cluster # 9433

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Oryza sativa
cluster # 9433 cluster # 9433 Sequences # 6 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9433#0 length = 1542 sequences # 6
consensusID : consensus_9433#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1542
fasta sequence
                              [GGNCGGACGCGTGGNCGGACGCGTGGNCTTTTGTTTGTATGGGATTTTAGTGGGGTGTGGATTTTGACGGTCGAACCGAGCTTAGGTGATTTTTGCGGGTGGAGTTTTTTAAGTTTTTGGATTTCCTGTTTCGCATCTGACGGTTCGGCTGTTCGATTGGTTGGTTTTGAATCGGATTTTGGAAATTTTTGGACGAATTTGGGCGGAAAGGGAGTGTTTTTGTGAGGGCTTTTGGTCAGTTTGAGTGAACTTTCCTAATTGGAGCCGGATTTTGTGGCCGTAGAGCTGCCTTTGAAAAGGCGACGCCTTTACTTTGCTCCTCTAGTCTAGTGATTGTGCCAAAGATAAAAAAAAAGTAATCTTCGTTTTGATGATCCAATTTGTGAGAAGATTTTGAGGATTTTTTTTTCGAGGTGGTTTTGTTTGCCTCTAGTGTTTATTTCTTTCCTCTCTCTTTCACTTGGCAGATCCAAGAAACACCGAAATTTTGCTTGATTTTGCCGCGGATTTTTTACTTTTTTAATCTGATCTGATCCGAGAGAATCCAAAGAATTTTTTGATCCAAGAAAAAGAGAAGAGAAGGGAATTTCTTGCTGTGTGCGGGCGCCATGGCCATGGGGCTGAACCGATTCACCCAATGGCTGTGGCCGGCGAGCACGGCGCGCGC-GGCGGCGGCGGCGGCGACGACGCAC-GAGCTCCCCACCACCGCCGCCGGCCTGACGAGCGCCTCCTTCCCGGACTTCCCTTCCGGGTTCCGGGAGCCGGACACCGTCACGTTCGCGGCGACCACGCGCCGCCGCGGCGGCCGCCGCAGCCGCCGCGAGGAGGACAGAGTGGACAGGGAGTTCGACATGGTGATCGTGGCGTCGGACGACGGCGGCGGCGGCGGGTGGCTGTCCGGGTCGGAGTCGGACGACTCCGACTGGGCCATCGGGTGGCAGGAGAAGCTCTCGCCGGAGCTGCAGACCGACGGCGACCCCGACGGCTGCTTCGCCGTCCTCGTCCGGTGCTACCGCCACGGCCAGCCCGAGCCGGCGGGGAGGCCCGACGGCGGCGCCCACTTCCTCGCCACCGCCGCCTCCCTCGCCAACGGCGGCGGCCTCTCCGGTGAGTAATCGAGGAGCAGCCATGTCGTTGTTCAGTTCATTTATGAAACAATTTTAGTGTCATTTAGTGTATTTGGGTTGTGCGGTTAATAATTGATACTGCGGCTTGATACCAATATGCTTTGGTTTATCCAATCCAGAATTAGGAAGGAATCATATGTGTGTGGTAAATGATTCTTGAAAATGGTTTGGGTACGAGTAATTAAGTCCCCGTTGATACGTCGGTTTCAGGAAATTATTTCAGTTTCAGAAGCTCACACAATTCACAAAATCTGACCCATTCAACCATCCGTGCTGTTCCGGCGATGAATTTAGCTTGTTATAAGCTGGTACAATATGAGCTAAATACAGTAGGATGAGAAATTGACGTACCAGATGTATGCCACGATGGGCTTATTTTCCCTTTTCGGTATAAGAATTATGTTAATCAACTTGG]

[+] EMBL AU088600             [GGNCGGACGCGTGGNCGGACGCGTGGNCTTTTGTTTGTATGGGATTTTAGTGGGGTGTGGATTTTGACGGTCGAACCGAGCTTAGGTGATTTTTGCGGGTGGAGTTTTTTAAGTTTTTGGATTTCCTGTTTCGCATCTGACGGTTCGGCTGTTCGATTGGTTGGTTTTGAATCGGATTTTGGAAATTTTTGGACGAATTTGGGCGGAAAGGGAGTGTTTTTGTGAGGGCTTTTGGTCAGTTTGAGTGAACTTTCCTAATTGGAGCCGGATTTTGTGGCCGTAGAGCTGCCTTTGAAAAGGCGACGCCTTTACTTTGCTCCTCTAGTCTAGTGATTGTGCCAAAGATAAAAAAAAAGTAATCTTCGTTTTGATGATCCAATTTGTGAGAAGATTTTGAGGATTTTTTTTTCGAGGTGGTTTTGTTTGCCTCTAGTGTTTATTTCTTTCCTCTCTCTTTCACTTGGCAGATCCAAGAAACACCGAAATTTTGCTTGATTTTGCCGCGGATTTTTTACTTTTTTAATCTGATCTGATCCGAGAGAATCCAAAGAATTTTTTGATCCAAGAAAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL AU063251             [               CGGACGCGTGGGCTTTTGTTTGTATGGGATTTTAGTGGGGTGTGGATTTTGACGGTCGAACCGAGCTTAGGTGATTTTTGCGGGTGGAGTTTTTTAAGTTTTTGGATTTCCTGTTTCGCATCTGACGGTTCGGCTGTTCGATTGGTTGGTTTTGAATCGGATTTTGGAAATTTTTGGACGAATTTGGGCGGAAAGGGAGTGTTTTTGTGAGGGC TTTGGTCAGTTTGAGTGAACTTTCCTAATTGGAGCCCGATTTTGTNGCCGTANAGCTGCCTTTGAAAAAGCGACGCCTTAAC TTGCTCCNCTAGTCTAGTGAATGTGCCAAAGATAAAAAAAAA TAA CCTCG TTTGATGATCC ATTTGTGAGAAAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL AU093341             [                                                                                                                                                                                                                                                                                                                                                                                                                                          CCTCTAGTGTTTATTTCTTTCCTCTCTCTTTCACTTGGCAGATCCAAGAAACACCGAAATTTTGCTTGATTTTGCCGCGGATTTTTTACTTTTTTAATCTGATCTGATCCGAGAGAATCCAAAGAATTTTTTGATCCAAGAAAAAGAGAAGAGAAGGGAATTTCTTGCTGTGTGCGGGCGCCATGGCCATGGGGCTGAACCGATTCACCCAATGGCTGTGGCCGGCGAGCACGGCGCGCGC GGCGGCGGCGGCGGCGACGACGCAC GAGCTCCCCACCACCGCCGCCGGCCTGACGAGCGCCTCCTTCCCGGACTTCCCTTCCGGGTTCCGGGAGCCGGACACCGTCACGTTCGCGGCGACCACG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL C29033               [                                                                                                                                                                                                                                                                                                                                                                                                                                          CCTCTAGTGTTTATTTCTTTCCTCTCTCTTTCACTTGGCAGATCCAAGAAACACCGAAATTTTGCTTGATTTTGCCGCGGATTTTTNACTTTTTTAATCTGATCTGATCCGAGAGAATCCAAAGAATTTTTTGATCCAAGAAAAAGAGAAGAGAAGGGAATTTCTTGCTGTGTGCGGGCGCCATGGCCATGGGGCTGAACCGATTCACCCAATGGCTGTGGCCGGCGAGCACGGCGCGCGCGGGCGGCGGCGGCGGCGACGACGAACGGAGCTNCCCACCACCGGGGACGACC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL AK109279             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          AGAGAAGAGAAGGGAATTTCTTGCTGTGTGCGGGCGCCATGGCCATGGGGCTGAACCGATTCACCCAATGGCTGTGGCCGGCGAGCACGGCGCGCGC GGCGGCGGCGGCGGCGACGACGCAC GAGCTCCCCACCACCGCCGCCGGCCTGACGAGCGCCTCCTTCCCGGACTTCCCTTCCGGGTTCCGGGAGCCGGACACCGTCACGTTCGCGGCGACCACGCGCCGCCGCGGCGGCCGCCGCAGCCGCCGCGAGGAGGACAGAGTGGACAGGGAGTTCGACATGGTGATCGTGGCGTCGGACGACGGCGGCGGCGGCGGGTGGCTGTCCGGGTCGGAGTCGGACGACTCCGACTGGGCCATCGGGTGGCAGGAGAAGCTCTCGCCGGAGCTGCAGACCGACGGCGACCCCGACGGCTGCTTCGCCGTCCTCGTCCGGTGCTACCGCCACGGCCAGCCCGAGCCGGCGGGGAGGCCCGACGGCGGCGCCCACTTCCTCGCCACCGCCGCCTCCCTCGCCAACGGCGGCGGCCTCTCCGGTGAGTAATCGAGGAGCAGCCATGTCGTTGTTCAGTTCATTTATGAAACAATTTTAGTGTCATTTAGTGTATTTGGGTTGTGCGGTTAATAATTGATACTGCG                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CB621655             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          GCCCCCTCGGCGGCCGCCGCAGCCGCCGCGAGGAGGACAGAGTGGACAGGGAGTTCGACATGGTGATCGTGGCGTCGGACGACGGCGGCGGCGGCGGGTGGCTGTCCGGGTCGGAGTCGGACGACTCCGACTGGGCCATCGGGTGGCAGGAGAAGCTCTCGCCGGAGCTGCAGACCGACGGCGACCCCGACGGCTGCTTCGCCGTCCTCGTCCGGTGCTACCGCCACGGCCAGCCCGAGCCGGCGGGGAGGCCCGACGGCGGCGCCCACTTCCTCGCCACCGCCGCCTCCCTCGCCAACGGCGGCGGCCTCTCCGGTGAGTAATCGAGGAGCAGCCATGTCGTTGTTCAGTTCATTTATGAAACAATTTTAGTGTCATTTAGTGTATTTGGGTTGTGCGGTTAATAATTGATACTGCGGCTTGATACCAATATGCTTTGGTTTATCCAATCCAGAATTAGGAAGGAATCATATGTGTGTGGTAAATGATTCTTGAAAATGGTTTGGGTACGAGTAATTAAGTCCCCGTTGATACGTCGGTTTCAGGAAATTATTTCAGTTTCAGAAGCTCACACAATTCACAAAATCTGACCCATTCAACCATCCGTGCTGTTCCGGCGATGAATTTAGCTTGTTATAAGCTGGTACAATATGAGCTAAATACAGTAGGATGAGAAATTGACGTACCAGATGTATGCCACGATGGGCTTATTTTCCCTTTTCGGTATAAGAATTATGTTAATCAACTTGG]




>consensus_9433#0
GGNCGGACGCGTGGNCGGACGCGTGGNCTTTTGTTTGTATGGGATTTTAGTGGGGTGTGG
ATTTTGACGGTCGAACCGAGCTTAGGTGATTTTTGCGGGTGGAGTTTTTTAAGTTTTTGG
ATTTCCTGTTTCGCATCTGACGGTTCGGCTGTTCGATTGGTTGGTTTTGAATCGGATTTT
GGAAATTTTTGGACGAATTTGGGCGGAAAGGGAGTGTTTTTGTGAGGGCTTTTGGTCAGT
TTGAGTGAACTTTCCTAATTGGAGCCGGATTTTGTGGCCGTAGAGCTGCCTTTGAAAAGG
CGACGCCTTTACTTTGCTCCTCTAGTCTAGTGATTGTGCCAAAGATAAAAAAAAAGTAAT
CTTCGTTTTGATGATCCAATTTGTGAGAAGATTTTGAGGATTTTTTTTTCGAGGTGGTTT
TGTTTGCCTCTAGTGTTTATTTCTTTCCTCTCTCTTTCACTTGGCAGATCCAAGAAACAC
CGAAATTTTGCTTGATTTTGCCGCGGATTTTTTACTTTTTTAATCTGATCTGATCCGAGA
GAATCCAAAGAATTTTTTGATCCAAGAAAAAGAGAAGAGAAGGGAATTTCTTGCTGTGTG
CGGGCGCCATGGCCATGGGGCTGAACCGATTCACCCAATGGCTGTGGCCGGCGAGCACGG
CGCGCGCGGCGGCGGCGGCGGCGACGACGCACGAGCTCCCCACCACCGCCGCCGGCCTGA
CGAGCGCCTCCTTCCCGGACTTCCCTTCCGGGTTCCGGGAGCCGGACACCGTCACGTTCG
CGGCGACCACGCGCCGCCGCGGCGGCCGCCGCAGCCGCCGCGAGGAGGACAGAGTGGACA
GGGAGTTCGACATGGTGATCGTGGCGTCGGACGACGGCGGCGGCGGCGGGTGGCTGTCCG
GGTCGGAGTCGGACGACTCCGACTGGGCCATCGGGTGGCAGGAGAAGCTCTCGCCGGAGC
TGCAGACCGACGGCGACCCCGACGGCTGCTTCGCCGTCCTCGTCCGGTGCTACCGCCACG
GCCAGCCCGAGCCGGCGGGGAGGCCCGACGGCGGCGCCCACTTCCTCGCCACCGCCGCCT
CCCTCGCCAACGGCGGCGGCCTCTCCGGTGAGTAATCGAGGAGCAGCCATGTCGTTGTTC
AGTTCATTTATGAAACAATTTTAGTGTCATTTAGTGTATTTGGGTTGTGCGGTTAATAAT
TGATACTGCGGCTTGATACCAATATGCTTTGGTTTATCCAATCCAGAATTAGGAAGGAAT
CATATGTGTGTGGTAAATGATTCTTGAAAATGGTTTGGGTACGAGTAATTAAGTCCCCGT
TGATACGTCGGTTTCAGGAAATTATTTCAGTTTCAGAAGCTCACACAATTCACAAAATCT
GACCCATTCAACCATCCGTGCTGTTCCGGCGATGAATTTAGCTTGTTATAAGCTGGTACA
ATATGAGCTAAATACAGTAGGATGAGAAATTGACGTACCAGATGTATGCCACGATGGGCT
TATTTTCCCTTTTCGGTATAAGAATTATGTTAATCAACTTGG
clustalw multiple alignements is not computed in this case