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Oryza sativa
cluster # 9475 cluster # 9475       Sequences # 6       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9475#0 length = 2206 sequences # 4  
consensus_9475#1 length = 1623 sequences # 2  

consensusID : consensus_9475#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 2206
fasta sequence
                              [CACGTGCCATCTCATCTACTCTATCTCTCACCTCCGCCCGCCTCGTCGTCTCTCTGACAACCGTACAGCCGCCCGCCTTCCGCTCCGCGCCGCCGCCTCCGCCGCTGCCGCCGCGCGGGCGTACGTGTCTATGGCGACGATGTCTCGCCGCGCACTCGGCTCTGCGTTCGCGGGATTCACGCGGACACCAGCTATGACTCCGACGGCCACCTTGCCTTCCTCGTGCGCGTCCCCGGCGCGTCTCCTGCGGTGGCGCCGGAGCGCGGGTGTAGGCGCCCGGCGGTTCGCGTCCGGCCGCAACGCGCGGATTAGCATGAGCCTCCGCGCCGGCATCGTCGGCCTGCCCAACGTCGGCAAGTCCACACTCTTCAATGCCATTGTAAGGAACCTTCCCTCTGCTTCTTCCGAAGAATTCCGTGCTGTTATGAACTCGTTTTTAGCTGGAAGCAACTCGAGGAGAAAGAAGGCGATCTTGATTATTTGTGCTTTTGAGGAGTTCTTCTCGATTCATGGATTGGTTTTGGTCGAGGATGAAGTGGGTATGCGGCGTCAATGGAACTGCGCATCAACTGTTTGATTCTTTGCCACACAGAGATGCAGCTCTCCAACGTTTGACTAGTTATGAACTTATGATGCTTAACTTAGATAGGACTCGTCACAGATTTTTTTGCACTGAATTTTCATTTCCCTAGCTGCAGGAGTGCTTTTGCAGTCGTGATGATTGTTTGATGGGAAGTATAGTGAATCTTTAACGCATGAAAATGCAACTGCCGTATTGCACGGGACATGCCATTCCTCGCAATAATGTGCATGCTATTGTTGATTACGTTGTAACATGAATTCTTTTGTCAACGTTGTCAGGTTGAAAATGGGAAGGCACAAGCTGCAAACTTTCCCTTCTGCACCATAAACCCCAACGTTGGTGTTGTGGCTATCCCAGATGCTCGCTTGCATGTGCTCTCAAAATTAAGCAAGTCTAAGGAGACAATCCCAACATCCATAGAGCTTGTGGATATTGCAGGTCTCGTCAAAGGAGCAAGCAAAGGAGAGGGACTAGGAAACCAATTTCTTTCGAACATCCGTGAGGTTGATTCCATCCTTCAGGCCTTTTCAGGTTGTGCGATGTTTTGAAGATGATGATATTGTTCATGTGAGTGGGAAAGTTGATCCCAAATCAGATATTGATGTAATTAATCTGGAGCTTATATTTTCTGATCTTGACCAGATAGAGAAAAGACTGGATAAGCTTAAAAAGAGCAAAACTAAAGACCAGCAAGTAAAGGTCAAGGAACAAGCAGAGAGGACTGGATTGGAAAAAATTCAGACTGTACTTATGGATGGAAAACCTGCTAGATCTGTTGATTTGGCTGACCATGAGAAAGAAGCTATCCAACATCTTTGTCTACTAACTATGAAACCTGTCATTTATGTTGCCAACGTAACTGAATCTGATCTTGCTGAACCTGGTAACAACCCTCATGTCAAAGAGGTAGCCAAACTAGCAACAGACTTGGAATCTGGCATGGTTACAATATCAGCTCAGGTTGAGGCTGAACTTGCTGAACTGCCATTAGAAGAGAGAGTCGAATATCTAAAATCCCTTGGTGTTACTGAAAGTGGACTAGGAAATTTGGTAAAGGCAACATATGACCTTCTGGGATTGAGGACTTATTTCACAACTGGAGATAAGGAAACAAAAGCTTGGACTATTCTTGCAGGCATGACTGCACCTCAAGCAGCAGGAGTTATTCACAGTGACTTTCAGAAAGGCTTCATTAGAGCTGAAACTGTATCATATGATGATTTTGTCGCGGCGGGTTCTCTTGGAGTTGCAAGGGAGAAGGGATTGTTGAGGTTGGAAGGGAAGGATTACATCGTGCAGGAAGGCGATGTCATGCTTTTCCGGTTCAACGTTTGACAACAACTCAACAATAATAGCAGCAGCGAGAAGTTTCAATATATACTCGAATTTTGCACAAGAGAGAAACAGATCATGGGATTTTTTTTTGTCTGAGACATTAACTGTACTTGCGTCATTGGAACTTTGCGGCATCATTGCTTTAGCCCATGGCTTTGTAAATCATTCAAGATAAGCTCTCTACGAAACATTAGAGTATAATTCGACATACCTACTTATAAACTGTCATTTGAACATTGTAATCTTCAATCGAAAATTTGATGCGACATCTTTTTTAAGTGTTNAAAA]

[+] EMBL AK065910             [CACGTGCCATCTCATCTACTCTATCTCTCACCTCCGCCCGCCTCGTCGTCTCTCTGACAACCGTACAGCCGCCCGCCTTCCGCTCCGCGCCGCCGCCTCCGCCGCTGCCGCCGCGCGGGCGTACGTGTCTATGGCGACGATGTCTCGCCGCGCACTCGGCTCTGCGTTCGCGGGATTCACGCGGACACCAGCTATGACTCCGACGGCCACCTTGCCTTCCTCGTGCGCGTCCCCGGCGCGTCTCCTGCGGTGGCGCCGGAGCGCGGGTGTAGGCGCCCGGCGGTTCGCGTCCGGCCGCAACGCGCGGATTAGCATGAGCCTCCGCGCCGGCATCGTCGGCCTGCCCAACGTCGGCAAGTCCACACTCTTCAATGCCATTGTAAGGAACCTTCCCTCTGCTTCTTCCGAAGAATTCCGTGCTGTTATGAACTCGTTTTTAGCTGGAAGCAACTCGAGGAGAAAGAAGGCGATCTTGATTATTTGTGCTTTTGAGGAGTTCTTCTCGATTCATGGATTGGTTTTGGTCGAGGATGAAGTGGGTATGCGGCGTCAATGGAACTGCGCATCAACTGTTTGATTCTTTGCCACACAGAGATGCAGCTCTCCAACGTTTGACTAGTTATGAACTTATGATGCTTAACTTAGATAGGACTCGTCACAGATTTTTTTGCACTGAATTTTCATTTCCCTAGCTGCAGGAGTGCTTTTGCAGTCGTGATGATTGTTTGATGGGAAGTATAGTGAATCTTTAACGCATGAAAATGCAACTGCCGTATTGCACGGGACATGCCATTCCTCGCAATAATGTGCATGCTATTGTTGATTACGTTGTAACATGAATTCTTTTGTCAACGTTGTCAGGTTGAAAATGGGAAGGCACAAGCTGCAAACTTTCCCTTCTGCACCATAAACCCCAACGTTGGTGTTGTGGCTATCCCAGATGCTCGCTTGCATGTGCTCTCAAAATTAAGCAAGTCTAAGGAGACAATCCCAACATCCATAGAGCTTGTGGATATTGCAGGTCTCGTCAAAGGAGCAAGCAAAGGAGAGGGACTAGGAAACCAATTTCTTTCGAACATCCGTGAGGTTGATTCCATCCTTCAGGCCTTTTCAGGTTGTGCGATGTTTTGAAGATGATGATATTGTTCATGTGAGTGGGAAAGTTGATCCCAAATCAGATATTGATGTAATTAATCTGGAGCTTATATTTTCTGATCTTGACCAGATAGAGAAAAGACTGGATAAGCTTAAAAAGAGCAAAACTAAAGACCAGCAAGTAAAGGTCAAGGAACAAGCAGAGAGGACTGGATTGGAAAAAATTCAGACTGTACTTATGGATGGAAAACCTGCTAGATCTGTTGATTTGGCTGACCATGAGAAAGAAGCTATCCAACATCTTTGTCTACTAACTATGAAACCTGTCATTTATGTTGCCAACGTAACTGAATCTGATCTTGCTGAACCTGGTAACAACCCTCATGTCAAAGAGGTAGCCAAACTAGCAACAGACTTGGAATCTGGCATGGTTACAATATCAGCTCAGGTTGAGGCTGAACTTGCTGAACTGCCATTAGAAGAGAGAGTCGAATATCTAAAATCCCTTGGTGTTACTGAAAGTGGACTAGGAAATTTGGTAAAGGCAACATATGACCTTCTGGGATTGAGGACTTATTTCACAACTGGAGATAAGGAAACAAAAGCTTGGACTATTCTTGCAGGCATGACTGCACCTCAAGCAGCAGGAGTTATTCACAGTGACTTTCAGAAAGGCTTCATTAGAGCTGAAACTGTATCATATGATGATTTTGTCGCGGCGGGTTCTCTTGGAGTTGCAAGGGAGAAGGGATTGTTGAGGTTGGAAGGGAAGGATTACATCGTGCAGGAAGGCGATGTCATGCTTTTCCGGTTCAACGTTTGACAACAACTCAACAATAATAGCAGCAGCGAGAAGTTTCAATATATACTCGAATTTTGCACAAGAGAGAAACAGATCATGGGATTTTTTTTTGTCTGAGACATTAACTGTACTTGCGTCATTGGAACTTTGCGGCATCATTGCTTTAGCCCATGGCTTTGTAAATCATTCAAGATAAGCTCTCTACGAAACATTAGAGTATAATTCGACATACCTACTTATAAACTGTCATTTGAACATTGTAATCTTCAATCGAAAATTTGATGCGACATCTTTTTTAA          ]
[-] EMBL CB620886             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        GCCAACGTAACTGAATCTGATCTTGCTGAACCTGGTAACAACCCTCATGTCAAAGAGGTAGCCAAACTAGCAACAGACTTGGAATCTGGCATGGTTACAATATCAGCTCAGGTTGAGGCTGAACTTGCTGAACTGCCATTAGAAGAGAGAGTCGAATATCTAAAATCCCTTGGTGTTACTGAAAGTGGACTAGGAAATTTGGTAAAGGCAACATATGACCTTCTGGGATTGAGGACTTATTTCACAACTGGAGATAAGGAAACAAAAGCTTGGACTATTCTTGCAGGCATGACTGCACCTCAAGCAGCAGGAGTTATTCACAGTGACTTTCAGAAAGGCTTCATTAGAGCTGAAACTGTATCATATGATGATTTTGTCGCGGCGGGTTCTCTTGGAGTTGCAAGGGAGAAGGGATTGTTGAGGTTGGAAGGGAAGGATTACATCGTGCAGGAAGGCGATGTCATGCTTTTCCGGTTCAACGTTTGACAACAACTCAACAATAATAGCAGCAGCGAGAAGTTTCAATATATACTCGAATTTTGCACAAGAGAGAAACAGATCATGGGATTTTTTTTTGTCTGAGACATTAACTGTACTTGCGTCATTGGAACTTTGCGGCATCATTGCTTTAGCCCATGGCTTTGTAAATCATTCAAGATAAGCTCTCTACGAAACATTAGAGTATAATTCGACATACCTACTTATAAACTGTCATTTGAACATTGTAATCTTCAATCGAAAATTTGAGGCGACATCTTTTTTAAGTGTT     ]
[+] EMBL BM419388             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           AAACAAAAGCTTGGACTATTCTTGCAGGCATGACTGCACCTCAAGCAGCAGGAGTTATTCACAGTGACTTTCAGAAAGGCTTCATTAGAGCTGAAACTGTATCATATGATGATTTTGTCGCGGCGGGTTCTCTTGGAGTTGCAAGGGAGAAGGGATTGTTGAGGTTGGAAGGGAAGGATTACATCGTGCAGGAAGGCGATGTCATGCTTTTCCGGTTCAACGTTTGACAACAACTCAACAATAATAGCAGCAGCGAGAAGTTTCAATATATACTCGAATTTTGCACAAGAGAGAAACAGATCATGGGATTTTTTTTTGTCTGAGACATTAACTGTACTTGCGTCATTGGAACTTTGCGGCATCATTGCTTTAGCCCATGGCTTTGTAAATCATTCAAGATAAGCTCTCTACGAAACATTAGAGTATAATTCGACATACCTACTTATAAACTGTCATTTGAACATTGTAATCTTCAATCGAAAATT                              ]
[+] EMBL AU070308             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              CCGGTTCAACGTTTGACAACAACTCAACAATAATAGCAGCNGCGAGAAGTTTCAATATATACCCGAATTTTGCACAAGAGAGAAACAGATCATGGGATTTTTTTTTGTCTGAGACATTAACTGTACTTGCGTCATTGGAACTTTGCGGCATCATTGCTTTAGCCCATGGCTTTGTAAATCATTCAAGATAAGCTCTCTACGAAACATTAGAGTATAATTCGACATACCTACTTATAAACTGTCATTTGAACATTGTAATCTTCAATCGAAAATTTGATGCGACATCTTTTTTAAGTGTTNAAAA]


>consensus_9475#0 CACGTGCCATCTCATCTACTCTATCTCTCACCTCCGCCCGCCTCGTCGTCTCTCTGACAA CCGTACAGCCGCCCGCCTTCCGCTCCGCGCCGCCGCCTCCGCCGCTGCCGCCGCGCGGGC GTACGTGTCTATGGCGACGATGTCTCGCCGCGCACTCGGCTCTGCGTTCGCGGGATTCAC GCGGACACCAGCTATGACTCCGACGGCCACCTTGCCTTCCTCGTGCGCGTCCCCGGCGCG TCTCCTGCGGTGGCGCCGGAGCGCGGGTGTAGGCGCCCGGCGGTTCGCGTCCGGCCGCAA CGCGCGGATTAGCATGAGCCTCCGCGCCGGCATCGTCGGCCTGCCCAACGTCGGCAAGTC CACACTCTTCAATGCCATTGTAAGGAACCTTCCCTCTGCTTCTTCCGAAGAATTCCGTGC TGTTATGAACTCGTTTTTAGCTGGAAGCAACTCGAGGAGAAAGAAGGCGATCTTGATTAT TTGTGCTTTTGAGGAGTTCTTCTCGATTCATGGATTGGTTTTGGTCGAGGATGAAGTGGG TATGCGGCGTCAATGGAACTGCGCATCAACTGTTTGATTCTTTGCCACACAGAGATGCAG CTCTCCAACGTTTGACTAGTTATGAACTTATGATGCTTAACTTAGATAGGACTCGTCACA GATTTTTTTGCACTGAATTTTCATTTCCCTAGCTGCAGGAGTGCTTTTGCAGTCGTGATG ATTGTTTGATGGGAAGTATAGTGAATCTTTAACGCATGAAAATGCAACTGCCGTATTGCA CGGGACATGCCATTCCTCGCAATAATGTGCATGCTATTGTTGATTACGTTGTAACATGAA TTCTTTTGTCAACGTTGTCAGGTTGAAAATGGGAAGGCACAAGCTGCAAACTTTCCCTTC TGCACCATAAACCCCAACGTTGGTGTTGTGGCTATCCCAGATGCTCGCTTGCATGTGCTC TCAAAATTAAGCAAGTCTAAGGAGACAATCCCAACATCCATAGAGCTTGTGGATATTGCA GGTCTCGTCAAAGGAGCAAGCAAAGGAGAGGGACTAGGAAACCAATTTCTTTCGAACATC CGTGAGGTTGATTCCATCCTTCAGGCCTTTTCAGGTTGTGCGATGTTTTGAAGATGATGA TATTGTTCATGTGAGTGGGAAAGTTGATCCCAAATCAGATATTGATGTAATTAATCTGGA GCTTATATTTTCTGATCTTGACCAGATAGAGAAAAGACTGGATAAGCTTAAAAAGAGCAA AACTAAAGACCAGCAAGTAAAGGTCAAGGAACAAGCAGAGAGGACTGGATTGGAAAAAAT TCAGACTGTACTTATGGATGGAAAACCTGCTAGATCTGTTGATTTGGCTGACCATGAGAA AGAAGCTATCCAACATCTTTGTCTACTAACTATGAAACCTGTCATTTATGTTGCCAACGT AACTGAATCTGATCTTGCTGAACCTGGTAACAACCCTCATGTCAAAGAGGTAGCCAAACT AGCAACAGACTTGGAATCTGGCATGGTTACAATATCAGCTCAGGTTGAGGCTGAACTTGC TGAACTGCCATTAGAAGAGAGAGTCGAATATCTAAAATCCCTTGGTGTTACTGAAAGTGG ACTAGGAAATTTGGTAAAGGCAACATATGACCTTCTGGGATTGAGGACTTATTTCACAAC TGGAGATAAGGAAACAAAAGCTTGGACTATTCTTGCAGGCATGACTGCACCTCAAGCAGC AGGAGTTATTCACAGTGACTTTCAGAAAGGCTTCATTAGAGCTGAAACTGTATCATATGA TGATTTTGTCGCGGCGGGTTCTCTTGGAGTTGCAAGGGAGAAGGGATTGTTGAGGTTGGA AGGGAAGGATTACATCGTGCAGGAAGGCGATGTCATGCTTTTCCGGTTCAACGTTTGACA ACAACTCAACAATAATAGCAGCAGCGAGAAGTTTCAATATATACTCGAATTTTGCACAAG AGAGAAACAGATCATGGGATTTTTTTTTGTCTGAGACATTAACTGTACTTGCGTCATTGG AACTTTGCGGCATCATTGCTTTAGCCCATGGCTTTGTAAATCATTCAAGATAAGCTCTCT ACGAAACATTAGAGTATAATTCGACATACCTACTTATAAACTGTCATTTGAACATTGTAA TCTTCAATCGAAAATTTGATGCGACATCTTTTTTAAGTGTTNAAAA



consensusID : consensus_9475#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1623
fasta sequence
                              [GCTCCGCGCCGCCGCCTCCGCCGCTGCCGCCGCGCGGGCGTACGTGTCTATGGCGACGATGTCTCGCCGCGCACTCGGCTCTGCGTTCGCGGGATTCACGCGGACACCAGCTATGACTCCGACGGCCACCTTGCCTTCCTCGTGCGCGTCCCCGGCGCGTCTCCTGCGGTGGCGCCGGAGCGCGGGTGTAGGCGCCCGGCGGTTCGCGTCCGGCCGCAACGCGCGGATTAGCATGAGCCTCCGCGCCGGCATCGTCGGCCTGCCCAACGTCGGCAAGTCCACACTCTTCAATGCCATTGTTGAAAATGGGAAGGCACAAGCTGCAAACTTTCCCTTCTGCACCATAAACCCCAACGTTGGTGTTGTGGCTATCCCAGATGCTCGCTTGCATGTGCTCTCAAAATTAAGCAAGTCTAAGGAGACAATCCCAACATCCATAGAGCTTGTGGATATTGCAGGTCTCGTCAAAGGAGCAAGCAAAGGAGAGGGACTAGGAAACCAATTTCTTTCGAACATCCGTGAGGTTGATTCCATCCTTCAGGTTGTGCGATGTTTTGAAGATGATGATATTGTTCATGTGAGTGGGAAAGTTGATCCCAAATCAGATATTGATGTAATTAATCTGGAGCTTATATTTTCTGATCTTGACCAGATAGAGAAAAGACTGGATAAGCTTAAAAAGAGCAAAACTAAAGACCAGCAAGTAAAGGTCAAGGAACAAGCAGAGAGGACTGGATTGGAAAAAATTCAGACTGTACTTATGGATGGAAAACCTGCTAGATCTGTTGATTTGGCTGACCATGAGAAAGAAGCTATCCAACATCTTTGTCTACTAACTATGAAACCTGTCATTTATGGTGCCAACGTAACTGAATCTGATCTTGCTGAACCTGGTAACAACCCTCATGTCAAAGAGGTAGCCAAACTAGCAACAGACTTGGAATCTGGCATGGTTACAATATCAGCTCAGGTTGAGGCTGAACTTGCTGAACTGCCATTAGAAGAGAGAGTCGAATATCTAAAATCCCTTGGTGTTACTGAAAGTGGACTAGGAAATTTGGTAAAGGCAACATATGACCTTCTGGGATTGAGGACTTATTTCACAACTGGAGATAAGGAAACAAAAGCTTGGACTATTCTTGCAGGCATGACTGCACCTCAAGCAGCAGGAGTTATTCACAGTGACTTTCAGAAAGGCTTCATTAGAGCTGAAACTGTATCATATGATGATTTTGTCGCGGCGGGTTCTCTTGGAGTTGCAAGGGAGAAGGGATTGTTGAGGTTGGAAGGGAAGGATTACATCGTGCAGGAAGGCGATGTCATGCTTTTCCGGTTCAACGTTTGACAACAACTCAACAATAATAGCAGCAGCGAGAAGTTTCAATATATACTCGAATTTTGCACAAGAGAGAAACAGATCATGGGATTTTTTTTTGTCTGAGACATTAACTGTACTTGCGTCATTGGAACTTTGCGGCATCATTGCTTTAGCCCATGGCTTTGTAAATCATTCAAGATAAGCTCTCTACGAAACATTAGAGTATAATTCGACATACCTACTTATAAACTGTCATTTGAAGCATTGTAATCTTCAATCGAAAATTTGATGCGAAAAAAAAAAGA]

[+] EMBL CB620885             [GCTCCGCGCCGCCGCCTCCGCCGCTGCCGCCGCGCGGGCGTACGTGTCTATGGCGACGATGTCTCGCCGCGCACTCGGCTCTGCGTTCGCGGGATTCACGCGGACACCAGCTATGACTCCGACGGCCACCTTGCCTTCCTCGTGCGCGTCCCCGGCGCGTCTCCTGCGGTGGCGCCGGAGCGCGGGTGTAGGCGCCCGGCGGTTCGCGTCCGGCCGCAACGCGCGGATTAGCATGAGCCTCCGCGCCGGCATCGTCGGCCTGCCCAACGTCGGCAAGTCCACACTCTTCAATGCCATTGTTGAAAATGGGAAGGCACAAGCTGCAAACTTTCCCTTCTGCACCATAAACCCCAACGTTGGTGTTGTGGCTATCCCAGATGCTCGCTTGCATGTGCTCTCAAAATTAAGCAAGTCTAAGGAGACAATCCCAACATCCATAGAGCTTGTGGATATTGCAGGTCTCGTCAAAGGAGCAAGCAAAGGAGAGGGACTAGGAAACCAATTTCTTTCGAACATCCGTGAGGTTGATTCCATCCTTCAGGTTGTGCGATGTTTTGAAGATGATGATATTGTTCATGTGAGTGGGAAAGTTGATCCCAAATCAGATATTGATGTAATTAATCTGGAGCTTATATTTTCTGATCTTGACCAGATAGAGAAAAGACTGGATAAGCTTAAAAAGAGCAAAACTAAAGACCAGCAAGTAAAGGTCAAGGAACAAGCAGAGAGGACTGGATTGGAAAAAATTCAGACTGTACTTATGGATGGAAAACCTGCTAGATCTGTTGATTTGGCTGACCATGAGAAAGAAGCTATCCAACATCTTTGTCTACTAACTATGAAACCTGTCATTTATGGTGCCAACGTAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL CB635607             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             TATCCAACATCTTTGTCTACTAACTATGAAACCTGTCATTTATGTTGCCAACGTAACTGAATCTGATCTTGCTGAACCTGGTAACAACCCTCATGTCAAAGAGGTAGCCAAACTAGCAACAGACTTGGAATCTGGCATGGTTACAATATCAGCTCAGGTTGAGGCTGAACTTGCTGAACTGCCATTAGAAGAGAGAGTCGAATATCTAAAATCCCTTGGTGTTACTGAAAGTGGACTAGGAAATTTGGTAAAGGCAACATATGACCTTCTGGGATTGAGGACTTATTTCACAACTGGAGATAAGGAAACAAAAGCTTGGACTATTCTTGCAGGCATGACTGCACCTCAAGCAGCAGGAGTTATTCACAGTGACTTTCAGAAAGGCTTCATTAGAGCTGAAACTGTATCATATGATGATTTTGTCGCGGCGGGTTCTCTTGGAGTTGCAAGGGAGAAGGGATTGTTGAGGTTGGAAGGGAAGGATTACATCGTGCAGGAAGGCGATGTCATGCTTTTCCGGTTCAACGTTTGACAACAACTCAACAATAATAGCAGCAGCGAGAAGTTTCAATATATACTCGAATTTTGCACAAGAGAGAAACAGATCATGGGATTTTTTTTTGTCTGAGACATTAACTGTACTTGCGTCATTGGAACTTTGCGGCATCATTGCTTTAGCCCATGGCTTTGTAAATCATTCAAGATAAGCTCTCTACGAAACATTAGAGTATAATTCGACATACCTACTTATAAACTGTCATTTGAAGCATTGTAATCTTCAATCGAAAATTTGATGCGAAAAAAAAAAGA]


>consensus_9475#1 GCTCCGCGCCGCCGCCTCCGCCGCTGCCGCCGCGCGGGCGTACGTGTCTATGGCGACGAT GTCTCGCCGCGCACTCGGCTCTGCGTTCGCGGGATTCACGCGGACACCAGCTATGACTCC GACGGCCACCTTGCCTTCCTCGTGCGCGTCCCCGGCGCGTCTCCTGCGGTGGCGCCGGAG CGCGGGTGTAGGCGCCCGGCGGTTCGCGTCCGGCCGCAACGCGCGGATTAGCATGAGCCT CCGCGCCGGCATCGTCGGCCTGCCCAACGTCGGCAAGTCCACACTCTTCAATGCCATTGT TGAAAATGGGAAGGCACAAGCTGCAAACTTTCCCTTCTGCACCATAAACCCCAACGTTGG TGTTGTGGCTATCCCAGATGCTCGCTTGCATGTGCTCTCAAAATTAAGCAAGTCTAAGGA GACAATCCCAACATCCATAGAGCTTGTGGATATTGCAGGTCTCGTCAAAGGAGCAAGCAA AGGAGAGGGACTAGGAAACCAATTTCTTTCGAACATCCGTGAGGTTGATTCCATCCTTCA GGTTGTGCGATGTTTTGAAGATGATGATATTGTTCATGTGAGTGGGAAAGTTGATCCCAA ATCAGATATTGATGTAATTAATCTGGAGCTTATATTTTCTGATCTTGACCAGATAGAGAA AAGACTGGATAAGCTTAAAAAGAGCAAAACTAAAGACCAGCAAGTAAAGGTCAAGGAACA AGCAGAGAGGACTGGATTGGAAAAAATTCAGACTGTACTTATGGATGGAAAACCTGCTAG ATCTGTTGATTTGGCTGACCATGAGAAAGAAGCTATCCAACATCTTTGTCTACTAACTAT GAAACCTGTCATTTATGGTGCCAACGTAACTGAATCTGATCTTGCTGAACCTGGTAACAA CCCTCATGTCAAAGAGGTAGCCAAACTAGCAACAGACTTGGAATCTGGCATGGTTACAAT ATCAGCTCAGGTTGAGGCTGAACTTGCTGAACTGCCATTAGAAGAGAGAGTCGAATATCT AAAATCCCTTGGTGTTACTGAAAGTGGACTAGGAAATTTGGTAAAGGCAACATATGACCT TCTGGGATTGAGGACTTATTTCACAACTGGAGATAAGGAAACAAAAGCTTGGACTATTCT TGCAGGCATGACTGCACCTCAAGCAGCAGGAGTTATTCACAGTGACTTTCAGAAAGGCTT CATTAGAGCTGAAACTGTATCATATGATGATTTTGTCGCGGCGGGTTCTCTTGGAGTTGC AAGGGAGAAGGGATTGTTGAGGTTGGAAGGGAAGGATTACATCGTGCAGGAAGGCGATGT CATGCTTTTCCGGTTCAACGTTTGACAACAACTCAACAATAATAGCAGCAGCGAGAAGTT TCAATATATACTCGAATTTTGCACAAGAGAGAAACAGATCATGGGATTTTTTTTTGTCTG AGACATTAACTGTACTTGCGTCATTGGAACTTTGCGGCATCATTGCTTTAGCCCATGGCT TTGTAAATCATTCAAGATAAGCTCTCTACGAAACATTAGAGTATAATTCGACATACCTAC TTATAAACTGTCATTTGAAGCATTGTAATCTTCAATCGAAAATTTGATGCGAAAAAAAAA AGA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9475#0      CACGTGCCATCTCATCTACTCTATCTCTCACCTCCGCCCGCCTCGTCGTCTCTCTGACAA 60
consensus_9475#1      ------------------------------------------------------------
                                                                                  

consensus_9475#0      CCGTACAGCCGCCCGCCTTCCGCTCCGCGCCGCCGCCTCCGCCGCTGCCGCCGCGCGGGC 120
consensus_9475#1      ------------------------------------------------------------
                                                                                  

consensus_9475#0      GTACGTGTCTATGGCGACGATGTCTCGCCGCGCACTCGGCTCTGCGTTCGCGGGATTCAC 180
consensus_9475#1      ------------------------------------------------------------
                                                                                  

consensus_9475#0      GCGGACACCAGCTATGACTCCGACGGCCACCTTGCCTTCCTCGTGCGCGTCCCCGGCGCG 240
consensus_9475#1      ------------------------------------------------------------
                                                                                  

consensus_9475#0      TCTCCTGCGGTGGCGCCGGAGCGCGGGTGTAGGCGCCCGGCGGTTCGCGTCCGGCCGCAA 300
consensus_9475#1      ------------------------------------------------------------
                                                                                  

consensus_9475#0      CGCGCGGATTAGCATGAGCCTCCGCGCCGGCATCGTCGGCCTGCCCAACGTCGGCAAGTC 360
consensus_9475#1      ------------------------------------------------------------
                                                                                  

consensus_9475#0      CACACTCTTCAATGCCATTGTAAGGAACCTTCCCTCTGCTTCTTCCGAAGAATTCCGTGC 420
consensus_9475#1      ------------------------------------------------------------
                                                                                  

consensus_9475#0      TGTTATGAACTCGTTTTTAGCTGGAAGCAACTCGAGGAGAAAGAAGGCGATCTTGATTAT 480
consensus_9475#1      ------------------------------------------------------------
                                                                                  

consensus_9475#0      TTGTGCTTTTGAGGAGTTCTTCTCGATTCATGGATTGGTTTTGGTCGAGGATGAAGTGGG 540
consensus_9475#1      ----------------------------------------------------------GC 2
                                                                                * 

consensus_9475#0      TATGCGGCGTCAATGGAACTGCGCATCAACTGTTTGATTCTTTGCCACACAGAGATGCAG 600
consensus_9475#1      TCCGCGCCGCCGCCTCCGC--CGCTGCCGCCGCGCGGGCGTACGT-GTCTATGGCGACGA 59
                      *  *** ** *       *  ***  *  * *   *    *  *      *  *   *  

consensus_9475#0      CTCTCCAACGTTTGACTAGTTATGAACTTATGATGCTTAACTTAGATAGGACTCGTCACA 660
consensus_9475#1      TGTCTCGCCGCGCACTCGGCTCTGCGTTCGCGG-GATTCACGCGGACA---CCAGCTATG 115
                           *  **        * * **   *   *  * ** **   ** *   *  *  *  

consensus_9475#0      GATTTTTTTGC-ACTGAATTTTCATTTCCCTAGCTGCAGGAGTG-CTTTTGCAGTCGTGA 718
consensus_9475#1      ACTCCGACGGCCACCTTGCCTTCCTCGTGCGCGTCCCCGGCGCGTCTCCTGCGGTGGCGC 175
                        *      ** **      *** *    *  *   * ** * * **  *** ** * * 

consensus_9475#0      TGATTGTTTGATG-GGAAGTATAGTGAATCTTTAACGCATGAAAATGCAACTGCCGTATT 777
consensus_9475#1      CGGAGCGCGGGTGTAGGCGCCCGGCGGTTC------GCGTCCGGCCGCAACGCGCGGATT 229
                       *       * **  *  *    * *  **      ** *      *****   ** ***

consensus_9475#0      GCACGGGACATGCCATTCCTCGCAATAATGTGCATGCTATTGTTGATTACGTTGTAACAT 837
consensus_9475#1      ------AGCATGAGCCTCCGCGCCGGCATCGTCGGCCTGCC-----CAACGTCGGCAAGT 278
                              ****    *** ***    **   *   **          **** *  *  *

consensus_9475#0      GAATTCTTTTGTCAACGTTGTCAGGTTGAAAATGGGAAGGCACAAGCTGCAAACTTTCCC 897
consensus_9475#1      CCACACTCT--TCAATGCCATT--GTTGAAAATGGGAAGGCACAAGCTGCAAACTTTCCC 334
                        *  ** *  **** *   *   ************************************

consensus_9475#0      TTCTGCACCATAAACCCCAACGTTGGTGTTGTGGCTATCCCAGATGCTCGCTTGCATGTG 957
consensus_9475#1      TTCTGCACCATAAACCCCAACGTTGGTGTTGTGGCTATCCCAGATGCTCGCTTGCATGTG 394
                      ************************************************************

consensus_9475#0      CTCTCAAAATTAAGCAAGTCTAAGGAGACAATCCCAACATCCATAGAGCTTGTGGATATT 1017
consensus_9475#1      CTCTCAAAATTAAGCAAGTCTAAGGAGACAATCCCAACATCCATAGAGCTTGTGGATATT 454
                      ************************************************************

consensus_9475#0      GCAGGTCTCGTCAAAGGAGCAAGCAAAGGAGAGGGACTAGGAAACCAATTTCTTTCGAAC 1077
consensus_9475#1      GCAGGTCTCGTCAAAGGAGCAAGCAAAGGAGAGGGACTAGGAAACCAATTTCTTTCGAAC 514
                      ************************************************************

consensus_9475#0      ATCCGTGAGGTTGATTCCATCCTTCAGGCCTTTTCAGGTTGTGCGATGTTTTGAAGATGA 1137
consensus_9475#1      ATCCGTGAGGTTGATTCCATCCTTCAGG----------TTGTGCGATGTTTTGAAGATGA 564
                      ****************************          **********************

consensus_9475#0      TGATATTGTTCATGTGAGTGGGAAAGTTGATCCCAAATCAGATATTGATGTAATTAATCT 1197
consensus_9475#1      TGATATTGTTCATGTGAGTGGGAAAGTTGATCCCAAATCAGATATTGATGTAATTAATCT 624
                      ************************************************************

consensus_9475#0      GGAGCTTATATTTTCTGATCTTGACCAGATAGAGAAAAGACTGGATAAGCTTAAAAAGAG 1257
consensus_9475#1      GGAGCTTATATTTTCTGATCTTGACCAGATAGAGAAAAGACTGGATAAGCTTAAAAAGAG 684
                      ************************************************************

consensus_9475#0      CAAAACTAAAGACCAGCAAGTAAAGGTCAAGGAACAAGCAGAGAGGACTGGATTGGAAAA 1317
consensus_9475#1      CAAAACTAAAGACCAGCAAGTAAAGGTCAAGGAACAAGCAGAGAGGACTGGATTGGAAAA 744
                      ************************************************************

consensus_9475#0      AATTCAGACTGTACTTATGGATGGAAAACCTGCTAGATCTGTTGATTTGGCTGACCATGA 1377
consensus_9475#1      AATTCAGACTGTACTTATGGATGGAAAACCTGCTAGATCTGTTGATTTGGCTGACCATGA 804
                      ************************************************************

consensus_9475#0      GAAAGAAGCTATCCAACATCTTTGTCTACTAACTATGAAACCTGTCATTTATGTTGCCAA 1437
consensus_9475#1      GAAAGAAGCTATCCAACATCTTTGTCTACTAACTATGAAACCTGTCATTTATGGTGCCAA 864
                      ***************************************************** ******

consensus_9475#0      CGTAACTGAATCTGATCTTGCTGAACCTGGTAACAACCCTCATGTCAAAGAGGTAGCCAA 1497
consensus_9475#1      CGTAACTGAATCTGATCTTGCTGAACCTGGTAACAACCCTCATGTCAAAGAGGTAGCCAA 924
                      ************************************************************

consensus_9475#0      ACTAGCAACAGACTTGGAATCTGGCATGGTTACAATATCAGCTCAGGTTGAGGCTGAACT 1557
consensus_9475#1      ACTAGCAACAGACTTGGAATCTGGCATGGTTACAATATCAGCTCAGGTTGAGGCTGAACT 984
                      ************************************************************

consensus_9475#0      TGCTGAACTGCCATTAGAAGAGAGAGTCGAATATCTAAAATCCCTTGGTGTTACTGAAAG 1617
consensus_9475#1      TGCTGAACTGCCATTAGAAGAGAGAGTCGAATATCTAAAATCCCTTGGTGTTACTGAAAG 1044
                      ************************************************************

consensus_9475#0      TGGACTAGGAAATTTGGTAAAGGCAACATATGACCTTCTGGGATTGAGGACTTATTTCAC 1677
consensus_9475#1      TGGACTAGGAAATTTGGTAAAGGCAACATATGACCTTCTGGGATTGAGGACTTATTTCAC 1104
                      ************************************************************

consensus_9475#0      AACTGGAGATAAGGAAACAAAAGCTTGGACTATTCTTGCAGGCATGACTGCACCTCAAGC 1737
consensus_9475#1      AACTGGAGATAAGGAAACAAAAGCTTGGACTATTCTTGCAGGCATGACTGCACCTCAAGC 1164
                      ************************************************************

consensus_9475#0      AGCAGGAGTTATTCACAGTGACTTTCAGAAAGGCTTCATTAGAGCTGAAACTGTATCATA 1797
consensus_9475#1      AGCAGGAGTTATTCACAGTGACTTTCAGAAAGGCTTCATTAGAGCTGAAACTGTATCATA 1224
                      ************************************************************

consensus_9475#0      TGATGATTTTGTCGCGGCGGGTTCTCTTGGAGTTGCAAGGGAGAAGGGATTGTTGAGGTT 1857
consensus_9475#1      TGATGATTTTGTCGCGGCGGGTTCTCTTGGAGTTGCAAGGGAGAAGGGATTGTTGAGGTT 1284
                      ************************************************************

consensus_9475#0      GGAAGGGAAGGATTACATCGTGCAGGAAGGCGATGTCATGCTTTTCCGGTTCAACGTTTG 1917
consensus_9475#1      GGAAGGGAAGGATTACATCGTGCAGGAAGGCGATGTCATGCTTTTCCGGTTCAACGTTTG 1344
                      ************************************************************

consensus_9475#0      ACAACAACTCAACAATAATAGCAGCAGCGAGAAGTTTCAATATATACTCGAATTTTGCAC 1977
consensus_9475#1      ACAACAACTCAACAATAATAGCAGCAGCGAGAAGTTTCAATATATACTCGAATTTTGCAC 1404
                      ************************************************************

consensus_9475#0      AAGAGAGAAACAGATCATGGGATTTTTTTTTGTCTGAGACATTAACTGTACTTGCGTCAT 2037
consensus_9475#1      AAGAGAGAAACAGATCATGGGATTTTTTTTTGTCTGAGACATTAACTGTACTTGCGTCAT 1464
                      ************************************************************

consensus_9475#0      TGGAACTTTGCGGCATCATTGCTTTAGCCCATGGCTTTGTAAATCATTCAAGATAAGCTC 2097
consensus_9475#1      TGGAACTTTGCGGCATCATTGCTTTAGCCCATGGCTTTGTAAATCATTCAAGATAAGCTC 1524
                      ************************************************************

consensus_9475#0      TCTACGAAACATTAGAGTATAATTCGACATACCTACTTATAAACTGTCATTTGAA-CATT 2156
consensus_9475#1      TCTACGAAACATTAGAGTATAATTCGACATACCTACTTATAAACTGTCATTTGAAGCATT 1584
                      ******************************************************* ****

consensus_9475#0      GTAATCTTCAATCGAAAATTTGATGCGACATCTTTTTTAAGTGTTNAAAA 2206
consensus_9475#1      GTAATCTTCAATCGAAAATTTGATGCGAAAAAAAAAAGA----------- 1623
                      **************************** *        *           




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)