These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9497#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1275 fasta sequence [TTTTTTTTTTTTTTTTTTTGAAAGACAATAGGAGTCCTTTGATAGTGCTATGGGAAAAACAAAGGAAAGTTTACAAAGA-GTCACACCTCTTGCTATTTTTCCTATGAAATGTGAAGCATAAGAATACAATTGTATGGAAAGTTTCATTTCTTTCCTATGAATCAAAGGGACATGTAGTAAAAAATCCATAGAAATTTAAATACTATAAAAATTCTTTGTCAATCCTATGAATTAAAGGGGCCCTAGAAGATGAAAGAGATCCTATTCTGACAACCAGTAAGCCAGTAACTGAACTACAAACACAGTGAACCCCCCCCCAAAAAAAAAAGAAAAAGAAAAAAGAAACAGATTGTCATGGACGATGGTCATGCACCCGCGACTATGGCTGGCTTCTTGTTCGTGTAGAGTTCTTCACGAGGAATCTCGTCGCAGCGCAGCTCCTCGTCGTCGTCGCAGTTCCTGCGGCTCAGGCCAAGCGTCATGCTGCTACCCAGAGAGCCGGTGTGGAGCAGAATCAGATACAGCAGCTGCGTCAGCGTCAAGATCGCGATGAACGCCTCCAACGTCCTCAGCCGCCTTCCTCGGTTCCCTAGAGTGATGTGCTTGCACGCGAGGCTGCGAATGGTAAGAACAGAGAAGCACCATATGAGATTACGGATCAAATCTCCAGCCAAGTGTGGTTGGATTGTAGTAGTGTGTAAGGCTGTAAGCTGCCGGAGTGAGCGCGCAGAGAGCGGTTAACCCGAAGGAGAGGGCGGTGAGCGCCCAGGAGACGAGTCCGGTGGACGCCGCCGCAGCCAGGGTCTCGCCGCGCCACGCCCTGACATGGAGCAGCCTGGGGAGCACCGAGCACACGCCGACCACCCCGGCCATCAGCGAGAAGACTAGCAGGTACCCCGACGACGTGTTCCCTCC-AAGATCTGCAGGTAGATGCACAAGCACAGGGCGATCGCGTCAACGCGCGGCGCTCCGGGCGGCCGGGCGGCGCCACCGCCAGGACGCCACCAGATGTCACGATCGATAATACGTGGTGGCTGTTTGGTACGTACGGTGGTGCGTCTCGCCGTCGATGAACTTGTTGAGAGACCACCCGGCGAGGCCCAGGACGGCGGCGTGCATGACGAGGTTGACGCACAGGAGTGGCCCGATGTACCGCCGGCACGCCGTGCCAGCCGCCATCGATCGCTCGATCTCTCGTTCCCTCTCCTCGTCCACGAAGCACACAGCAAACCGACCCGCAGTGGCACGCGCGATGGATAAATCGAGACTGGCCGT] [-] EMBL AU075971 [TTTTTTTTTTTTTTTTTTTGAAAGACAATAGGAGTCCTTTGATAGTGCTATGGGAAAAACAAAGGAAAGTTTACAAAGAGGTCACACCTCTTGCTATTTTTCCTATGAAATGTGAAGCATAAGAATACAATTGTATGGAAAGTTTCATTTCTTTCCTATGAATCAAAGGGACATGTAGTAAAAAATCCATAGAAATTTAAATACTATAAAAATTCTTTGTCAATCCTATGAATTAAAGGGGCCCTAGAAGATGAAAGAGATCCTATTCTGACAACCAGTAAGCCAGTAACTGAACTACAAACACAGTGAACCCCCCCCCAAAAAAAAAAGAAAAAGAAAAAAGAAACAGATTGTCATGGACGATGGTCATGCACCCGCGACTATGGCTGGCTTCTTGTTCGTGTAGAGTTCTTCACGAGGAATCTCGTCGCAGCGCA NTCCTCGTCGTCGTCGCAGTTCCTGNGGCTCAGGCCAAGCGTCATGCTGCTACCCAGAGAGCCGGTGTGGAGCAGAATCAGATACAGCA ] [+] EMBL CB645872 [ AAGGAAAGTTTACAAAGA GCCTAAAATCTTGCTATTTTTCCTATGAAATGTGAAGCATAAGAATACAATTGTATGGAAAGTTTCATTTCTTTCCTATGAATCAAAGGGACATGTAGTAAAAAATCCATAGAAATTTAAATACTATAAAAATTCTTTGTCAATCCTATGAATTAAAGGGGCCCTAGAAGATGAAAGAGATCCTATTCTGACAACCAGTAAGCCAGTAACTGAACTACAAACACAGTGAACCCCCCCCCAAAAAAAAAAGAAAAAGAAAAAAGAAACAGATTGTCATGGACGATGGTCATGCACCCGCGACTATGGCTGGCTTCTTGTTCGTGTAGAGTTCTTCACGAGGAATCTCGTCGCAGCGCAGCTCCTCGTCGTCGTCGCAGTTCCTGCGGCTCAGGCCAAGCGTCATGCTGCTACCCAGAGAGCCGGTGTGGAGCAGAATCAGATACAGCAGCTGCGTCAGCGTCAAGATCGCGATGAACGCCTCCAACGTCCTCAGCCGCCTTCCTCGGTTCCCTAGAGTGATGTGCTTGCACGCGAGGCTGCGAATGGTAAGAACAGAGAAGCACCATATGAGATTACGGATCAAATCTCCAGCCAAGTGTGGTTGGATTGTAGTAGTGTGTAAGGCTGTAAGCTGCCGGAGTGAGCGCGCAAAGAG ] [+] EMBL CB668354 [ ATGAATCAAAGGGACATGTCTTAAAAAATCCATAGAAATTTAAATACTATAAAAATTCTTTGTCAATCCTATGAATTAAAGGGGCCCTAGAAGATGAAAGAGATCCTATTCTGACAACCAGTAAGCCAGTAACTGAACTACAAACACAGTGAACCCCCCCCCAAAAAAAAAAGAAAAAGAAAAAAGAAACAGATTGTCATGGACGATGGTCATGCACCCGCGACTATGGCTGGCTTCTTGTTCGTGTAGAGTTCTTCACGAGGAATCTCGTCGCAGCGCAGCTCCTCGTCGTCGTCGCAGTTCCTGCGGCTCAGGCCAAGCGTCATGCTGCTACCCAGAGAGCCGGTGTGGAGCAGAATCAGATACAGCAGCTGCGTCAGCGTCAAGATCGCGATGAACGCCTCCAACGTCCTCAGCCGCCTTCCTCGGTTCCCTAGAGTGATGTGCTTGCACGCGAGGCTGCGAATGGTAAGAACAGAGAAGCACCATATGAGATTACGGATCAAATCTCCAGCCAAGTGTGGTTGGATTGTAGTAGTGTGTAAGGCTGTAAGCTGCCGGAGTGAGCGCGCAGAGAGCGGTTAACCCGAAGGAGAGGGCGGTGAGCGCCCAGGAGACGAGTCCGGTGGACGCCGCCGCAGCCAGGGTCTCGCCGCGCCACGCCCTGACATGGAGCAGCCTGGGGAGCACCGAGCACACGCCGACCACCCCGGCCATCAGCGAGAAGACTAGCAGGTACCCCGACGACGTGTTCCCTCC AAGATCTGCAGGTAGATGCACAAGCACAGGGCGATCGCGTCAACGCGCGGCGCTCCGG ] [-] EMBL CB668353 [ CTACCCAGAGAGCCGGTGTGGAGCAGAATCAGATACAGCAGCTGCGTCAGCGTCAAGATCGCGATGAACGCCTCCAACGTCCTCAGCCGCCTTCCTCGGTTCCCTAGAGTGATGTGCTTGCACGCGAGGCTGCGAATGGTAAGAACAGAGAAGCACCATATGAGATTACGGATCAAATCTCCAGCCAAGTGTGGTTGGATTGTAGTAGTGTGTAAGGCTGTAAGCTGCCGGAGTGAGCGCGCAGAGAGCGGTTAACCCGAAGGAGAGGGCGGTGAGCGCCCAGGAGACGAGTCCGGTGGACGCCGCCGCAGCCAGGGTCTCGCCGCGCCACGCCCTGACATGGAGCAGCCTGGGGAGCACCGAGCACACGCCGACCACCCCGGCCATCAGCGAGAAGACTAGCAGGTACCCCGACGACGTGTTCCCTCC AAGATCTGCAGGTAGATGCACAAGCACAGGGCGATCGCGTCAACGCGCGGCGCTCCGGGCGGCCGGGCGGCGCCACCGCCAGGACGCCACCAGATGTCACGATCGATAATACGTGGTGGCTGTTTGGTACGTACGGTGGTGCGTCTCGCCGTCGATGAACTTGTTGAGAGACCACCCGGCGAGGCCCAGGACGGCGGCGTGCATGACGAGGTTGACGCACAGGAGTGGCCCGATGTACCGCCGGCACGCCGTGCCAGCCGCCATCGATCGCTCGATCTCTCGTTCCCTCTCCTCGTCCACGAAGCACACAGGAAA ] [-] EMBL CB645871 [ CGGTGAGCGCCCATGAGACGAGTCCGGCGGACGCCGCAGCAGACAGGGTCTCGCCGCGCCTCTCCGTGACATGGAGCAGCCTGGGGAGCACCGAGCACACGCCGACCACCCCGGCCATCAGCGAGAAGACTAGCAGGTCCCCCGAAGACGTGTTCCCTCC AAGATATGCAGGTAGATGCACAAGCACAGGGCGATCGCGTCAACGCGCGGCGCTCCGGGCGGCCGGGCGGCGCCACCGCCAGGACGCCACCAGATGTCACGATCGATAATACGTGGTGGCTGTTTGGTACGTACGGTGGTGCGTCTCGCCGTCGATGACCTTGTTGAGAGACCACCCGGCGAGGCCCAGGACGGCGGCGTGCATGACGAGGTTGACGCACAGGAGTGGCCCGATGTACCGCCGGCACGCCGTGCCAGCCGCCATCGATCGCTCGATCTCTCGTTCCCTCTCCTCGTCCACGAAGCACACAGCAAACCGACC ] [-] EMBL OSC100111 [ CTCCAAAGATNTNCAGGTAGATGCANAAGCACAGGNCGATC CGTCAACACNCGACGCTCCGGTCGTCCGGGCGNCGNCACCGCCAGGACGCCACCAGATGTCACGATCGATAATACGTGGTGNCTGTTTGGTACGTACGGTGGTGCGTCTCGCCGTCGATGAACTTGTTGAGAGACCACCCGGCGAGGCCCAGGACGGCGGCGTGCATGACGAGGTTGACGCACAGGAGTGGCCCGATGTACCGCC GCACGCCGTGCCAGCCGCCATCGATCGCTCGATCTCTCGTTCCCTCTCCTCGTCCACGAAGCACACAGCAAACCGACCCGCAGTGGCACGCGCGATGGATAAATCGAGACTGGCCGT] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||