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Oryza sativa
cluster # 9478 cluster # 9478       Sequences # 6       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9478#0 length = 1614 sequences # 6  

consensusID : consensus_9478#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1614
fasta sequence
                              [ACCCGCAAAAAGGACACCACCGCCGCAGCCCAAGCCCACCACCACCACCGCCGCCGCGCGGACCAACCAACCAATCACTCGCTCGCCGCCGGCCATGTCCGCCGCCGCCGCCTCCTCCGCGGCGGGGGACTCCGCCAAGCAGCCGCTCCTCCACCACCAGCGCGGGAACCCTCCCCACGTCGCGTCGGTCTCCTCCCCGTCTCTCCCCTCGGCTCCCCCGGGGGCCCTCGCGGGCGGCCGCCGCTTCCCCGGCGGCCTCGACGTCCCCAACCTCAAGAAGCGCGGCGGCGGGACGCGGAGCTGGATCCGCGTCGAGGCCGCCACGGCGTCCGTGCAGACGCTGGAAGTGGACAAGGCCACCATGATGCGGCGGTGCGAGCTCCCCGCCCGCGACCTCCGCCTCCTCGACCCGCTCTTCGTCTACCCCTCCACCATCCTCGGGAGGGAGCGCGCCATCGTCGTCAACCTCGAGCAGATCCGCTGCGTCATCACCGCCGACGAGGTGCTCCTCCTCAACTCCCTCGACAGCTACGTCCTCCAGTACGCCGCCGAGCTGCAGCGCCGCCTCCTCCAGCGCGCCGAGGGCGACGAGCTCCCCTTCGAATTCCGCGCGCTCGAGCTCGCCCTCGAGGCCGCCTGCTCCTTCCTCGACGCACAGGCAGCTGAATTGGAAATTGAAGCATATCCCTTGTTAGATGAGCTGACATCCAAAATCAGTACACTGAATTTGGAACGTGTACGGCGATTAAAAAGTAGGCTAGTTGCTCTGACGAGAAGAGTCCAGAAGGTCAGGGATGAAATAGAGCAGCTAATGGATGACGACGGAGATATGGCCGAGATGTATCTCAGTGAGAAGAAGTTGAGAACGGAGGCATCCTTCTATGGCGATCAGTCTATGTTAGGCTACAATTCAGTAGGTGATGGGACATCGTTTTCAGCTCCTGTATCTCCTGTCTCGTCACCCACAGAATCACGGAAGTTGGAGAAAGCTTTCAGCTTGTGTAGGAGTAGGCATGACAGTGTGAAGAGCTCAGATAACACAGCAACAGAACATATTCAAGAGCTGGAAATGTTACTGGAAGCATATTTCGTTGTGATTGACAGCACTCTCAACAAGCTAACATCGCTGAAGGAGTACATTGATGACACTGAAGATTTTATCAACATTCAGTTGGACAATGTTCGGAACCAACTGATCCAATTCGAACTTTTACTCACAACTGCAACATTTGTTGTCGCCATTTTTGGAGTGGTTGCTGGGATATTTGGGATGAACTTCGAGACCTCAGTTTTCAGCATACAGAATGCATTCCAGTGGGTGCTCATCATCACTGGGGTGATCGGCGCTTTCATCTTCTGCGGATTCCTATGGTTCTTCAAGTACAAAAGGCTGATGCCCCTGTAGATGATCATAGCATCCATAGGACCAATGAATCAAACTCAATTGTCGTCTACGCTGTTGAGGTACTTGATCAGAAGCCTGAATTTCTGCCCGATGTAAATTACCATTCTTTTAGAATTCTACAGCATACCTACCAAAGAAATTGAATGAAAAACAAAAGTTTTCATACCACGAGGCCTCTACTAAAAAGGGGTGATATTATAGGAAAAATA]

[+] EMBL AK071905             [ACCCGCAAAAAGGACACCACCGCCGCAGCCCAAGCCCACCACCACCACCGCCGCCGCGCGGACCAACCAACCAATCACTCGCTCGCCGCCGGCCATGTCCGCCGCCGCCGCCTCCTCCGCGGCGGGGGACTCCGCCAAGCAGCCGCTCCTCCACCACCAGCGCGGGAACCCTCCCCACGTCGCGTCGGTCTCCTCCCCGTCTCTCCCCTCGGCTCCCCCGGGGGCCCTCGCGGGCGGCCGCCGCTTCCCCGGCGGCCTCGACGTCCCCAACCTCAAGAAGCGCGGCGGCGGGACGCGGAGCTGGATCCGCGTCGAGGCCGCCACGGCGTCCGTGCAGACGCTGGAAGTGGACAAGGCCACCATGATGCGGCGGTGCGAGCTCCCCGCCCGCGACCTCCGCCTCCTCGACCCGCTCTTCGTCTACCCCTCCACCATCCTCGGGAGGGAGCGCGCCATCGTCGTCAACCTCGAGCAGATCCGCTGCGTCATCACCGCCGACGAGGTGCTCCTCCTCAACTCCCTCGACAGCTACGTCCTCCAGTACGCCGCCGAGCTGCAGCGCCGCCTCCTCCAGCGCGCCGAGGGCGACGAGCTCCCCTTCGAATTCCGCGCGCTCGAGCTCGCCCTCGAGGCCGCCTGCTCCTTCCTCGACGCACAGGCAGCTGAATTGGAAATTGAAGCATATCCCTTGTTAGATGAGCTGACATCCAAAATCAGTACACTGAATTTGGAACGTGTACGGCGATTAAAAAGTAGGCTAGTTGCTCTGACGAGAAGAGTCCAGAAGGTCAGGGATGAAATAGAGCAGCTAATGGATGACGACGGAGATATGGCCGAGATGTATCTCAGTGAGAAGAAGTTGAGAACGGAGGCATCCTTCTATGGCGATCAGTCTATGTTAGGCTACAATTCAGTAGGTGATGGGACATCGTTTTCAGCTCCTGTATCTCCTGTCTCGTCACCCACAGAATCACGGAAGTTGGAGAAAGCTTTCAGCTTGTGTAGGAGTAGGCATGACAGTGTGAAGAGCTCAGATAACACAGCAACAGAACATATTCAAGAGCTGGAAATGTTACTGGAAGCATATTTCGTTGTGATTGACAGCACTCTCAACAAGCTAACATCGCTGAAGGAGTACATTGATGACACTGAAGATTTTATCAACATTCAGTTGGACAATGTTCGGAACCAACTGATCCAATTCGAACTTTTACTCACAACTGCAACATTTGTTGTCGCCATTTTTGGAGTGGTTGCTGGGATATTTGGGATGAACTTCGAGACCTCAGTTTTCAGCATACAGAATGCATTCCAGTGGGTGCTCATCATCACTGGGGTGATCGGCGCTTTCATCTTCTGCGGATTCCTATGGTTCTTCAAGTACAAAAGGCTGATGCCCCTGTAGATGATCATAGCATCCATAGGACCAATGAATCAAACTCAATTGTCGTCTACGCTGTTGAGGTACTTGATCAGAAGCCTGAATTTCTGCCCGATGTAAATTACCATTCTTTTAGAATTCTACAGCATACCTACCAAAGAAATTGAATGAAAAACAAAAGTTTTCATACCACGAGGCCTCTACTAAAAAGGGGTGATATTATAGGAAAAATA]
[+] EMBL AK099209             [ACCCGCAAAAAGGACACCACCGCCGCAGCCCAAGCCCACCACCACCACCGCCGCCGCGCGGACCAACCAACCAATCACTCGCTCGCCGCCGGCCATGTCCGCCGCCGCCGCCTCCTCCGCGGCGGGGGACTCCGCCAAGCAGCCGCTCCTCCACCACCAGCGCGGGAACCCTCCCCACGTCGCGTCGGTCTCCTCCCCGTCTCTCCCCTCGGCTCCCCCGGGGGCCCTCGCGGGCGGCCGCCGCTTCCCCGGCGGCCTCGACGTCCCCAACCTCAAGAAGCGCGGCGGCGGGACGCGGAGCTGGATCCGCGTCGAGGCCGCCACGGCGTCCGTGCAGACGCTGGAAGTGGACAAGGCCACCATGATGCGGCGGTGCGAGCTCCCCGCCCGCGACCTCCGCCTCCTCGACCCGCTCTTCGTCTACCCCTCCACCATCCTCGGGAGGGAGCGCGCCATCGTCGTCAACCTCGAGCAGATCCGCTGCGTCATCACCGCCGACGAGGTGCTCCTCCTCAACTCCCTCGACAGCTACGTCCTCCAGTACGCCGCCGAGCTGCAGCGCCGCCTCCTCCAGCGCGCCGAGGGCGACGAGCTCCCCTTCGAATTCCGCGCGCTCGAGCTCGCCCTCGAGGCCGCCTGCTCCTTCCTCGACGCACAGGCAGCTGAATTGGAAATTGAAGCATATCCCTTGTTAGATGAGCTGACATCCAAAATCAGTACACTGAATTTGGAACGTGTACGGCGATTAAAAAGTAGGCTAGTTGCTCTGACGAGAAGAGTCCAGAAGGTCAGGGATGAAATAGAGCAGCTAATGGATGACGACGGAGATATGGCCGAGATGTATCTCAGTGAGAAGAAGTTGAGAACGGAGGCATCCTTCTATGGCGATCAGTCTATGTTAGGCTACAATTCAGTAGGTGATGGGACATCGTTTTCAGCTCCTGTATCTCCTGTCTCGTCACCCACAGAATCACGGAAGTTGGAGAAAGCTTTCAGCTTGTGTAGGAGTAGGCATGACAGTGTGAAGAGCTCAGATAACACAGCAACAGAACATATTCAAGAGCTGGAAATGTTACTGGAAGCATATTTCGTTGTGATTGACAGCACTCTCAACAAGCTAACATCGCTGAAGGAGTACATTGATGACACTGAAGATTTTATCAACATTCAGTTGGACAATGTTCGGAACCAACTGATCCAATTCGAACTTTTACTCACAACTGCAACATTTGTTGTCGCCATTTTTGGAGTGGTTGCTGGGATATTTGGGATGAACTTCGAGACCTCAGTTTTCAGCATACAGAATGCATTCCAGTGGGTGCTCATCATCACTGGGGTGATCGGCGCTTTCATCTTCTGCGGATTCCTATGGTTCTTCAAGTACAAAAGGCTGATGCCCCTGTAGATGATCATAGCATCCATAGGACCAATGAATCAAACTCAATTGTCGTCTACGCTGTTGAGGTACTTGATCAGAAGCCTGAATTTCTGCCCGATGTAAATTACCATTCTTTTAGAATTCTACAGCATACCTACCAAAGAAATTGAATGAAAAACAAAAGTTTTCATACCACGAGGCCTCTACTAAAAAGGGGTGATATTATAGGAAAAATA]
[+] EMBL AK099071             [                                                                        AATCACTCGCTCGCCGCCGGCCATGTCCGCCGCCGCCGCCTCCTCCGCGGCGGGGGACTCCGCCAAGCAGCCGCTCCTCCACCACCAGCGCGGGAACCCTCCCCACGTCGCGTCGGTCTCCTCCCCGTCTCTCCCCTCGGCTCCCCCGGGGGCCCTCGCGGGCGGCCGCCGCTTCCCCGGCGGCCTCGACGTCCCCAACCTCAAGAAGCGCGGCGGCGGGACGCGGAGCTGGATCCGCGTCGAGGCCGCCACGGCGTCCGTGCAGACGCTGGAAGTGGACAAGGCCACCATGATGCGGCGGTGCGAGCTCCCCGCCCGCGACCTCCGCCTCCTCGACCCGCTCTTCGTCTGCCCCTCCACCATCCTCGGGAGGGAGCGCGCCATCGTCGTCAACCTCGAGCAGATCCGCTGCGTCATCACCGCCGACGAGGTGCTCCTCCTCAACTCCCTCGACAGCTACGTCCTCCAGTACGCCGCCGAGCTGCAGCGCCGCCTCCTCCAGCGCGCCGAGGGCGACGAGCTCCCCTTCGAATTCCGCGCGCTCGAGCTCGCCCTCGAGGCCGCCTGCTCCTTCCTCGACGCACAGGCAGCTGAATTGGAAATTGAAGCATATCCCTTGTTAGATGAGCTGACATCCAAAATCAGTACACTGAATTTGGAACGTGTACGGCGATTAAAAAGTAGGCTAGTTGCTCTGACGAGAAGAGTCCAGAAGGTCAGGGATGAAATAGAGCAGCTAATGGATGACGACGGAGATATGGCCGAGATGTATCTCAGTGAGAAGAAGTTGAGAACGGAGGCATCCTTCTATGGCGATCAGTCTATGTTAGGCTACAATTCAGTAGGTGATGGGACATCGTTTTCAGCTCCTGTATCTCCTGTCTCGTCACCCACAGAATCACGGAAGTTGGAGAAAGCTTTCAGCTTGTGTAGGAGTAGGCATGACAGTGTGAAGAGCTCAGATAACACAGCAACAGAACATATTCAAGAGCTGGAAATGTTACTGGAAGCATATTTCGTTGTGATTGACAGCACTCTCAACAAGCTAACATCGCTGAAGGAGTACATTGATGACACTGAAGATTTTATCAACATTCAGTTGGACAATGTTCGGAACCAACTGATCCAATTCGAACTTTTACTCACAACTGCAACATTTGTTGTCGCCATTTTTGGAGTGGTTGCTGGGATATTTGGGATGAACTTCGAGACCTCAGTTTTCAGCATACAGAATGCATTCCAGTGGGTGCTCATCATCACTGGGGTGATCGGCGCTTTCATCTTCTGCGGATTCCTATGGTTCTTCAAGTACAAAAGGCTGATGCCCCTGTAGATGATCATAGCATCCATAGGACCAATGAATCAAACTCAATTGTCGTCTACGCTGTTGAGGTACTTGATCAGAAGCCTGAATTTCTGCCCGATGTAAATTACCATTCTTTTAGAATTCTACAGCATACCTACCAAAGAAATTGAATGAAAAAC                                                         ]
[+] EMBL AU070386             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      AACTGATCCAATTCGAACTTTTACTCACAACTGCAACATTTGTTGTCGCCATTTTTGGAGTGGTTGCTGGGATATTTGGGATGAACTTCGAGACCTCAGTTTTCAGCATACAGAATGCATTCCAGTGGGTGCTCATCATCACTGGGGTGATCGGCGCTTTCATCTTCTGCGGATTCCTATGGTTCTTCAAGTACAAAAGGCTGATGCCCCTGTAGATGATCATAGCATCCATAGGACCAATGAATCAAACTCAATTGTCGTCTACGCTGTTGAGGTACTTGATCAGAAGCCTGAATTTCTGCCCGATGTAAATTACCATTCTTTTAGAATTCTACAGCATACCTACCAAAGAAATTGAATGAAAAACAAAAGT                                                   ]
[+] EMBL OSS13725A            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      AACTGANCCAATTCGAACTTTTACTCACAACTGCAACATTTGTTGTCGCCATTNTTGGAGTGGTTGCTGGGATATTTGGGATGAACTTCGAGACCTCAGTTTTCAGCATACAGAATGCATTCCAGTGGGTGCTCATCATCACTGGGGTGATCGGCGNTTTCATCTTCTGCGGATTCCTATGGTTCTTCAAGTACAAAAGGCTGATGCCCCTGTAGATGATCATAGCATCCATAGGACCAATGAATCAAACTCAATTGTCGTCTACGCTGTTGAGGTACTT                                                                                                                                                ]
[+] EMBL AU096457             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ACTGATCCAATTCGAACTTTTACTCACAACTGCAACATTTGTTGTCGCCATTTTTGGAGTGGTTGCTGGGATATTTGGGATGAACTTCGAGACCTCAGTTTTCAGCATACAGAATGCATTCCAGTGGGTGCTCATCATCACTGGGGTGATCGGCGCTTTCATCTTCTGCGGATTCCTATGGTTCTTCAAGTACAAAAGGCTGATGCCCCTGTAGATGATCATAGCATCCATAGGACCAATGAATCAAACTCAATTGTCGTCTACGCTGTTGAGGTACTTGATCAGAAGCCTGAATTTCTGCCCGATGTAAATTACCATTCTTTTAGAATTCTACAGCATACCTACCAAAGAAATTGAATGAAAAACAAAAGTTTTCATACCAaaaaaaaa                                 ]


>consensus_9478#0 ACCCGCAAAAAGGACACCACCGCCGCAGCCCAAGCCCACCACCACCACCGCCGCCGCGCG GACCAACCAACCAATCACTCGCTCGCCGCCGGCCATGTCCGCCGCCGCCGCCTCCTCCGC GGCGGGGGACTCCGCCAAGCAGCCGCTCCTCCACCACCAGCGCGGGAACCCTCCCCACGT CGCGTCGGTCTCCTCCCCGTCTCTCCCCTCGGCTCCCCCGGGGGCCCTCGCGGGCGGCCG CCGCTTCCCCGGCGGCCTCGACGTCCCCAACCTCAAGAAGCGCGGCGGCGGGACGCGGAG CTGGATCCGCGTCGAGGCCGCCACGGCGTCCGTGCAGACGCTGGAAGTGGACAAGGCCAC CATGATGCGGCGGTGCGAGCTCCCCGCCCGCGACCTCCGCCTCCTCGACCCGCTCTTCGT CTACCCCTCCACCATCCTCGGGAGGGAGCGCGCCATCGTCGTCAACCTCGAGCAGATCCG CTGCGTCATCACCGCCGACGAGGTGCTCCTCCTCAACTCCCTCGACAGCTACGTCCTCCA GTACGCCGCCGAGCTGCAGCGCCGCCTCCTCCAGCGCGCCGAGGGCGACGAGCTCCCCTT CGAATTCCGCGCGCTCGAGCTCGCCCTCGAGGCCGCCTGCTCCTTCCTCGACGCACAGGC AGCTGAATTGGAAATTGAAGCATATCCCTTGTTAGATGAGCTGACATCCAAAATCAGTAC ACTGAATTTGGAACGTGTACGGCGATTAAAAAGTAGGCTAGTTGCTCTGACGAGAAGAGT CCAGAAGGTCAGGGATGAAATAGAGCAGCTAATGGATGACGACGGAGATATGGCCGAGAT GTATCTCAGTGAGAAGAAGTTGAGAACGGAGGCATCCTTCTATGGCGATCAGTCTATGTT AGGCTACAATTCAGTAGGTGATGGGACATCGTTTTCAGCTCCTGTATCTCCTGTCTCGTC ACCCACAGAATCACGGAAGTTGGAGAAAGCTTTCAGCTTGTGTAGGAGTAGGCATGACAG TGTGAAGAGCTCAGATAACACAGCAACAGAACATATTCAAGAGCTGGAAATGTTACTGGA AGCATATTTCGTTGTGATTGACAGCACTCTCAACAAGCTAACATCGCTGAAGGAGTACAT TGATGACACTGAAGATTTTATCAACATTCAGTTGGACAATGTTCGGAACCAACTGATCCA ATTCGAACTTTTACTCACAACTGCAACATTTGTTGTCGCCATTTTTGGAGTGGTTGCTGG GATATTTGGGATGAACTTCGAGACCTCAGTTTTCAGCATACAGAATGCATTCCAGTGGGT GCTCATCATCACTGGGGTGATCGGCGCTTTCATCTTCTGCGGATTCCTATGGTTCTTCAA GTACAAAAGGCTGATGCCCCTGTAGATGATCATAGCATCCATAGGACCAATGAATCAAAC TCAATTGTCGTCTACGCTGTTGAGGTACTTGATCAGAAGCCTGAATTTCTGCCCGATGTA AATTACCATTCTTTTAGAATTCTACAGCATACCTACCAAAGAAATTGAATGAAAAACAAA AGTTTTCATACCACGAGGCCTCTACTAAAAAGGGGTGATATTATAGGAAAAATA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)