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Oryza sativa
cluster # 9444 cluster # 9444       Sequences # 6       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9444#0 length = 2574 sequences # 5  
consensus_9444#1 length = 675 sequences # 1  

consensusID : consensus_9444#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 2574
fasta sequence
                              [CGCTTCCTCCTCTTTCTCTCTCTACGCCCTCGTCTCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGCATCTTCTTCTTCTTCTTCCAGTGCTCGGCTCTCTCTTTTACTCAACTGCTCACACTCCCCAAACAACCAACCCACCTCCATCTCCATCTCCATGTGGTGCTGAGGCCGGAGCAGCAGCGAGGAATCGGAGCGGTAGCCATGGCGCCGTGAATTCGCGCGAGGACGTGCGATCTCTGAGAGAGGGGGGAGTGTAGTGCTCGAGTGAGTGATTCGGAGGCGGTGCTGCAGCTGCGGCGGCGTTCGGAGATGAGGCATTGTTGGGGCGGTGCTTCCTCCGTCCTCCGGCTCCTCCTCGCGTTGCAGTGCGGGGTGGTGGTGGTGGTGCTGCAGTGCTCGGCGAATGCGTTGGGCAGTGACGTCTCGGCGCTCATCGCGTTCAAGCGCGCAATCATCGGGGACCCCCGGTCGGCGCTCGCGGAATGGAGCGATGCGGACGGGAACGCCTGCGACTGGCACGGGGTGATCTGCTCCTCGCCGCAGGGCTCCGTGATCTCCCTGAAGCTGTCAAACTCGTCGCTGAAGGGATTTATCGCGCCTGAACTTGGACAGCTGAGCTTCTTGCAAGAGCTGTATTTGGATCGCAACATGCTTTTTGGGACAATTCCGAAACAGCTAGGTTCACTGAGGAACCTTAGGGTCTTGGATTTGGGTGTTAATAGGCTTACTGGTCCTATACCTCCTGAGCTGGCTGGATTGAGCAGCGTAAGCGTAATAAACTTTCATTCCAATGGGTTGACTGGGAATATACCTTCAGAGCTGGGCAAGCTACAGAATCTTGTTCAGCTGAGGTTGGACAGAAATAGACTGAAAGGATCAATTCCTGGAAGCAATGGTTCTGGTTTTTCTCCTACGGCCAATAGTGGATCCACGGCTCACAATGGGCTATGCCCTTCTCCTCGATTAAATGTTGGAGATTTCTCATACAACTTTCTTGTTGGAAAAATCCCACCGTGCTTGAAGTATCTTCCAAGGTCAAGTTTCCAAGGGAACTGCTTACAGGATGAGTACTCTGTCCGGCAGCGGGCTTTCCAAATTTGTATAAGTGGTTCTCCGGCTGGCCAGCGAGGTGGCGTAAAGGGATTCAAGCATCCCACCTCTGACCATAAACATGAAAGATCACCACAACCAACATGGCTTCTCATTTTAGAAATTTCAACTGGTATTCTTCTGCTTGTATTTGTGATCACTGGTGCAATTACTGCTTCCAGAAGTTGCAAGCTAAAGCCATCGATAAGAATATCCTCGTGGAACAGATCAAAAAGTTGGAGTGATGAGATAACAGTGCTGATCGATTCTGATATGCTGAAAAGCCTGCCAAAGTTAAGTCGCCAAGAGCTTGAAGTAGCTTGTGAGGATTTTAGCAACATTATTGGTTCATCTCCTGAGACAGTAGTGTACAAAGGAACCATGAAGGATGGACCTGAGGTTTCTGTCATATCATTATGTGCCTTTGAAGGTCATTGGACTAGCCAACATGAACTATTTTACCAAAACAAGAGAAAGTGACCCATTCTCCAGGATGCTAGTGTTTGAATACGCATCAAACGGGACCCTGTTTGAGCACCTACACTATGGAGAAGGAGCTCAGTTATCTTGGCTCAGACGAATGAAAATAGCCATTGGCATCGCGCAGGGTCTAAGATACCTGCATACCGAGTTGCAGCCTCCATTTGCTATCTCTGAGCTGAATTCCAACTCTGTATATGTTACTGAAGATTTTACTCCAAAGCTGGTTGATTTTGAGTGCTGGAAAATGATGTTCACCAAACAAAAACATGAGAAGGCTCCTGGCCGCATCAATAACAAATCCTCTTTCCCTGGCCACTTGGATTCTTCAGAGGACAAACAAGCAGACATC-CAAGGCAATACATTTGCTTTTGGAGTGATTTTG-CTGGAG-ATCATCAGTGGACGGCTTCCTTATTGCAAGGACAAAGGCTATTTGATTGACTGGGCCATCAAGTATCTGCAGCAGACAGAGGAGATCGGTAAGCTTGTCGATCCTGAGCTGACCAATGTCAGAACAGAGGATCTCATGGTGATCTGCAGCGTAGTGAGCCGCTGCATCGACCCTGATCCATCCAAGAGACCATCGATGCAGATCATCACAGGAGTTCTGGAGAACGGGATCGACTTGTCGGCAGCCGCCATCCTGAAGGAATCCTCTCTAGCATGGGCTGAGCTCGCCCTGGCGTTGTAGCATACCATTCTTACCGCTGTAAATTCGTCCGTCACATCACACACTAATA-TTTATCTGATCATGGCCATTGCATGCTCGGAATATAGAGGAGCTGAGACGCACGAGCAGGCAGGCACTAGTTCAGTTTGGTCGTGATACTGTATTGACTGTTTTTGACTCATAATGCTGTATGATTTACAGTTGATTGCCGGTATTGCAC-AG-CAGGTGTTTCTTCAATGCCTCACCGGTCTAACGAAATTCCTTTGTTCGCCTCTGCTGGCATACATGTGTAAGTTTGTGGTGCAACCTATTAGGATGAAAACCGGCAT]

[+] EMBL AK065557             [CGCTTCCTCCTCTTTCTCTCTCTACGCCCTCGTCTCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGCATCTTCTTCTTCTTCTTCCAGTGCTCGGCTCTCTCTTTTACTCAACTGCTCACACTCCCCAAACAACCAACCCACCTCCATCTCCATCTCCATGTGGTGCTGAGGCCGGAGCAGCAGCGAGGAATCGGAGCGGTAGCCATGGCGCCGTGAATTCGCGCGAGGACGTGCGATCTCTGAGAGAGGGGGGAGTGTAGTGCTCGAGTGAGTGATTCGGAGGCGGTGCTGCAGCTGCGGCGGCGTTCGGAGATGAGGCATTGTTGGGGCGGTGCTTCCTCCGTCCTCCGGCTCCTCCTCGCGTTGCAGTGCGGGGTGGTGGTGGTGGTGCTGCAGTGCTCGGCGAATGCGTTGGGCAGTGACGTCTCGGCGCTCATCGCGTTCAAGCGCGCAATCATCGGGGACCCCCGGTCGGCGCTCGCGGAATGGAGCGATGCGGACGGGAACGCCTGCGACTGGCACGGGGTGATCTGCTCCTCGCCGCAGGGCTCCGTGATCTCCCTGAAGCTGTCAAACTCGTCGCTGAAGGGATTTATCGCGCCTGAACTTGGACAGCTGAGCTTCTTGCAAGAGCTGTATTTGGATCGCAACATGCTTTTTGGGACAATTCCGAAACAGCTAGGTTCACTGAGGAACCTTAGGGTCTTGGATTTGGGTGTTAATAGGCTTACTGGTCCTATACCTCCTGAGCTGGCTGGATTGAGCAGCGTAAGCGTAATAAACTTTCATTCCAATGGGTTGACTGGGAATATACCTTCAGAGCTGGGCAAGCTACAGAATCTTGTTCAGCTGAGGTTGGACAGAAATAGACTGAAAGGATCAATTCCTGGAAGCAATGGTTCTGGTTTTTCTCCTACGGCCAATAGTGGATCCACGGCTCACAATGGGCTATGCCCTTCTCCTCGATTAAATGTTGGAGATTTCTCATACAACTTTCTTGTTGGAAAAATCCCACCGTGCTTGAAGTATCTTCCAAGGTCAAGTTTCCAAGGGAACTGCTTACAGGATGAGTACTCTGTCCGGCAGCGGGCTTTCCAAATTTGTATAAGTGGTTCTCCGGCTGGCCAGCGAGGTGGCGTAAAGGGATTCAAGCATCCCACCTCTGACCATAAACATGAAAGATCACCACAACCAACATGGCTTCTCATTTTAGAAATTTCAACTGGTATTCTTCTGCTTGTATTTGTGATCACTGGTGCAATTACTGCTTCCAGAAGTTGCAAGCTAAAGCCATCGATAAGAATATCCTCGTGGAACAGATCAAAAAGTTGGAGTGATGAGATAACAGTGCTGATCGATTCTGATATGCTGAAAAGCCTGCCAAAGTTAAGTCGCCAAGAGCTTGAAGTAGCTTGTGAGGATTTTAGCAACATTATTGGTTCATCTCCTGAGACAGTAGTGTACAAAGGAACCATGAAGGATGGACCTGAGGTTTCTGTCATATCATTATGTGCCTTTGAAGGTCATTGGACTAGCCAACATGAACTATTTTACCAAAACAAGAGAAAGTGACCCATTCTCCAGGATGCTAGTGTTTGAATACGCATCAAACGGGACCCTGTTTGAGCACCTACACTATGGAGAAGGAGCTCAGTTATCTTGGCTCAGACGAATGAAAATAGCCATTGGCATCGCGCAGGGTCTAAGATACCTGCATACCGAGTTGCAGCCTCCATTTGCTATCTCTGAGCTGAATTCCAACTCTGTATATGTTACTGAAGATTTTACTCCAAAGCTGGTTGATTTTGAGTGCTGGAAAATGATGTTCACCAAACAAAAACATGAGAAGGCTCCTGGCCGCATCAATAACAAATCCTCTTTCCCTGGCCACTTGGATTCTTCAGAGGACAAACAAGCAGACATC CAAGGCAATACATTTGCTTTTGGAGTGATTTTG CTGGAG ATCATCAGTGGACGGCTTCCTTATTGCAAGGACAAAGGCTATTTGATTGACTGGGCCATCAAGTATCTGCAGCAGACAGAGGAGATCGGTAAGCTTGTCGATCCTGAGCTGACCAATGTCAGAACAGAGGATCTCATGGTGATCTGCAGCGTAGTGAGCCGCTGCATCGACCCTGATCCATCCAAGAGACCATCGATGCAGATCATCACAGGAGTTCTGGAGAACGGGATCGACTTGTCGGCAGCCGCCATCCTGAAGGAATCCTCTCTAGCATGGGCTGAGCTCGCCCTGGCGTTGTAGCATACCATTCTTACCGCTGTAAATTCGTCCGTCACATCACACACTAATA TTTATCTGATCATGGCCATTGCATGCTCGGAATATAGAGGAGCTGAGACGCACGAGCAGGCAGGCACTAGTTCAGTTTGGTCGTGATACTGTATTGACTGTTTTTGACTCATAATGCTGTATGATTTACAGTTGATTGCCGGTATTGCAC AG CAGGTGTTTCTTCAATGCCTCACCGGTCTAACGAAATTCCTTTGTTCGCCTCTGCTGGCATACATGTGTAAGTTTGTGGTGCAACCTATTAGGATGAAAACCGGCAT]
[+] EMBL AU066074             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               CCTGGCCGCATCAATAACAAATCCTCTTTCCCTGCCCACTTGGATTCTTCAGAGGACAAACAAGCAGACATC CAAGGCAATACATTTGCTTTTGGAGTGATTTTG CTGGAG ATCATCAGTGGACGGCTTCCTTATTGCAAGGACAAAGGCTATTTGATTGACTGGGCCATCAAGTATCTGCAGCAGACAGAGGAGATCGGTAAGCTTGTCGATCCTGAGCTGACCAATGTCAGAACAGAGGATCTCATGGTGATCTGCAGCGTAGTGAGCCGCTGCATCGACCCTGATCCATCCAAGAGACCATCGATGCAGATCATCACAGGAGTTCTGGAGAACGGGATCGACTTGTCGGCAGCCGCCATCCTGAAGGAATCCTCTCTAGCATGGGCTGAGCTCGCCCTGGCGTTGTAGCATACCATTCTTACCGCTGTAAATTCGTCCGTCACATCACACACTAATA TTTATCTGATCATGGCCATTGCATGCTCGGAATATAGAGGAGCTGAGACGCACGAGCAGGCAGGCACTAGTTCAGTTTGGTCGTGATACTGTATTGACTGTTTTTGACTCATAATGCTGTATGATTTACAGTTGATTGCCGGTAaaaaaa a                                                                                                             ]
[-] EMBL CB966958             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              tgtAGGGTACTTACAAGCAGACATCTCAAGGCAATACATTTGCTTGTGGAGTGATTTTGTCTGGAGTATCATCAGTGGACGGCTTCCTGATTGCATGGACAAAGGCTATTTGATTGACTGGGCCATCAAGTATCTGCAGCAGACAGAGGAGATCGGTAAGCTTGTCGATCCTGAGCTGACCAATGTCAGAACAGAGGATCTCGAGGTGATCTGCAGCGTAGTGAGCCGCTGCATCGACCCTGATCCATCCAAGAGACCATCGATGCAGATCATCACAGGAGTTCTGGAGAACGAGATCGACTTGTCGGCAGCCGCCATCCTGAAGGAATCCTCTCTAGCATGGGCTGAGCTCGCCCTGGCGTTGTAGCATACCATTCTTACCGCTGTAAATTCGTCCGTCACATCACACACTAATAGTTTATCTGATCATGGCCATTGCATGCTCGGAATATAGAGGAGCTGAGACGCACGAGCAGGCAGGCACTAGTTCAGTTTGGTCGTGATACTGTACTGACTGTTTTTGACTCATAATGCTGTATGATTTACAGTTGATTGCCGGTATTGCACTAGCCAGG                                                                                                       ]
[+] EMBL CA764863             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           GGCAATACATTTGCTTTTGGAGTGATTNTG CTGGAG ATC TCAGTGGACGGCTTCCTTATTGCAAGGACAAAGGCTATTTGATTGACTGGGCCGTCAAGTATCTGCAGCAGACAGAGGAGATCGGTAAGCTTGTCGATCCTGAGCTGACCAATGTCAGAACAGAGGATCTCGAGGTGATCTGCAGCGTAGTGAGCCGCTGCATCGACCCTGATCCATCCAAGAGACCATCGATGCAGATCATCACAGGAGTTNTGGAGAACGAGATCGACTTGNCGGCAGCCGCCATCCTGAAGGAATCCTCTCTAGCATGGGCTGAGCTCGCCCTGGCGTTGNANCATACCATTCTTACCGCTGTAAATTCGTCCGTCACATCACACACTAATA TTTATCTGATCATGGCCATTGCATGCTCGGAATATAGAGGAGCTGAGACGCACGAGCAGGCAGGCACTAGTTCAGTTTGGTCGTGATACTGTACTGACTGTTTTTGACTCATAATGCTGTATGATTTACAGTTGATTGCCGNNATTGCA                                                                                                                ]
[+] EMBL AK062055             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          TTTGGAGTGATTTTG CTGGAG ATCATCAGTGGACGGCTTCCTTATTGCAAGGACAAAGGCTATTTGATTGACTGGGCCATCAAGTATCTGCAGCAGACAGAGGAGATCGGTAAGCTTGTCGATCCTGAGCTGACCAATGTCAGAACAGAGGATCTCATGGTGATCTGCAGCGTAGTGAGTCGCTGCATCGACCCTGATCCATCCAAGAGACCATCGATGCAGATCATCACAGGAGTTCTGGAGAACGGGATCGACTTGTCGGCAGCCGCCATCCTGAAGGAATCCTCTCTAGCATGGGCTGAGCTCGCCCTGGCGTTGTAGCATACCATTCTTACCGCTGTAAATTCGTCCGTCACATCACACACTAATA TTTATCTGATCATGGCCATTGCGTGCTCGGAATATAGAGGAGCTGAGACGCACGAGCAGGCAGGCACTAGTTCAGTTTGGTCGTGATACTGTATTGACTGTTTTTGACTCATAATGCTGTATGATTTACAGTTGATTG                                                                                                                           ]


>consensus_9444#0 CGCTTCCTCCTCTTTCTCTCTCTACGCCCTCGTCTCCCTCTCTCTCTCTCTCTCTCTCTC TCTCTCTGCATCTTCTTCTTCTTCTTCCAGTGCTCGGCTCTCTCTTTTACTCAACTGCTC ACACTCCCCAAACAACCAACCCACCTCCATCTCCATCTCCATGTGGTGCTGAGGCCGGAG CAGCAGCGAGGAATCGGAGCGGTAGCCATGGCGCCGTGAATTCGCGCGAGGACGTGCGAT CTCTGAGAGAGGGGGGAGTGTAGTGCTCGAGTGAGTGATTCGGAGGCGGTGCTGCAGCTG CGGCGGCGTTCGGAGATGAGGCATTGTTGGGGCGGTGCTTCCTCCGTCCTCCGGCTCCTC CTCGCGTTGCAGTGCGGGGTGGTGGTGGTGGTGCTGCAGTGCTCGGCGAATGCGTTGGGC AGTGACGTCTCGGCGCTCATCGCGTTCAAGCGCGCAATCATCGGGGACCCCCGGTCGGCG CTCGCGGAATGGAGCGATGCGGACGGGAACGCCTGCGACTGGCACGGGGTGATCTGCTCC TCGCCGCAGGGCTCCGTGATCTCCCTGAAGCTGTCAAACTCGTCGCTGAAGGGATTTATC GCGCCTGAACTTGGACAGCTGAGCTTCTTGCAAGAGCTGTATTTGGATCGCAACATGCTT TTTGGGACAATTCCGAAACAGCTAGGTTCACTGAGGAACCTTAGGGTCTTGGATTTGGGT GTTAATAGGCTTACTGGTCCTATACCTCCTGAGCTGGCTGGATTGAGCAGCGTAAGCGTA ATAAACTTTCATTCCAATGGGTTGACTGGGAATATACCTTCAGAGCTGGGCAAGCTACAG AATCTTGTTCAGCTGAGGTTGGACAGAAATAGACTGAAAGGATCAATTCCTGGAAGCAAT GGTTCTGGTTTTTCTCCTACGGCCAATAGTGGATCCACGGCTCACAATGGGCTATGCCCT TCTCCTCGATTAAATGTTGGAGATTTCTCATACAACTTTCTTGTTGGAAAAATCCCACCG TGCTTGAAGTATCTTCCAAGGTCAAGTTTCCAAGGGAACTGCTTACAGGATGAGTACTCT GTCCGGCAGCGGGCTTTCCAAATTTGTATAAGTGGTTCTCCGGCTGGCCAGCGAGGTGGC GTAAAGGGATTCAAGCATCCCACCTCTGACCATAAACATGAAAGATCACCACAACCAACA TGGCTTCTCATTTTAGAAATTTCAACTGGTATTCTTCTGCTTGTATTTGTGATCACTGGT GCAATTACTGCTTCCAGAAGTTGCAAGCTAAAGCCATCGATAAGAATATCCTCGTGGAAC AGATCAAAAAGTTGGAGTGATGAGATAACAGTGCTGATCGATTCTGATATGCTGAAAAGC CTGCCAAAGTTAAGTCGCCAAGAGCTTGAAGTAGCTTGTGAGGATTTTAGCAACATTATT GGTTCATCTCCTGAGACAGTAGTGTACAAAGGAACCATGAAGGATGGACCTGAGGTTTCT GTCATATCATTATGTGCCTTTGAAGGTCATTGGACTAGCCAACATGAACTATTTTACCAA AACAAGAGAAAGTGACCCATTCTCCAGGATGCTAGTGTTTGAATACGCATCAAACGGGAC CCTGTTTGAGCACCTACACTATGGAGAAGGAGCTCAGTTATCTTGGCTCAGACGAATGAA AATAGCCATTGGCATCGCGCAGGGTCTAAGATACCTGCATACCGAGTTGCAGCCTCCATT TGCTATCTCTGAGCTGAATTCCAACTCTGTATATGTTACTGAAGATTTTACTCCAAAGCT GGTTGATTTTGAGTGCTGGAAAATGATGTTCACCAAACAAAAACATGAGAAGGCTCCTGG CCGCATCAATAACAAATCCTCTTTCCCTGGCCACTTGGATTCTTCAGAGGACAAACAAGC AGACATCCAAGGCAATACATTTGCTTTTGGAGTGATTTTGCTGGAGATCATCAGTGGACG GCTTCCTTATTGCAAGGACAAAGGCTATTTGATTGACTGGGCCATCAAGTATCTGCAGCA GACAGAGGAGATCGGTAAGCTTGTCGATCCTGAGCTGACCAATGTCAGAACAGAGGATCT CATGGTGATCTGCAGCGTAGTGAGCCGCTGCATCGACCCTGATCCATCCAAGAGACCATC GATGCAGATCATCACAGGAGTTCTGGAGAACGGGATCGACTTGTCGGCAGCCGCCATCCT GAAGGAATCCTCTCTAGCATGGGCTGAGCTCGCCCTGGCGTTGTAGCATACCATTCTTAC CGCTGTAAATTCGTCCGTCACATCACACACTAATATTTATCTGATCATGGCCATTGCATG CTCGGAATATAGAGGAGCTGAGACGCACGAGCAGGCAGGCACTAGTTCAGTTTGGTCGTG ATACTGTATTGACTGTTTTTGACTCATAATGCTGTATGATTTACAGTTGATTGCCGGTAT TGCACAGCAGGTGTTTCTTCAATGCCTCACCGGTCTAACGAAATTCCTTTGTTCGCCTCT GCTGGCATACATGTGTAAGTTTGTGGTGCAACCTATTAGGATGAAAACCGGCAT



consensusID : consensus_9444#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 675
fasta sequence
                              [GTGGCGTAAAGGGATTCAAGCATCCCACCTCTGACCATAAACATGAAAGATCACCACAACCAACATGGCTTCTCATTTTAGAAATTTCAACTGGTATTCTTCTGCTTGTATTTGTGATCACTGGTGCAATTACTGCTTCCAGAAGTTGCAAGCTAAAGCCATCGATAAGAATATCCTCGTGGAACAGATCAAAAAGTTGGAGTGATGAGATAACAGTGCTGATCGATTCTGATATGCTGAAAAGCCTGCCAAAGTTAAGTCGCCAAGAGCTTGAAGTAGCTTGTGAGGATTTTAGCAACATTATTGGTTCATCTCCTGAGACAGTAGTGTACAAAGGAACCATGAAGGATGGACCTGAGGTTTCTGTCATATCATTATGTGCCTTTGAAGGTCATTGGACTAGCCAACATGAACTATTTTACCAAAACAAGGTTATTGACCTGGCAAGGTTGAATCATGAGAACATAGCAAAATTTCTGGGCTATTGCAGAGAAAGTGACCCATTCTCCAGGATGCTAGTGTTTGAATACGCATCAAACGGGACCCTGTTTGAGCACCTACACTATGGAGAAGGAGCTCAGTTATCTTGGCTCAGACGAATGAAAATAGCCATTGGCATCGCGCAGGGTCTAAGATACCTGCATACCGAGTTGCAGCCTCCATTTGCTATCTCTG]

[+] EMBL CB001001             [GTGGCGTAAAGGGATTCAAGCATCCCACCTCTGACCATAAACATGAAAGATCACCACAACCAACATGGCTTCTCATTTTAGAAATTTCAACTGGTATTCTTCTGCTTGTATTTGTGATCACTGGTGCAATTACTGCTTCCAGAAGTTGCAAGCTAAAGCCATCGATAAGAATATCCTCGTGGAACAGATCAAAAAGTTGGAGTGATGAGATAACAGTGCTGATCGATTCTGATATGCTGAAAAGCCTGCCAAAGTTAAGTCGCCAAGAGCTTGAAGTAGCTTGTGAGGATTTTAGCAACATTATTGGTTCATCTCCTGAGACAGTAGTGTACAAAGGAACCATGAAGGATGGACCTGAGGTTTCTGTCATATCATTATGTGCCTTTGAAGGTCATTGGACTAGCCAACATGAACTATTTTACCAAAACAAGGTTATTGACCTGGCAAGGTTGAATCATGAGAACATAGCAAAATTTCTGGGCTATTGCAGAGAAAGTGACCCATTCTCCAGGATGCTAGTGTTTGAATACGCATCAAACGGGACCCTGTTTGAGCACCTACACTATGGAGAAGGAGCTCAGTTATCTTGGCTCAGACGAATGAAAATAGCCATTGGCATCGCGCAGGGTCTAAGATACCTGCATACCGAGTTGCAGCCTCCATTTGCTATCTCTG]


>consensus_9444#1 GTGGCGTAAAGGGATTCAAGCATCCCACCTCTGACCATAAACATGAAAGATCACCACAAC CAACATGGCTTCTCATTTTAGAAATTTCAACTGGTATTCTTCTGCTTGTATTTGTGATCA CTGGTGCAATTACTGCTTCCAGAAGTTGCAAGCTAAAGCCATCGATAAGAATATCCTCGT GGAACAGATCAAAAAGTTGGAGTGATGAGATAACAGTGCTGATCGATTCTGATATGCTGA AAAGCCTGCCAAAGTTAAGTCGCCAAGAGCTTGAAGTAGCTTGTGAGGATTTTAGCAACA TTATTGGTTCATCTCCTGAGACAGTAGTGTACAAAGGAACCATGAAGGATGGACCTGAGG TTTCTGTCATATCATTATGTGCCTTTGAAGGTCATTGGACTAGCCAACATGAACTATTTT ACCAAAACAAGGTTATTGACCTGGCAAGGTTGAATCATGAGAACATAGCAAAATTTCTGG GCTATTGCAGAGAAAGTGACCCATTCTCCAGGATGCTAGTGTTTGAATACGCATCAAACG GGACCCTGTTTGAGCACCTACACTATGGAGAAGGAGCTCAGTTATCTTGGCTCAGACGAA TGAAAATAGCCATTGGCATCGCGCAGGGTCTAAGATACCTGCATACCGAGTTGCAGCCTC CATTTGCTATCTCTG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9444#0      CGCTTCCTCCTCTTTCTCTCTCTACGCCCTCGTCTCCCTCTCTCTCTCTCTCTCTCTCTC 60
consensus_9444#1      ------------------------------------------------------------
                                                                                  

consensus_9444#0      TCTCTCTGCATCTTCTTCTTCTTCTTCCAGTGCTCGGCTCTCTCTTTTACTCAACTGCTC 120
consensus_9444#1      ------------------------------------------------------------
                                                                                  

consensus_9444#0      ACACTCCCCAAACAACCAACCCACCTCCATCTCCATCTCCATGTGGTGCTGAGGCCGGAG 180
consensus_9444#1      ------------------------------------------------------------
                                                                                  

consensus_9444#0      CAGCAGCGAGGAATCGGAGCGGTAGCCATGGCGCCGTGAATTCGCGCGAGGACGTGCGAT 240
consensus_9444#1      ------------------------------------------------------------
                                                                                  

consensus_9444#0      CTCTGAGAGAGGGGGGAGTGTAGTGCTCGAGTGAGTGATTCGGAGGCGGTGCTGCAGCTG 300
consensus_9444#1      ------------------------------------------------------------
                                                                                  

consensus_9444#0      CGGCGGCGTTCGGAGATGAGGCATTGTTGGGGCGGTGCTTCCTCCGTCCTCCGGCTCCTC 360
consensus_9444#1      ------------------------------------------------------------
                                                                                  

consensus_9444#0      CTCGCGTTGCAGTGCGGGGTGGTGGTGGTGGTGCTGCAGTGCTCGGCGAATGCGTTGGGC 420
consensus_9444#1      ------------------------------------------------------------
                                                                                  

consensus_9444#0      AGTGACGTCTCGGCGCTCATCGCGTTCAAGCGCGCAATCATCGGGGACCCCCGGTCGGCG 480
consensus_9444#1      ------------------------------------------------------------
                                                                                  

consensus_9444#0      CTCGCGGAATGGAGCGATGCGGACGGGAACGCCTGCGACTGGCACGGGGTGATCTGCTCC 540
consensus_9444#1      ------------------------------------------------------------
                                                                                  

consensus_9444#0      TCGCCGCAGGGCTCCGTGATCTCCCTGAAGCTGTCAAACTCGTCGCTGAAGGGATTTATC 600
consensus_9444#1      ------------------------------------------------------------
                                                                                  

consensus_9444#0      GCGCCTGAACTTGGACAGCTGAGCTTCTTGCAAGAGCTGTATTTGGATCGCAACATGCTT 660
consensus_9444#1      ------------------------------------------------------------
                                                                                  

consensus_9444#0      TTTGGGACAATTCCGAAACAGCTAGGTTCACTGAGGAACCTTAGGGTCTTGGATTTGGGT 720
consensus_9444#1      ------------------------------------------------------------
                                                                                  

consensus_9444#0      GTTAATAGGCTTACTGGTCCTATACCTCCTGAGCTGGCTGGATTGAGCAGCGTAAGCGTA 780
consensus_9444#1      ------------------------------------------------------------
                                                                                  

consensus_9444#0      ATAAACTTTCATTCCAATGGGTTGACTGGGAATATACCTTCAGAGCTGGGCAAGCTACAG 840
consensus_9444#1      ------------------------------------------------------------
                                                                                  

consensus_9444#0      AATCTTGTTCAGCTGAGGTTGGACAGAAATAGACTGAAAGGATCAATTCCTGGAAGCAAT 900
consensus_9444#1      ------------------------------------------------------------
                                                                                  

consensus_9444#0      GGTTCTGGTTTTTCTCCTACGGCCAATAGTGGATCCACGGCTCACAATGGGCTATGCCCT 960
consensus_9444#1      ------------------------------------------------------------
                                                                                  

consensus_9444#0      TCTCCTCGATTAAATGTTGGAGATTTCTCATACAACTTTCTTGTTGGAAAAATCCCACCG 1020
consensus_9444#1      ------------------------------------------------------------
                                                                                  

consensus_9444#0      TGCTTGAAGTATCTTCCAAGGTCAAGTTTCCAAGGGAACTGCTTACAGGATGAGTACTCT 1080
consensus_9444#1      ------------------------------------------------------------
                                                                                  

consensus_9444#0      GTCCGGCAGCGGGCTTTCCAAATTTGTATAAGTGGTTCTCCGGCTGGCCAGCGAGGTGGC 1140
consensus_9444#1      -------------------------------------------------------GTGGC 5
                                                                             *****

consensus_9444#0      GTAAAGGGATTCAAGCATCCCACCTCTGACCATAAACATGAAAGATCACCACAACCAACA 1200
consensus_9444#1      GTAAAGGGATTCAAGCATCCCACCTCTGACCATAAACATGAAAGATCACCACAACCAACA 65
                      ************************************************************

consensus_9444#0      TGGCTTCTCATTTTAGAAATTTCAACTGGTATTCTTCTGCTTGTATTTGTGATCACTGGT 1260
consensus_9444#1      TGGCTTCTCATTTTAGAAATTTCAACTGGTATTCTTCTGCTTGTATTTGTGATCACTGGT 125
                      ************************************************************

consensus_9444#0      GCAATTACTGCTTCCAGAAGTTGCAAGCTAAAGCCATCGATAAGAATATCCTCGTGGAAC 1320
consensus_9444#1      GCAATTACTGCTTCCAGAAGTTGCAAGCTAAAGCCATCGATAAGAATATCCTCGTGGAAC 185
                      ************************************************************

consensus_9444#0      AGATCAAAAAGTTGGAGTGATGAGATAACAGTGCTGATCGATTCTGATATGCTGAAAAGC 1380
consensus_9444#1      AGATCAAAAAGTTGGAGTGATGAGATAACAGTGCTGATCGATTCTGATATGCTGAAAAGC 245
                      ************************************************************

consensus_9444#0      CTGCCAAAGTTAAGTCGCCAAGAGCTTGAAGTAGCTTGTGAGGATTTTAGCAACATTATT 1440
consensus_9444#1      CTGCCAAAGTTAAGTCGCCAAGAGCTTGAAGTAGCTTGTGAGGATTTTAGCAACATTATT 305
                      ************************************************************

consensus_9444#0      GGTTCATCTCCTGAGACAGTAGTGTACAAAGGAACCATGAAGGATGGACCTGAGGTTTCT 1500
consensus_9444#1      GGTTCATCTCCTGAGACAGTAGTGTACAAAGGAACCATGAAGGATGGACCTGAGGTTTCT 365
                      ************************************************************

consensus_9444#0      GTCATATCATTATGTGCCTTTGAAGGTCATTGGACTAGCCAACATGAACTATTTTACCAA 1560
consensus_9444#1      GTCATATCATTATGTGCCTTTGAAGGTCATTGGACTAGCCAACATGAACTATTTTACCAA 425
                      ************************************************************

consensus_9444#0      AACAAG------------------------------------------------------ 1566
consensus_9444#1      AACAAGGTTATTGACCTGGCAAGGTTGAATCATGAGAACATAGCAAAATTTCTGGGCTAT 485
                      ******                                                      

consensus_9444#0      -----AGAAAGTGACCCATTCTCCAGGATGCTAGTGTTTGAATACGCATCAAACGGGACC 1621
consensus_9444#1      TGCAGAGAAAGTGACCCATTCTCCAGGATGCTAGTGTTTGAATACGCATCAAACGGGACC 545
                           *******************************************************

consensus_9444#0      CTGTTTGAGCACCTACACTATGGAGAAGGAGCTCAGTTATCTTGGCTCAGACGAATGAAA 1681
consensus_9444#1      CTGTTTGAGCACCTACACTATGGAGAAGGAGCTCAGTTATCTTGGCTCAGACGAATGAAA 605
                      ************************************************************

consensus_9444#0      ATAGCCATTGGCATCGCGCAGGGTCTAAGATACCTGCATACCGAGTTGCAGCCTCCATTT 1741
consensus_9444#1      ATAGCCATTGGCATCGCGCAGGGTCTAAGATACCTGCATACCGAGTTGCAGCCTCCATTT 665
                      ************************************************************

consensus_9444#0      GCTATCTCTGAGCTGAATTCCAACTCTGTATATGTTACTGAAGATTTTACTCCAAAGCTG 1801
consensus_9444#1      GCTATCTCTG-------------------------------------------------- 675
                      **********                                                  

consensus_9444#0      GTTGATTTTGAGTGCTGGAAAATGATGTTCACCAAACAAAAACATGAGAAGGCTCCTGGC 1861
consensus_9444#1      ------------------------------------------------------------
                                                                                  

consensus_9444#0      CGCATCAATAACAAATCCTCTTTCCCTGGCCACTTGGATTCTTCAGAGGACAAACAAGCA 1921
consensus_9444#1      ------------------------------------------------------------
                                                                                  

consensus_9444#0      GACATCCAAGGCAATACATTTGCTTTTGGAGTGATTTTGCTGGAGATCATCAGTGGACGG 1981
consensus_9444#1      ------------------------------------------------------------
                                                                                  

consensus_9444#0      CTTCCTTATTGCAAGGACAAAGGCTATTTGATTGACTGGGCCATCAAGTATCTGCAGCAG 2041
consensus_9444#1      ------------------------------------------------------------
                                                                                  

consensus_9444#0      ACAGAGGAGATCGGTAAGCTTGTCGATCCTGAGCTGACCAATGTCAGAACAGAGGATCTC 2101
consensus_9444#1      ------------------------------------------------------------
                                                                                  

consensus_9444#0      ATGGTGATCTGCAGCGTAGTGAGCCGCTGCATCGACCCTGATCCATCCAAGAGACCATCG 2161
consensus_9444#1      ------------------------------------------------------------
                                                                                  

consensus_9444#0      ATGCAGATCATCACAGGAGTTCTGGAGAACGGGATCGACTTGTCGGCAGCCGCCATCCTG 2221
consensus_9444#1      ------------------------------------------------------------
                                                                                  

consensus_9444#0      AAGGAATCCTCTCTAGCATGGGCTGAGCTCGCCCTGGCGTTGTAGCATACCATTCTTACC 2281
consensus_9444#1      ------------------------------------------------------------
                                                                                  

consensus_9444#0      GCTGTAAATTCGTCCGTCACATCACACACTAATATTTATCTGATCATGGCCATTGCATGC 2341
consensus_9444#1      ------------------------------------------------------------
                                                                                  

consensus_9444#0      TCGGAATATAGAGGAGCTGAGACGCACGAGCAGGCAGGCACTAGTTCAGTTTGGTCGTGA 2401
consensus_9444#1      ------------------------------------------------------------
                                                                                  

consensus_9444#0      TACTGTATTGACTGTTTTTGACTCATAATGCTGTATGATTTACAGTTGATTGCCGGTATT 2461
consensus_9444#1      ------------------------------------------------------------
                                                                                  

consensus_9444#0      GCACAGCAGGTGTTTCTTCAATGCCTCACCGGTCTAACGAAATTCCTTTGTTCGCCTCTG 2521
consensus_9444#1      ------------------------------------------------------------
                                                                                  

consensus_9444#0      CTGGCATACATGTGTAAGTTTGTGGTGCAACCTATTAGGATGAAAACCGGCAT 2574
consensus_9444#1      -----------------------------------------------------
                                                                           




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)