These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9525#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1024 fasta sequence [CTCCCACCACCCTCGTCTCTCCCCTCCACTTCGCGAGACCTCCAAAACCCTAGTTTCGTCGGCGATGGCGGCGGCGGCGGCGGCGGGGGCGGCGGCGGGTGGGGGGTTCGTTGGGGAGAGGAGGAAGCTGTTCGTGGGAGGGATCCCGACGTCGGCGCAGGAGGCGGAGCTGCGGGGCCACTTCGGGCAGTACGGGGCGGTGAGGTCGGTGATCGTGATGCGGGACAAGGAGACCGGGCATGGCCGGGGGTTCGGGTTCGTGGAGTTCGAGGAGGAGGAGGACGCCGCCAGGGCGCTCGGCGACGGGGAGCACCCCAGGCACCTCATCTGCGGCCGCGTCGTTGATGTCAAGAGGGCTAGGGCAAGGCCTCAACGAAACCATGATGATCAATCTTCACAGCATCAGCACTTCGGACAGGGTCAGGATCAGGGTCACCAGCCAGCACCTGTGAGTGGTACAGAGGATGGCGGCGACGGCATGAACTATGCTTCGAAGAAGGTCTTTATTGGTGGTCTGCGGGACAACATCACTGAGGAGGAGTTCAAGACATATTTCGAGAGTTTTGGCACCGTAACAGATGTGGTAGTCATATATGACAGTATGACAAACAGGTCTAGGGGGTTTGGTTTCGTCACCTTTGACTCAGAGGAAGCGGTGAGGAAGGTGATAGAACACAGTTTTCATGACTTGAAAGGAACAAGGGTAGAAGCCAAGATTGCCATCCCCAAGGATGCTTCGTATTACCGTAATGGCAGAGGTCGTGGCTCAAGAAACTTTGGTGGAAGGGGTCATGCTGGTTTTGATGGTCCCTCGTACCAACCATACAATGACAGATATGGTTTCTACAACAGCTATAATATGCCTCAACCTGTTCCACCACATCCCTACTATCCTGGTGTATATTATGGTATGGG-AGGAGGTTATCCCTATGCGAATGCATATTCAAACATGGGAGCCCCTGCTAATATTCCTCCAGGCATGATGACNAGGCGTCCAGTTTATGGTGCATATCCTCCAATGTTT] [+] EMBL AK073437 [CTCCCACCACCCTCGTCTCTCCCCTCCACTTCGCGAGACCTCCAAAACCCTAGTTTCGTCGGCGATGGCGGCGGCGGCGGCGGCGGGGGCGGCGGCGGGTGGGGGGTTCGTTGGGGAGAGGAGGAAGCTGTTCGTGGGAGGGATCCCGACGTCGGCGCAGGAGGCGGAGCTGCGGGGCCACTTCGGGCAGTACGGGGCGGTGAGGTCGGTGATCGTGATGCGGGACAAGGAGACCGGGCATGGCCGGGGGTTCGGGTTCGTGGAGTTCGAGGAGGAGGAGGACGCCGCCAGGGCGCTCGGCGACGGGGAGCACCCCAGGCACCTCATCTGCGGCCGCGTCGTTGATGTCAAGAGGGCTAGGGCAAGGCCTCAACGAAACCATGATGATCAATCTTCACAGCATCAGCACTTCGGACAGGGTCAGGATCAGGGTCACCAGCCAGCACCTGTGAGTGGTACAGAGGATGGCGGCGACGGCATGAACTATGCTTCGAAGAAGGTCTTTATTGGTGGTCTGCGGGACAACATCACTGAGGAGGAGTTCAAGACATATTTCGAGAGTTTTGGCACCGTAACAGATGTGGTAGTCATATATGACAGTATGACAAACGGGTCTAGGGGGTTTGGTTTCGTCACCTTTGACTCAGAGGAAGCGGTGAGGAAGGTGATAGAACACAGTTTTCATGACTTGAAAGGAACAAGGGTAGAAGCCAAGATTGCCATCCCCAAGGATGCTTCGTATTACCGTAATGGCAGAGGTCGTGGCTCAAGAAACTTTGGTGGAAGGGGTCATGCTGGTTTTGATGGTCCCTCGTACCAACCATACAATGACAGATATGGTTTCTACAACAGCTATAATATGCCTCAACCTGTTCCACCACATCCCTACTATCCTGGTGTATATTATGGTATGGG AGGAGGTTATCCCTATGCGAATGCATATTCAAACATGGGAGCCCCTGCTAATATTCCTCC ] [+] EMBL CB658915 [ CCCCTCCACTTCGCGAGACCTCCAAAACCCTAGTTTCGTCGGCGATGGCGGCGGCGGCGGCGGCGGGGGCGGCGGCGGGTGGGGGGTTCGTTGGGGAGAGGAGGAAGCTGTTCGTGGGAGGGATCCCGACGTCGGCGCAGGAGGCGGAGCTGCGGGGCCACTTCGGGCAGTACGGGGCGGTGAGGTCGGTGATCGTGATGCGGGACAAGGAGACCGGGCATGGCCGGGGGTTCGGGTTCGTGGAGTTCGAGGAGGAGGAGGACGCCGCCAGGGCGCTCGGCGACGGGGAGCACCCCAGGCACCTCATCTGCGGCCGCGTCGTTGATGTCAAGAGGGCTAGGGCAAGGCCTCAACGAAACCATGATGATCAATCTTCACAGCATCAGCACTTCGGACAGGGTCAGGATCAGGGTCACCAGCCAGCACCTGTGAGTGGTACAGAGGATGGCGGCGACGGCATGAACTATGCTTCGAAGAAGGTCTTTATTGGTGGTCTGCGGGACAACATCACTGAGGAGGAGTTCAAGACATATTTCGAGAGTTTTGGCACCGTAACAGATGTGGTAGTCATATATGACAGTATGACAAACAGGTCTAGGGGGTTTGGTTTCGTCACCTTTGACTCAGAGGAAGCGGTGAGGAAGGTGATAGAACACAGTTTTCATGACTTGAAAGGAACAAGGGTAGAAGCCAAGATTGCCATCCCCAAGGATGCTTCGTATTACCGTAATGGCAGAGGTCGTGGCTCAAGAAACTTTGGTGGAAGGGGTCATGCTGGTTTT ] [+] EMBL CB643838 [ ACTTCCCGAGACCTCCAAAACCCTAGTTTCGTCGGCGATGGCGGCGGCGGCGGCGGCGGGGGCGGCGGCGGGTGGGGGGTTCGTTGGGGAGAGGAGGAAGCTGTTCGTGGGAGGGATCCCGACGTCGGCGCAGGAGGCGGAGCTGCGGGGCCACTTCGGGCAGTACGGGGCGGTGAGGTCGGTGATCGTGATGCGGGACAAGGAGACCGGGCATGGCCGGGGGTTCGGGTTCGTGGAGTTCGAGGAGGAGGAGGACGCCGCCAGGGCGCTCGGCGACGGGGAGCACCCCAGGCACCTCATCTGCGGCCGCGTCGTTGATGTCAAGAGGGCTAGGGCAAGGCCTCAACGAAACCATGATGATCAATCTTCACAGCATCAGCACTTCGGACAGGGTCAGGATCAGGGTCACCAGCCAGCACCTGTGAGTGGTACAGAGGATGGCGGCGACGGCATGAACTATGCTTCGAAGAAGGTCTTTATTGGTGGTCTGCGGGACAACATCACTGAGGAGGAGTTCAAGACATATTTCGAGAGTTTTGGCACCGTAACAGATGTGGTAGTCATATATGACAGTATGACAAACAGGTCTAGGGGGTTTGGTTTCGTCACCTTTGACTCACAGGAAGCGGTGAGGAACGTGATAGAACACAGTTTTCATGACTTGAAAGGAACAAGGGTAGAAGCCAAG ] [+] EMBL BF889448 [ GGGGTTCGTTGGGGAGAGGAGGAAGCTGTTCGTGGGAGGGATCCCGACGTCGGCGCATGANGCGGAGCTGCGGGGCCACTTCGGGCAGTACGGGGCGGTGAGGTCGGTGATCGTGATGCGGGACAAGGAGACCGGGCATGGCCGGGGGTTCGGGTTCGTGGAGTTCGAGGAGGAGGAGGACGCCGCCAGGGCGCTCGGCGACGGGGAGCACCCCAGGCACCTCATCTGCGGCCGCGTCGTTGATGTCAAGAGGGCTAGGGCAAGGCCTCAACGAAACCATGATGATCAATCTTCACAGCATCANCACTTCGGACAGGGTCAGGATCAGGGTCACCAGCCAGCACCTGTGAGTGGTACAGAGGATGGCGGCGACGGCATGAACTATGCTTCGAAGAAAGTCT ] [+] EMBL AU088622 [ GTCAAGAGGGCTAGGGCAAGGCCTCAACGAAACCATGATGATCAATCTTCACAGCATCAGCACTTCGGACAGGGTCAGGATCAGGGTCACCAGCCAGCACCTGTGAGTGGTACAGAGGATGGCGGCGACGGCATGAACTATGCTTCGAAGAAGGTCTTTATTGGTGGTCTGCGGGACAACATCACTGAGGAGGAGTTCAAGACATATTTCGAGAGTTTTGGCACCGTAACAGATGTGGTAGTCATATATGACAGTATGACAAACAGGTCTAGGGGGTTTGGTTTCGTCACCTTTGACTCAGAGGAAGCGGTGAGGAAGGTGATAGAACACAGTTTTCATGACTTGAAAGGAACAAGGGTAGAAGCCAAGATTGCCATCCCCAAGGATGCTTCGTATTACCGTAATGGCAGAGGTCGTGGCTCAAGAAACTTTGGTGGAAGGGGTCATGCTGGTTTTGATGGTCCCTCGTACCAACCATACAATGACAGATATGGTTTCTACAACAGCTATAATATGCCTCAACCTGTTCCACCACATCCCTACTATCCTGGTGTATATTATGGTATGGGNAAGGGGTTATCCCTATGCGAATGCATATTCAAACATGGGAGCCCCTGCTAATATTCCTNCAGGCATGATGACNAGGCGTCCAGTTTATGGTGCATATCCTCCAATGTTT] [-] EMBL CB643839 [ TGCCATCCCCAAGGATGCTTCGTATTACCGTAATGGCAGAGGTCGTGGCTCAAGAAACTTTGGTGGAAGGGGTCATGCTGGTTTTGATGGTCCCTCGTACCAACCATACAATGACAGATATGGTTTCTACAACAGCTATAATATGCCTCAACCTGTTCCACCACATCCCTACTATCCTGGTGTATATTATGGTATGGG AGGAGGTTATCCCTATGCGAATGCATATTCAAACATGGGAGCCCCTGCTAATATTCCTCCA ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||