTGGTTGATCTTTTTCTGAATT 1440
consensus_9428#1      ------------------------------------------------------------
                                                                                  

consensus_9428#0      TCCCAAATTTGTCAGTCGACAATTTCACGAGGAACCTGCGAAGGGGCATATTCTTCTTAG 1500
consensus_9428#1      ------------------------------------------------------------
                                                                                  

consensus_9428#0      CTGAGATTGGTGTTAGTGAAGAGGACATTAAGAAATTTGTGGTGTCTAACGGTTCAATAC 1560
consensus_9428#1      ------------------------------------------------------------
                                                                                  

consensus_9428#0      TTGGTTCCGTCCAATTGAAGAAACCAAACAGCATTATGACACATCTCAGTGTAGGGAAGA 1620
consensus_9428#1      ------------------------------------------------------------
                                                                                  

consensus_9428#0      AGCGCCTTTGCAGGATGGTAATGGAGGATCCACAACTGTTGATGAAATTCTCATTAGGGG 1680
consensus_9428#1      ------------------------------------------------------------
                                                                                  

consensus_9428#0      CAAAGGTCAGCCGCATACCGAAAGTTGATCTCCATGAAGCATCCTTCAAGGAGAAGGTGA 1740
consensus_9428#1      ------------------------------------------------------------
                                                                                  

consensus_9428#0      AATTTTTACAGAACTTAGGATTTATGGAAGGATCCGAACGAATGACGAGGGGACTCAAAG 1800
consensus_9428#1      ------------------------------------------------------------
                                                                                  

consensus_9428#0      CATTTCGTGGTAAAGGTGACGAGCTAAAAGATCGCTACGACTTCTTGGTCAAGACCGGTT 1860
consensus_9428#1      ------------------------------------------------------------
                                                                                  

consensus_9428#0      TGGACCCGGAACATGTGGTGCAGATGATCACTATGGCTCCACATGTTCTGAATCAGAAGA 1920
consensus_9428#1      ------------------------------------------------------------
                                                                                  

consensus_9428#0      TCCATGTCCTTGAATCCAAGATATCCTTCCTTGTAAATGATATGGGATATCCTCTGAGTA 1980
consensus_9428#1      ------------------------------------------------------------
                                                                                  

consensus_9428#0      CCCTGGTAATTTTCCCTTCATTCCTCTCGTTTACCGTGGAGAGAACCAAGCTTAGGTTTT 2040
consensus_9428#1      ------------------------------------------------------------
                                                                                  

consensus_9428#0      TGATGTACAATTGGTTGTTGGAGAAAGGAGTGATTGCTACTGGACTAGCTCTTAGCACTC 2100
consensus_9428#1      ------------------------------------------------------------
                                                                                  

consensus_9428#0      TCCTAGCCACTGCAGACAAACATTTCGTAAAACGTTATGTAGTAAGGCACCCCATGGGTT 2160
consensus_9428#1      ----------------------------------------GACGAGACAAGG-GGGGGTT 19
                                                                  ** **      *****

consensus_9428#0      TAGAAGTCTGGGAGAAATTCAAGACAGAGGTAGCTTCAACAAAAAACAACACACCCTGTA 2220
consensus_9428#1      TAGAAGTTTGGGAGAAATTCAAGACAGAGGTAGCTTCAACAAAAAACAACACACCCTGTA 79
                      ******* ****************************************************

consensus_9428#0      CTCCAGATGATTAGCCTGATATGTTATATTTTTCTTTCTCATCAACTTACTTTTTTGCTG 2280
consensus_9428#1      CTCCAGATGATTAGCCTGATATGTTATATTTTTCTTTCTCATCAAAAAAAAAAAAAA--- 136
                      *********************************************   *           

consensus_9428#0      GCTAAGCAACTCGTTTTGCTGCACACCAATAGGTTGCCCCAACTTTGTCTGGAGTTTTTC 2340
consensus_9428#1      ------------------------------------------------------------
                                                                                  

consensus_9428#0      TCCCTCTCTTAACTTTAGGTGTGTATATCTCTGTTAATGATTTTGTCCACAGAGAAGATT 2400
consensus_9428#1      ------------------------------------------------------------
                                                                                  

consensus_9428#0      GTTGATCTT 2409
consensus_9428#1      ---------
                               




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)