These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9486#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1565 fasta sequence [TAAATTTCTCTCTCTCTCTCTCCTAACAAAAATGTTTGGTGCCAAAAAAAATTAAATCAAATTCAAGTTGCGTATAAAGACCACATGGTCGATGTCTTAACGAGACGCCTTGTAATATCGTCACACTCTCGAGCTTAGCTTCCTCCTACCTTCCTCCATCCTCTTCGTCTTCCTCCTCCTCTCGATCGATCGCCTCGCGAAGTCGCGAGCTAGCCAAGAATCTCATCTCCACTACATAAGCGAGAAGCTGGAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGTGAGAGGTTAGCTAGCTAGAGATGGAGGTGATGGTGCCAGTGATGGCGCCGAGCGCGCCGTGCAGCCCAAGAACGGCGGCGGAGCACCACCACCTGCCGAGCTACTGCTACTTCTTCTCGAGCGCGCCGACGAGCCCGACGAGGGCGAGCTACTCCGGCGAGGCGGCGGCGGCGGCGGTGGGGGTGGGTGAGGGGGATGGGGCGTTCGATTTCGCGTTCGGGTTCAGTGGCCAGCTGCGGGAGTCGACGCCGATCCTCGCAGCCGCCGACGAGCTCTTCGAGGGCGGCAGGATCCGGCCGCTGAACACGCCGCACCCGAGCATTCTGCAGCTGGTGGATGATAGCGCGTACGCCTCGCCTCGGTCGCCGGGGAGGAGGCGGAGGATCGCCGCCGCGGAGGCGGCGGAG-GTGTCGTCGTCGTCGTCGTCGCAGAGAGGGAGGTCGGGCCGTGCTGCGCCTGCGTCGTCGTCGTCGAGCGCCTCGTCTCGTAGCCGGCGAGCCACGCGGTCTCTCTCACCGTTCAGGGGAGGAGGAGGCGGCGGCGCCGACGACGAGTACCCGTCCTCGCCGCCGTCGCCG-A-GGACC-TCCATGATGCGC-GGCTGCGGCAGC-GGCAG-CCGG-AAGTGGA-GGCTCAA-GGACTTGTTCC-TCTT-CCGGAGCGCGTCGGAGGGGCGCGCCACCGGTGCCGGCAGCAAGGACCCGCTCCTCAAGTACACCATGCTCTCCTCC-TCCGCCTCGTCGGCGGCCGCGGCGCTGCACCACAACCCGCAGAAGCTTCGCGGCGGCGGCGACGGCAGCGCGTCCATGCGCAAGGGCCGCGGGTCGACGGCGTCGGCCAGCGACATGCCGTACACGGTCGGCCGCGCCGCCGCCGAGGACATGCGGCGGCGCACCACGACGCCGCTGCCGTTCCACCGGAACAGCCTCTTCGGCTACCTCCGCTCCAACCCGGCCATCCACAGCATCAGCCGCAAGCTCAGCGGCTCCGGCTCCAATCGCGGCAAGACCGCCGCTTGAGCGACACGCGCCATGGCCGCCGCCGGCGAGTCGCGCGCCATACATGCACGATGCTCTCGAACCCAACCTTGCAGAGAGATGGTCAGAAAATTTGCCAAAATTCGTCCCCTTTTTTGTTTGAATTTTCAATGTATTCTTTCGTTTCCTGTGAAACCACAAGGTTTTTCATATACTAGTGTAGATATGTACGTAGTACATGGGATTCGCAAGAAATTTGGAAGTCCAAAGTATAATACGGCTCTCTTCAGTTCATCCTAC] [+] EMBL AK072031 [TAAATTTCTCTCTCTCTCTCTCCTAACAAAAATGTTTGGTGCCAAAAAAAATTAAATCAAATTCAAGTTGCGTATAAAGACCACATGGTCGATGTCTTAACGAGACGCCTTGTAATATCGTCACACTCTCGAGCTTAGCTTCCTCCTACCTTCCTCCATCCTCTTCGTCTTCCTCCTCCTCTCGATCGATCGCCTCGCGAAGTCGCGAGCTAGCCAAGAATCTCATCTCCACTACATAAGCGAGAAGCTGGAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGTGAGAGGTTAGCTAGCTAGAGATGGAGGTGATGGTGCCAGTGATGGCGCCGAGCGCGCCGTGCAGCCCAAGAACGGCGGCGGAGCACCACCACCTGCCGAGCTACTGCTACTTCTTCTCGAGCGCGCCGACGAGCCCGACGAGGGCGAGCTACTCCGGCGAGGCGGCGGCGGCGGCGGTGGGGGTGGGTGAGGGGGATGGGGCGTTCGATTTCGCGTTCGGGTTCAGTGGCCAGCTGCGGGAGTCGACGCCGATCCTCGCAGCCGCCGACGAGCTCTTCGAGGGCGGCAGGATCCGGCCGCTGAACACGCCGCACCCGAGCATTCTGCAGCTGGTGGATGATAGCGCGTACGCCTCGCCTCGGTCGCCGGGGAGGAGGCGGAGGATCGCCGCCGCGGAGGCGGCGGAG GTGTCGTCGTCGTCGTCGTCGCAGAGAGGGAGGTCGGGCCGTGCTGCGCCTGCGTCGTCGTCGTCGAGCGCCTCGTCTCGTAGCCGGCGAGCCACGCGGTCTCTCTCACCGTTCAGGGGAGGAGGAGGCGGCGGCGCCGACGACGAGTACCCGTCCTCGCCGCCGTCGCCG A GGACC TCCATGATGCGC GGCTGCGGCAGC GGCAG CCGG AAGTGGA GGCTCAA GGACTTGTTCC TCTT CCGGAGCGCGTCGGAGGGGCGCGCCACCGGTGCCGGCAGCAAGGACCCGCTCCTCAAGTACACCATGCTCTCCTCC TCCGCCTCGTCGGCGGCCGCGGCGCTGCACCACAACCCGCAGAAGCTTCGCGGCGGCGGCGACGGCAGCGCGTCCATGCGCAAGGGCCGCGGGTCGACGGCGTCGGCCAGCGACATGCCGTACACGGTCGGCCGCGCCGCCGCCGAGGACATGCGGCGGCGCACCACGACGCCGCTGCCGTTCCACCGGAACAGCCTCTTCGGCTACCTCCGCTCCAACCCGGCCATCCACAGCATCAGCCGCAAGCTCAGCGGCTCCGGCTCCAATCGCGGCAAGACCGCCGCTTGAGCGACACGCGCCATGGCCGCCGCCGGCGAGTCGCGCGCCATACATGCACGATGCTCTCGAACCCAACCTTGCAGAGAGATGGTCAGAAAATTTGCCAAAATTCGTCCCCTTTTTTGTTTGAATTTTCAATGTATTCTTTCGTTTCCTGTGAAACCACAAGGTTTTTCATATACTAGTGTAGATATGTACGTAGTACATGGGATTCGCAAGAAATTTGGA ] [+] EMBL AK107576 [ TCGTCACCCTCTCGAGCTTAGCTTCCTCCTACCTTCCTCCATCCTCTTCGTCTTCCTCCTCCTCTCGATCGATCGCCTCGCGAAGTCGCGAGCTAGCCAAGAATCTCATCTCCACTACATAAGCGAGAAGCTGGAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGTGAGAGGTTAGCTAGCTAGAGATGGAGGTGATGGTGCCAGTGATGGCGCCGAGCGCGCCGTGCAGCCCAAGAACGGCGGCGGAGCACCACCACCTGCCGAGCTACTGCTACTTCTTCTCGAGCGCGCCGACGAGCCCGACGAGGGCGAGCTACTCCGGCGAGGCGGCGGCGGCGGCGGTGGGGGTGGGTGAGGGGGATGGGGCGTTCGATTTCGCGTTCGGGTTCAGTGGCCAGCTGCGGGAGTCGACGCCGATCCTCGCAGCCGCCGACGAGCTCTTCGAGGGCGGCAGGATCCGGCCGCTGAACACGCCGCACCCGAGCATTCTGCAGCTGGTGGATGATAGCGCGTACGCCTCGCCTCGGTCGCCGGGGAGGAGGCGGAGGATCGCCGCCGCGGAGGCGGCGGAG GTGTCGTCGTCGTCGTCGTCGCAGAGAGGGAGGTCGGGCCGTGCTGCGCCTGCGTCGTCGTCGTCGAGCGCCTCGTCTCGTAGCCGGCGAGCCACGCGGTCTCTCTCACCGTTCAGGGGAGGAGGAGGCGGCGGCGCCGACGACGAGTACCCGTCCTCGCCGCCGTCGCCG A GGACC TCCATGATGCGC GGCTGCGGCAGC GGCAG CCGG AAGTGGA GGCTCAA GGACTTGTTCC TCTT CCGGAGCGCGTCGGAGGGGCGCGCCACCGGTGCCGGCAGCAAGGACCCGCTCCTCAAGTACACCATGCTCTCCTCC TCCGCCTCGTCGGCGGCCGCGGCGCTGCACCACAACCCGCAGAAGCTTCGCGGCGGCGGCGACGGCAGCGCGTCCATGCGCAAGGGCCGCGGGTCGACGGCGTCGGCCAGCGACATGCCGTACACGGTCGGCCGCGCCGCCGCCGAGGACATGCGGCGGCGCACCACGACGCCGCTGCCGTTCCACCGGAACAGCCTCTTCGGCTACCTCCGCTCCAACCCGGCCATCCACAGCATCAGCCGCAAGCTCAGCGGCTCCGGCTCCAATCGCGGCAAGACCGCCGCTTGAGCGACACGCGCCATGGCCGCCGCCGGCGAGTCGCGCGCCATACATGCACGATGCTCTCGAACCCAACCTTGCAGAGAGATGGTCAGAAAATTTGCCAAAATTCGTCCCCTTTTTTGTTTGAATTTTCAATGTATTCTTTCGTTTCCTGTGAAACCACAAGGTTTTTCATATACTAGTGTAGATATGTACGTAGTACATGGGATTCGCAAGAAATTTGGAAGTCCAAAGTATAATACGGCTCTCTTCAGTTCATCCTAC] [+] EMBL AU070916 [ TGCGGGAGTCGACGCCGATCCTCGCAGCCGCCGACGAGCTCTTCGAGGGCGGCAGGATCCGGCCGCTGAACACGCCGCACCCGAGCATTCTGCAGCTGGTGGATGATAGCGCGTACGCCTCGCCTCGGTCGCCGGGGAGGAGGCGGAGGATCGCCGCCGCGGAGGC GNGAAGNGTGTCGTCGTCGTCGTCGTCGCAGAGAGGGAGGTCGGGCCGTGCTGCGCCTGCGTCGTCGTCGTCGAGCGCCTCGTCTCGTAGCCGGCGAGCCACGCGGTCTCTCTCACCGTTCAGGGGAGGAGGAGGCGGCGGCGCCGACGACGAGTACCCGTCCTCGCCGCCGTCGCCGAA GGACCTTCCATGATGCGCGGGNTGCGGCAGCGGGCAGCCCGGAAAGTGGANGGCTCAAGGGACTTGTTCCTTCTTCCCGGAn ] [+] EMBL AU070911 [ TGCGGGAGTCGACGCCGATCCTCGCAGCCGCCGACGAGCTCTTCGAGGGCGGCAGGATCCGGCCGCTGAACACGCCGCACCCGAGCATTCTGCAGCTGGTGGATGATAGCGCGTACGCCTCGCCTCGGTCGCCGGGGAGGAGGCGGAGGATCGCCGCCGCGGAGGC GNGNAGNGTGTCGTCGTCGTCGTCGTCGCAGAGAGGGAGGTCGGGCCGTGCTGCGCCTGCGTCGTCGTCGTCGAGCGCCTCGTCTCGTAGCCGGCGAGCCACGCGGTCTCTCTCACCGTTCAGGGGAGGAGGANGCGGCGGCGCCGACGACGAGTACCCGTCCTCGCCGCCGTCNCCG AGGGACC TCCATGATGCGC GGCTGn ] [+] EMBL AU082120 [ GTCGTCGTCGTCGCAGAGAGGGNGGTCGGGCCGT NTGCGCCTGCGTCGTCGTCGTCGAGCGCCTCGTCTCGTAGCCGGCGAGCCACGCGGTCTCTCTCACCGTTCAGGGGAGGAGGAGGCGGCGGCGCCGACGACGAGTACCCGTCCTCGCCGCCGTCGCCG A GGACC TCCATGATGCGC GGCTGCGGCAGC GGCAG CCGG AAGTGGA GGCTCAA GGACTTGTTCC TCTT CCGGAGCGCGTCGGNGGGGCGCGCCACCGGTGCCGGCAGCAAGGACCCGCTCCTCAAGTACACCATGCTCTCCTCCNTNC CCTC ] [+] EMBL AU082121 [ GTCGTCGTCGTCGCAGAGAGGGAGGTCGGGCCGTG TGCGCCTGCGTCGTCGTCGTCGAGCGCCTCGTCTCGTAGCCGGCGAGCCACGCGGTCTCTCTCACCGTTCAGGGGAGGAGGAGGCGGCGGCGCCGACGACGAGTACCCGTCCTCGCCGCCGTCGCCG A GGACC TCCATGATGCGC GGCTGCGGCAGC GGCAG CCGG AAGTGGA GGCTCAA GGACTTGTTCC TCTT CCGGAGCGCGTCGGAGGGGCGCGCCACCGGTGCCGGCAGCAAGGACCCGCTCCTCAAGTACACCA ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||