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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9471#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1856 fasta sequence
[TCGAGGGTTTCTCCTTCTCCCAGTGCGCCGCCGTCGCCAACATCTGGAGCCTCGCGGAGCCGCTGATTCAGCGAATTCCTCTGCAATTAGAGAGATGGGGAGCGTGGAGCTCGGAGCGGAGGAAAGGGAGGTCGCCGGCGGGGAGGGGGGGAGCAAGGGGGCGGCGCCTCCTGCTAGGGATATTAGGCGGTACAAGTGCGATTTCTGCAGTGTCGTCCGTTCCAAGAAGGGGTTGATCCGTGCCCACGTCCTCGAACACCATAAGGATGAAGTGGATGATTTGGATGATTACTTGGGACGTGGTGGCGGCGAGACGTGCAAAGAGATGGACCATGATTGCAAGGTGTGCGGTGCTAGTTTTAAGAAGCCGGCCCATTTGAGGCAACACATGCAGAGCCATTCACTTGAGACTATTTCACTATTTTGTTACATATGGATGTGTGAAGCATTGGATCCCAGAGAACTCCAAAATGCGAGAAGGCCTTGAGTGGACTAGTACCAGGATGGGGAGACCCTTCTGGGAAGCTCCTTCAAGAATGCCTCTTTCACGCTCTTCTTCAGACTATATATGACTGCGTGAAGCATTGGATCCCAAAGAACTCCAAAATGCGTGAAGGCTTTGAATGGACTAGTATCAGGATGGGGAGACTCTCCTGAGAAGCTCCATCAAGAATGCCTCGTTCACACACTTTTTCAGAGGCCCTTTTCCTGCCATGTAGATGGTTGCCCCTTCAGCTATAGCAGGAAGGACCATTTGAACCGGCATCTACTTACACATCAAGGAAAGCTATTTGCATGCCCCATGGAAGGATGCAACCGTAAGTTCACTATAAAGGGTAATATCCAAAGGCATGTTCAGGAAATGCATAAAGATGGCTCTCCTTGTGAAAGCAAGAAAGAGTTCATCTGTCCTGAGGAAAACTGTGGGAAGACTTTTAAATATGCTTCTAAGTTACAGAAGCATGAGGAATCACATGTCAAGTTGGATTATAGTGAAGTTATCTGCTGTGAACCAGGCTGCATGAAGGCATTTACCAACTTGGAATGCCTCAAGGCCCATAACAAATCTTGTCATCGACATGTTGTCTGTGATGTCTGTGGAACCAAACAGCTGAAGAAGAACTTCAAACGTCATCAGAGAATGCATGAAGGTTCCTGTGTTACTGAGAGGGTTCGATGCCACCTCAAGGACTGCAAGTTGTCATTTTCAAAGAAATCCAATCTGGACAAGCATGTGAAAGCAGTCCATGAGCAGAAGCGACCCTTTGTATGTGGATTCTCTGGGTGTGGCAAGAGTTTTTCGTACAAGCATGTAAGGGACAACCATGAGAAATCTAGTGCTCATGTGTACGTTCAGGCTAATTTCGAAGAAATTGACGGGGAACGACCACGTCAAGCAGGTGGGAGGAAGAGGAAAGCCATACCTGTGGAGAGTTTGATGCGGAAGAGGGTAGCTGCTCCTGATGATGATGCCCCAGCTTGTGATGATGGAACTGAGTATTTGAGATGGCTTCTCTCAGGCTGATTCGTCGTGAACCAGAATACAGAAATGTGAGATCTTTGGATATCAAGGGTGTTGATATGGTTTGAGATACTAGTAGCAACGTTCTTTTCCTTTGTGCATGTATAGGTAAAACATGGAAGTAATTTTGATAAGACCTCTATGTACTGTCTCAGACATCAAGTTACCAGAAGTCCAGAATGCAGAAACGCCAGATCTTTATATGCTCAAGGGTGTTTATGTGCTAGTTAGGTAGCAACGTTCTCTCTTTTTGTATGTATAGGAAAAGTGAAAGGAATTTTAGTAGACCCTAATGTCTTGTGACAGGCATGGTAATTTATCAAGGTTGGTTTGT]
[+] EMBL AK101631 [TCGAGGGTTTCTCCTTCTCCCAGTGCGCCGCCGTCGCCAACATCTGGAGCCTCGCGGAGCCGCTGATTCAGCGAATTCCTCTGCAATTAGAGAGATGGGGAGCGTGGAGCTCGGAGCGGAGGAAAGGGAGGTCGCCGGCGGGGAGGGGGGGAGCAAGGGGGCGGCGCCTCCTGCTAGGGATATTAGGCGGTACAAGTGCGATTTCTGCAGTGTCGTCCGTTCCAAGAAGGGGTTGATCCGTGCCCACGTCCTCGAACACCATAAGGATGAAGTGGATGATTTGGATGATTACTTGGGACGTGGTGGCGGCGAGACGTGCAAAGAGATGGACCATGATTGCAAGGTGTGCGGTGCTAGTTTTAAGAAGCCGGCCCATTTGAGGCAACACATGCAGAGCCATTCACTTGAGACTATTTCACTATTTTGTTACATATGGATGTGTGAAGCATTGGATCCCAGAGAACTCCAAAATGCGAGAAGGCCTTGAGTGGACTAGTACCAGGATGGGGAGACCCTTCTGGGAAGCTCCTTCAAGAATGCCTCTTTCACGCTCTTCTTCAGACTATATATGACTGCGTGAAGCATTGGATCCCAAAGAACTCCAAAATGCGTGAAGGCTTTGAATGGACTAGTATCAGGATGGGGAGACTCTCCTGAGAAGCTCCATCAAGAATGCCTCGTTCACACACTTTTTCAGAGGCCCTTTTCCTGCCATGTAGATGGTTGCCCCTTCAGCTATAGCAGGAAGGACCATTTGAACCGGCATCTACTTACACATCAAGGAAAGCTATTTGCATGCCCCATGGAAGGATGCAACCGTAAGTTCACTATAAAGGGTAATATCCAAAGGCATGTTCAGGAAATGCATAAAGATGGCTCTCCTTGTGAAAGCAAGAAAGAGTTCATCTGTCCTGAGGAAAACTGTGGGAAGACTTTTAAATATGCTTCTAAGTTACAGAAGCATGAGGAATCACATGTCAAGTTGGATTATAGTGAAGTTATCTGCTGTGAACCAGGCTGCATGAAGGCATTTACCAACTTGGAATGCCTCAAGGCCCATAACAAATCTTGTCATCGACATGTTGTCTGTGATGTCTGTGGAACCAAACAGCTGAAGAAGAACTTCAAACGTCATCAGAGAATGCATGAAGGTTCCTGTGTTACTGAGAGGGTTCGATGCCACCTCAAGGACTGCAAGTTGTCATTTTCAAAGAAATCCAATCTGGACAAGCATGTGAAAGCAGTCCATGAGCAGAAGCGACCCTTTGTATGTGGATTCTCTGGGTGTGGCAAGAGTTTTTCGTACAAGCATGTAAGGGACAACCATGAGAAATCTAGTGCTCATGTGTACGTTCAGGCTAATTTCGAAGAAATTGACGGGGAACGACCACGTCAAGCAGGTGGGAGGAAGAGGAAAGCCATACCTGTGGAGAGTTTGATGCGGAAGAGGGTAGCTGCTCCTGATGATGATGCCCCAGCTTGTGATGATGGAACTGAGTATTTGAGATGGCTTCTCTCAGGCTGATTCGTCGTGAACCAGAATACAGAAATGTGAGATCTTTGGATATCAAGGGTGTTGATATGGTTTGAGATACTAGTAGCAACGTTCTTTTCCTTTGTGCATGTATAGGTAAAACATGGAAGTAATTTTGATAAGACCTCTATGTACTGTCTCAGACATCAAGTTACCAGAAGTCCAGAATGCAGAAACGCCAGATCTTTATATGCTCAAGGGTGTTTATGTGCTAGTTAGGTAGCAACGTTCTCTCTTTTTGTATGTATAGGAAAAGTGAAAGGAATTTTAGTAGACCCTAATGTCTTGTGACAGGCATGGTAATTTATCAAGGTTGGTTTGT]
[-] EMBL CB670230 [ TAAATATGCTTCTAAGTTACAGAAGCATGAGGAATCACATGTCAAGTTGGATTATAGTGAAGTTATCTGCTGTGAACCAGGCTGCATGAAGGCATTTACCAACTTGGAATGCCTCAAGGCCCATAACAAATCTTGTCATCGACATGTTGTCTGTGATGTCTGTGGAACCAAACAGCTGAAGAAGAACTTCAAACGTCATCAGAGAATGCATGAAGGTTCCTGTGTTACTGAGAGGGTTCGATGCCACCTCAAGGACTGCAAGTTGTCATTTTCAAAGAAATCCAATCTGGACAAGCATGTGAAAGCAGTCCATGAGCAGAAGCGACCCTTTGTATGTGGATTCTCTGGGTGTGGCAAGAGTTTTTCGTACAAGCATGTAAGGGACAACCATGAGAAATCTAGTGCTCATGTGTACGTTCAGGCTAATTTCGAAGAAATTGACGGGGAACGACCACGTCAAGCAGGTGGGAGGAAGAGGAAAGCCATACCTGTGGAGAGTTTGATGCGGAAGAGGGTAGCTGCTCCTGATGATGATGCCCCAGCTTGTGATGATGGAACTGAGTATTTGAGATGGCTTCTCTCAGGCTGATTCGTCGTGAACCAGAATACAGAAATGTGAGATCTTTGGATATCAAGGGTGTTGATATGGTTTGAGATACTAGTAGCAACGTTCTTTTCCTTTGTGCATGTATAGGTAAAACATGGAAGTAATTTTGATAAGACCTCTATGTACTGTCTCAGACATCAAGTTGCCAGAAGTCCAGAATGCAGAAACGCCAGATCT ]
[-] EMBL CF322047 [ GAATGCATGAAGGTTCCTGTGTTACTGAGAGGGTTCGATGCCACCTCAAGGACTGCAAGTTGTCATTTTCAAAGAAATCCAATCTGGACAAGCATGTGAAAGCAGTCCATGAGCAGAAGCGACCCTTTGTATGTGGATTCTCTGGGTGTGGCAAGAGTTTTTCGTACAAGCATGTAAGGGACAACCATGAGAAATCTAGTGCTCATGTGTACGTTCAGGCTAATTTCGAAGAAATTGACGGGGAACGACCACGTCAAGCAGGTGGGAGGAAGAGGAAAGCCATACCTGTGGAGAGTTTGATGCGGAAGAGGGTAGCTGCTCCTGATGATGATGCCCCAGCTTGTGATGATGGAACTGAGTATTTGAGATGGCTTCTCTCAGGCTGATTCGTCGTGAACCAGAATACAGAAATGTGAGATCTTTGGATATCAAAAATGTTGATATGGTTTGAGATACTAGTAGCAACGTTCTTTTCCTTTGTGCATGTATAGGTAAAACATGGAAGTAATTTTGATAAGACCTCTATGTACTGTCTCAGACATCAAGTTACCAGAAGTCCAGAATGCAGAAACGCCAGATCTTTAaaaa ]
consensusID : consensus_9471#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1550 fasta sequence
[CTCCTTCTCCCAGTGCGCCGCCGTCGCCAACATCTGGAGCCTCGCGGAGCCGCTGATTCAGCGAATTCCTCTGCAATTAGAGAGATGGGGAGCGTGGAGCTCGGAGCGGAGGAAAGGGAGGTCGCCGGCGGGGAGGGGGGGAGCAAGGGGGCGGCGCCTCCTGCTAGGGATATTAGGCGGTACAAGTGCGATTTCTGCAGTGTCGTCCGTTCCAAGAAGGGGTTGATCCGTGCCCACGTCCTCGAACACCATAAGGATGAAGTGGATGATTTGGATGATTACTTGGGACGTGGTGGCGGCGAGACGTGCAAAGAGATGGACCATGATTGCAAGGTGTGCGGTGCTAGTTTTAAGAAGCCGGCCCATTTGAGGCAACACATGCAGAGCCATTCACTTGAGAGGCCCTTTTCCTGCCATGTAGATGGTTGCCCCTTCAGCTATAGCAGGAAGGACCATTTGAACCGGCATCTACTTACACATCAAGGAAAGCTATTTGCATGCCCCATGGAAGGATGCAACCGTAAGTTCACTATAAAGGGTAATATCCAAAGGCATGTTCAGGAAATGCATAAAGATGGCTCTCCTTGTGAAAGCAAGAAAGAGTTCATCTGTCCTGAGGAAAACTGTGGGAAGACTTTTAAATATGCTTCTAAGTTACAGAAGCATGAGGAATCACATGTCAAGTTGGATTATAGTGAAGTTATCTGCTGTGAACCAGGCTGCATGAAGGCATTTACCAACTTGGAATGCCTCAAGGCCCATAACAAATCTTGTCATCGACATGTTGTCTGTGATGTCTGTGGAACCAAACAGCTGAAGAAGAACTTCAAACGTCATCAGAGAATGCATGAAGGTTCCTGTGTTACTGAGAGGGTTCGATGCCACCTCAAGGACTGCAAGTTGTCATTTTCAAAGAAATCCAATCTGGACAAGCATGTGGAAGCAGTCCATGAGCAGAAGCGACCCTTTGTATGTGGATTCTCTGGGTGTGGCAAGAGTTTTTCGTACAAGCATGTAAGGGACAACCATGAGAAATCTAGTGCTCATGTGTACGTTCAGGCTAATTTCGAAGAAATTGACGGGGAACGACCACGTCAAGCAGGTGGGAGGAAGAGGAAAGCCATACCTGTGGAGAGTTTGATGCGGAAGAGGGTAGCTGCTCCTGATGATGATGCCCCAGCTTGTGATGATGGAACTGAGTATTTGAGATGGCTTCTCTCAGGCTGATTCGTCGTGAACCAGAATACAGAAATGTGAGATCTTTGGATATCAAGGGTGTTGATATGGTTTGAGATACTAGTAGCAACGTTCTTTTCCTTTGTGCATGTATAGGTAAAACATGGAAGTAATTTTGATAAGACCTCTATGTACTGTCTCAGACATCAAGTTACCAGAAGTCCAGAATGCAGAAACGCCAGATCTTTATATGCTCAAGGGTGTTTATGTGCTAGTTAGGTAGCAACGTTCTCTCTTTTTGTATGTATAGGAAAAGTGAAAGGAATTTTAGTAGACCCTAATGTCTTGTGACAGGCATGGTAATTTATCAAGGT]
[+] EMBL AK099528 [CTCCTTCTCCCAGTGCGCCGCCGTCGCCAACATCTGGAGCCTCGCGGAGCCGCTGATTCAGCGAATTCCTCTGCAATTAGAGAGATGGGGAGCGTGGAGCTCGGAGCGGAGGAAAGGGAGGTCGCCGGCGGGGAGGGGGGGAGCAAGGGGGCGGCGCCTCCTGCTAGGGATATTAGGCGGTACAAGTGCGATTTCTGCAGTGTCGTCCGTTCCAAGAAGGGGTTGATCCGTGCCCACGTCCTCGAACACCATAAGGATGAAGTGGATGATTTGGATGATTACTTGGGACGTGGTGGCGGCGAGACGTGCAAAGAGATGGACCATGATTGCAAGGTGTGCGGTGCTAGTTTTAAGAAGCCGGCCCATTTGAGGCAACACATGCAGAGCCATTCACTTGAGAGGCCCTTTTCCTGCCATGTAGATGGTTGCCCCTTCAGCTATAGCAGGAAGGACCATTTGAACCGGCATCTACTTACACATCAAGGAAAGCTATTTGCATGCCCCATGGAAGGATGCAACCGTAAGTTCACTATAAAGGGTAATATCCAAAGGCATGTTCAGGAAATGCATAAAGATGGCTCTCCTTGTGAAAGCAAGAAAGAGTTCATCTGTCCTGAGGAAAACTGTGGGAAGACTTTTAAATATGCTTCTAAGTTACAGAAGCATGAGGAATCACATGTCAAGTTGGATTATAGTGAAGTTATCTGCTGTGAACCAGGCTGCATGAAGGCATTTACCAACTTGGAATGCCTCAAGGCCCATAACAAATCTTGTCATCGACATGTTGTCTGTGATGTCTGTGGAACCAAACAGCTGAAGAAGAACTTCAAACGTCATCAGAGAATGCATGAAGGTTCCTGTGTTACTGAGAGGGTTCGATGCCACCTCAAGGACTGCAAGTTGTCATTTTCAAAGAAATCCAATCTGGACAAGCATGTGGAAGCAGTCCATGAGCAGAAGCGACCCTTTGTATGTGGATTCTCTGGGTGTGGCAAGAGTTTTTCGTACAAGCATGTAAGGGACAACCATGAGAAATCTAGTGCTCATGTGTACGTTCAGGCTAATTTCGAAGAAATTGACGGGGAACGACCACGTCAAGCAGGTGGGAGGAAGAGGAAAGCCATACCTGTGGAGAGTTTGATGCGGAAGAGGGTAGCTGCTCCTGATGATGATGCCCCAGCTTGTGATGATGGAACTGAGTATTTGAGATGGCTTCTCTCAGGCTGATTCGTCGTGAACCAGAATACAGAAATGTGAGATCTTTGGATATCAAGGGTGTTGATATGGTTTGAGATACTAGTAGCAACGTTCTTTTCCTTTGTGCATGTATAGGTAAAACATGGAAGTAATTTTGATAAGACCTCTATGTACTGTCTCAGACATCAAGTTACCAGAAGTCCAGAATGCAGAAACGCCAGATCTTTATATGCTCAAGGGTGTTTATGTGCTAGTTAGGTAGCAACGTTCTCTCTTTTTGTATGTATAGGAAAAGTGAAAGGAATTTTAGTAGACCCTAATGTCTTGTGACAGGCATGGTAATTTATCAAGGT]
consensusID : consensus_9471#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 837 fasta sequence
[AGCCTCGCGGAGCCGCTGATTCAGCGAATTCCTCTGCAATTAGAGAGATGGGGAGCGTGGAGCTCGGAGCGGAGGAAAGGGAGGTCGCCGGCGGGGAGGGGGGGAGCAAGGGGGCGGCGCCTCCTGCTAGGGATATTAGGCGGTACAAGTGCGATTTCTGCAGTGTCGTCCGTTCCAAGAAGGGGTTGATCCGTGCCCACGTCCTCGAACACCATAAGGATGAAGTGGATGATTTGGATGATTACTTGGGACGTGGTGGCGGCGAGACGTGCAAAGAGATGGACCATGATTGCAAGGTGTGCGGTGCTAGTTTTAAGAAGCCGGCCCATTTGAGGCAACACATGCAGAGCCATTCACTTGAGACTATTTCACTATTTTGTTACATATGGATGTGTGAAGCATTGGATCCCAGAGAACTCCAAAATGCGAGAAGGCCTTGAGTGGACTAGTACCAGGATGGGGAGACCCTTCTGGGAAGCTCCTTCAAGAATGCCTCTTTCACGCTCTTCTTCAGACTATATATGACTGCGTGAAGCATTGGATCCCAAAGAACTCCAAAATGCGTGAAGGCTTTGAATGGACTAGTATCAGGATGGGGAGACTCTCCTGAGAAGCTCCATCAAGAATGCCTCGTTCACACACTTTTTCAGGTTTGCTTGTTCATTTCAAATTGCTCATTCTAAGACTTGATTTTGTTCCAACTGTTGTTATTACTTACAGTGATATGTACGTACTGAGATATTGTTATTCTCAAGCTACTTAAGGATCCTGTCTTAGATGCAATTACTCAGTCAAGATACACATGTATATTTGTCACTGGTATTTGACTATTCATGC]
[+] EMBL CB670229 [AGCCTCGCGGAGCCGCTGATTCAGCGAATTCCTCTGCAATTAGAGAGATGGGGAGCGTGGAGCTCGGAGCGGAGGAAAGGGAGGTCGCCGGCGGGGAGGGGGGGAGCAAGGGGGCGGCGCCTCCTGCTAGGGATATTAGGCGGTACAAGTGCGATTTCTGCAGTGTCGTCCGTTCCAAGAAGGGGTTGATCCGTGCCCACGTCCTCGAACACCATAAGGATGAAGTGGATGATTTGGATGATTACTTGGGACGTGGTGGCGGCGAGACGTGCAAAGAGATGGACCATGATTGCAAGGTGTGCGGTGCTAGTTTTAAGAAGCCGGCCCATTTGAGGCAACACATGCAGAGCCATTCACTTGAGACTATTTCACTATTTTGTTACATATGGATGTGTGAAGCATTGGATCCCAGAGAACTCCAAAATGCGAGAAGGCCTTGAGTGGACTAGTACCAGGATGGGGAGACCCTTCTGGGAAGCTCCTTCAAGAATGCCTCTTTCACGCTCTTCTTCAGACTATATATGACTGCGTGAAGCATTGGATCCCAAAGAACTCCAAAATGCGTGAAGGCTTTGAATGGACTAGTATCAGGATGGGGAGACTCTCCTGAGAAGCTCCATCAAGAATGCCTCGTTCACACACTTTTTCAGGTTTGCTTGTTCATTTCAAATTGCTCATTCTAAGACTTGATTTTGTTCCAACTGTTGTTATTACTTACAGTGATATGTACGTACTGAGATATTGTTATTCTCAAGCTACTTAAGGATCCTGTCTTAGATGCAATTACTCAGTCAAGATACACATGTATATTTGTCACTGGTATTTGACTATTCATGC]
consensusID : consensus_9471#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 568 fasta sequence
[CTCCTTCTCCCGTGCGCCGCCGTCGCCAACATCTGGAGCCTCGCGGAGCCGCTGATTCAGCGAATTCCTCTGCAATTAGAGGATGAAGTGGATGATTTGGATGATTACTTGGGACGTGGTGGCGGCGAGACGTGCAAAGAGATGGACCATGATTGCAAGGTGTGCGGTGCTAGTTTTAAGAAGCCGGCCCATTTGAGGCAACACATGCAGAGCCATTCACTTGAGACTATATATGACTGCGTGAAGCATTGGATCCCAAAGGACTCCAAAATGCGTGAAGGCTTTGAATGGACTAGTATCAGGATGGGGAGACTCTCCTGAGAAGCTCCATCAAGAATGCCTCGTTCACACACTTTTTCAGAGGCCCTTTTCCTGCCATGTAGATGGTTGCCCCTTCAGCTATAGCAGGAAGGACCATTTGAACCGGCATCTACTTACACATCAAGGAAAGCTATTTGCATGCCCCATGGAAGGATGCAACCGTAAGTTCACTATAAAGGGTAATATCCAAAGGCATGTTCAGGAAATGCATAAAGATGGCTCTCCTTGTGAAAGCAAGAAAGAGTTC]
[+] EMBL CF322046 [CTCCTTCTCCCGTGCGCCGCCGTCGCCAACATCTGGAGCCTCGCGGAGCCGCTGATTCAGCGAATTCCTCTGCAATTAGAGGATGAAGTGGATGATTTGGATGATTACTTGGGACGTGGTGGCGGCGAGACGTGCAAAGAGATGGACCATGATTGCAAGGTGTGCGGTGCTAGTTTTAAGAAGCCGGCCCATTTGAGGCAACACATGCAGAGCCATTCACTTGAGACTATATATGACTGCGTGAAGCATTGGATCCCAAAGGACTCCAAAATGCGTGAAGGCTTTGAATGGACTAGTATCAGGATGGGGAGACTCTCCTGAGAAGCTCCATCAAGAATGCCTCGTTCACACACTTTTTCAGAGGCCCTTTTCCTGCCATGTAGATGGTTGCCCCTTCAGCTATAGCAGGAAGGACCATTTGAACCGGCATCTACTTACACATCAAGGAAAGCTATTTGCATGCCCCATGGAAGGATGCAACCGTAAGTTCACTATAAAGGGTAATATCCAAAGGCATGTTCAGGAAATGCATAAAGATGGCTCTCCTTGTGAAAGCAAGAAAGAGTTC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9471#0 TCGAGGGTTTCTCCTTCTCCCAGTGCGCCGCCGTCGCCAACATCTGGAGCCTCGCGGAGC 60
consensus_9471#1 ----------CTCCTTCTCCCAGTGCGCCGCCGTCGCCAACATCTGGAGCCTCGCGGAGC 50
consensus_9471#3 ----------CTCCTTCTCCC-GTGCGCCGCCGTCGCCAACATCTGGAGCCTCGCGGAGC 49
consensus_9471#2 -----------------------------------------------AGCCTCGCGGAGC 13
*************
consensus_9471#0 CGCTGATTCAGCGAATTCCTCTGCAATTAGAGAGATGGGGAGCGTGGAGCTCGGAGCGGA 120
consensus_9471#1 CGCTGATTCAGCGAATTCCTCTGCAATTAGAGAGATGGGGAGCGTGGAGCTCGGAGCGGA 110
consensus_9471#3 CGCTGATTCAGCGAATTCCTCTGCAATTAGAG-GATGAAGTGGATGA---TTTGGATGAT 105
consensus_9471#2 CGCTGATTCAGCGAATTCCTCTGCAATTAGAGAGATGGGGAGCGTGGAGCTCGGAGCGGA 73
******************************** **** * * ** * * *
consensus_9471#0 GGAAAGGGAGGTCGCCGGCGGGGAGGGGGGGAGCAAGGGGGCGGCGCCTCCTGCTAGGGA 180
consensus_9471#1 GGAAAGGGAGGTCGCCGGCGGGGAGGGGGGGAGCAAGGGGGCGGCGCCTCCTGCTAGGGA 170
consensus_9471#3 TACTTGGGACGT----GGTGGCGGCGAGACGTGCAAAGAGATGG--------ACCATGAT 153
consensus_9471#2 GGAAAGGGAGGTCGCCGGCGGGGAGGGGGGGAGCAAGGGGGCGGCGCCTCCTGCTAGGGA 133
**** ** ** ** * * * * **** * * ** * * *
consensus_9471#0 TATTAGGCGGTACAAGTGCGATTTCTGCAGTGTCGTCCGTTCCAAGAAGGGGTTGATCCG 240
consensus_9471#1 TATTAGGCGGTACAAGTGCGATTTCTGCAGTGTCGTCCGTTCCAAGAAGGGGTTGATCCG 230
consensus_9471#3 TGCAAGGTG-TGCG-GTGCTAGTTTTAAGAAGCCGGCCCATTT--GAGGCAACACATGCA 209
consensus_9471#2 TATTAGGCGGTACAAGTGCGATTTCTGCAGTGTCGTCCGTTCCAAGAAGGGGTTGATCCG 193
* *** * * * **** * ** * * ** ** * ** * ** *
consensus_9471#0 TGCCCACGTCCTCGAACACCATA-AGGATGAAGTGGATGATTTGGATGATTACTTGGGAC 299
consensus_9471#1 TGCCCACGTCCTCGAACACCATA-AGGATGAAGTGGATGATTTGGATGATTACTTGGGAC 289
consensus_9471#3 GAGCCATTCACTTGAG-ACTATATATGACTGCGTGAAGCATT----GGATCCCAAAGGAC 264
consensus_9471#2 TGCCCACGTCCTCGAACACCATA-AGGATGAAGTGGATGATTTGGATGATTACTTGGGAC 252
*** ** ** ** *** * ** *** * *** *** * ****
consensus_9471#0 GTGGTGGCGGCGAGACGTGCAAAGAGATGGACCATGATTGCAAGGTGTGCGGTGCTAGTT 359
consensus_9471#1 GTGGTGGCGGCGAGACGTGCAAAGAGATGGACCATGATTGCAAGGTGTGCGGTGCTAGTT 349
consensus_9471#3 TCCAAAATG-CGTGAAG-GCTTTGA-ATGGACTAGTATCA----GGATGGGGAGACTCTC 317
consensus_9471#2 GTGGTGGCGGCGAGACGTGCAAAGAGATGGACCATGATTGCAAGGTGTGCGGTGCTAGTT 312
* ** ** * ** ** ****** * ** * ** ** * *
consensus_9471#0 TTAAGAAGCCGGCCCATTTGAGGCAACACATGCAGAGCCATTCACTTGAGACTATTTCAC 419
consensus_9471#1 TTAAGAAGCCGGCCCATTTGAGGCAACACATGCAGAGCCATTCACTTGAGA--------- 400
consensus_9471#3 CTGAGAAGCT---CCATCAAGAATGCCTCGTTCACACACTTT---TTCAGA--------- 362
consensus_9471#2 TTAAGAAGCCGGCCCATTTGAGGCAACACATGCAGAGCCATTCACTTGAGACTATTT--- 369
* ****** **** * * * ** * * ** ** ***
consensus_9471#0 TATTTTGTTACATATGGATGTGTGAAGCATTGGATCCCAGAGAACTCCAAAATGCGAGAA 479
consensus_9471#1 ------------------------------------------------------------
consensus_9471#3 ------------------------------------------------------------
consensus_9471#2 ------------------------------------------------------------
consensus_9471#0 GGCCTTGAGTGGACTAGTACCAGGATGGGGAGACCCTTCTGGGAAGCTCCTTCAAGAATG 539
consensus_9471#1 ------------------------------------------------------------
consensus_9471#3 ------------------------------------------------------------
consensus_9471#2 ------------------------------------------------------------
consensus_9471#0 CCTCTTTCACGCTCTTCTTCAGACTATATATGACTGCGTGAAGCATTGGATCCCAAAGAA 599
consensus_9471#1 ------------------------------------------------------------
consensus_9471#3 ------------------------------------------------------------
consensus_9471#2 ------------------------------------------------------------
consensus_9471#0 CTCCAAAATGCGTGAAGGCTTTGAATGGACTAGTATCAGGATGGGGAGACTCTCCTGAGA 659
consensus_9471#1 ------------------------------------------------------------
consensus_9471#3 ------------------------------------------------------------
consensus_9471#2 ------------------------------------------------------------
consensus_9471#0 AGCTCCATCAAGAATGCCTCGTTCACACACTTTTTCAGAGGCCCTTTTCCTGCCATGTAG 719
consensus_9471#1 ---------------------------------------GGCCCTTTTCCTGCCATGTAG 421
consensus_9471#3 ---------------------------------------GGCCCTTTTCCTGCCATGTAG 383
consensus_9471#2 ---------------------------------------CACTATTTTGTTAC-ATATGG 389
* **** * * ** * *
consensus_9471#0 ATGGTTGCCCCTTCAGCTATAGCAGGAAGGACCA---TTTGAACCGGCAT--------CT 768
consensus_9471#1 ATGGTTGCCCCTTCAGCTATAGCAGGAAGGACCA---TTTGAACCGGCAT--------CT 470
consensus_9471#3 ATGGTTGCCCCTTCAGCTATAGCAGGAAGGACCA---TTTGAACCGGCAT--------CT 432
consensus_9471#2 ATGTGTGAAGCATTGG--ATCCCAGAGAACTCCAAAATGCGAGAAGGCCTTGAGTGGACT 447
*** ** * * * ** *** * *** * ** *** * **
consensus_9471#0 ACTTACACATCAAGGAAAGCTATTTGCATGCCCCATGGAAGGATGCAACCGTAAGTTCAC 828
consensus_9471#1 ACTTACACATCAAGGAAAGCTATTTGCATGCCCCATGGAAGGATGCAACCGTAAGTTCAC 530
consensus_9471#3 ACTTACACATCAAGGAAAGCTATTTGCATGCCCCATGGAAGGATGCAACCGTAAGTTCAC 492
consensus_9471#2 AGTACCAGGATGGGGAGACCCTTCTGGGAAGCTCCTTCAAGAATGCCTCTTTCACGCTCT 507
* * ** *** * * * ** * * * *** **** * * *
consensus_9471#0 TATAAAGGGTAATATCCAAAGGCATGTT-CAGGAAATGCATAAAGATGGCTCTCCTTGTG 887
consensus_9471#1 TATAAAGGGTAATATCCAAAGGCATGTT-CAGGAAATGCATAAAGATGGCTCTCCTTGTG 589
consensus_9471#3 TATAAAGGGTAATATCCAAAGGCATGTT-CAGGAAATGCATAAAGATGGCTCTCCTTGTG 551
consensus_9471#2 TCTTCAGACTA-TATATGACTGCGTGAAGCATTGGATCCCAAAGAACTCCAAAATGCGTG 566
* * ** ** *** * ** ** ** ** * ** * * ***
consensus_9471#0 AAAGCAA-GAAAGAGTT--CATCTGTCCTGAGGAAAACTGTGGGAAGACTTTTAAATATG 944
consensus_9471#1 AAAGCAA-GAAAGAGTT--CATCTGTCCTGAGGAAAACTGTGGGAAGACTTTTAAATATG 646
consensus_9471#3 AAAGCAA-GAAAGAGTT--C---------------------------------------- 568
consensus_9471#2 AAGGCTTTGAATGGACTAGTATCAGGATGGGGAGACTCTCCTGAGAAGCTCCATCAAGAA 626
** ** *** * *
consensus_9471#0 CTTCTAAGTTACAGAAGCATGAGGAATCACATGTCAAGTTGGATTATAGTGAAGTTATCT 1004
consensus_9471#1 CTTCTAAGTTACAGAAGCATGAGGAATCACATGTCAAGTTGGATTATAGTGAAGTTATCT 706
consensus_9471#3 ------------------------------------------------------------
consensus_9471#2 TGCCTCGTTCACACACTTTTTCAGGTTTGCTTGTTCATTTCAA--ATTGCTCATTCTAAG 684
consensus_9471#0 GCTGTGAACCAGGCTGCATGAAGGCATTTACCAACTTGGAATGCCTCAAGGCCCATAACA 1064
consensus_9471#1 GCTGTGAACCAGGCTGCATGAAGGCATTTACCAACTTGGAATGCCTCAAGGCCCATAACA 766
consensus_9471#3 ------------------------------------------------------------
consensus_9471#2 ACTTGATTTTGTTCCAACTGTTGTTATTACTTACAGTGATATGTACGTACTGAGATATTG 744
consensus_9471#0 AATCTTGTCATCGACATGTTGTCTGTGATGTCTGTGGAACCAAACAGCTGAAGAAGAACT 1124
consensus_9471#1 AATCTTGTCATCGACATGTTGTCTGTGATGTCTGTGGAACCAAACAGCTGAAGAAGAACT 826
consensus_9471#3 ------------------------------------------------------------
consensus_9471#2 TTATTCTCAAGCTACTTAAGGATCCTGTCTTAGATGCAATTACTCAG-TCAAGATACACA 803
consensus_9471#0 TCAAACGTCATCAGAGAATGCATGAAGGTTCCTGTGTTACTGAGAGGGTTCGATGCCACC 1184
consensus_9471#1 TCAAACGTCATCAGAGAATGCATGAAGGTTCCTGTGTTACTGAGAGGGTTCGATGCCACC 886
consensus_9471#3 ------------------------------------------------------------
consensus_9471#2 TGTATATTTGTCACTGG-TATTTGACTATTCATGC------------------------- 837
consensus_9471#0 TCAAGGACTGCAAGTTGTCATTTTCAAAGAAATCCAATCTGGACAAGCATGTGAAAGCAG 1244
consensus_9471#1 TCAAGGACTGCAAGTTGTCATTTTCAAAGAAATCCAATCTGGACAAGCATGTGGAAGCAG 946
consensus_9471#3 ------------------------------------------------------------
consensus_9471#2 ------------------------------------------------------------
consensus_9471#0 TCCATGAGCAGAAGCGACCCTTTGTATGTGGATTCTCTGGGTGTGGCAAGAGTTTTTCGT 1304
consensus_9471#1 TCCATGAGCAGAAGCGACCCTTTGTATGTGGATTCTCTGGGTGTGGCAAGAGTTTTTCGT 1006
consensus_9471#3 ------------------------------------------------------------
consensus_9471#2 ------------------------------------------------------------
consensus_9471#0 ACAAGCATGTAAGGGACAACCATGAGAAATCTAGTGCTCATGTGTACGTTCAGGCTAATT 1364
consensus_9471#1 ACAAGCATGTAAGGGACAACCATGAGAAATCTAGTGCTCATGTGTACGTTCAGGCTAATT 1066
consensus_9471#3 ------------------------------------------------------------
consensus_9471#2 ------------------------------------------------------------
consensus_9471#0 TCGAAGAAATTGACGGGGAACGACCACGTCAAGCAGGTGGGAGGAAGAGGAAAGCCATAC 1424
consensus_9471#1 TCGAAGAAATTGACGGGGAACGACCACGTCAAGCAGGTGGGAGGAAGAGGAAAGCCATAC 1126
consensus_9471#3 ------------------------------------------------------------
consensus_9471#2 ------------------------------------------------------------
consensus_9471#0 CTGTGGAGAGTTTGATGCGGAAGAGGGTAGCTGCTCCTGATGATGATGCCCCAGCTTGTG 1484
consensus_9471#1 CTGTGGAGAGTTTGATGCGGAAGAGGGTAGCTGCTCCTGATGATGATGCCCCAGCTTGTG 1186
consensus_9471#3 ------------------------------------------------------------
consensus_9471#2 ------------------------------------------------------------
consensus_9471#0 ATGATGGAACTGAGTATTTGAGATGGCTTCTCTCAGGCTGATTCGTCGTGAACCAGAATA 1544
consensus_9471#1 ATGATGGAACTGAGTATTTGAGATGGCTTCTCTCAGGCTGATTCGTCGTGAACCAGAATA 1246
consensus_9471#3 ------------------------------------------------------------
consensus_9471#2 ------------------------------------------------------------
consensus_9471#0 CAGAAATGTGAGATCTTTGGATATCAAGGGTGTTGATATGGTTTGAGATACTAGTAGCAA 1604
consensus_9471#1 CAGAAATGTGAGATCTTTGGATATCAAGGGTGTTGATATGGTTTGAGATACTAGTAGCAA 1306
consensus_9471#3 ------------------------------------------------------------
consensus_9471#2 ------------------------------------------------------------
consensus_9471#0 CGTTCTTTTCCTTTGTGCATGTATAGGTAAAACATGGAAGTAATTTTGATAAGACCTCTA 1664
consensus_9471#1 CGTTCTTTTCCTTTGTGCATGTATAGGTAAAACATGGAAGTAATTTTGATAAGACCTCTA 1366
consensus_9471#3 ------------------------------------------------------------
consensus_9471#2 ------------------------------------------------------------
consensus_9471#0 TGTACTGTCTCAGACATCAAGTTACCAGAAGTCCAGAATGCAGAAACGCCAGATCTTTAT 1724
consensus_9471#1 TGTACTGTCTCAGACATCAAGTTACCAGAAGTCCAGAATGCAGAAACGCCAGATCTTTAT 1426
consensus_9471#3 ------------------------------------------------------------
consensus_9471#2 ------------------------------------------------------------
consensus_9471#0 ATGCTCAAGGGTGTTTATGTGCTAGTTAGGTAGCAACGTTCTCTCTTTTTGTATGTATAG 1784
consensus_9471#1 ATGCTCAAGGGTGTTTATGTGCTAGTTAGGTAGCAACGTTCTCTCTTTTTGTATGTATAG 1486
consensus_9471#3 ------------------------------------------------------------
consensus_9471#2 ------------------------------------------------------------
consensus_9471#0 GAAAAGTGAAAGGAATTTTAGTAGACCCTAATGTCTTGTGACAGGCATGGTAATTTATCA 1844
consensus_9471#1 GAAAAGTGAAAGGAATTTTAGTAGACCCTAATGTCTTGTGACAGGCATGGTAATTTATCA 1546
consensus_9471#3 ------------------------------------------------------------
consensus_9471#2 ------------------------------------------------------------
consensus_9471#0 AGGTTGGTTTGT 1856
consensus_9471#1 AGGT-------- 1550
consensus_9471#3 ------------
consensus_9471#2 ------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||