cluster # 9497

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 9497 cluster # 9497 Sequences # 6 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9497#0 length = 1275 sequences # 6
consensusID : consensus_9497#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1275
fasta sequence
                              [TTTTTTTTTTTTTTTTTTTGAAAGACAATAGGAGTCCTTTGATAGTGCTATGGGAAAAACAAAGGAAAGTTTACAAAGA-GTCACACCTCTTGCTATTTTTCCTATGAAATGTGAAGCATAAGAATACAATTGTATGGAAAGTTTCATTTCTTTCCTATGAATCAAAGGGACATGTAGTAAAAAATCCATAGAAATTTAAATACTATAAAAATTCTTTGTCAATCCTATGAATTAAAGGGGCCCTAGAAGATGAAAGAGATCCTATTCTGACAACCAGTAAGCCAGTAACTGAACTACAAACACAGTGAACCCCCCCCCAAAAAAAAAAGAAAAAGAAAAAAGAAACAGATTGTCATGGACGATGGTCATGCACCCGCGACTATGGCTGGCTTCTTGTTCGTGTAGAGTTCTTCACGAGGAATCTCGTCGCAGCGCAGCTCCTCGTCGTCGTCGCAGTTCCTGCGGCTCAGGCCAAGCGTCATGCTGCTACCCAGAGAGCCGGTGTGGAGCAGAATCAGATACAGCAGCTGCGTCAGCGTCAAGATCGCGATGAACGCCTCCAACGTCCTCAGCCGCCTTCCTCGGTTCCCTAGAGTGATGTGCTTGCACGCGAGGCTGCGAATGGTAAGAACAGAGAAGCACCATATGAGATTACGGATCAAATCTCCAGCCAAGTGTGGTTGGATTGTAGTAGTGTGTAAGGCTGTAAGCTGCCGGAGTGAGCGCGCAGAGAGCGGTTAACCCGAAGGAGAGGGCGGTGAGCGCCCAGGAGACGAGTCCGGTGGACGCCGCCGCAGCCAGGGTCTCGCCGCGCCACGCCCTGACATGGAGCAGCCTGGGGAGCACCGAGCACACGCCGACCACCCCGGCCATCAGCGAGAAGACTAGCAGGTACCCCGACGACGTGTTCCCTCC-AAGATCTGCAGGTAGATGCACAAGCACAGGGCGATCGCGTCAACGCGCGGCGCTCCGGGCGGCCGGGCGGCGCCACCGCCAGGACGCCACCAGATGTCACGATCGATAATACGTGGTGGCTGTTTGGTACGTACGGTGGTGCGTCTCGCCGTCGATGAACTTGTTGAGAGACCACCCGGCGAGGCCCAGGACGGCGGCGTGCATGACGAGGTTGACGCACAGGAGTGGCCCGATGTACCGCCGGCACGCCGTGCCAGCCGCCATCGATCGCTCGATCTCTCGTTCCCTCTCCTCGTCCACGAAGCACACAGCAAACCGACCCGCAGTGGCACGCGCGATGGATAAATCGAGACTGGCCGT]

[-] EMBL AU075971             [TTTTTTTTTTTTTTTTTTTGAAAGACAATAGGAGTCCTTTGATAGTGCTATGGGAAAAACAAAGGAAAGTTTACAAAGAGGTCACACCTCTTGCTATTTTTCCTATGAAATGTGAAGCATAAGAATACAATTGTATGGAAAGTTTCATTTCTTTCCTATGAATCAAAGGGACATGTAGTAAAAAATCCATAGAAATTTAAATACTATAAAAATTCTTTGTCAATCCTATGAATTAAAGGGGCCCTAGAAGATGAAAGAGATCCTATTCTGACAACCAGTAAGCCAGTAACTGAACTACAAACACAGTGAACCCCCCCCCAAAAAAAAAAGAAAAAGAAAAAAGAAACAGATTGTCATGGACGATGGTCATGCACCCGCGACTATGGCTGGCTTCTTGTTCGTGTAGAGTTCTTCACGAGGAATCTCGTCGCAGCGCA NTCCTCGTCGTCGTCGCAGTTCCTGNGGCTCAGGCCAAGCGTCATGCTGCTACCCAGAGAGCCGGTGTGGAGCAGAATCAGATACAGCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CB645872             [                                                             AAGGAAAGTTTACAAAGA GCCTAAAATCTTGCTATTTTTCCTATGAAATGTGAAGCATAAGAATACAATTGTATGGAAAGTTTCATTTCTTTCCTATGAATCAAAGGGACATGTAGTAAAAAATCCATAGAAATTTAAATACTATAAAAATTCTTTGTCAATCCTATGAATTAAAGGGGCCCTAGAAGATGAAAGAGATCCTATTCTGACAACCAGTAAGCCAGTAACTGAACTACAAACACAGTGAACCCCCCCCCAAAAAAAAAAGAAAAAGAAAAAAGAAACAGATTGTCATGGACGATGGTCATGCACCCGCGACTATGGCTGGCTTCTTGTTCGTGTAGAGTTCTTCACGAGGAATCTCGTCGCAGCGCAGCTCCTCGTCGTCGTCGCAGTTCCTGCGGCTCAGGCCAAGCGTCATGCTGCTACCCAGAGAGCCGGTGTGGAGCAGAATCAGATACAGCAGCTGCGTCAGCGTCAAGATCGCGATGAACGCCTCCAACGTCCTCAGCCGCCTTCCTCGGTTCCCTAGAGTGATGTGCTTGCACGCGAGGCTGCGAATGGTAAGAACAGAGAAGCACCATATGAGATTACGGATCAAATCTCCAGCCAAGTGTGGTTGGATTGTAGTAGTGTGTAAGGCTGTAAGCTGCCGGAGTGAGCGCGCAAAGAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CB668354             [                                                                                                                                                             ATGAATCAAAGGGACATGTCTTAAAAAATCCATAGAAATTTAAATACTATAAAAATTCTTTGTCAATCCTATGAATTAAAGGGGCCCTAGAAGATGAAAGAGATCCTATTCTGACAACCAGTAAGCCAGTAACTGAACTACAAACACAGTGAACCCCCCCCCAAAAAAAAAAGAAAAAGAAAAAAGAAACAGATTGTCATGGACGATGGTCATGCACCCGCGACTATGGCTGGCTTCTTGTTCGTGTAGAGTTCTTCACGAGGAATCTCGTCGCAGCGCAGCTCCTCGTCGTCGTCGCAGTTCCTGCGGCTCAGGCCAAGCGTCATGCTGCTACCCAGAGAGCCGGTGTGGAGCAGAATCAGATACAGCAGCTGCGTCAGCGTCAAGATCGCGATGAACGCCTCCAACGTCCTCAGCCGCCTTCCTCGGTTCCCTAGAGTGATGTGCTTGCACGCGAGGCTGCGAATGGTAAGAACAGAGAAGCACCATATGAGATTACGGATCAAATCTCCAGCCAAGTGTGGTTGGATTGTAGTAGTGTGTAAGGCTGTAAGCTGCCGGAGTGAGCGCGCAGAGAGCGGTTAACCCGAAGGAGAGGGCGGTGAGCGCCCAGGAGACGAGTCCGGTGGACGCCGCCGCAGCCAGGGTCTCGCCGCGCCACGCCCTGACATGGAGCAGCCTGGGGAGCACCGAGCACACGCCGACCACCCCGGCCATCAGCGAGAAGACTAGCAGGTACCCCGACGACGTGTTCCCTCC AAGATCTGCAGGTAGATGCACAAGCACAGGGCGATCGCGTCAACGCGCGGCGCTCCGG                                                                                                                                                                                                                                                                                                              ]
[-] EMBL CB668353             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       CTACCCAGAGAGCCGGTGTGGAGCAGAATCAGATACAGCAGCTGCGTCAGCGTCAAGATCGCGATGAACGCCTCCAACGTCCTCAGCCGCCTTCCTCGGTTCCCTAGAGTGATGTGCTTGCACGCGAGGCTGCGAATGGTAAGAACAGAGAAGCACCATATGAGATTACGGATCAAATCTCCAGCCAAGTGTGGTTGGATTGTAGTAGTGTGTAAGGCTGTAAGCTGCCGGAGTGAGCGCGCAGAGAGCGGTTAACCCGAAGGAGAGGGCGGTGAGCGCCCAGGAGACGAGTCCGGTGGACGCCGCCGCAGCCAGGGTCTCGCCGCGCCACGCCCTGACATGGAGCAGCCTGGGGAGCACCGAGCACACGCCGACCACCCCGGCCATCAGCGAGAAGACTAGCAGGTACCCCGACGACGTGTTCCCTCC AAGATCTGCAGGTAGATGCACAAGCACAGGGCGATCGCGTCAACGCGCGGCGCTCCGGGCGGCCGGGCGGCGCCACCGCCAGGACGCCACCAGATGTCACGATCGATAATACGTGGTGGCTGTTTGGTACGTACGGTGGTGCGTCTCGCCGTCGATGAACTTGTTGAGAGACCACCCGGCGAGGCCCAGGACGGCGGCGTGCATGACGAGGTTGACGCACAGGAGTGGCCCGATGTACCGCCGGCACGCCGTGCCAGCCGCCATCGATCGCTCGATCTCTCGTTCCCTCTCCTCGTCCACGAAGCACACAGGAAA                                             ]
[-] EMBL CB645871             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    CGGTGAGCGCCCATGAGACGAGTCCGGCGGACGCCGCAGCAGACAGGGTCTCGCCGCGCCTCTCCGTGACATGGAGCAGCCTGGGGAGCACCGAGCACACGCCGACCACCCCGGCCATCAGCGAGAAGACTAGCAGGTCCCCCGAAGACGTGTTCCCTCC AAGATATGCAGGTAGATGCACAAGCACAGGGCGATCGCGTCAACGCGCGGCGCTCCGGGCGGCCGGGCGGCGCCACCGCCAGGACGCCACCAGATGTCACGATCGATAATACGTGGTGGCTGTTTGGTACGTACGGTGGTGCGTCTCGCCGTCGATGACCTTGTTGAGAGACCACCCGGCGAGGCCCAGGACGGCGGCGTGCATGACGAGGTTGACGCACAGGAGTGGCCCGATGTACCGCCGGCACGCCGTGCCAGCCGCCATCGATCGCTCGATCTCTCGTTCCCTCTCCTCGTCCACGAAGCACACAGCAAACCGACC                                       ]
[-] EMBL OSC100111            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                CTCCAAAGATNTNCAGGTAGATGCANAAGCACAGGNCGATC CGTCAACACNCGACGCTCCGGTCGTCCGGGCGNCGNCACCGCCAGGACGCCACCAGATGTCACGATCGATAATACGTGGTGNCTGTTTGGTACGTACGGTGGTGCGTCTCGCCGTCGATGAACTTGTTGAGAGACCACCCGGCGAGGCCCAGGACGGCGGCGTGCATGACGAGGTTGACGCACAGGAGTGGCCCGATGTACCGCC GCACGCCGTGCCAGCCGCCATCGATCGCTCGATCTCTCGTTCCCTCTCCTCGTCCACGAAGCACACAGCAAACCGACCCGCAGTGGCACGCGCGATGGATAAATCGAGACTGGCCGT]




>consensus_9497#0
TTTTTTTTTTTTTTTTTTTGAAAGACAATAGGAGTCCTTTGATAGTGCTATGGGAAAAAC
AAAGGAAAGTTTACAAAGAGTCACACCTCTTGCTATTTTTCCTATGAAATGTGAAGCATA
AGAATACAATTGTATGGAAAGTTTCATTTCTTTCCTATGAATCAAAGGGACATGTAGTAA
AAAATCCATAGAAATTTAAATACTATAAAAATTCTTTGTCAATCCTATGAATTAAAGGGG
CCCTAGAAGATGAAAGAGATCCTATTCTGACAACCAGTAAGCCAGTAACTGAACTACAAA
CACAGTGAACCCCCCCCCAAAAAAAAAAGAAAAAGAAAAAAGAAACAGATTGTCATGGAC
GATGGTCATGCACCCGCGACTATGGCTGGCTTCTTGTTCGTGTAGAGTTCTTCACGAGGA
ATCTCGTCGCAGCGCAGCTCCTCGTCGTCGTCGCAGTTCCTGCGGCTCAGGCCAAGCGTC
ATGCTGCTACCCAGAGAGCCGGTGTGGAGCAGAATCAGATACAGCAGCTGCGTCAGCGTC
AAGATCGCGATGAACGCCTCCAACGTCCTCAGCCGCCTTCCTCGGTTCCCTAGAGTGATG
TGCTTGCACGCGAGGCTGCGAATGGTAAGAACAGAGAAGCACCATATGAGATTACGGATC
AAATCTCCAGCCAAGTGTGGTTGGATTGTAGTAGTGTGTAAGGCTGTAAGCTGCCGGAGT
GAGCGCGCAGAGAGCGGTTAACCCGAAGGAGAGGGCGGTGAGCGCCCAGGAGACGAGTCC
GGTGGACGCCGCCGCAGCCAGGGTCTCGCCGCGCCACGCCCTGACATGGAGCAGCCTGGG
GAGCACCGAGCACACGCCGACCACCCCGGCCATCAGCGAGAAGACTAGCAGGTACCCCGA
CGACGTGTTCCCTCCAAGATCTGCAGGTAGATGCACAAGCACAGGGCGATCGCGTCAACG
CGCGGCGCTCCGGGCGGCCGGGCGGCGCCACCGCCAGGACGCCACCAGATGTCACGATCG
ATAATACGTGGTGGCTGTTTGGTACGTACGGTGGTGCGTCTCGCCGTCGATGAACTTGTT
GAGAGACCACCCGGCGAGGCCCAGGACGGCGGCGTGCATGACGAGGTTGACGCACAGGAG
TGGCCCGATGTACCGCCGGCACGCCGTGCCAGCCGCCATCGATCGCTCGATCTCTCGTTC
CCTCTCCTCGTCCACGAAGCACACAGCAAACCGACCCGCAGTGGCACGCGCGATGGATAA
ATCGAGACTGGCCGT
clustalw multiple alignements is not computed in this case