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Oryza sativa
cluster # 9460 cluster # 9460       Sequences # 6       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9460#0 length = 908 sequences # 6  

consensusID : consensus_9460#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 908
fasta sequence
                              [CGAGAAGGGAGCTCACTCTAGCTCTAGCTAAAGCTTAGCCATGGCCAGCACCGCCCGCGTCGCCGCCGCGCTGTTCCTCCTCCTGCTCGGGCTCTCCGCCACAGCCCCCCTCGCCGCCCGCGACCTCATGTCCGCCGCGCCATCCGCCAAGAAGCAGCCGGCGGGGAGGAAGCCGTCCGTGCAGCCGGGTTACCCGGGCACCAATCCCGGCGGCGGCGGTGGCGGCGGCATCCCGACCATCCCGGGGTTCGGGAGCATCCCGGGGATGGGCGGCGGCATGGGCGGGTTCAACGTGCCCGGGATGGGCGGCGGGTGGGGCGGAGGGTACGGCACGCCGAGCGGCGGGTACTCGCGCGGCGGCGTGGTGGTGCCCACGGTGGTGTGCTCCGACAAGGGCCCGTGCTAC-AGGAAGAAGGTGACGTGCCCCAAGAAGTGCTTCTCGTCCTACAGCAGCTCCGGCAAGGGCTACGGCGGCGGGGGCGGCGGCGGCGGCTGCACCATCGACTGCAAGACCAAGTGCACCGCCTACTGCTGAATCTCCCAAACGCCGAGTTCGATATATCGGCGCCGGCACCACGGATTCACTGGGTTCTGTGAAGAGTACAAGTAGGGTGTGTGATGAAGAGGATATATATATATATATATATATATATATATATATATATATATATATATATGTGCGGTTAAAAGTTTGAGGTGATGCTTTCTGGTGTTTAATTAATTAGCTATAATCAGATCAGATGCATGCAGTGTGTTCTTGTTTAAGTTCCTTTCTCTGTTTATTAGCTGGTTGTGGTACGTGTGTGTGGTATAGTACATCGCCATGAATCAATAAAGAGAACTAGCTNTGTGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AU069155             [CGAGAAGGGAGCTCACTCTAGCTCTAGCTAAAGCTTAGCCATGGCCAGCACCGCCCGCGTCGCCGCCGCGCTGTTCCTCCTCCTGCTCGGGCTCTCCGCCACAGCCCCCCTCGCCGCCCGCGACCTCATGTCCGCCGCGCCATCCGCCAAGAAGCAGCCGGCGGGGAGGAAGCCGTCCGTGCAGCCGGGTTACCCGGGCACCAATCCCGGCGGCGGCGGTGGCGGCGGCATCCCGACCATCCCGGGGTTCGGGAGCATCCCGGGGATGGGCGGCGGCATGGGCGGGTTCAACGTGCCCGGGATGGGCAGCGGGTNGGGCGGAGGGTACGGCACGCCGAGCGGCGGGTACTCGCGCGGCGGCGTGGTGGTGCCCACGGTGGTGTGCTCCGACAAGGGCCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL AU161796             [       angtgTCACTCTAGCTCTAGCTAAAGCTTAGCCATGGCCAGCACCGCCCGCGTCGCCGCCGCGCTGTTCCTCCTCCTGCTCGGGCTCTCCGCCACAGNCCCCCTCGACGCCCGCGACCTCATGTCCGCCGCGGCATNCGCCAAGAAGCAGCCGGCGGGGAGGAAGCCGTCCGTGCAGNCGGGTTACCCGGGCACCAATCCCGGCGGCGGCGGTGGCGNCGGCATCCCGACCATCCCGGGGTTCGGGAGCATCCCGGGGATGGGCGTCGGCATGGGCGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL AK108103             [                  TAGCTCTAGCTAAAGCTTAGCCATGGCCAGCACCGCCCGCGTCGCCGCCGCGCTGTTCCTCCTCCTGCTCGGGCTCTCCGCCACAGCCCCCCTCGCCGCCCGCGACCTCATGTCCGCCGCGCCATCCGCCAAGAAGCAGCCGGCGGGGAGGAAGCCGTCCGTGCAGCCGGGTTACCCGGGCACCAATCCCGGCGGCGGCGGTGGCGGCGGCATCCCGACCATCCCGGGGTTCGGGAGCATCCCGGGGATGGGCGGCGGCATGGGCGGGTTCAACGTGCCCGGGATGGGCGGCGGGTGGGGCGGAGGGTACGGCACGCCGAGCGGCGGGTACTCGCGCGGCGGCGTGGTGGTGCCCACGGTGGTGTGCTCCGACAAGGGCCCGTGCTAC AGGAAGAAGGTGACGTGCCCCAAGAAGTGCTTCTCGTCCTACAGCAGCTCCGGCAAGGGCTACGGCGGCGGGGGCGGCGGCGGCGGCTGCACCATCGACTGCAAGACCAAGTGCACCGCCTACTGCTGAATCTCCCAAACGCCGAGTTCGATATATCGGCGCCGGCACCACGGATTCACTGGGTTCTGTGAAGAGTACAAGTAGGGTGTGTGATGAAGAGGATATATATATATATATATATATATATATATATATATATATATATATATATGTGCGGTTAAAAGTTTGAGGTGATGCTTTCTGGTGTTTAATTAATTAGCTATAATCAGATCAGATGCATGCAGTGTGTTCTTGTTTAAGTTCCTTTCTCTGTTTATTAGCTGGTTGTGGTACGTGTGTGTGGTATAGTACATCGCCATGAATCAATAAAGAGAACT                                                                 ]
[+] EMBL OS0694A              [                                                                                          GCTCTCCGCCACAGCCCCCCTCGCCGCCCGCGACCTCATGTCCGCCGCGCCATCCGCCAAGAAGCAGCCGGCGGGGAGGAAGCCGTCCGTGCAGCCGGGTTACCCGGGCACCAATCCCGGCGGCGGCGGTGGCGGCGGCATCCCGACCATCCCGGGGTTCGGGAGCATCCCGGGGATGGGCGGCGGCATGGGCGGGTTCAACGTGCCCGGGATGGGCGGCGNGTGGGGCGGAGGGTACGGCACGNCGAGCGGCGGGTACTNGCGCGGCGGCGTGGTGGTGCCCACGGTGGTGTGCTNCGACAAGCGCCCGTGCTACAAGGAAGAAGGTGACGTG CCCAAGAAGTGGTTgttggt                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL C97218               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     CGAGNTCGATATATCGGCGCCGGCACCACGGATTCACTGGGTTCTGTGAAGAGTACAAGTAGGGTGTGTGATGAAGAGGATATATATATATATATATATATATATATATATATATATATATATATATATGTGCGGNTAAAAGTTTGAGGNGATGCTTTCTNGTGTTTAATTAATTAGCTATAATCAGATCAGATGCATGC                                                                                                                                                                ]
[+] EMBL C97219               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               TATATANATATATATATATATATANATATATANATATATGTGCGGTTAAAAGTTTGAGGTGATGCTTTCTGGTGTTTAATTAATTAGCTATAATCAGATCAGATGCATGCAGTGTGTTCTTGTTTAAGTTCCTTTCTCTGTTTATTAGCTGGTTGTGGTACGTGTGTGTGGTATAGTACATCGCCATGAATCAATAAAGAGAACTAGCTNTGTGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]


>consensus_9460#0 CGAGAAGGGAGCTCACTCTAGCTCTAGCTAAAGCTTAGCCATGGCCAGCACCGCCCGCGT CGCCGCCGCGCTGTTCCTCCTCCTGCTCGGGCTCTCCGCCACAGCCCCCCTCGCCGCCCG CGACCTCATGTCCGCCGCGCCATCCGCCAAGAAGCAGCCGGCGGGGAGGAAGCCGTCCGT GCAGCCGGGTTACCCGGGCACCAATCCCGGCGGCGGCGGTGGCGGCGGCATCCCGACCAT CCCGGGGTTCGGGAGCATCCCGGGGATGGGCGGCGGCATGGGCGGGTTCAACGTGCCCGG GATGGGCGGCGGGTGGGGCGGAGGGTACGGCACGCCGAGCGGCGGGTACTCGCGCGGCGG CGTGGTGGTGCCCACGGTGGTGTGCTCCGACAAGGGCCCGTGCTACAGGAAGAAGGTGAC GTGCCCCAAGAAGTGCTTCTCGTCCTACAGCAGCTCCGGCAAGGGCTACGGCGGCGGGGG CGGCGGCGGCGGCTGCACCATCGACTGCAAGACCAAGTGCACCGCCTACTGCTGAATCTC CCAAACGCCGAGTTCGATATATCGGCGCCGGCACCACGGATTCACTGGGTTCTGTGAAGA GTACAAGTAGGGTGTGTGATGAAGAGGATATATATATATATATATATATATATATATATA TATATATATATATATATGTGCGGTTAAAAGTTTGAGGTGATGCTTTCTGGTGTTTAATTA ATTAGCTATAATCAGATCAGATGCATGCAGTGTGTTCTTGTTTAAGTTCCTTTCTCTGTT TATTAGCTGGTTGTGGTACGTGTGTGTGGTATAGTACATCGCCATGAATCAATAAAGAGA ACTAGCTNTGTGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)