cluster # 9532

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Oryza sativa
cluster # 9532 cluster # 9532 Sequences # 6 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9532#0 length = 547 sequences # 6

consensusID : consensus_9532#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 547
fasta sequence

                              [AAGTCACTCCCCAAATTGCCATCGGAGGAAAC-GGGTCCATTTGATTCAAGTCATCTGAAGAACA-CTGAACTGAGCACAGGTAACATTCAGGAATCAGGGTCGACGACACCAAATCAACAAGAAACTGAGTCGAACACCAGCATTTCCGAGTCGATCCAAGACAGGATTGCAACAGGTGGGCAAGAACTCGACGAACAGATAATTG-CCTAGAGAAGATCGAAGAGCCCGGTGGTCAAATCCTTTTGGTCCGTGATGGATGGTGTGCTGAAGCTTTGCCCCCATATTGTGCTTTAACTGTTTGAGTAGTAACTAGTTGCC-AGTATTTCTTTTTTCTTTTTC---TTTTTTTTTTTGTGACGAACCCTACCTCTTCTT-CCTGTGTATTGCGTTGTCGCGATGGCTTTTGTTCATATATCGCTAGTGAGGCTCCAGTTGTCCTTCGCTGTGTCTATTTACTCCTTTGCTGTAAGTGCCCTGCTTCACTGTTATGTATAATCAATCAGTGAGAATTTTGTTGCAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAA]

[+] EMBL AU091395             [AAGTCACTCCCCAAATTGCCATCGGAGGAAAC GGGTCCATTTGATTCAAGTCATCTGAAGAACA CTGAACTGAGCACAGGTAACATTCAGGAATCAGGGTCGACGACACCAAATCAACAAGAAACTGAGTCGAACACCAGCATTTCCGAGTCGATCCAAGACAGGATTGCAACAGGTGGGCAAGAACTCGACGAACAGATAATTG CCTAGAGAAGATCGAAGAGCCCGGTGGTCAAATCCTTTTGGTCCGTGATGGATGGTGTGCTGAAGCTTTGCCCCCATATTGTGCTTTAACTGTTTGAGTAGTAACTAGTTGCC AGTATTTCTTTTTTCTTTTTC   TTTTTTTTTTTGTGACGAACCCTACCTCTTCTT CCTGTGTATTGCGTTGTCGCGATGGCTTTTGTTCATATATCGCTAGTGAGGCTCCAGTTGTCCTTaaaana                                                                                                        ]
[+] EMBL AU173399             [                         AGGAAAC GGGTCCATTTGATTCAAGTCATCTGAAGAACA CTGAACTGAGCACAGGTAACATTCAGGAATCAGGGTCGACGACACCAAATCAACAAGAAACTGAGTCGAACACCAGCATTTCCGAGTCGATCCAAGACAGGATTGCAACAGGTGGGCAAGAACTCGACGAACAGATAATTG CCTAGAGAAGATCGAAGAGCCCGGTGGTCAAATCCTTTTGGTCCGTGATGGATGGTGTGCTGAAGCTTTGCCCCCATATTGTGCTTTAACTGTTTGAGTAGTAACTAGTTGCCAAGTATTTCTTTTTTCTTTTTC   TTTTTTTTTTTGTGACGAACCCTACCTCTTCTT CCTGTGTATTGCGTTGTCGCGATGGCTTTTGTTCATATATCGCTAGTGAGGCTCCAGTTGTCCTTCGCTGTGTCTAaaaaaa                                                                                             ]
[+] EMBL BQ908172             [                            AAACGGGGTCCATTTGATTCAAGTCATCTGAAGAACA CTGAACTGAGCACAGGTAACATTCAGGAATCAGGGTCGACGACACCAAATCAACAAGAAACTGAGTCGAACACCAGCATTTCCGAGTCGATCCAAGACAGGATTGCAACAGGTGGGCAAGAACTCGACGAACAGATAATCGCCCTAGAGAAGATCGAGGAGCCCGGTGGTCAAATCCTTTTGGTCCGTGATGGATGGTGTGCTGAAGCTTTGCCCCCATATTGTGCTTTAACTGTTTGAGTAGTAACTAGTTGCC AGTATTTCTTTTTTCTTTTTCTTTTTTTTTTTTTTGTGACGAACCCTACCTCTTCTT CCTGTGTATTGCGTTGTCGCGATGGCTTTTGTTCATATATCGCAAGTGAGGCTCCAGTTGTCCTTCGCTGTGTCTATTTACTCCTTTGCTGTAAGTGCCCTGCTTCACTGTTATGTATAATCAATCAGTGAGAATTTTGTTGCAAAAAAA                         ]
[+] EMBL BQ908223             [                                             TTCAAGTCATCTGAAGAACACCTGAACTGAGCACAGGTAACATTCAGGAATCAGGGTCGACGACACCAAATCAACAAGAAACTGAGTCGAACACCAGCATTTCCGAGTCGATCCAAGACAGGATTGCAACAGGTGGGCAAGAACTCGACGAACAGATAATCG CCTAGAGAAGATCGAGGAGCCCGGTGGTCAAATCCTTTTGGTCCGTGATGGATGGTGTGCTGAAGCTTTGCCCCCATATTGTGCTTTAACTGTTTGAGTAGTAACTAGTTGCC AGTATTTCTTTTTTCTTTTTCTTTTTTTTTTTTTTGTGACGAACCCTACCTCTTCTT CCTGTGTATTGCGTTGTCGCGATGGCTTTTGTTCATATATCGCAAGTGAGGCTCCAGTTGTCCTTCGCTGTGTCTATTTACTCCTTTGCTGTAAGTGCCCTGCTTCACTGTTATGTATAATC ATCAGTGAGAATTTTGTTGCAAAAAAA                         ]
[-] EMBL CF277093             [                                                                                         CAGGAATCAGGGTCGACGACACCAAATCAACAAGAAATTGAGTCGAACACCAGCATTTCCGAGTCGATCCAAGACAGGATTGCAACAGGTGGGCAAGAACTCGACGAACAGATAATTG CCTAAAGAAGATCGAAGAGCCCGGTGGTCAAATCCTTTTGGTCCGTGATGGATGGTGTGCTGAAGCTTTGCCCCCATATTGTGCTTTAACTGTTTGAGTAGTAACTAGTTGCC AGTATTTCTTTTTTCTTTTTC    TTTTTTTTTAGAAACGAACCCTACCTTTTTTTCCCTGTGTATTGCGTTGTCGCGAAGGCTTTTGTTCATATATCGCTAGTGAGGCTCCAGTTGTCCTTCGCTGTGTCTATTTACTCCTTTGCTGTAAGTGCCCTGCTTCACTGTTATGTATAATCAATCAGTGAGAATTTTGTTGCAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAA]
[+] EMBL CA998466             [                                                                                                                                                                 GACAGGATTGCAACAGGTGGGCAAGAACTCGACGAACAGATAATTG CCTAGAGAAGATCGAAGAGCCCGGTGGTCAAATCCTTTTGGTCCGTGATGGATGGTGTGCTGAAGCTTTGCCCCCATATTGTGCTTTAACTGTTTGAGTAGTAACTAGTTGCC AGTATTTCTTTTTTCTTTTTC   TTTTTTTTTTTGTGACGAACCCTACCTCTTCTT CCTGTGTATTGCGTTGTCGCGATGGCTTTTGTTCATATATCGCTAGTGAGGCTCCAGTTGTCCTTCGCTGTGTCTATTTACTCCTTTGCTGTAAGTGCCCTGCTTCACTGTTATGTATAATCAATCAGTGAGAATTTT                                     ]




>consensus_9532#0
AAGTCACTCCCCAAATTGCCATCGGAGGAAACGGGTCCATTTGATTCAAGTCATCTGAAG
AACACTGAACTGAGCACAGGTAACATTCAGGAATCAGGGTCGACGACACCAAATCAACAA
GAAACTGAGTCGAACACCAGCATTTCCGAGTCGATCCAAGACAGGATTGCAACAGGTGGG
CAAGAACTCGACGAACAGATAATTGCCTAGAGAAGATCGAAGAGCCCGGTGGTCAAATCC
TTTTGGTCCGTGATGGATGGTGTGCTGAAGCTTTGCCCCCATATTGTGCTTTAACTGTTT
GAGTAGTAACTAGTTGCCAGTATTTCTTTTTTCTTTTTCTTTTTTTTTTTGTGACGAACC
CTACCTCTTCTTCCTGTGTATTGCGTTGTCGCGATGGCTTTTGTTCATATATCGCTAGTG
AGGCTCCAGTTGTCCTTCGCTGTGTCTATTTACTCCTTTGCTGTAAGTGCCCTGCTTCAC
TGTTATGTATAATCAATCAGTGAGAATTTTGTTGCAAAAAAAAAAAAAAAAAAAAAAAGA
AAAAAAA

clustalw multiple alignements is not computed in this case