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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9559#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 1552 fasta sequence
[ACATGTGAGGTCCCTCATCTTATCACCGAATTACAAAATTGTCCCTCAACCGAAAAACCAGATATATGATATCCCTTATCTTACAAAACCAGGTCAGTTTATGTCCTTTGGCGGTATTGACTCCGGTTTTATCCCATGCTGACTCAGCTATCACGTCGGATGAAACTGGAGTCAACCAGAATCAATATTGCCTAAGGACTTAAAGTGATCCGGTTTTATAAGTTGAGGGACGTTATATATCTGTTTTTTTCTTTGTTTGGGGATGATTTTGTGATTCGGTGAAAATATGAGCGACCTCAGATGCATTTTTTCCACAAAAAAAATCGCTTCATGATAGACAAAAAAATATATGGGCCAGATAACCAATGCAAGCAAAAAGCAGGAGTCCAACAGCACTTTAAAAGAGTCCATGAGGAATTTGGAAATAACAAACTCCTGTTGGCCTATTCTGGTATGTTGTCATATTTTTCCAATACCTGTTAATACTTAGTAATTTTATGAACGTTTGGACCCAGACAGCTTGAACCTTACTGCTTTCAAGATTCTGTACATCAGTTTGTAATTATGTGAACGTATGGACTTCGACACAAAAAACAACTCATGCATGTAATAATTCCCTTGATATGCAAAACTCCAAGCTTAATTTTTCAGTGTTTTAGATGCAAGGTTTCTTTTGATCATTTCCTTATGTGGTCTATATGTGCAGGGATGGTGTGAGCGAGTCTCAATTTAGCCAAGTACTGAATGTTGAGCTTAATCAAATTATAAAGGCATATCAATATATGGATCAGGGGCCAATTCCTAAGTTCACAGTGATCATTGCTCAAAAGAATCACCACACAAAACTTTTCCAAGAAAATACTCCAGACAACGTTCCTCCAGGGACTGTTGTAGATTCTGGTATTGTTCATCCAAGACAGTATGATTTCTACATGTATGCTCATGCTGGACCTATAGGTACCTCAAGGCCCACCCATTACCATGTCTTGCTCGATGAGATTGGTTTCTTGCCCGATGACGTGCAGAAACTAGTTTTGTCGCTTTCTTATGTGTATCAGAGGAGCACCACTGCAATATCTGTTGTGGCACCTATCTGTTATGCTCATCTCGCAGCAGCGCAGATGGGCCAGTTCATGAAATTCGAGGAATTCGCTGAGACTTCGTCTGGAAGTGGTGGTGTCCCTTCGTCATCAGGAGCAGTGGTCCCAGAGTTGCCGCGCCTGCATGCTGATGTCTGCAGTTCGATGTTCTTTTGTTGAGGTGGTGTTAGTCAGCTAGTGTGCAGCAGGGCTGATCCTTCTTTTTTTTTTGAAGGAACCAAATACGGAGTACTTGTTAGGCACTTTTGTAGTACTCTAGATTGATACTATGAGATACATCTAGGTTGGGTAGGGAGCATTTTTTTTTAGATGATATAGTGCTCCTAATGATATAGTTCTGTTAGTGCTCAGCTATTAGGAAGTAAAGGCTTACCCTTGATGGTAGGTTTATGAATTCAAGACGCTAACTTTGCGCCATATCTAATTGTCAACCAGTTACCAAAAAAAAAAGA]
[+] EMBL CB677346 [ACATGTGAGGTCCCTCATCTTATCACCGAATTACAAAATTGTCCCTCAACCGAAAAACCAGATATATGATATCCCTTATCTTACAAAACCAGGTCAGTTTATGTCCTTTGGCGGTATTGACTCCGGTTTTATCCCATGCTGACTCAGCTATCACGTCGGATGAAACTGGAGTCAACCAGAATCAATATTGCCTAAGGACTTAAAGTGATCCGGTTTTATAAGTTGAGGGACGTTATATATCTGTTTTTTTCTTTGTTTGGGGATGATTTTGTGATTCGGTGAAAATATGAGCGACCTCAGATGCATTTTTTCCACAAAAAAAATCGCTTCATGATAGACAAAAAAATATATGGGCCAGATAACCAATGCAAGCAAAAAGCAGGAGTCCAACAGCACTTTAAAAGAGTCCATGAGGAATTTGGAAATAACAAACTCCTGTTGGCCTATTCTGGTATGTTGTCATATTTTTCCAATACCTGTTAATACTTAGTAATTTTATGAACGTTTGGACCCAGACAGCTTGAACCTTACTGCTTTCAAGATTCTGTACATCAGTTTGTAATTATGTGAACGTATGGACTTCGACACAAAAAACAACTCATGCATGTAATAATTCCCTTGATATGCAAAACTCCAAGCTTAATTTTTCAGTGTTTTAGATGCAAGGTTTCTTTTGATCATTTCCTTATGTGGTCTATATGTGCAGGGATGGTGTGAGCGAGTCTCAATTTAGCCAAGTACTGAATGTTGAGCTTAATCAAATTATAAAGGCATATCAATATATGGATCAGGGGCCAATTCCTAAGTTCACAGTGATCATTGCTCAAAAGAATCACCACACAA ]
[-] EMBL CB674255 [ AATATATGGATCAGGGGCCAATTCCTAAGTTCACAGTGATCATTGCTCAAAAGAATCACCACACAAAACTTTTCCAAGAAAATACTCCAGACAACGTTCCTCCAGGGACTGTTGTAGATTCTGGTATTGTTCATCCAAGACAGTATGATTTCTACATGTATGCTCATGCTGGACCTATAGGTACCTCAAGGCCCACCCATTACCATGTCTTGCTCGATGAGATTGGTTTCTTGCCCGATGACGTGCAGAAACTAGTTTTGTCGCTTTCTTATGTGTATCAGAGGAGCACCACTGCAATATCTGTTGTGGCACCTATCTGTTATGCTCATCTCGCAGCAGCGCAGATGGGCCAGTTCATGAAATTCGAGGAATTCGCTGAGACTTCGTCTGGAAGTGGTGGTGTCCCTTCGTCATCAGGAGCAGTGGTCCCAGAGTTGCCGCGCCTGCATGCTGATGTCTGCAGTTCGATGTTCTTTTGTTGAGGTGGTGTTAGTCAGCTAGTGTGCAGCAGGGCTGATCCTTCTTTTTTTTTTGAAGGAACCAAATACGGAGTACTTGTTAGGCACTTTTGTAGTACTCTAGATTGATACTATGAGATACATCTAGGTTGGGTAGGGAGCATTTTTTTTTAGATGATATAGTGCTCCTAATGATATAGTTCTGTTAGTGCTCAGCTATTAGGAAGTAAAGGCTTACCCTTGATGGTAGGTTTATGAATTCAAGACGCTAACTTTGCGCCATATCTAATTGTCAACCAGTTACCAAAAAAAAAAGA]
consensusID : consensus_9559#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1389 fasta sequence
[AAAGCATGTTTGAAAAAGTGAAAGCAAACCTTCCTGGTCCTCCTGAATTTTTGCTGTGTGTTTTACCAGAAAGGAAAAATTGTGATCTCTATGGGCCATGGAAGAAGAAAAACCTTCATGAGATGGGTATTATTACTCAATGCATTGTTCCTAGTGTTAAGATGAATGATCAGTACTATACCAATGTTCTTCTGAAAATCAATGCTAAGCTTGGTGGAATGAACTCCAAGCTTTCATTGGAGCATCGACATATGATTCCCATTGTCAATCAAACGCCCACATTAATTTTGGGAATGGATGTTTCACATGGTTCGCCAGGTCGAGCTGATGTACCATCAATTGCTGCGGTTGCTGGGTCCAGATGTTGGCCGCTGATATCACGCTACAGAGCATCTGTCCGGACCCAGTCTCCAAAGGTAGAGATGATTGATTCTCTTTTTAAGCCACTGGACGATGGAAAAGATGATGGCATAATAAGGGAACTTCTACTGGACTTCTACAAGACCAGTCAACAAAGAAAGCCGAAGCAGATAATCATTTTCAGGGATGGTGTGAGCGAGTCTCAATTTAGCCAAGTACTGAATGTTGAGCTTAATCAAATTATAAAGGCATATCAATATATGGATCAGGGGCCAATTCCTAAGTTCACAGTGATCATTGCTCAAAAGAATCACCACACAAAACTTTTCCAAGAAAATACTCCAGACAACGTTCCTCCAGGGACTGTTGTAGATTCTGGTATTGTTCATCCAAGACAGTATGATTTCTACATGTATGCTCATGCTGGACCTATAGGTACCTCAAGGCCCACCCATTACCATGTCTTGCTCGATGAGATTGGTTTCTTGCCCGATGACGTGCAGAAACTAGTTTTGTCGCTTTCTTATGTGTATCAGAGGAGCACCACTGCAATATCTGTTGTGGCACCTATCTGTTATGCTCATCTCGCAGCAGCGCAGATGGGCCAGTTCATGAAATTCGAGGAATTCGCTGA-ACTTCGTCTGGAAGTGGTGGTGT-CCTTCGTCATCAGGAGCAGTGG-CCCAGAATTGCCGCGCCTGCATGCTGATGTCTGCAGTTCGATG-TC-TTTGTTGAGGTGGTGGTAGT-AACTAGTGTGCAGCAGGGCTTGATCC-TC--TTTTTTTTTGAAGG-ACC-AAT-CCGAGTCCTTG-TAGGCACTTTTGTAGTACTCTAGATTGATACTATGAGATACATATAGGTTGGGTAGGGAGCATTTTTTTTTAGATGATATAGTGCTCCTAATGATATAGTTCTGTTAGTGCTCAGCTATTAGGAAGTAAAGGCTTACCCTTGATGGTAGGTTTATGAATTCAAGACGCTAACTTTGCGCCATATCTAATTGTCAACCAGTTAAACAGATGATTCGCAAAAAAAAAA]
[+] EMBL AY323483 [AAAGCATGTTTGAAAAAGTGAAAGCAAACCTTCCTGGTCCTCCTGAATTTTTGCTGTGTGTTTTACCAGAAAGGAAAAATTGTGATCTCTATGGGCCATGGAAGAAGAAAAACCTTCATGAGATGGGTATTATTACTCAATGCATTGTTCCTAGTGTTAAGATGAATGATCAGTACTATACCAATGTTCTTCTGAAAATCAATGCTAAGCTTGGTGGAATGAACTCCAAGCTTTCATTGGAGCATCGACATATGATTCCCATTGTCAATCAAACGCCCACATTAATTTTGGGAATGGATGTTTCACATGGTTCGCCAGGTCGAGCTGATGTACCATCAATTGCTGCGGTTGCTGGGTCCAGATGTTGGCCGCTGATATCACGCTACAGAGCATCTGTCCGGACCCAGTCTCCAAAGGTAGAGATGATTGATTCTCTTTTTAAGCCACTGGACGATGGAAAAGATGATGGCATAATAAGGGAACTTCTACTGGACTTCTACAAGACCAGTCAACAAAGAAAGCCGAAGCAGATAATCATTTTCAGGGATGGTGTGAGCGAGTCTCAATTTAGCCAAGTACTGAATGTTGAGCTTAATCAAATTATAAAGGCATATCAATATATGGATCAGGGGCCAATTCCTAAGTTCACAGTGATCATTGCTCAAAAGAATCACCACACAAAACTTTTCCAAGAAAATACTCCAGACAACGTTCCTCCAGGGACTGTTGTAGATTCTGGTATTGTTCATCCAAGACAGTATGATTTCTACATGTATGCTCATGCTGGACCTATAGGTACCTCAAGGCCCACCCATTACCATGTCTTGCTCGATGAGATTGGTTTCTTGCCCGATGACGTGCAGAAACTAGTTTTGTCGCTTTCTTATGTGTATCAGAGGAGCACCACTGCAATATCTGTTGTGGCACCTATCTGTTATGCTCATCTCGCAGCAGCGCAGATGGGCCAGTTCATGAAATTCGAGGAATTCGCTGA ACTTCG CTGGAAGTGGTGGTGT CCTTCGTCATCAGGAGCAGTGG CCCAGAATTGCCGCGCCTGCATGCTGATGTCTGCAGTTCGATG TC TTTGTTGAGGTGGTGGTAGT AACTAGTGTGCAGCAGGGCTTGATCC TC TTTTTTTTTGAAGG ACC AAT CCGAGTCCTTG TAGGCACTTTTGTAGTACTCTAGATTGATACTATGAGATACATATAGGTTGGGTAGGGAGCATTTTTTTTTAGATGATATAGTGCTCCTAATGATATAGTTCTGTTAGTGCTCAGCTATTAGGAAGTAAAGGCTTACCCTTGATGGTAGGTTTATGAATTCAAGACGCTAACTTTGCGCCATATCTAATTGTCAACCAGTTAAACAGATGATTCGCAAAAAAAAAA]
[+] EMBL AK101842 [ ACTATACCAATGTTCTTCTGAAAATCAATGCTAAGCTTGGTGGAATGAACTCCAAGCTTTCATTGGAGCATCGACATATGATTCCCATTGTCAATCAAACACCCACATTAATTTTGGGAATGGATGTTTCACATGGTTCGCCAGGTCGAGCTGATGTACCATCAATTGCTGCGGTTGTTGGGTCCAGATGTTGGCCGCTGATATCACGCTACAGAGCATCTGTCCGGACCCAGTCTCCAAAGGTAGAGATGATTGATTCTCTTTTTAAGCCACTGGACGATGGAAAAGATGATGGCATAATAAGGGAACTTCTACTGGACTTCTACAAGACCAGTCAACAAAGAAAGCCGAAGCAGATAATCATTTTCAGGGATGGTGTGAGCGAGTCTCAATTTAGCCAAGTACTGAATGTTGAGCTTAATCAAATTATAAAGGCATATCAATATATGGATCAGGGGCCAATTCCTAAGTTCACAGTGATCATTGCTCAAAAGAATCACCACACAAAACTTTTCCAAGAAAATACTCCAGACAACGTTCCTCCAGGGACTGTTGTAGATTCTGGTATTGTTCATCCAAGACAGTATGATTTCTACATGTATGCTCATGCTGGACCTATAGGTACCTCAAGGCCCACCCATTACCATGTCTTGCTCGATGAGATTGGTTTCTTGCCCGATGACGTGCAGAAACTAGTTTTGTCGCTTTCTTATGTGTATCAGAGGAGCACCACTGCAATATCTGTTGTGGCACCTATCTGTTATGCTCATCTCGCAGCAGCGCAGATGGGCCAGTTCATGAAATTCGAGGAATTCGCTGAGACTTCGTCTGGAAGTGGTGGTGTCCCTTCGTCATCAGGAGCAGTGGTCCCAGAGTTGCCGCGCCTGCATGCTGATGTCTGCAGTTCGATGTTCTTTTGTTGAGGTGGTGTTAGTCAGCTAGTGTGCAGCAGGGC TGATCCTTCTTTTTTTTTTTGAAGGAACCAAATACGGAGTACTTGTTAGGCACTTTTGTAGTACTCTAGATTGATACTATGAGATACATCTAGGTTGGGTAGGGAGCATTTTTTTTTAGATGATATAGTGCTCCTAATGATATAGTTCTGTTAGTGCTCAGCTATTAGGAAGTAAAGGCTTACCCTTGATGGTAGGTTTATGAATTCAAGACGCTAACTTTGCGCCATATCTAATTG ]
[+] EMBL AY072819 [ GATAATCATTTTCAGGGATGGTGTGAGCGAGTCTCAATTTAGCCAAGTACTGAATGTTGAGCTTAATCAAATTATAAAGGCATATCAATATATGGATCAGGGGCCAATTCCTAAGTTCACAGTGATCATTGCTCAAAAGAATCACCACACAAAACTTTTCCAAGAAAATACTCCAGACAACGTTCCTCCAGGGACTGTTGTAGATTCTGGTATTGTTCATCCAAGACAGTATGATTTCTACATGTATGCTCATGCTGGACCTATAGGTACCTCAAGGCCCACCCATTACCATGTCTTGCTCGATGAGATTGGTTTCTTGCCCGATGACGTGCAGAAACTAGTTTTGTCGCTTTCTTATGTGTATCAGAGGAGCACCACTGCAATATCTGTTGTGGCACCTATCTGTTATGCTCATCTCGCAGCAGCGCAGATGGGCCAGTTCATGAAATTCGAGGAATTCGCTGA ACTTCGTCTGGAAGTGGTGGTGT CCTTCGTCATCAGGAGCAGTGG CCCAGAATTGCCGCGCCTGCATGCTGATGTCTGCAGTTCGATG TC TTTGTTGAGGTGGTGGTAGT AACTAGTGTGCAGCAGGGCTTGATCC TC TTTTTTTTTGAAGG ACC AAT CCGAGTCCTTG TAGGCACTTTTGTAGTACTCTAGATTGATACTATGAGATACATATAGGTTGGGTAGGGAGCATTTTTTTTTAGATGATATAGTGCTCCTAATGATATAGTTCTGTTAGTGCTCAGCTATTAGGAAGTAAAGGCTTACCCTTGATGGTAGGTTTATGAATTCAAGACGCTAACTTTGCGCCATATCTAATTGTCAACCAGTTAAACAGATGATTCGCAAAAAAAAAA]
consensusID : consensus_9559#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 852 fasta sequence
[GCCCAGGGCCAAGAAAATGTTGAAAAACCTGAGAGTTAAAGCTATTCACAATAACATGGAGTTCAAGATCATTGGTCTGAGTGATGAGCCATGCTCTAGACAAACATTCCCCATGAAAGTACGAAATGGAAGCAGTGAAGGTGAAACCGTTGAAATTACTGTCCAGGAATATTTTAAGTCCAAGCAGGTGGATTTAACAATGCCTTATTTGCCATGTCTTGATGTGGGAAAACCAAAACGCCCAAATTATGTTCCAATTGAGCTGTGCCATATGGTATCACTTCAAAGATATACAAAGGCGCTTTCTTCTCAACAAAGAGCAACCTTGGTTGAAAAATCACGTCAGAAACCTCAAGAGCGCATGCGAGTTGTTACTGATGCTGTAAAAAACAATAGATATGATGATGATCCAATCTTATCTTCTTGTGGAATTAAAATTGAGAAACAACTCACTCGTGTCGATGGTCGTGTTCTGTCTGCACCAACGCTAGTCGTGGGGAATAGTGAAGATTGCATTCCAAACAGAGGCAGATGGAACTACAATAACAAGAGGCTATTTGAGCCTGTCAAGATTGAGCGTTGGGCAATTGTTAATTTCTCTGCTCGGTGTGACATGAGCCGGATCTCAAGAGACCTGATAAACTGTGGACGAACTAAAGGCATTGGCCATGGAAGAAGAAAAACCTTCATGAGATGGGTATTATTACTCAATGCATTGTTCCTAGTGTTAAGATGAATGATCAGTACTATACCAATGTTCTTCTGAAAATCAATGCTAAGCTTGGTGGAATGAACTCCAAGCTTTCATTGGAGCATCGACATAATGATTCCCATTGTCAATCAAACACCCAC]
[+] EMBL CB674254 [GCCCAGGGCCAAGAAAATGTTGAAAAACCTGAGAGTTAAAGCTATTCACAATAACATGGAGTTCAAGATCATTGGTCTGAGTGATGAGCCATGCTCTAGACAAACATTCCCCATGAAAGTACGAAATGGAAGCAGTGAAGGTGAAACCGTTGAAATTACTGTCCAGGAATATTTTAAGTCCAAGCAGGTGGATTTAACAATGCCTTATTTGCCATGTCTTGATGTGGGAAAACCAAAACGCCCAAATTATGTTCCAATTGAGCTGTGCCATATGGTATCACTTCAAAGATATACAAAGGCGCTTTCTTCTCAACAAAGAGCAACCTTGGTTGAAAAATCACGTCAGAAACCTCAAGAGCGCATGCGAGTTGTTACTGATGCTGTAAAAAACAATAGATATGATGATGATCCAATCTTATCTTCTTGTGGAATTAAAATTGAGAAACAACTCACTCGTGTCGATGGTCGTGTTCTGTCTGCACCAACGCTAGTCGTGGGGAATAGTGAAGATTGCATTCCAAACAGAGGCAGATGGAACTACAATAACAAGAGGCTATTTGAGCCTGTCAAGATTGAGCGTTGGGCAATTGTTAATTTCTCTGCTCGGTGTGACATGAGCCGGATCTCAAGAGACCTGATAAACTGTGGACGAACTAAAGGCATTGGCCATGGAAGAAGAAAAACCTTCATGAGATGGGTATTATTACTCAATGCATTGTTCCTAGTGTTAAGATGAATGATCAGTACTATACCAATGTTCTTCTGAAAATCAATGCTAAGCTTGGTGGAATGAACTCCAAGCTTTCATTGGAGCATCGACATAATGATTCCCATTGTCAATCAAACACCCAC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9559#0 ACATGTGAGGTCCCTCATCTTATCACCGAATTACAAAATTGTCCCTCAACCGAAAAACCA 60
consensus_9559#1 ------------------------------------------------------------
consensus_9559#2 ------------------------------------------------------------
consensus_9559#0 GATATATGATATCCCTTATCTTACAAAACCAGGTCAGTTTATGTCCTTTGGCGGTATTGA 120
consensus_9559#1 -------------------------AAAGCATGTTTGAAAAAGT-----GAAAGCAAACC 30
consensus_9559#2 ------------------------------------------------------------
consensus_9559#0 CTCCGGTTTTATCCCATGCTGACTCAGCTATCACGTCGGATGAAACTGGAGTCAACCAGA 180
consensus_9559#1 TTCCTGGTCC-TCCTGAATT---TTTGCTGT-GTGTTTTACCAGAAAGGAAA-AATTGTG 84
consensus_9559#2 ------------------------------------------------------------
consensus_9559#0 ATCAATATTGCCTAAGGACTTAAAGTGATCCGGTTTTATAAGTTGAGGGACGTTATATAT 240
consensus_9559#1 ATCTCTATGGGCCATGGAAGAAGAAAAACC----TTCATGAGATGGGTATTATTACTCAA 140
consensus_9559#2 ------------------------------------------------------------
consensus_9559#0 CTGTTTTTTTCTTTGTTTGGGGATGATTTTGTGATTCGGTGAAAATATGAGCGACCTCAG 300
consensus_9559#1 -TGCATTGTTCCTAGTGTTAAGATGA--------------------ATGATCAGTACTAT 179
consensus_9559#2 ------------------------------------------------------------
consensus_9559#0 ATGCATTTTTTCCACAAAAAAAATCGCTTCATGATAGACAAAAAAATATATGGGCCAGAT 360
consensus_9559#1 ACCAATGTTCTTCTGAAAA--------TCAATGCTAAGCTTGGTGGAATGAACTCCAAGC 231
consensus_9559#2 ------------------------------------------------------------
consensus_9559#0 AACCAATGCAAGCAAAAAGCAGGAGTCCAACAGCACTTTAAAAGAGTCCATGAGGAATTT 420
consensus_9559#1 TTTCATTGGAGCATCGACATATGATTCCCATTGTCAATCAAACG--CCCACATTAATTTT 289
consensus_9559#2 ------------------------------------------------------------
consensus_9559#0 GGAAATAACAAACTCCTGTTGGCCTATTCTGGTATGTTGTCATATTTTTCCAATACCTGT 480
consensus_9559#1 GGGAATGG-ATGTTTCACATGGTTCGCCAGGTCGAGCTGATGTACCAT--CAATTGCTGC 346
consensus_9559#2 ------------------------------------------------------------
consensus_9559#0 TAATACTTAGTAATTTTATGAACGTTTGGACCCAGACAGCTTGAACCTTACTGCTTTCAA 540
consensus_9559#1 GGTTGCTGGGT------CCAGATGTT-GGCCGCTGATA--TCACGCTACAGAGCATCTG- 396
consensus_9559#2 ------------------------------------------------------------
consensus_9559#0 GATTCTGTACATCAGTTTGTAATTATGTGAACGTATGGACTTCGACACAAAAAACAACTC 600
consensus_9559#1 ---TCCGGAC-CCAGTCTCCAAAGGTAGAGATGATTGATTCTCTTTTTAAG---CCACTG 449
consensus_9559#2 ------------------------------------------------------GCCCAG 6
*
consensus_9559#0 ATGCATGTAATAATTCCCTTGATATGCAAAACTCCAAGCTTAATTTTTCAGTGTTTTAGA 660
consensus_9559#1 GACGATGGAAAAG-----ATGATG-GCATAAT---AAGGGAACTTCTACTGGACTTC--- 497
consensus_9559#2 GGCCAAGAAAATG-----TTGAAAAACCTGAGAGTTAAAGCTATTCACAATAACATGGAG 61
* * ** *** * * * ** *
consensus_9559#0 TGCAAGGTTTCTTTTG--ATCATTTCCTTATGT---GGTCTAT-ATGTGCAGGGATGGTG 714
consensus_9559#1 TACAAGACCAGTCAAC--AAAGAAAGCCGAAGC---AGATAATCATTTTCAGGGATGGTG 552
consensus_9559#2 TTCAAGATCATTGGTCTGAGTGATGAGCCATGCTCTAGACAAACATTCCCCATGAAAGTA 121
* **** * * * * * * ** * ** **
consensus_9559#0 TGAGCGAGTCTCAATTTAGCCAAG--TACTGAATGTTGAGCTTAATCAAATTATAAAGGC 772
consensus_9559#1 TGAGCGAGTCTCAATTTAGCCAAG--TACTGAATGTTGAGCTTAATCAAATTATAAAGGC 610
consensus_9559#2 CGAAATGGAAGCAGTGAAGGTGAAACCGTTGAAATTACTGTCCAGGAATATTTTAAGTCC 181
** * ** * ** * **** * * * * *** *** *
consensus_9559#0 ATATCAATATATGGATCAGGGGCCAATTCCTAAGTTCACAGTGATCATTGCTCAAAAGAA 832
consensus_9559#1 ATATCAATATATGGATCAGGGGCCAATTCCTAAGTTCACAGTGATCATTGCTCAAAAGAA 670
consensus_9559#2 A----AGCAGGTGGATTTAA---CAATGCCTTATTTGCCATGTCTTGATGTGGGAAAACC 234
* * * ***** **** *** * ** ** * ** ***
consensus_9559#0 TCACCACACAAA--ACTTTTCCAAGAAAATACTCCAGACAACGTTCCTCCAGGGACTGTT 890
consensus_9559#1 TCACCACACAAA--ACTTTTCCAAGAAAATACTCCAGACAACGTTCCTCCAGGGACTGTT 728
consensus_9559#2 AAAACGCCCAAATTATGTTCCAATTGAGCTGTGCCATATGGTATCACTTCAAAGA----- 289
* * * **** * ** * * * * *** * * ** ** **
consensus_9559#0 GTAGATTCTGGTATTGTTCATCCAAGACAGTATGATTTCTACATGTATGCTCATGCTGGA 950
consensus_9559#1 GTAGATTCTGGTATTGTTCATCCAAGACAGTATGATTTCTACATGTATGCTCATGCTGGA 788
consensus_9559#2 -TATACAAAGGCGCTTTCTTCTCAACAAAGAGCAACCTTGGT-TGAAAAATCACGTCAGA 347
** * ** * * *** * ** * * ** * *** * **
consensus_9559#0 CCTATAGGTACCTCAAGGCCCACCCATTACCATGTCTTGCTCGATGAGATTGGTTTCTTG 1010
consensus_9559#1 CCTATAGGTACCTCAAGGCCCACCCATTACCATGTCTTGCTCGATGAGATTGGTTTCTTG 848
consensus_9559#2 AACCTCAAGAGCGCATG--CGAGTTGTTACTG-ATGCTGTAAAAAACAATAGATAT---- 400
* * * ** * * * **** * ** * ** * * *
consensus_9559#0 CCCGATGACGTGCAGAAACTAGTTTTGTCGCTTTCTTATGT-GTATCAGAGGAGCACCAC 1069
consensus_9559#1 CCCGATGACGTGCAGAAACTAGTTTTGTCGCTTTCTTATGT-GTATCAGAGGAGCACCAC 907
consensus_9559#2 ---GATGATG------ATCCAATCTTATCTTCTTGTGGAATTAAAATTGAGAAACAACTC 451
***** * * * * * ** ** ** * * * *** * ** * *
consensus_9559#0 TGCAATATCTGTTGTGGCACCTATCTGTTATGCTCATCTCGCAGCAGCGCAGATGGGCCA 1129
consensus_9559#1 TGCAATATCTGTTGTGGCACCTATCTGTTATGCTCATCTCGCAGCAGCGCAGATGGGCCA 967
consensus_9559#2 ACTCGTGTCGATGGTCGTGT---TCTGTCTGCACCAACGCTAGTCGTGGGGAATAGTGAA 508
* ** * ** * ***** ** * * * * ** * *
consensus_9559#0 GTTCATGAAATTCGAGGAATTCGCTGAGACTTCGTCTGGAAGTGGTGGTGTCCCTTCGTC 1189
consensus_9559#1 GTTCATGAAATTCGAGGAATTCGCTGA-ACTTCGTCTGGAAGTGGTGGTGTCC-TTCGTC 1025
consensus_9559#2 GATTGCATTCCAAACAGAGGCAGATGGAACTACAATAACAAGAGGCTATTTGAGCCTGTC 568
* * ** * ** *** * *** ** * * ***
consensus_9559#0 ATCAG-GAGCAGTGGTCCCAGAGTTGCCGCGCCTGCATGCTGATGTCTGCAGTTCGATGT 1248
consensus_9559#1 ATCAG-GAGCAGTGG-CCCAGAATTGCCGCGCCTGCATGCTGATGTCTGCAGTTCGATGT 1083
consensus_9559#2 AAGATTGAGCGTTGG-GCAATTGTTAATTTCTCTGCTCGGTG-TGACATGAGCCGGATCT 626
* * **** *** * * ** **** * ** ** * ** *** *
consensus_9559#0 TCTTTTGTTGAGGTGGTGTTAGTCAGCTAGTGTGCAGCAGGGCTGATCCTTCTTTTTTTT 1308
consensus_9559#1 C--TTTGTTGAGGTGGTGGTAGT-AACTAGTGTGCAGCAGGGCTTGATCCTCTTTTTTTT 1140
consensus_9559#2 C-------AAGAGACCTGATAAACTGTGGACGAACTAAAGGCATTGGCCATG-------- 671
* ** ** * * *** * * *
consensus_9559#0 TTGAAGGAACCAAATACGGAGTACTTGTTAGGCACTTTTGTAGTACTC--TAGATTGATA 1366
consensus_9559#1 T--GAAGGACCAAT--CCGAGTCCTTGT-AGGCACTTTTGTAGTACTC--TAGATTGATA 1193
consensus_9559#2 ---GAAGAAGAAA------AACCTTCATGAGATGGGTAT-TATTACTCAATGCATTGTTC 721
* * * ** * * * ** * * ** ***** * **** *
consensus_9559#0 CTATGAGATACATCTAGGTTGGGTAGGGAGCATTTTTTTTTAGATGATATAGTGCTCCTA 1426
consensus_9559#1 CTATGAGATACATATAGGTTGGGTAGGGAGCATTTTTTTTTAGATGATATAGTGCTCCTA 1253
consensus_9559#2 CTA------GTGT-TAAGATGAATGATCAGTACT---------ATACCAATGTTCTTCTG 765
*** * ** * ** * ** * * ** * ** ** **
consensus_9559#0 ATGATATAGTTCTGTTAGTGCTCAGCTATTAGGAAGTAAAGGCTTACCCTTGATGGTAGG 1486
consensus_9559#1 ATGATATAGTTCTGTTAGTGCTCAGCTATTAGGAAGTAAAGGCTTACCCTTGATGGTAGG 1313
consensus_9559#2 AAAATCAA----TGCTAA-GCTTGG-TGGAATGAACTCCAAGCTTTCATTGGAGCATCGA 819
* ** * ** ** *** * * * *** * * **** * * ** * *
consensus_9559#0 TTTATGAATTCAAGACGCTAACTTTGCGCCATATCTAATTGTCAACCAGTTA-------- 1538
consensus_9559#1 TTTATGAATTCAAGACGCTAACTTTGCGCCATATCTAATTGTCAACCAGTTAAACAGATG 1373
consensus_9559#2 CATAATGATTCCCATTGTCAATCAAACACC-CAC-------------------------- 852
** **** * ** * ** *
consensus_9559#0 --CCAAAAAAAAAAGA 1552
consensus_9559#1 ATTCGCAAAAAAAAAA 1389
consensus_9559#2 ----------------
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||