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Oryza sativa
cluster # 9519 cluster # 9519       Sequences # 6       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9519#0 length = 2591 sequences # 4  
consensus_9519#1 length = 705 sequences # 2  

consensusID : consensus_9519#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 2591
fasta sequence
                              [CTCCTCCCTTCTCTCCTACCGAGTCCAGTGTCGAATAGCTAGAGGCGCCGGCCGCCATTGCTGGCCCCTGCACGCGCCGCCCCCCCTGCGCCACGGCCGTCGCCGCCGGCGGGAAGTGTAGCTCGCCGCCGCCACTCTGCGCGCACCCCCTTCGCCTTGCTCCGCCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGACCTCGACTCCGGCCAGTGCAGCAATGGCGCTGGGAATGGGAACCCGATACAGCGCACCAGCAGCTGCGGCAGCATCCCATCTGGCCGCTCCACTTCCACCATCAAGCGCATGTCATCCGCCATCTTCCCGTCCAGCGTCGTGGCTGGTATTGAGCCACTTGTCTCGTTCAAGGATGTCCCCAACTCGGAGAAGCAGAATCTGTTCGTCAGCAAGCTGAATCTGTGCTGTGCTGTCTTTGACTTCTCGGATCCGAACAAGAGCTCGGCGGAGAAGGATATCAAGAGGCAGACGTTGTTGGATCTCATAGATTACGTGGATTCCAGCAGTTCCCGTTTCTCCGAGGCGGTGATTGCTGCTAGCTCTAGGATGTTTGCTGTCAACTTGTTCCGGGTGTTTCCTCCAAATTACAGGTCCAGTTCATCTGGCGGCGGCGAGGGTGAAGAGGAGGAGCCAATGTTTGAGCCTGCATGGTGCCATCTGCAGCTTGTTTATGAGCTGCTACTGAAATTTATTGGATCCTCGTCCCTCGATGCAAAGGTAGGGAAAAAGTACTTTGATCACTCCTTCATTGTGAAACTGCT-GAATCTTCTT-GATT-CA-GAGGATCCAAGGGAAAGGGATTGTTT-GAAAACTAT-TCTGCACAGGATTTATGGGAAGTTCATGGTTCACCGTCCTTTTA-TCCGGAAAGCAGTAAGCAATATATT-CTACCACTTTGTGTTTGAGACTGACCGGCATAACGGAATTGCTGAGCTGCTGGAGGTATTTGGCAGTGTTATTAGTGGCTTT-GCGTTGCCTCTGAAGGAAGAACACAAAATCTTTCTTTGGAGAGTTTTGGTTCCTTTACACAAACCAAAATCAGTTGGTGTGTATCTCCAGCAGTTGACATATTGTGTGACACAGTTCATAGAAAAGGATCCCAAGCTTGCTAGCTCAGTAATTATTGGTTTGCTAAGATATTGGCCAATAACAAATAGTCAGAAGGAGGTGATGTTTCTGAGTGAGATTGAAGAGATCTTGGAGACAATCAGCACGGCGGAATTCCAGAAATGTATGGTACCTTTGTTTAGGCGGATTGCTCAATGCATCAAGAGCTCTCACTTCAGGTAACTTGCCCAAATAAATATAACCTATCGATGTTTATTTTCTGTTTTTGCCACTATGCATTTCCCTCACCTAAGAAAAATAATATATAGGTGGTAAAAATAATATATCGGAGTACTACATATGAAAGTAGTTGTGGCCCTGTTTGATTGATCAATTGCCACGCTGATGAATTACTATACTAGTCGCTAACTCTACCGCTTCACCTAGACATTTTATTATATAGGTGGTAAAATTTTATGTAAACATCACTCAGTTGAAATGGATCATGATCGTAAAGCTCACATGGTATATAGGGTTTTTTTGGTTGCATCATTTATGTAAGGTATGAAAGCATTACCTGTTGACTTGCCAAATGGATGAGATAATAGATGTCTGATGGTCCGAAATAAATGTGGACAACAATAGTGGGCCATTATGTTATCAACTAATCATGCTTTGGGCATGGGGTTGCTCTGTACTGTTAATATCACAAATGTGAGATATTTGGACCAGCATTAAGAATTGAAGACATTTGTCTGCCATGACAGACTAATGCTTTTTATCCAAGTAATTGCCTCAACGAGATGGGTTTTTTCAGGTTGCTGAACGGGCGCTTTTCATATGGAACAACGATAACGTTATTAGCTTGATTGCACAAAACCGCCAAATGATCATGCCTATCATTGTTCCAGCATTGGAACATAATAGCCAGAATCATTGGAACCAAGCTGTCCTGAATCTCACAGATAATGTAAAGAAGATGTTTTCTGAGATGGATGACGTGCTCTTTTCGGCGTGCCTGGTCAAGTACAAGGAGGACGAAGAAAGGCAAGCTTCACTGGAATCAAAGAGGAGGTTAACATGGGAGAAGCTAGAATCAGCTGCTTCTTTCCAGCCAGTGACGGGCCATACAGCCGTCCTGGTAGGCCGCCAACCCTCAGCAAATTTGATTGCCACCCTTA-TTAGCATGTGTTCAGTGGAGGTGAAAAATTAGCATGTGTTCAGTGAAGGTGAAAATGGGGTTCTTCACTTTCTGGTGATGCTCACCAACTGAACGACTTCAGACTTCACTATTTTCCCCTTATTTCTTTTTTAT-GTCTGTATTAGTAAGCAGTGCTGTAAGTTGTAACTATTTTCGTATGTTTATGCTCTGAAGGCAAAGCATGTATCGAGTGCTTAAACTCCTTACCTGTATCTTTGCCTGTTTATTTATGAGCAATTTCCTACGCCTAAACTCACTCTTCTTCTGGTCATGGTTGCTCAAGCAACTTCTAATACGTTGATTCAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AK069462             [CTCCTCCCTTCTCTCCTACCGAGTCCAGTGTCGAATAGCTAGAGGCGCCGGCCGCCATTGCTGGCCCCTGCACGCGCCGCCCCCCCTGCGCCACGGCCGTCGCCGCCGGCGGGAAGTGTAGCTCGCCGCCGCCACTCTGCGCGCACCCCCTTCGCCTTGCTCCGCCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGACCTCGACTCCGGCCAGTGCAGCAATGGCGCTGGGAATGGGAACCCGATACAGCGCACCAGCAGCTGCGGCAGCATCCCATCTGGCCGCTCCACTTCCACCATCAAGCGCATGTCATCCGCCATCTTCCCGTCCAGCGTCGTGGCTGGTATTGAGCCACTTGTCTCGTTCAAGGATGTCCCCAACTCGGAGAAGCAGAATCTGTTCGTCAGCAAGCTGAATCTGTGCTGTGCTGTCTTTGACTTCTCGGATCCGAACAAGAGCTCGGCGGAGAAGGATATCAAGAGGCAGACGTTGTTGGATCTCATAGATTACGTGGATTCCAGCAGTTCCCGTTTCTCCGAGGCGGTGATTGCTGCTAGCTCTAGGATGTTTGCTGTCAACTTGTTCCGGGTGTTTCCTCCAAATTACAGGTCCAGTTCATCTGGCGGCGGCGAGGGTGAAGAGGAGGAGCCAATGTTTGAGCCTGCATGGTGCCATCTGCAGCTTGTTTATGAGCTGCTACTGAAATTTATTGGATCCTCGTCCCTCGATGCAAAGGTAGGGAAAAAGTACTTTGATCACTCCTTCATTGTGAAACTGCT GAATCTTCTT GATT CA GAGGATCCAAGGGAAAGGGATTGTTT GAAAACTAT TCTGCACAGGATTTATGGGAAGTTCATGGTTCACCGTCCTTTTA TCCGGAAAGCAGTAAGCAATATATT CTACCACTTTGTGTTTGAGACTGACCGGCATAACGGAATTGCTGAGCTGCTGGAGGTATTTGGCAGTGTTATTAGTGGCTTT GCGTTGCCTCTGAAGGAAGAACACAAAATCTTTCTTTGGAGAGTTTTGGTTCCTTTACACAAACCAAAATCAGTTGGTGTGTATCTCCAGCAGTTGACATATTGTGTGACACAGTTCATAGAAAAGGATCCCAAGCTTGCTAGCTCAGTAATTATTGGTTTGCTAAGATATTGGCCAATAACAAATAGTCAGAAGGAGGTGATGTTTCTGAGTGAGATTGAAGAGATCTTGGAGACAATCAGCACGGCGGAATTCCAGAAATGTATGGTACCTTTGTTTAGGCGGATTGCTCAATGCATCAAGAGCTCTCACTTCAGGTAACTTGCCCAAATAAATATAACCTATCGATGTTTATTTTCTGTTTTTGCCACTATGCATTTCCCTCACCTAAGAAAAATAATATATAGGTGGTAAAAATAATATATCGGAGTACTACATATGAAAGTAGTTGTGGCCCTGTTTGATTGATCAATTGCCACGCTGATGAATTACTATACTAGTCGCTAACTCTACCGCTTCACCTAGACATTTTATTATATAGGTGGTAAAATTTTATGTAAACATCACTCAGTTGAAATGGATCATGATCGTAAAGCTCACATGGTATATAGGGTTTTTTTGGTTGCATCATTTATGTAAGGTATGAAAGCATTACCTGTTGACTTGCCAAATGGATGAGATAATAGATGTCTGATGGTCCGAAATAAATGTGGACAACAATAGTGGGCCATTATGTTATCAACTAATCATGCTTTGGGCATGGGGTTGCTCTGTACTGTTAATATCACAAATGTGAGATATTTGGACCAGCATTAAGAATTGAAGACATTTGTCTGCCATGACAGACTAATGCTTTTTATCCAAGTAATTGCCTCAACGAGATGGGTTTTTTCAGGTTGCTGAACGGGCGCTTTTCATATGGAACAACGATAACGTTATTAGCTTGATTGCACAAAACCGCCAAATGATCATGCCTATCATTGTTCCAGCATTGGAACATAATAGCCAGAATCATTGGAACCAAGCTGTCCTGAATCTCACAGATAATGTAAAGAAGATGTTTTCTGAGATGGATGACGTGCTCTTTTCGGCGTGCCTGGTCAAGTACAAGGAGGACGAAGAAAGGCAAGCTTCACTGGAATCAAAGAGGAGGTTAACATGGGAGAAGCTAGAATCAGCTGCTTCTTTCCAGCCAGTGACGGGCCATACAGCCGTCCTGGTAGGCCGCCAACCCTCAGCAAATTTGATTGCCACCCTTA TTAGCATGTGTTCAGTGGAGGTGAAAAATTAGCATGTGTTCAGTGAAGGTGAAAATGGGGTTCTTCACTTTCTGGTGATGCTCACCAACTGAACGACTTCAGACTTCACTATTTTCCCCTTATTTCTTTTTTAT GTCTGTATTAGTAAGCAGTGCTGTAAGTTGTAACTATTTTCGTATGTTTATGCTCTGAAGGCAAAGCATGTATCGAGTGCTTAAACTCCTTACCTGTATCTTTGCCTGTTTATTTATGAGCAATT                                                                                             ]
[+] EMBL AU225301             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           gccgctGGGAAAAAGTACTTTGATCACTCCTTCATTGTGAAACTGCTGGAATCTTCTTAGATTGCATGAGGATCCAAGGGAAAGGGATTGTTTAGAAAACTATATCTGCACAGGATTTATGGGAAGTTCATGGTTCACCGTCCTTTTATTCCGGAAAGCAGTAAGCAATATATTACTACCACTTTGTGTTTGAGACTGACCGGCATAACGGAATTGCTGAGCTGCTGGAGGTATTTGGCAGTGTTATTAGTGGCTTTAGCGTTGCCTCTGAAGGAAGAACACAAAATCTTTCTTTGGAGAGTTTTGGTTCCTTTACACAAACCAAAATCAGTTGGTGTGTATCTCCAGCAGTTGACATATTGTGTGACACA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL C27982               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     GAATCTCACAGATAATGTAAAGAAGATGTTTTCTGAGATGGATGACGTGCTCTTTTCGGCGTGCCTGGTCAAGTACAAGGAGGACGAAGAAAGGCAAGCTTCACTGGAATCAAAGAGGAGGTTAACATGGGAGAAGCTAGAATCAGCTGCTTCTTTCCAGCCAGTGACGGGCCATACAGCCGTCCTGGTAGGCCGCCAACCCTCAGCAAATTTNATTGCCACCCTTATTTAGCATGTGTTCAGTGGAGGTGAAAAATTAGCATGTGTTCAGTGAAGGTGAAAATGGGGTTCTTCACTTTCTGGTGATGCTCACCAACTGAACGACTTCAGACTTCACTATTTTCCCCTTATTTCTTTTTTATGGCCTG ATTAG                                                                                                                                                                                                               ]
[+] EMBL AU085794             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ATGGGGTTCTTCNCTTTCCGGTGNTGCTCNCCAACTGAACGACTTCAGACTTCACTATTTTCCCCTTATTTCTTTTTTAT GTCTGTATTAGTAAGCAGTGCTGTAAGTTGTAACTATTTTCGTATGTTTATGCTCTGAAGGCAAAGCATGTATCGAGTGCTTAAACTCCTTACCTGTATCTTTGCCTGTTTATTTATGAGCAATTTCCTACGCCTAAACTCACTCTTCTTCTGGTCATGGTTGCTCAAGCAACTTCTAATACGTTGATTCAAAAAAAAAAAAAAAAAAAAAAAAAAAA]


>consensus_9519#0 CTCCTCCCTTCTCTCCTACCGAGTCCAGTGTCGAATAGCTAGAGGCGCCGGCCGCCATTG CTGGCCCCTGCACGCGCCGCCCCCCCTGCGCCACGGCCGTCGCCGCCGGCGGGAAGTGTA GCTCGCCGCCGCCACTCTGCGCGCACCCCCTTCGCCTTGCTCCGCCCGCCGCCGCCGCCG CCGCCGCCGCCGCCGACCTCGACTCCGGCCAGTGCAGCAATGGCGCTGGGAATGGGAACC CGATACAGCGCACCAGCAGCTGCGGCAGCATCCCATCTGGCCGCTCCACTTCCACCATCA AGCGCATGTCATCCGCCATCTTCCCGTCCAGCGTCGTGGCTGGTATTGAGCCACTTGTCT CGTTCAAGGATGTCCCCAACTCGGAGAAGCAGAATCTGTTCGTCAGCAAGCTGAATCTGT GCTGTGCTGTCTTTGACTTCTCGGATCCGAACAAGAGCTCGGCGGAGAAGGATATCAAGA GGCAGACGTTGTTGGATCTCATAGATTACGTGGATTCCAGCAGTTCCCGTTTCTCCGAGG CGGTGATTGCTGCTAGCTCTAGGATGTTTGCTGTCAACTTGTTCCGGGTGTTTCCTCCAA ATTACAGGTCCAGTTCATCTGGCGGCGGCGAGGGTGAAGAGGAGGAGCCAATGTTTGAGC CTGCATGGTGCCATCTGCAGCTTGTTTATGAGCTGCTACTGAAATTTATTGGATCCTCGT CCCTCGATGCAAAGGTAGGGAAAAAGTACTTTGATCACTCCTTCATTGTGAAACTGCTGA ATCTTCTTGATTCAGAGGATCCAAGGGAAAGGGATTGTTTGAAAACTATTCTGCACAGGA TTTATGGGAAGTTCATGGTTCACCGTCCTTTTATCCGGAAAGCAGTAAGCAATATATTCT ACCACTTTGTGTTTGAGACTGACCGGCATAACGGAATTGCTGAGCTGCTGGAGGTATTTG GCAGTGTTATTAGTGGCTTTGCGTTGCCTCTGAAGGAAGAACACAAAATCTTTCTTTGGA GAGTTTTGGTTCCTTTACACAAACCAAAATCAGTTGGTGTGTATCTCCAGCAGTTGACAT ATTGTGTGACACAGTTCATAGAAAAGGATCCCAAGCTTGCTAGCTCAGTAATTATTGGTT TGCTAAGATATTGGCCAATAACAAATAGTCAGAAGGAGGTGATGTTTCTGAGTGAGATTG AAGAGATCTTGGAGACAATCAGCACGGCGGAATTCCAGAAATGTATGGTACCTTTGTTTA GGCGGATTGCTCAATGCATCAAGAGCTCTCACTTCAGGTAACTTGCCCAAATAAATATAA CCTATCGATGTTTATTTTCTGTTTTTGCCACTATGCATTTCCCTCACCTAAGAAAAATAA TATATAGGTGGTAAAAATAATATATCGGAGTACTACATATGAAAGTAGTTGTGGCCCTGT TTGATTGATCAATTGCCACGCTGATGAATTACTATACTAGTCGCTAACTCTACCGCTTCA CCTAGACATTTTATTATATAGGTGGTAAAATTTTATGTAAACATCACTCAGTTGAAATGG ATCATGATCGTAAAGCTCACATGGTATATAGGGTTTTTTTGGTTGCATCATTTATGTAAG GTATGAAAGCATTACCTGTTGACTTGCCAAATGGATGAGATAATAGATGTCTGATGGTCC GAAATAAATGTGGACAACAATAGTGGGCCATTATGTTATCAACTAATCATGCTTTGGGCA TGGGGTTGCTCTGTACTGTTAATATCACAAATGTGAGATATTTGGACCAGCATTAAGAAT TGAAGACATTTGTCTGCCATGACAGACTAATGCTTTTTATCCAAGTAATTGCCTCAACGA GATGGGTTTTTTCAGGTTGCTGAACGGGCGCTTTTCATATGGAACAACGATAACGTTATT AGCTTGATTGCACAAAACCGCCAAATGATCATGCCTATCATTGTTCCAGCATTGGAACAT AATAGCCAGAATCATTGGAACCAAGCTGTCCTGAATCTCACAGATAATGTAAAGAAGATG TTTTCTGAGATGGATGACGTGCTCTTTTCGGCGTGCCTGGTCAAGTACAAGGAGGACGAA GAAAGGCAAGCTTCACTGGAATCAAAGAGGAGGTTAACATGGGAGAAGCTAGAATCAGCT GCTTCTTTCCAGCCAGTGACGGGCCATACAGCCGTCCTGGTAGGCCGCCAACCCTCAGCA AATTTGATTGCCACCCTTATTAGCATGTGTTCAGTGGAGGTGAAAAATTAGCATGTGTTC AGTGAAGGTGAAAATGGGGTTCTTCACTTTCTGGTGATGCTCACCAACTGAACGACTTCA GACTTCACTATTTTCCCCTTATTTCTTTTTTATGTCTGTATTAGTAAGCAGTGCTGTAAG TTGTAACTATTTTCGTATGTTTATGCTCTGAAGGCAAAGCATGTATCGAGTGCTTAAACT CCTTACCTGTATCTTTGCCTGTTTATTTATGAGCAATTTCCTACGCCTAAACTCACTCTT CTTCTGGTCATGGTTGCTCAAGCAACTTCTAATACGTTGATTCAAAAAAAAAAAAAAAAA AAAAAAAAAAA



consensusID : consensus_9519#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 705
fasta sequence
                              [TGGGAGACAATCAGCACGGCGGAATTCCAGAAATGTATGGTACCTTTGTTTAGGCGGATTGCTCAATGCATCAAGAGCTCTCACTTCCAGGTTGCTGAACGGGCGCTTTTCATATGGAACAACGATAACGTTATTAGCTTAGATTGCACAAAACCGCCAAATGATCATGCCTATCATTGTTCCAGCATTGGAACATAATAGCCAGAATCATTGGAACCAAGCTGTGCTGAATCTCACAGATAATGTAAAGAAGATGTTTTCTGAGATGGATGACGTGCTCTTTTCGGCGTGCCTGGTCAAGTACAAGGAGGACGAAGAAACGCAAGCTTCACTGGAATCAAAGAGGAGGTTAACATGGGAGAAGCTAGAATCAGCTGCTTCTTTCCAGCCAGTGACGGGCCATACAGCCGTCCTGGTAGGCCGCCAACCCTCAGCAAATTTGATTGCCACCCTTATTTAGCATGTGTTCAGTGGAGGTGAAAAATTAGCATGTGTTCAGTGAAGGTGAAAATGGGGTTCTTCACTTTCTGG-GGATGCTCACCAACTGAACGACTTCAGACTTCACTATTTTTCCCTTATTTCTTTTTTATGTCTGGATTAA-TAA--GCAGTGCT-GTAA-GTTGTAA-CTAATTTTC-TATG-TTTAT-GCTCT-GAA-GGCAAAGCAT-GTAT-CGA-AGTGCTTAAACTCCTTACCTGGTAAAAAAAAAAAAAAAA]

[+] EMBL BE040415             [TGGGAGACAATCAGCACGGCGGAATTCCAGAAATGTATGGTACCTTTGTTTAGGCGGATTGCTCAATGCATCAAGAGCTCTCACTTCCAGGTTGCTGAACGGGCGCTTTTCATATGGAACAACGATAACGTTATTAGCTTAGATTGCACAAAACCGCCAAATGATCATGCCTATCATTGTTCCAGCATTGGAACATAATAGCCAGAATCATTGGAACCAAGCTGTGCTGAATCTCACAGATAATGTAAAGAAGATGTTTTCTGAGATGGATGACGTGCTCTTTTCGGCGTGCCTGGTCAAGTACAAGGAGGACGAAGAAACGCAAGCTTCACTGGAATCAAAGAGGAGGTTAACATGGGAGAAGCTAGAATCAGCTGCTTCTTTCCAGCCAGTGACGGGCCATACAGCCGTCCTGGTAGGCCGCCAACCCTCAGCAAATTTGATTGCCACCCTTATTTAGCATGTGTTCAGTGGAGGTGAAAAATTAGCATGTGTTCAGTGAAGGTGAAAATGGGGTTCTTCACTTTCTGG GGATGCTCACCAACTGAACGACTTCAGACTTCACTATTTTTCCCTTATTTCTTTTTTATGTCTGGATTAA TAA  GCAGTGCT GTAA GTTGTAA CTAATTTTC TATG TTTAT GCTCT GAA GGCAAAGCAT GTAT CGA AGTGCTTAAACTCCTTACCTGGTAAAAAAAAAAAAAAAA]
[+] EMBL OSA272423            [                                    ATGGTACCTTTGTTTAGGCGGATTGCTCAATGCATCAAGAGCTCTCACTTCCAGGTTGCTGAACGGGCGCTTTTCATATGGAACAACGATAACGTTATTAGCTT GATTGCACAAAACCGCCAAATGATCATGCCTATCATTGTTCCAGCATTGGAACATAATAGCCAGAATCATTGGAACCAAGCTGTCCTGAATCTCACAGATAATGTAAAGAAGATGTTTTCTGAGATGGATGACGTGCTCTTTTCGGCGTGCCTGGTCAAGTACAAGGAGGACGAAGAAAGGCAAGCTTCACTGGAATCAAAGAGGAGGTTAACATGGGAGAAGCTAGAATCAGCTGCTTCTTTCCAGCCAGTGACGGGCCATACAGCCGTCCTGGTAGGCTGCCAACCCTCAGCAAATTTGATTGCCACCCTTATTTAGCATGTGTTCAGTGGAGGTGAAAAATTAGCATGTGTTCAGTGAAGGTGAAAATGGGGTTCTTCACTTTCTGGTGGATGCTCACCAACTGAACGACTTCAGACTTCACTATTTTTCCCTTATTTCTTTTTTATGTCTGTATTAAGTAAAGGCAGTGCTGGTAAGGTTGTAACCTATTTTTCGTATGTTTTATGGCTCTGGAANGGCAAAGCATGGTATCCGAGGGTGCTTTAAa                            ]


>consensus_9519#1 TGGGAGACAATCAGCACGGCGGAATTCCAGAAATGTATGGTACCTTTGTTTAGGCGGATT GCTCAATGCATCAAGAGCTCTCACTTCCAGGTTGCTGAACGGGCGCTTTTCATATGGAAC AACGATAACGTTATTAGCTTAGATTGCACAAAACCGCCAAATGATCATGCCTATCATTGT TCCAGCATTGGAACATAATAGCCAGAATCATTGGAACCAAGCTGTGCTGAATCTCACAGA TAATGTAAAGAAGATGTTTTCTGAGATGGATGACGTGCTCTTTTCGGCGTGCCTGGTCAA GTACAAGGAGGACGAAGAAACGCAAGCTTCACTGGAATCAAAGAGGAGGTTAACATGGGA GAAGCTAGAATCAGCTGCTTCTTTCCAGCCAGTGACGGGCCATACAGCCGTCCTGGTAGG CCGCCAACCCTCAGCAAATTTGATTGCCACCCTTATTTAGCATGTGTTCAGTGGAGGTGA AAAATTAGCATGTGTTCAGTGAAGGTGAAAATGGGGTTCTTCACTTTCTGGGGATGCTCA CCAACTGAACGACTTCAGACTTCACTATTTTTCCCTTATTTCTTTTTTATGTCTGGATTA ATAAGCAGTGCTGTAAGTTGTAACTAATTTTCTATGTTTATGCTCTGAAGGCAAAGCATG TATCGAAGTGCTTAAACTCCTTACCTGGTAAAAAAAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9519#0      CTCCTCCCTTCTCTCCTACCGAGTCCAGTGTCGAATAGCTAGAGGCGCCGGCCGCCATTG 60
consensus_9519#1      ------------------------------------------------------------
                                                                                  

consensus_9519#0      CTGGCCCCTGCACGCGCCGCCCCCCCTGCGCCACGGCCGTCGCCGCCGGCGGGAAGTGTA 120
consensus_9519#1      ------------------------------------------------------------
                                                                                  

consensus_9519#0      GCTCGCCGCCGCCACTCTGCGCGCACCCCCTTCGCCTTGCTCCGCCCGCCGCCGCCGCCG 180
consensus_9519#1      ------------------------------------------------------------
                                                                                  

consensus_9519#0      CCGCCGCCGCCGCCGACCTCGACTCCGGCCAGTGCAGCAATGGCGCTGGGAATGGGAACC 240
consensus_9519#1      ------------------------------------------------------------
                                                                                  

consensus_9519#0      CGATACAGCGCACCAGCAGCTGCGGCAGCATCCCATCTGGCCGCTCCACTTCCACCATCA 300
consensus_9519#1      ------------------------------------------------------------
                                                                                  

consensus_9519#0      AGCGCATGTCATCCGCCATCTTCCCGTCCAGCGTCGTGGCTGGTATTGAGCCACTTGTCT 360
consensus_9519#1      ------------------------------------------------------------
                                                                                  

consensus_9519#0      CGTTCAAGGATGTCCCCAACTCGGAGAAGCAGAATCTGTTCGTCAGCAAGCTGAATCTGT 420
consensus_9519#1      ------------------------------------------------------------
                                                                                  

consensus_9519#0      GCTGTGCTGTCTTTGACTTCTCGGATCCGAACAAGAGCTCGGCGGAGAAGGATATCAAGA 480
consensus_9519#1      ------------------------------------------------------------
                                                                                  

consensus_9519#0      GGCAGACGTTGTTGGATCTCATAGATTACGTGGATTCCAGCAGTTCCCGTTTCTCCGAGG 540
consensus_9519#1      ------------------------------------------------------------
                                                                                  

consensus_9519#0      CGGTGATTGCTGCTAGCTCTAGGATGTTTGCTGTCAACTTGTTCCGGGTGTTTCCTCCAA 600
consensus_9519#1      ------------------------------------------------------------
                                                                                  

consensus_9519#0      ATTACAGGTCCAGTTCATCTGGCGGCGGCGAGGGTGAAGAGGAGGAGCCAATGTTTGAGC 660
consensus_9519#1      ------------------------------------------------------------
                                                                                  

consensus_9519#0      CTGCATGGTGCCATCTGCAGCTTGTTTATGAGCTGCTACTGAAATTTATTGGATCCTCGT 720
consensus_9519#1      ------------------------------------------------------------
                                                                                  

consensus_9519#0      CCCTCGATGCAAAGGTAGGGAAAAAGTACTTTGATCACTCCTTCATTGTGAAACTGCTGA 780
consensus_9519#1      ------------------------------------------------------------
                                                                                  

consensus_9519#0      ATCTTCTTGATTCAGAGGATCCAAGGGAAAGGGATTGTTTGAAAACTATTCTGCACAGGA 840
consensus_9519#1      ------------------------------------------------------------
                                                                                  

consensus_9519#0      TTTATGGGAAGTTCATGGTTCACCGTCCTTTTATCCGGAAAGCAGTAAGCAATATATTCT 900
consensus_9519#1      ------------------------------------------------------------
                                                                                  

consensus_9519#0      ACCACTTTGTGTTTGAGACTGACCGGCATAACGGAATTGCTGAGCTGCTGGAGGTATTTG 960
consensus_9519#1      ------------------------------------------------------------
                                                                                  

consensus_9519#0      GCAGTGTTATTAGTGGCTTTGCGTTGCCTCTGAAGGAAGAACACAAAATCTTTCTTTGGA 1020
consensus_9519#1      ------------------------------------------------------------
                                                                                  

consensus_9519#0      GAGTTTTGGTTCCTTTACACAAACCAAAATCAGTTGGTGTGTATCTCCAGCAGTTGACAT 1080
consensus_9519#1      ------------------------------------------------------------
                                                                                  

consensus_9519#0      ATTGTGTGACACAGTTCATAGAAAAGGATCCCAAGCTTGCTAGCTCAGTAATTATTGGTT 1140
consensus_9519#1      ------------------------------------------------------------
                                                                                  

consensus_9519#0      TGCTAAGATATTGGCCAATAACAAATAGTCAGAAGGAGGTGATGTTTCTGAGTGAGATTG 1200
consensus_9519#1      ------------------------------------------------------------
                                                                                  

consensus_9519#0      AAGAGATCTTGGAGACAATCAGCACGGCGGAATTCCAGAAATGTATGGTACCTTTGTTTA 1260
consensus_9519#1      ------------------------------------------------------------
                                                                                  

consensus_9519#0      GGCGGATTGCTCAATGCATCAAGAGCTCTCACTTCAGGTAACTTGCCCAAATAAATATAA 1320
consensus_9519#1      ------------------------------------------------------------
                                                                                  

consensus_9519#0      CCTATCGATGTTTATTTTCTGTTTTTGCCACTATGCATTTCCCTCACCTAAGAAAAATAA 1380
consensus_9519#1      ------------------------------------------------------------
                                                                                  

consensus_9519#0      TATATAGGTGGTAAAAATAATATATCGGAGTACTACATATGAAAGTAGTTGTGGCCCTGT 1440
consensus_9519#1      ------------------------------------------------------------
                                                                                  

consensus_9519#0      TTGATTGATCAATTGCCACGCTGATGAATTACTATACTAGTCGCTAACTCTACCGCTTCA 1500
consensus_9519#1      ------------------------------------------------------------
                                                                                  

consensus_9519#0      CCTAGACATTTTATTATATAGGTGGTAAAATTTTATGTAAACATCACTCAGTTGAAATGG 1560
consensus_9519#1      ------------------------------------------------------------
                                                                                  

consensus_9519#0      ATCATGATCGTAAAGCTCACATGGTATATAGGGTTTTTTTGGTTGCATCATTTATGTAAG 1620
consensus_9519#1      ------------------------------------------------------------
                                                                                  

consensus_9519#0      GTATGAAAGCATTACCTGTTGACTTGCCAAATGGATGAGATAATAGATGTCTGATGGTCC 1680
consensus_9519#1      ------------------------------------------------------------
                                                                                  

consensus_9519#0      GAAATAAATGTGGACAACAATAGTGGGCCATTATGTTATCAACTAATCATGCTTTGGGCA 1740
consensus_9519#1      ------------------------------------------------------------
                                                                                  

consensus_9519#0      TGGGGTTGCTCTGTACTGTTAATATCACAAATGTGAGATATTTGGACCAGCATTAAGAAT 1800
consensus_9519#1      -------------------------------TGGGAGACAATCAGCACGGCG----GAAT 25
                                                     ** **** * *  *  * **     ****

consensus_9519#0      TGAAGACATTTGTCTGCCATGACAGACTAATGCTTTTTATCCAAGTAATTGCCTCAACGA 1860
consensus_9519#1      TCCAGAAAT--GTATGGTACCTTTGTTTAG-GCGGATTGCTCAA-----TGCATCAA-GA 76
                      *  *** **  ** **  *     *  **  **   **   ***     *** **** **

consensus_9519#0      GATGGGTTTTTTCAGGTTGCTGAACGGGCGCTTTTCATATGGAACAACGATAACGTTATT 1920
consensus_9519#1      GCTCT-CACTTCCAGGTTGCTGAACGGGCGCTTTTCATATGGAACAACGATAACGTTATT 135
                      * *      ** ************************************************

consensus_9519#0      AGCTT-GATTGCACAAAACCGCCAAATGATCATGCCTATCATTGTTCCAGCATTGGAACA 1979
consensus_9519#1      AGCTTAGATTGCACAAAACCGCCAAATGATCATGCCTATCATTGTTCCAGCATTGGAACA 195
                      ***** ******************************************************

consensus_9519#0      TAATAGCCAGAATCATTGGAACCAAGCTGTCCTGAATCTCACAGATAATGTAAAGAAGAT 2039
consensus_9519#1      TAATAGCCAGAATCATTGGAACCAAGCTGTGCTGAATCTCACAGATAATGTAAAGAAGAT 255
                      ****************************** *****************************

consensus_9519#0      GTTTTCTGAGATGGATGACGTGCTCTTTTCGGCGTGCCTGGTCAAGTACAAGGAGGACGA 2099
consensus_9519#1      GTTTTCTGAGATGGATGACGTGCTCTTTTCGGCGTGCCTGGTCAAGTACAAGGAGGACGA 315
                      ************************************************************

consensus_9519#0      AGAAAGGCAAGCTTCACTGGAATCAAAGAGGAGGTTAACATGGGAGAAGCTAGAATCAGC 2159
consensus_9519#1      AGAAACGCAAGCTTCACTGGAATCAAAGAGGAGGTTAACATGGGAGAAGCTAGAATCAGC 375
                      ***** ******************************************************

consensus_9519#0      TGCTTCTTTCCAGCCAGTGACGGGCCATACAGCCGTCCTGGTAGGCCGCCAACCCTCAGC 2219
consensus_9519#1      TGCTTCTTTCCAGCCAGTGACGGGCCATACAGCCGTCCTGGTAGGCCGCCAACCCTCAGC 435
                      ************************************************************

consensus_9519#0      AAATTTGATTGCCACCCTTATT-AGCATGTGTTCAGTGGAGGTGAAAAATTAGCATGTGT 2278
consensus_9519#1      AAATTTGATTGCCACCCTTATTTAGCATGTGTTCAGTGGAGGTGAAAAATTAGCATGTGT 495
                      ********************** *************************************

consensus_9519#0      TCAGTGAAGGTGAAAATGGGGTTCTTCACTTTCTGGTGATGCTCACCAACTGAACGACTT 2338
consensus_9519#1      TCAGTGAAGGTGAAAATGGGGTTCTTCACTTTCTGGGGATGCTCACCAACTGAACGACTT 555
                      ************************************ ***********************

consensus_9519#0      CAGACTTCACTATTTTCCCCTTATTTCTTTTTTATGTCTGTATTAGTAAGCAGTGCTGTA 2398
consensus_9519#1      CAGACTTCACTATTTTTCCCTTATTTCTTTTTTATGTCTGGATTAATAAGCAGTGCTGTA 615
                      **************** *********************** **** **************

consensus_9519#0      AGTTGTAACTATTTTCGTATGTTTATGCTCTGAAGGCAAAGCATGTATCGA-GTGCTTAA 2457
consensus_9519#1      AGTTGTAACTAATTTTCTATGTTTATGCTCTGAAGGCAAAGCATGTATCGAAGTGCTTAA 675
                      *********** ***  ********************************** ********

consensus_9519#0      ACTCCTTACCTGTATCTTTGCCTGTTTATTTATGAGCAATTTCCTACGCCTAAACTCACT 2517
consensus_9519#1      ACTCCTTACCTGG---------TAAAAAAAAAAAAAAAA--------------------- 705
                      ************          *    *   *  *  **                     

consensus_9519#0      CTTCTTCTGGTCATGGTTGCTCAAGCAACTTCTAATACGTTGATTCAAAAAAAAAAAAAA 2577
consensus_9519#1      ------------------------------------------------------------
                                                                                  

consensus_9519#0      AAAAAAAAAAAAAA 2591
consensus_9519#1      --------------
                                    




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)