cluster # 9489

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Oryza sativa
cluster # 9489 cluster # 9489 Sequences # 6 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9489#0 length = 1479 sequences # 6
consensusID : consensus_9489#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1479
fasta sequence
                              [CCCTCCTCTTGCGTTCTCGCCTCGGTCTCCAACTCTGCAACCACCGCCGTCTCTTCTCCAGATCTCCACCGCGCCATGGACGCCGCACCCACCGCGCCGCCGGCGGCGTCGGCCGACGACGAGATCGTGTACGAGTCGATGCCCTGCATCCGCATCTACAAGAACCGCGTGGAGCGCTACTTCGGCTCCGAGTTCGTCGCCGCGTCCACCGACGCCGCCACCGGCGTCGCCTCCCACGACCGCGTCATCTCCTCCAACGTCTCCGCGCGCCTCTACCTCCCCCGCCTCGACGACTCCGCCGCCGCCAAGGCCAAGCTCCCCGTGCTCGTCTACTACCACGGCGGCGGGTTCTGCCTCGGCTCGGCCTTCAACCCCACGTTCCACGCCTACTTCAACACCTTCGCCGCGCTCGCCAACGCCCTCGTCGTCTCCGTCGAGTACCGCCTCGCGCCGGAGCACCCCGTCCCGGCGGCCTACGCGGACTCGTGGGAGGCGCTCGCGTGGGTCGCCGGACACGCCGCGGGGGATGGCGACGAGGCGTGGCTCGTCGACCACGCCGACTTCTCCCGCCTCTACCTCGGCGGCGAGAGCGCCGGCTCCAACATCGCGCACCACATAGCGATGCGGGTGGCCGAGGAGGGGCTCCCCCACGGCGCCAAGATCCGGGGCCTCGTCATGATCCACCCC-TACTTCCTCGGCACTAACAGGGTGGCC-TCCGACGACCTGG-ACCCCGCCGTGCGC-GAG-AGCC-TC-GGGAGCCTGT-GGCGCG-TCATGTGCCC-GGCCACCACGGGCGAGGACGACCCGCTCATCAACCCGC-TCG-TGGACGGCGCGCCGGCGCTCGACGCGCTGGCG-TGCGACCGCGTGCTCGTGTGCATCGGCGAGGGCGACGTGCTCCGCGACCGCGGCCGCGCCTACTACGACCGGCTCACGTCGAGCGGGTGGCGCGGCGAGGCGGAGATATGGCAGGCGCCGGAGAAGGGGCACACGTTCCACCTCCTCGAGCCGCACTGCGACGCGGCCATCGCGCAGGACAAGGTCATCAGTGGCTTCCTCAACCGTTGACTCGCCGTCGCCGGCGATGACACCGTCGTCGTCGGAATCGGAGATTACCAAGATTAGCATCGGTTCATACCCAGAATAACTGCAGCTACGTCGCCGACGGATGCCGCTGCCGCGCCATACTTACTACTCCACTACTACATTTTACATTTTGGATTCAGGATTGTGTTGCATCTTTTGCAATTGGGTGTATGGATGGAAGGAAATCGCCATTGATTTAGGTGAGGGTATTGTAGTATCAGGAAGTTGGGGGAGATAAATGATAATACTACAGTCATAGACTTCATACAGATGAAATTATTCTGCTTTGTTTGACACATTGATTCATTTTCTTTGGAACTCCAGTGAAAGCATTGTTCTTAACTCTTTGCATCAAAGAATTACTTGCTTATACTCTTCAAAAAAAAAAAAAAAAAAACAGAG]

[+] EMBL AK060706             [CCCTCCTCTTGCGTTCTCGCCTCGGTCTCCAACTCTGCAACCACCGCCGTCTCTTCTCCAGATCTCCACCGCGCCATGGACGCCGCACCCACCGCGCCGCCGGCGGCGTCGGCCGACGACGAGATCGTGTACGAGTCGATGCCCTGCATCCGCATCTACAAGAACCGCGTGGAGCGCTACTTCGGCTCCGAGTTCGTCGCCGCGTCCACCGACGCCGCCACCGGCGTCGCCTCCCACGACCGCGTCATCTCCTCCAACGTCTCCGCGCGCCTCTACCTCCCCCGCCTCGACGACTCCGCCGCCGCCAAGGCCAAGCTCCCCGTGCTCGTCTACTACCACGGCGGCGGGTTCTGCCTCGGCTCGGCCTTCAACCCCACGTTCCACGCCTACTTCAACACCTTCGCCGCGCTCGCCAACGCCCTCGTCGTCTCCGTCGAGTACCGCCTCGCGCCGGAGCACCCCGTCCCGGCGGCCTACGCGGACTCGTGGGAGGCGCTCGCGTGGGTCGCCGGACACGCCGCGGGGGATGGCGACGAGGCGTGGCTCGTCGACCACGCCGACTTCTCCCGCCTCTACCTCGGCGGCGAGAGCGCCGGCTCCAACATCGCGCACCACATAGCGATGCGGGTGGCCGAGGAGGGGCTCCCCCACGGCGCCAAGATCCGGGGCCTCGTCATGATCCACCCC TACTTCCTCGGCACTAACAGGGTGGCC TCCGACGACCTGG ACCCCGCCGTGCGC GAG AGCC TC GGGAGCCTGT GGCGCG TCATGTGCCC GGCCACCACGGGCGAGGACGACCCGCTCATCAACCCGC TCG TGGACGGCGCGCCGGCGCTCGACGCGCTGGCG TGCGACCGCGTGCTCGTGTGCATCGGCGAGGGCGACGTGCTCCGCGACCGCGGCCGCGCCTACTACGACCGGCTCACGTCGAGCGGGTGGCGCGGCGAGGCGGAGATATGGCAGGCGCCGGAGAAGGGGCACACGTTCCACCTCCTCGAGCCGCACTGCGACGCGGCCATCGCGCAGGACAAGGTCATCAGTGGCTTCCTCAACCGTTGACTCGCCGTCGCCGGCGATGACACCGTCGTCGTCGGAATCGGAGATTACCAAGATTAGCATCGGTTCATACCCAGAATAACTGCAGCTACGTCGCCGACGGATGCCGCTGCCGCGCCATACTTACTACTCCACTACTACATTTTACATTTTGGATTCAGGATTGTGTTGCATCTTTTGCAATTGGGTGTATGGATGGAAGGAAATCGCCATTGATTTAGGTGAGGGTATTGTAGTATCAGGAAGTTGGGGGAGATAAATGATAATACTACAGTCATAGACTTCATACAGATGAAATTATTCTGCTTTGTTTGACACATTGATTCATTTTCTTTGGAACTCCAGTGAAAG                                                                        ]
[+] EMBL AK073975             [  CTCCTCTTGCGTTCTCGCCTCGGTCTCCAACTCTGCAACCACCGCCGTCTCTTCTCCAGATCTCCACCGCGCCATGGACGCCGCACCCACCGCGCCGCCGGCGGCGTCGGCCGACGACGAGATCGTGTACGAGTCGATGCCCTGCATCCGCATCTACAAGAACCGCGTGGAGCGCTACTTCGGCTCCGAGTTCGTCGCCGCGTCCACCGACGCCGCCACCGGCGTCGCCTCCCACGACCGCGTCATCTCCTCCAACGTCTCCGCGCGCCTCTACCTCCCCCGCCTCGACGACTCCGCTGCCGCCAAGGCCAAGCTCCCCGTGCTCGTCTACTACCACGGCGGCGGGTTCTGCCTCGGCTCGGCCTTCAACCCCACGTTCCACGCCTACTTCAACACCTTCGCCGCGCTCGCCAACGCCCTCGTCGTCTCCGTCGAGTACCGCCTCGCGCCGGAGCACCCCGTCCCGGCGGCCTACGCGGACTCGTGGGAGGCGCTCGCGTGGGTCGCCGGACACGCCGCGGGGGATGGCGACGAGGCGTGGCTCGTCGACCACGCCGACTTCTCCCGCCTCTACCTCGGCGGCGAGAGCGCCGGCTCCAACATCGCGCACCACATAGCGATGCGGGTGGCCGAGGAGGGGCTCCCCCACGGCGCCAAGATCCGGGGCCTCGTCATGATCCACCCC TACTTCCTCGGCACTAACAGGGTGGCC TCCGACGACCTGG ACCCCGCCGTGCGC GAG AGCC TC GGGAGCCTGT GGCGCG TCATGTGCCC GGCCACCACGGGCGAGGACGACCCGCTCATCAACCCGC TCG TGGACGGCGCGCCGGCGCTCGACGCGCTGGCG TGCGACCGCGTGCTCGTGTGCATCGGCGAGGGCGACGTGCTCCGCGACCGCGGCCGCGCCTACTACGACCGGCTCACGTCGAGCGGGTGGCGCGGCGAGGCGGAGATATGGCAGGCGCCGGAGAAGGGGCACACGTTCCACCTCCTCGAGCCGCACTGCGACGCGGCCATCGCGCAGGACAAGGTCATCAGTGGCTTCCTCAACCGTTGACTCGCCGTCGCCGGCGATGACACCGTCGTCGTCGGAATCGGAGATTACCAAGATTAGCATCGGTTCATACCCAGAATAACTGCAGCTACGTCGCCGACGGATGCCGCTGCCGCGCCATACTTACTACTCCACTACTACATTTTACATTTTGGATTCAGGATTGTGTTGCATCTTTTGCAATTGGGTGTATGGATGGAAGGAAATCGCCATTGATTTAGGTGAGGGTATTGTAGTATCAGGAAGTTGGGGGAGATAAATGATAATACTACAGTCATAGACTTCATACAGATGAAATTATTCT                                                                                                                       ]
[+] EMBL AU071048             [                                                                                                                                                                                                                                                                                                                                                                                                                TCGCCGCGCTCGCCAACGCCCTCGTCGTCTCCGTCGAGTACCGCCTCGCGCCGGAGCACCCCGTCCCGGCGGCCTACGCGGACTCGTGGGAGGCGCTCGCGTGGGTCGCCGGACACGCCGCGGGGGATGGCGACGAGGCGTGGCTCGTCGACCACGCCGACTTCTCCCGCCTCTACCTCGGCGGCGAGAGCGCCGGCTCCAACATCGCGCACCACATAGCGATGCGGGTGGCCGAGGAGGGGCTCCCCCACGGCGCCAAGATCCGGGGCCTCGTCATGATCCACCCCTTACTTCCTCGGCACTAACAGGGTGGCCTTCCGACGACCTGGAACCCCGCCGTGCGCGGAGAAGCCTTCGGGGAGCCTGTGGGCGCGTTCATGTGCCCGGGCCAACAAGGGCGANGACGAACCGCTCATCAAACCGCTTCGTTGGACNGTGCGCCGGCGTTCGANGCG TGGCGTTGCGACCGCGTGCTCGTGTGCATCGGCGANGGCGAAGTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL AU163480             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ACTTCTCCCGCCTCTACCTCGGCGGCGAGAGCGCCGGCTCCAACATCGCGCACCACATAGCGATGCGGGTGGCCGAGGAGGGGCTCCCCCACGGCGCCAAGATCCGGGGCCTCGTCATGATCCACCCC TACTTCCTCGGCACTAACAGGGTGGCC TCCGACGACCTGG ACCCCGCCGTGCGC GAG AGCC TC GGGAGCCTGT GGCGCG TCATGTGCCC GGCCACCACGGGCGAGGACGACCCGCTCATCAACCCGC TCG TGGACGGCGCGCCGNCGCTCGACGCGCTGGCG TGCGACCGCGTGCTCGTGTGCATCGGCGAGGGCGACGTGtcgc                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL BI305495             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GGCCGCGCCTACTACGACCGGCTCACGTCGAGCGGGTGGCGCGGCGAGGCGGAGATATGGCAGGCGCCGGAGAAGGGGCACACGTTCCACCTCCTCGAGCCGCACTGCGACGCGGCCATCGCGCAGGACAAGGTCATCAGTGGCTTCCTCAACCGTTGACTCGCCGTCGCCGGCGATGACACCGTCGTCGTCGGAATCGGAGATTACCAAGATTAGCATCGGTTCATACCCAGAATAACTGCAGCTACGTCGCCGACGGATGCCGCTGCCGCGCCATACTTACTACTCCACTACTACATTTTACATTTTGGATTCAGGATTGTGTTGCATCTTTTGCAATTGGGTGTATGGATGGAAGGAAATCGCCATTGATTTAGGTGAGGGTATTGTTGTATCAGGAAGTTGGGGGAGATAAATGATAATACTACAGTCATAGACTTCATACAGATGAAATTATACTGCTTTGTTTGACACATTGATTCATTTTCTTTGGAACTCCAGTGAAAGCATTGTTCTTAACTCTTTGCATCAAAGAATTACTTGCTTATACTCTTCAAAAAAAAAAAAAAAAAAACAGAG]
[+] EMBL BU673345             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              cttGGGCGCGCCTACTACGACCGGCTCACGTCGAGCGGGTGGCGCGGCGAGGCGGAGATATGGCAGGCGCCGGAGAAGGGGCACACGTTCCACCTCCTCGAGCCGCACTGCGACGCGGCCATCGCGCAGGACAAGGTCATCAGTGGCTTCCTCAACCGTTGACTCGCCGTCGCCGGCGATGACACCGTCGTCGTCGGAATCGGAGATTACCAAGATTAGCATCGGTTCATACCCAGAATAACTGCAGCTACGTCGCCGACGGATGCCGCTGCCGCGCCATACTTACTACTCCACTACTACATTTTACATTTTGGATTCAGGATTGTGTTGCATCTTTTGCAATTGGGTGTATGGATGGAAGGAAATCGCCATTGATTTAGGTGAGGGTATTGTTGTATCAGGAAGTTGGGGGAGATAAATGATAATACTACAGTCATAGACTTCATACAGATGAAATTATACTGCTTTGTTTGACACATTGATTCATTTTCTTTGGAACTCCAGTGAAAGCATTGTTCTTAACTCTTTGCATCAAAGAATTACTTGCTTATACTCTTCAAAAAAAAAAAAAAA         ]




>consensus_9489#0
CCCTCCTCTTGCGTTCTCGCCTCGGTCTCCAACTCTGCAACCACCGCCGTCTCTTCTCCA
GATCTCCACCGCGCCATGGACGCCGCACCCACCGCGCCGCCGGCGGCGTCGGCCGACGAC
GAGATCGTGTACGAGTCGATGCCCTGCATCCGCATCTACAAGAACCGCGTGGAGCGCTAC
TTCGGCTCCGAGTTCGTCGCCGCGTCCACCGACGCCGCCACCGGCGTCGCCTCCCACGAC
CGCGTCATCTCCTCCAACGTCTCCGCGCGCCTCTACCTCCCCCGCCTCGACGACTCCGCC
GCCGCCAAGGCCAAGCTCCCCGTGCTCGTCTACTACCACGGCGGCGGGTTCTGCCTCGGC
TCGGCCTTCAACCCCACGTTCCACGCCTACTTCAACACCTTCGCCGCGCTCGCCAACGCC
CTCGTCGTCTCCGTCGAGTACCGCCTCGCGCCGGAGCACCCCGTCCCGGCGGCCTACGCG
GACTCGTGGGAGGCGCTCGCGTGGGTCGCCGGACACGCCGCGGGGGATGGCGACGAGGCG
TGGCTCGTCGACCACGCCGACTTCTCCCGCCTCTACCTCGGCGGCGAGAGCGCCGGCTCC
AACATCGCGCACCACATAGCGATGCGGGTGGCCGAGGAGGGGCTCCCCCACGGCGCCAAG
ATCCGGGGCCTCGTCATGATCCACCCCTACTTCCTCGGCACTAACAGGGTGGCCTCCGAC
GACCTGGACCCCGCCGTGCGCGAGAGCCTCGGGAGCCTGTGGCGCGTCATGTGCCCGGCC
ACCACGGGCGAGGACGACCCGCTCATCAACCCGCTCGTGGACGGCGCGCCGGCGCTCGAC
GCGCTGGCGTGCGACCGCGTGCTCGTGTGCATCGGCGAGGGCGACGTGCTCCGCGACCGC
GGCCGCGCCTACTACGACCGGCTCACGTCGAGCGGGTGGCGCGGCGAGGCGGAGATATGG
CAGGCGCCGGAGAAGGGGCACACGTTCCACCTCCTCGAGCCGCACTGCGACGCGGCCATC
GCGCAGGACAAGGTCATCAGTGGCTTCCTCAACCGTTGACTCGCCGTCGCCGGCGATGAC
ACCGTCGTCGTCGGAATCGGAGATTACCAAGATTAGCATCGGTTCATACCCAGAATAACT
GCAGCTACGTCGCCGACGGATGCCGCTGCCGCGCCATACTTACTACTCCACTACTACATT
TTACATTTTGGATTCAGGATTGTGTTGCATCTTTTGCAATTGGGTGTATGGATGGAAGGA
AATCGCCATTGATTTAGGTGAGGGTATTGTAGTATCAGGAAGTTGGGGGAGATAAATGAT
AATACTACAGTCATAGACTTCATACAGATGAAATTATTCTGCTTTGTTTGACACATTGAT
TCATTTTCTTTGGAACTCCAGTGAAAGCATTGTTCTTAACTCTTTGCATCAAAGAATTAC
TTGCTTATACTCTTCAAAAAAAAAAAAAAAAAAACAGAG
clustalw multiple alignements is not computed in this case