cluster # 9443

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 9443 cluster # 9443 Sequences # 6 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9443#0 length = 2156 sequences # 6
consensusID : consensus_9443#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 2156
fasta sequence
                              [GGGCTCGAGCCGCAGCCGCCAACGTCCCAAGCGACCGAGCCAAGCGCGTCACCCGCCACACTGTCACAGACGCGACGCGCTCCCGCTCCCCGACGATGCCGGCGGCGGCGGCGCTGTCCGACGACGACCGCCTGGTCGTCGCCCACTGCGCCGCGCTCTCCTTCCCACCCGCCTCCCAGCCGCCGCCCCCTCCCACCACCTCCTCCTCCTCCTCGGGCGCCGGCGCGGGCGCCTCCTTCCAGGTGCACCACGCGTCCCACCCGTACCCCTGCGCCGCCTTCGCGTTCCCGCCCTCCTGGTCCGCCGCGCCCGGCTGGGCCGCCGCGGGGCGCGCGGCGTTCGGGGACGCGGAGGTGGACCCGTCCCTCTTCCCGTCGCTCCGCAGCGTCGGGAGCGGCGTCCCCGCGCGCGCCAACGCCGCGTTCCTCGCCTCCTTCGGCGCCCTCCTCGACGGCTCGCCGCTCCAGTCCGAGGTATCTAGAGCTGTGGCAGAAGAGAAGCGTATTGTATTCACAGGCCATTCATCAGGGGGTTCAATAGCTACCCTTGCTGCCATATGGTTTCTTGAGACCTGCACCAGGAGAGGCAGTGTTAATCAGGCACACCCATTTTGTGTAACCTTTGGGGCTCCTCTTGTTGGAGACAATACCTTTAACAATGCTGTTCGAAGGGAGGGCTGGTCACAGTGTATTTTGAATTTTGTCGTGCCAGTAG-ACATCATCCCCCGCATACCACTTACTCCGCTTGCATCTGCCACAGAAGGAATTCAAGCTGTTCTGGATTGGTTATCCCCTCAAACTCCGAACTTCTCGCCTTCTGGGATGCCACTCATCATAAGTCAGTTTTATGAAAATTTACTGAGAAGCACACTTTCTATTGCGAGCTATGAGGCCTGTTCCTTCATGGGATGCACTAGCTCGATCTTAGGAACATTGACTTCCTTCATTGAGCTCTCCCCTTACAGACCCTGTGGGACTTATCTTTTCTTGACAAGCAGTGAACAGCTGGCCGTTCTGACAAATTCAGATGCTGTATTGCAGTTGCTATTTTACTGCCTTCAGTTGGATCCCCAGCAACAATTGCGTGATGCTGCTGAGAGAAGTTTAAGTGCTCATTGGCAATATGAACCAATTAAGCAAAGCATGATGCAAGAGATAGTTTGCGTGGATTACTTGGG-AGTGGTTTCATCAACACTTCCTGGTAGGCAGATGAGTAGCACAATAGTTGGAGGCCTTGAACTGAGCAAGGAAGCTATGTTGAGCCTTTCTGCAGCTGGACAATGGGAGAAGCAAAGGGAGACAAACCAGGCAAAAATAGATGGTGCAAGCTGCACCAAAATTAGGGAAGCCCTCAAGTCTCTGAACGAGTACAAAAGGACATGTGAACTCCATGAAGTGAGCTACTATGATTCCTTCAAGCTTCAGCGTGAAGTACATGACTTTAATGCAAATGTTAGCAGGTTGGAACTAGCTGGACTCTGGGATGAGATAGTTGAAATGCTGCGAAGGCGTGAGCTGCCAGATGGTTTCGAAAGCCGACAAGATTGGGTGAATCTAGGAACCTTGTACCGCCGGTTGGTTGAGCCCTTAGACATTGCAAACTACTATAGGCATTCCAAGAACGAGGACACTGGCTCCTACCTCTCCAAGGGAAGGCCAAGACGTTACAAG-TACACCCAGGAGTGGCACGAGCAGTCGCAGCGCATCTCCTTCGGTTCTAGCCTTGAGTCTTGCTTCTGGGCAATGGCTGAGGAACTCCAGGCTGAGATTGCTAACGGCAAAACATTCGAGGATGTGAGAGATAGAGTAGTTAAGCTTGAGAGTGATGCTCACGGATGGTCCATGTCTGGAAGTTTAGGGAAGGATATATTCCTGAGCCGTTCTTCTTTTGTGATTTGGTGGAAGACGCTCCCGGAGAACCACAGATCTGCATCATGCATCGCGAAACTTGTGCCCTGGTAAGGAAGCTTTACATTATATGGATAGAATTATTTGCCTTCACAATGATGAGGCAGGCATTCGTGGCATGTTGCAACTACTGCCACTGTAACTGTATACCATATGCATGAACTTTGTAAATATGCTACTTCGCGTTTTTGTATCCTACACAATACAATCAGTTCAAGTTGAACCATTTGTTTCTTGCATCAAAAAAAA]

[+] EMBL AK100117             [GGGCTCGAGCCGCAGCCGCCAACGTCCCAAGCGACCGAGCCAAGCGCGTCACCCGCCACACTGTCACAGACGCGACGCGCTCCCGCTCCCCGACGATGCCGGCGGCGGCGGCGCTGTCCGACGACGACCGCCTGGTCGTCGCCCACTGCGCCGCGCTCTCCTTCCCACCCGCCTCCCAGCCGCCGCCCCCTCCCACCACCTCCTCCTCCTCCTCGGGCGCCGGCGCGGGCGCCTCCTTCCAGGTGCACCACGCGTCCCACCCGTACCCCTGCGCCGCCTTCGCGTTCCCGCCCTCCTGGTCCGCCGCGCCCGGCTGGGCCGCCGCGGGGCGCGCGGCGTTCGGGGACGCGGAGGTGGACCCGTCCCTCTTCCCGTCGCTCCGCAGCGTCGGGAGCGGCGTCCCCGCGCGCGCCAACGCCGCGTTCCTCGCCTCCTTCGGCGCCCTCCTCGACGGCTCGCCGCTCCAGTCCGAGGTATCTAGAGCTGTGGCAGAAGAGAAGCGTATTGTATTCACAGGCCATTCATCAGGGGGTTCAATAGCTACCCTTGCTGCCATATGGTTTCTTGAGACCTGCACCAGGAGAGGCAGTGTTAATCAGGCACACCCATTTTGTGTAACCTTTGGGGCTCCTCTTGTTGGAGACAATACCTTTAACAATGCTGTTCGAAGGGAGGGCTGGTCACAGTGTATTTTGAATTTTGTCGTGCCAGTAG ACATCATCCCCCGCATACCACTTACTCCGCTTGCATCTGCCACAGAAGGAATTCAAGCTGTTCTGGATTGGTTATCCCCTCAAACTCCGAACTTCTCGCCTTCTGGGATGCCACTCATCATAAGTCAGTTTTATGAAAATTTACTGAGAAGCACACTTTCTATTGCGAGCTATGAGGCCTGTTCCTTCATGGGATGCACTAGCTCGATCTTAGGAACATTGACTTCCTTCATTGAGCTCTCCCCTTACAGACCCTGTGGGACTTATCTTTTCTTGACAAGCAGTGAACAGCTGGCCGTTCTGACAAATTCAGATGCTGTATTGCAGTTGCTATTTTACTGCCTTCAGTTGGATCCCCAGCAACAATTGCGTGATGCTGCTGAGAGAAGTTTAAGTGCTCATTGGCAATATGAACCAATTAAGCAAAGCATGATGCAAGAGATAGTTTGCGTGGATTACTTGGG AGTGGTTTCATCAACACTTCCTGGTAGGCAGATGAGTAGCACAATAGTTGGAGGCCTTGAACTGAGCAAGGAAGCTATGTTGAGCCTTTCTGCAGCTGGACAATGGGAGAAGCAAAGGGAGACAAACCAGGCAAAAATAGATGGTGCAAGCTGCACCAAAATTAGGGAAGCCCTCAAGTCTCTGAACGAGTACAAAAGGACATGTGAACTCCATGAAGTGAGCTACTATGATTCCTTCAAGCTTCAGCGTGAAGTACATGACTTTAATGCAAATGTTAGCAGGTTGGAACTAGCTGGACTCTGGGATGAGATAGTTGAAATGCTGCGAAGGCGTGAGCTGCCAGATGGTTTCGAAAGCCGACAAGATTGGGTGAATCTAGGAACCTTGTACCGCCGGTTGGTTGAGCCCTTAGACATTGCAAACTACTATAGGCATTCCAAGAACGAGGACACTGGCTCCTACCTCTCCAAGGGAAGGCCAAGACGTTACAAG TACACCCAGGAGTGGCACGAGCAGTCGCAGCGCATCTCCTTCGGTTCTAGCCTTGAGTCTTGCTTCTGGGCAATGGCTGAGGAACTCCAGGCTGAGATTGCTAACGGCAAAACATTCGAGGATGTGAGAGATAGAGTAGTTAAGCTTGAGAGTGATGCTCACGGATGGTCCATGTCTGGAAGTTTAGGGAAGGATATATTCCTGAGCCGTTCTTCTTTTGTGATTTGGTGGAAGACGCTCCCGGAGAACCACAGATCTGCATCATGCATCGCGAAACTTGTGCCCTGGTAAGGAAGCTTTACATTATATGGATAGAATTATTTGCCTTCACAATGATGAGGCAGGCATTCGTGGCATGTTGCAACTACTGCCACTGTAACTGTATACCATATGCATGAACTTTGTAAATATGCTACTTCGCGTTTTTGTATCCTACACAATACAATCAGTTC                                  ]
[+] EMBL CF311123             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          TTTGTCGTGCCAGTAGAACATCATCCCCCGCATACCACTTACTCCGCTTGCATCTGCCACAGAAGGAATTCAAGCTGTTCTGGATTGGTTATCCCCTCAAACTCCGAACTTCTCGCCTTCTGGGATGCCACTCATCATAAGTCAGTTTTATGAAAATTTACTGAGAAGCACACTTTCTATTGCGAGCTATGAGGCCTGTTCCTTCATGGGATGCACTAGCTCGATCTTAGGAACATTGACTTCCTTCATTGAGCTCTCCCCTTACAGACCCTGTGGGACTTATCTTTTCTTGACAAGCAGTGAACAGCTGGCCGTTCTGACAAATTCAGATGCTGTATTGCAGTTGCTATTTTACTGCCTTCAGTTGGATCCCCAGCAACAATTGCGTGATGCTGCTGAGAGAAGTTTAAGTGCTCATTGGCAATATGAACCAATTAAGCAAAGCATGATGCAAGAGATAGTTTGCGTGGA TACTTGGGAAGTGGTTTCATCAACACTTCCTGGTAGGCAGATGAGTAGCACAATAGTTGGAGGCCTTGAACTGAGCAAGGAAGCTATGTTGAGCCTTTCTGCAGCTGGAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL CF311124             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                AACTACTATAGGCATTCCAAGAACGAGGACACTGGCTCCTACCTCTCCAAGGGAAGGCCAAGACGTTACAAG TACACCCAGGAGTGGCACGAGCAGTCGCAGCGCATCTCCTTCGGTTCTAGCCTTGAGTCTTGCTTCTGGGCAATGGCTGAGGAACTCCAGGCTGAGATTGCTAACGGCAAAACATTCGAGGATGTGAGAGATAGAGTAGTTAAGCTTGAGAGTGATGCTCACGGATGGTCCATGTCTGGAAGTTTAGGGAAGGATATATTCCTGAGCCGTTCTTCTTTTGTGATTTGGTGGAAGACGCTCCCGGAGAACCACAGATCTGCATCATGCATCGTGAAACTTGTGCCCTGGTAAGGAAGCTTTACATTATATGGATAGAATTATTTGCCTTCACAATGATGAGGCAGGCATTCGTGGCATGTTGCAACTACTGCCACTGTAACTGTATACCATATGCATGAACTTTGTAAATATGCTACTTCGCGTTTTTGTATCCTACACAATACAATCAGTTCAAGTTGAACCATTTGTTTCTTGCATCAAAAAA  ]
[+] EMBL BM038547             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GGCCAAGACGTTACAAGTTACACCCAGGAGTGGCACGAGCAGTCGCAGCGCATCTCCTTCGGTTCTAGCCTTGAGTCTTGCTTCTGGGCAATGGCTGAGGAACTCCAGGCTGAGATTGCTAACGGC AAACATTCGACGATGTGAGAGATAGAGTAGTTAAGCTTGAGAGTGATGCTCACGGATGGTCCATGTCTGGAAGTTTAGGGAAGGATATATTCCTGAGCCGTTCTTCTTTTGTGATTTGGTGGAAGACGCTCCCGGAGAACCACAGATCTGCATCATGCATCGCGAAACTTGTGCCCTGGTAAGGAAGCTTTACATTATATGGATAGAATTATTTGCCTTCAC ATGATGAGGCAGGCATTCGTGGCATGTTGCAACTACTGCC CTGTAACTGTATACCATATGCATGAACTTTGTAAATATGCTACTTCGCGTTTTTGTATCCTACAC ATAC ATCAGTTCAAGTTGAACCATTTGTTTCTTGCATCAAAA    ]
[+] EMBL AU066063             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  AGTTAAGNTTGAGAGTGATNTTCACGGATGGTCCATGTCTGGAAGTTTAGGGAAGGATATATTCNTGAGCCGTTCTTCTTTTGTAATTTGGTGGAAGACGCTCNCGGAGAACCACAGATCTGCATCATGCATCGCGAAACTTGTGCCNTGGTAAGGAAGNTTTACATTATATGGATAGAATTATTTGCCTTCACAATGATGAGGCAGGCATTCGTGGCATGTTGCAACTACTGCCACTGTAACTGTATACCATATGCATGAACTTTGTAAATAT                                                                           ]
[+] EMBL AU161532             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  CTGAGCCGTTCTTCTTTTGTGATTTGGTGGAAGACGCTCCCGGAGAACCACAGATCTGCATCATGCATCGCGAAACTTGTGCCCTGGTACANTANCTTTACATTATATGGATAGAATTATTTNCCTTNACAATGATGANNCANGCATTCGTGGCNTGTTGCAACTACTGCCACTGTAACTGTATACCATATGCATGAACTTTGTAAATATGCTACTTCGCGTTTTTGTATCCTACNNAATACAATCAGTTCAAGTTGAACCATTTGTTTCTTGCATCANAAAAAA]




>consensus_9443#0
GGGCTCGAGCCGCAGCCGCCAACGTCCCAAGCGACCGAGCCAAGCGCGTCACCCGCCACA
CTGTCACAGACGCGACGCGCTCCCGCTCCCCGACGATGCCGGCGGCGGCGGCGCTGTCCG
ACGACGACCGCCTGGTCGTCGCCCACTGCGCCGCGCTCTCCTTCCCACCCGCCTCCCAGC
CGCCGCCCCCTCCCACCACCTCCTCCTCCTCCTCGGGCGCCGGCGCGGGCGCCTCCTTCC
AGGTGCACCACGCGTCCCACCCGTACCCCTGCGCCGCCTTCGCGTTCCCGCCCTCCTGGT
CCGCCGCGCCCGGCTGGGCCGCCGCGGGGCGCGCGGCGTTCGGGGACGCGGAGGTGGACC
CGTCCCTCTTCCCGTCGCTCCGCAGCGTCGGGAGCGGCGTCCCCGCGCGCGCCAACGCCG
CGTTCCTCGCCTCCTTCGGCGCCCTCCTCGACGGCTCGCCGCTCCAGTCCGAGGTATCTA
GAGCTGTGGCAGAAGAGAAGCGTATTGTATTCACAGGCCATTCATCAGGGGGTTCAATAG
CTACCCTTGCTGCCATATGGTTTCTTGAGACCTGCACCAGGAGAGGCAGTGTTAATCAGG
CACACCCATTTTGTGTAACCTTTGGGGCTCCTCTTGTTGGAGACAATACCTTTAACAATG
CTGTTCGAAGGGAGGGCTGGTCACAGTGTATTTTGAATTTTGTCGTGCCAGTAGACATCA
TCCCCCGCATACCACTTACTCCGCTTGCATCTGCCACAGAAGGAATTCAAGCTGTTCTGG
ATTGGTTATCCCCTCAAACTCCGAACTTCTCGCCTTCTGGGATGCCACTCATCATAAGTC
AGTTTTATGAAAATTTACTGAGAAGCACACTTTCTATTGCGAGCTATGAGGCCTGTTCCT
TCATGGGATGCACTAGCTCGATCTTAGGAACATTGACTTCCTTCATTGAGCTCTCCCCTT
ACAGACCCTGTGGGACTTATCTTTTCTTGACAAGCAGTGAACAGCTGGCCGTTCTGACAA
ATTCAGATGCTGTATTGCAGTTGCTATTTTACTGCCTTCAGTTGGATCCCCAGCAACAAT
TGCGTGATGCTGCTGAGAGAAGTTTAAGTGCTCATTGGCAATATGAACCAATTAAGCAAA
GCATGATGCAAGAGATAGTTTGCGTGGATTACTTGGGAGTGGTTTCATCAACACTTCCTG
GTAGGCAGATGAGTAGCACAATAGTTGGAGGCCTTGAACTGAGCAAGGAAGCTATGTTGA
GCCTTTCTGCAGCTGGACAATGGGAGAAGCAAAGGGAGACAAACCAGGCAAAAATAGATG
GTGCAAGCTGCACCAAAATTAGGGAAGCCCTCAAGTCTCTGAACGAGTACAAAAGGACAT
GTGAACTCCATGAAGTGAGCTACTATGATTCCTTCAAGCTTCAGCGTGAAGTACATGACT
TTAATGCAAATGTTAGCAGGTTGGAACTAGCTGGACTCTGGGATGAGATAGTTGAAATGC
TGCGAAGGCGTGAGCTGCCAGATGGTTTCGAAAGCCGACAAGATTGGGTGAATCTAGGAA
CCTTGTACCGCCGGTTGGTTGAGCCCTTAGACATTGCAAACTACTATAGGCATTCCAAGA
ACGAGGACACTGGCTCCTACCTCTCCAAGGGAAGGCCAAGACGTTACAAGTACACCCAGG
AGTGGCACGAGCAGTCGCAGCGCATCTCCTTCGGTTCTAGCCTTGAGTCTTGCTTCTGGG
CAATGGCTGAGGAACTCCAGGCTGAGATTGCTAACGGCAAAACATTCGAGGATGTGAGAG
ATAGAGTAGTTAAGCTTGAGAGTGATGCTCACGGATGGTCCATGTCTGGAAGTTTAGGGA
AGGATATATTCCTGAGCCGTTCTTCTTTTGTGATTTGGTGGAAGACGCTCCCGGAGAACC
ACAGATCTGCATCATGCATCGCGAAACTTGTGCCCTGGTAAGGAAGCTTTACATTATATG
GATAGAATTATTTGCCTTCACAATGATGAGGCAGGCATTCGTGGCATGTTGCAACTACTG
CCACTGTAACTGTATACCATATGCATGAACTTTGTAAATATGCTACTTCGCGTTTTTGTA
TCCTACACAATACAATCAGTTCAAGTTGAACCATTTGTTTCTTGCATCAAAAAAAA
clustalw multiple alignements is not computed in this case