cluster # 9457

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 9457 cluster # 9457 Sequences # 6 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9457#0 length = 1571 sequences # 6
consensusID : consensus_9457#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1571
fasta sequence
                              [ATCCCAACCCTCGTTCCATTCCATCCCACCCCCCCGCCACTACCATCCAAGGGCGCGCCGAGGCGCCATGGACGACGACATCGACAGCAGCTGCTCCACCCCATTCGCCAGCGCGCCGTCCAGCCCCGGCAGGTCGCCTGCCACCGGCGGCGGCTACTTCTTCAGCGCGCCGGCCAGCCCCATCCACCACCTGCTCCTCTCCTCCTCCTCGGTTGCCTCCGGTGTGGTGTCGGGGGCGGGGTATGGCGGCGTGGGCGATGCGGAGTTCGAGTTCGGCGGCCCCGGCGGGCCCATGATCTCCGCCGACGAGCTCTTCCACAACGGCCAGATCCGGCCGCTCACCCTGCCCCCGCTCCCGGATCTCGACCCCGGCAGCGACGACGACGACGGCGGCGGCGGCGACTTCCGCCCCGGGCCGGTGCGAGGCCGCGAGCTGACGCTGCGGAGCGGGTCCGTGCACCGCCGCACGCGGTCCATGTCGCCGCTCCGCGGCGCGTCCCCGCGGCTCAAGCTGCTCAATGCGCTCGTCCCCGCCCCGGATCTTGGCTCCGAGCCAACTCCATCGCACTCGGCTGGGTCGGAGGAGGCCACGCCACCGGTCACCGCCTCGTCACGCTCGTCCTCCTCCTCCTCGACGTCCTCGTCCTCGTCCTCCTCGTCGTCCGCCCGCGGGTCACGGCGGTGGGTGTTCCTCAAGGACATGCTCCTCCACCGCAGCAAGAGCGAGCCAGGCGGAGCCCACGCGCACGACGCCCCCGCCAAGCCCGAGAAGGCGTGGCAGTTCTCGCCCTCGTGGGCATCATCGAGAGACAGGATCGCCGCAAAGCTCCGCGCGGCGAGGTCACCACTACCACCACAGCCACAATCGGAAGCGTCGTCGGACGCCGGCGGCGGCG-AAG-AGGCGCAGGCGACGCG-GGGGCGCGCG-AGGGGCGGCAAGGGCAGGCGGCGCTCGAGCACGGTCGCGGCGGCGCACGAGCGTCTCTACGCGGCGCGGAACCGGGCGCAGGCGGAGGAGATGCGGCGGCGCACGTTCCTCCCCTACCGGCAGGGCCTCCTCGGCTGCCTCGGCTTCAGCTCCCGCGGTTACGGCGCGCTCCACGGCTTCACAAAAACCCTCAACCCCGTCTTCTCCCGGTAAAAACCAAAGGCAAACGCCTCATCGGCCAAAAAAACTCCAAAATAGAGAGCAAATGGGAAGAGCTTAACCAAGTTCTTCGCTGTTGCCCGTTAATTAATTAATATTATTATTTCCTGTGTAAGCGAAGCTTGTACTACTTTGTTTTTTTTTCTTTTCCTTTTTCTGCCTTCGATTTGTGCTTGGGTTTTGTATAGGCAGGCAGCGTGAGAGGGATAACAGGATTCCTCCCTTCGTTCGGAGGCGTTGGTGGTAGTAGTAGTTGTCACAGGTCAGTCACATCAACTGGAAACATCAGCGGTTGGTAAATGTGGCGCGAAGCAGAATGCCTGGTGATTTTTTTCCCCTTCCCCTACCCATTCTTGTGTGCATGGAACTATCATCTCAACCCTGTACTACTCGTAGTAAGTGGAGTATATACACGTTNTACTAAAAA]

[+] EMBL AK071041             [ATCCCAACCCTCGTTCCATTCCATCCCACCCCCCCGCCACTACCATCCAAGGGCGCGCCGAGGCGCCATGGACGACGACATCGACAGCAGCTGCTCCACCCCATTCGCCAGCGCGCCGTCCAGCCCCGGCAGGTCGCCTGCCACCGGCGGCGGCTACTTCTTCAGCGCGCCGGCCAGCCCCATCCACCACCTGCTCCTCTCCTCCTCCTCGGTTGCCTCCGGTGTGGTGTCGGGGGCGGGGTATGGCGGCGTGGGCGATGCGGAGTTCGAGTTCGGCGGCCCCGGCGGGCCCATGATCTCCGCCGACGAGCTCTTCCACAACGGCCAGATCCGGCCGCTCACCCTGCCCCCGCTCCCGGATCTCGACCCCGGCAGCGACGACGACGACGGCGGCGGCGGCGACTTCCGCCCCGGGCCGGTGCGAGGCCGCGAGCTGACGCTGCGGAGCGGGTCCGTGCACCGCCGCACGCGGTCCATGTCGCCGCTCCGCGGCGCGTCCCCGCGGCTCAAGCTGCTCAATGCGCTCGTCCCCGCCCCGGATCTTGGCTCCGAGCCAACTCCATCGCACTCGGCTGGGTCGGAGGAGGCCACGCCACCGGTCACCGCCTCGTCACGCTCGTCCTCCTCCTCCTCGACGTCCTCGTCCTCGTCCTCCTCGTCGTCCGCCCGCGGGTCACGGCGGTGGGTGTTCCTCAAGGACATGCTCCTCCACCGCAGCAAGAGCGAGCCAGGCGGAGCCCACGCGCACGACGCCCCCGCCAAGCCCGAGAAGGCGTGGCAGTTCTCGCCCTCGTGGGCATCATCGAGAGACAGGATCGCCGCAAAGCTCCGCGCGGCGAGGTCACCACTACCACCACAGCCACAATCGGAAGCGTCGTCAGACGCCGGCGGCGGCG AAG AGGCGCAGGCGACGCG GGGGCGCGCG AGGGGCGGCAAGGGCAGGCGGCGCTCGAGCACGGTCGCGGCGGCGCACGAGCGTCTCTACGCGGCGCGGAACCGGGCGCAGGCGGAGGAGATGCGGCGGCGCACGTTCCTCCCCTACCGGCAGGGCCTCCTCGGCTGCCTCGGCTTCAGCTCCCGCGGTTACGGCGCGCTCCACGGCTTCACAAAAACCCTCAACCCCGTCTTCTCCCGGTAAAAACCAAAGGCAAACGCCTCATCGGCCAAAAAAACTCCAAAATAGAGAGCAAATGGGAAGAGCTTAACCAAGTTCTTCGCTGTTGCCCGTTAATTAATTAATATTATTATTTCCTGTGTAAGCGAAGCTTGTACTACTTTGTTTTTTTTTCTTTTCCTTTTTCTGCCTTCGATTTGTGCTTGGGTTTTGTATAGGCAGGCAGCGTGAGAGGGATAACAGGATTCCTCCCTTCGTTCGGAGGCGTTGGTGGTAGTAGTAGTTGTCACAGGTCAGTCACATCAACTGGAAACATCAGCGGTTGGTAAATGTGGCGCGAAGCAGAATGCCTGGTGATTTTTTTCCCCTTCCCCTACCCATTCTTGTGTGCATGGAACTATCATCTCAACCCTGTACTACTCGTAGTAAGTGGAGTATATAC               ]
[+] EMBL C26765               [                  TTCCATCCCACCCCCCCGCCACTACCATCCAAGGGCGCGCCGAGGCG CATGGACGACGACATCGACAGCAGCTGCTCCACCCCATTCGCCAGCGCGCCGTCCAGCCCCGGCAGGTCGCCTGCCACCGGCGGCGGCTACTTCTTCAGCGCGCCGGCCAGCCCCATCCACCACCTGCTCCTCTCCTCCTCCTCGGTTGCCTCCGGTGTGGTGTCGGGGGCGGGGTATGGCGGCGTGGGCGATGCGGAGTTCGAGTTCGGCGGTCCCGGNGGGCCCATGATCTCCGCCGACGAGCTCTTCCACA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL AU068906             [                                                                                                                                                                                 cnantnCCACCACCTGCTCCTCTCCTCCTCCTCGGTTGCCTCCGGTGTGGTGTCGGGGGCGGGGTATGGCGGCGTGGGCNATGCGGAGTTCGAGTTCGGCGGCCCCGGCGGGCCCATAATCTCCGCCGACGAGCTCTTCCACAACGGCCAGATCCGGCCGCTCACCCTGCCCCCGCTCCCGGATCTCGACCCCGGCAGCAACGACGACGACGGCGGCGGCGGCGACTTCCGCCCCGGGCCGGTGCNAGGNCGCAAGCTGACGCTNCGGAGGGGGTCCGTGCACCGCCGCACGCGGgtc                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL C27389               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         CCAACTCCATCGCACTCGGCTGGGTCGGAGGAGGCCACGCCACCGGTCACCGCCTCGTCACGCTCGTCCTCCTCCTCCTCGACGTCCTCGTCCTCGTCCTCCTCGTCGTCCGCCCGCGGGTCACGGCGGTGGGTGTTCCTCAAGGACATGCTCCTCCACCGCAGCAAGAGCGAGCCAGGCGGANCCAACGCGCACGACGCCCCCGCCAAGCCCGAGAAGGCGTGGCAGTTCTCGCCCTCGTGGGCATCATCGAGAGACAGGATCGCCGCAAAGCTCCGCGCGGCGAGGTCACCACTACCACCACAGCCACAATCGGAAGCNTCGTCGGACGCNGGCGG GGCGAAAGAAGGCGCAGGCGACGCGNGGGGCGCGCGAATGGGCGGCAAGGGCAGGCGGCGgt                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL AU181504             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     CAAAGCTCCGCGCGGCGAGGTCACCACTACCACCACAGCCACAATCGGAAGCGTCGTCGGACGCCGGCGGCGGCG AAG AGGCGCAGGCGACGCG GGGGCGCGCG AGGGGCGGCAAGGGCAGGCGGCGCTCGAGCACGGTCGCGGCGGCGCACGAGCGTCTCTACGCGGCGCGGAACCGGGCGCAGGCGGAGGAGATGCGGCGGCGCACGTTCCTCCCCTACCGGCAGGGCCTCCTCGGCTGCCTCGGCTTCAGCTCCCGCGGTTACGGCGCGCTCCACGGCTTCACAAAAACCCTCAACCCCGTCTTCTCCCGGTAAAAACCAAAGGCAAACGCCTCATCGGCCAAAAAAACTCCAAAATAGAGAGCAAATGGGAAGAGCTTAACCAAGTTCTTCGCTGTTGCCCGTTAATTAATTAATATTATTATTTCCTGTGTAAaaa                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL AU166880             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GGTAAAAACCAAAGGCAAACGCCTCATCGGCCAAAAAAACTCCAAAATAGAGAGCAAATGGGAAGAGCTTAACCAAGTTNTTCGCTGTTGCCCGTTAATTAATTAATATTATTATTTCCTGTGTAAGCGAAGCTTGTACTACTTTGTTTTTTTTTCTTTTCCTTTTTCTGCCTTCGATTTGTGCTTGGGTTTTGTATAGGCAGGCAGCGTGAGAGGGATAACAGGATTCCTCCCTTCGTTCGGAGGCGTTGGTGGTAGTAGTAGTTGTCACAGGTCAGTCACATCAACTGGAAACATCAGCGGTTGGTAAATGTGGCGCGAAGCAGAATGCCTGGTGATTTTTTTCCCCTTCCCCTACCCATTCTTGTGTGCATGGAACTATCATCTCAACCCTGTACTACTCGTAGTAAGTGGAGTATATACACGTTNTACTAAAAA]




>consensus_9457#0
ATCCCAACCCTCGTTCCATTCCATCCCACCCCCCCGCCACTACCATCCAAGGGCGCGCCG
AGGCGCCATGGACGACGACATCGACAGCAGCTGCTCCACCCCATTCGCCAGCGCGCCGTC
CAGCCCCGGCAGGTCGCCTGCCACCGGCGGCGGCTACTTCTTCAGCGCGCCGGCCAGCCC
CATCCACCACCTGCTCCTCTCCTCCTCCTCGGTTGCCTCCGGTGTGGTGTCGGGGGCGGG
GTATGGCGGCGTGGGCGATGCGGAGTTCGAGTTCGGCGGCCCCGGCGGGCCCATGATCTC
CGCCGACGAGCTCTTCCACAACGGCCAGATCCGGCCGCTCACCCTGCCCCCGCTCCCGGA
TCTCGACCCCGGCAGCGACGACGACGACGGCGGCGGCGGCGACTTCCGCCCCGGGCCGGT
GCGAGGCCGCGAGCTGACGCTGCGGAGCGGGTCCGTGCACCGCCGCACGCGGTCCATGTC
GCCGCTCCGCGGCGCGTCCCCGCGGCTCAAGCTGCTCAATGCGCTCGTCCCCGCCCCGGA
TCTTGGCTCCGAGCCAACTCCATCGCACTCGGCTGGGTCGGAGGAGGCCACGCCACCGGT
CACCGCCTCGTCACGCTCGTCCTCCTCCTCCTCGACGTCCTCGTCCTCGTCCTCCTCGTC
GTCCGCCCGCGGGTCACGGCGGTGGGTGTTCCTCAAGGACATGCTCCTCCACCGCAGCAA
GAGCGAGCCAGGCGGAGCCCACGCGCACGACGCCCCCGCCAAGCCCGAGAAGGCGTGGCA
GTTCTCGCCCTCGTGGGCATCATCGAGAGACAGGATCGCCGCAAAGCTCCGCGCGGCGAG
GTCACCACTACCACCACAGCCACAATCGGAAGCGTCGTCGGACGCCGGCGGCGGCGAAGA
GGCGCAGGCGACGCGGGGGCGCGCGAGGGGCGGCAAGGGCAGGCGGCGCTCGAGCACGGT
CGCGGCGGCGCACGAGCGTCTCTACGCGGCGCGGAACCGGGCGCAGGCGGAGGAGATGCG
GCGGCGCACGTTCCTCCCCTACCGGCAGGGCCTCCTCGGCTGCCTCGGCTTCAGCTCCCG
CGGTTACGGCGCGCTCCACGGCTTCACAAAAACCCTCAACCCCGTCTTCTCCCGGTAAAA
ACCAAAGGCAAACGCCTCATCGGCCAAAAAAACTCCAAAATAGAGAGCAAATGGGAAGAG
CTTAACCAAGTTCTTCGCTGTTGCCCGTTAATTAATTAATATTATTATTTCCTGTGTAAG
CGAAGCTTGTACTACTTTGTTTTTTTTTCTTTTCCTTTTTCTGCCTTCGATTTGTGCTTG
GGTTTTGTATAGGCAGGCAGCGTGAGAGGGATAACAGGATTCCTCCCTTCGTTCGGAGGC
GTTGGTGGTAGTAGTAGTTGTCACAGGTCAGTCACATCAACTGGAAACATCAGCGGTTGG
TAAATGTGGCGCGAAGCAGAATGCCTGGTGATTTTTTTCCCCTTCCCCTACCCATTCTTG
TGTGCATGGAACTATCATCTCAACCCTGTACTACTCGTAGTAAGTGGAGTATATACACGT
TNTACTAAAAA
clustalw multiple alignements is not computed in this case