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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 956 cluster # 956       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_956#0 length = 971 sequences # 2  

consensusID : consensus_956#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 971
fasta sequence
                              [TGTTGCTGGCCATGGCGTCGTCGCGGAGGCGGACGCTGCTCAAGGTCATCGTCCTCGGCGACAGCGGGGTGGGGAAGACGTCCCTGATGAACCAATACGTGAACAAGAAGTTTAGCCAGCAGTACAAGGCGACGATCGGCGCCGATTTCGTCACCAAGGAGGTTCTCATTGAAGACAGGCTTGTCACCTTGCAGATCTGGGACACGGCAGGACAGGAGAGGTTTCAGAGTCTCGGTGTGGCGTTCTACAGAGGTGCAGATTGCTGTATGCTAGTCTACGATGTCAATGCTAAAAGATCTTTCAATGCACTCAACACCTGGCATGATGAGTTCCTCACCCAAGCTAGCCCATCAGATCCCAAACATTTTCCCTTCATATTACTCGGCAACAAGATTGACATAGATGCCGGAAACAGACGTGCCATCCCTGAGAAGAAAGCAAAAGAGTGGTGCGTCTCCAAAGGCAACATTCCGTATTTCGAAACCTCTGCGAAAGACGACTACAATGTTGACAGTGCTTTTCTGTGCATTGCCAAGCTTGCTCTGGAGCATGAGCATGATCAGGACATCTACTTCAAGACTGTTGCACAACCAGCCCCTGATACTGAACATACCAGCGGATGTGCTTGCTAGCACTTTGGATGCTTTTGTTCATTGGCTGAGAATGAAATTATACAATTATAAGTTGTTATGGACTCACAGTGTACAATAAGCTCGCATAAGAAACTGTTACTCGCTTGTGTATCCATTTTTTTAACCTAGGCTGTGTTTAGATCCAAAGTTTGGATCCAAACTTCAGTCCTTTTCCATCACATCAACCTGTCATTCACACATAACTTTTCAGTCACATCATCTTCAATTTCAACCAAAATCTAAACTTTGCGCTGAACTAAATACAGCCTTAGATCCAAAGTTTGGATCCAAACTTAGTCCTTTTCCGATACATCAATCTGTCATACACACACAACTTTT]

[+] EMBL AK105140             [TGTTGCTGGCCATGGCGTCGTCGCGGAGGCGGACGCTGCTCAAGGTCATCGTCCTCGGCGACAGCGGGGTGGGGAAGACGTCCCTGATGAACCAATACGTGAACAAGAAGTTTAGCCAGCAGTACAAGGCGACGATCGGCGCCGATTTCGTCACCAAGGAGGTTCTCATTGAAGACAGGCTTGTCACCTTGCAGATCTGGGACACGGCAGGACAGGAGAGGTTTCAGAGTCTCGGTGTGGCGTTCTACAGAGGTGCAGATTGCTGTATGCTAGTCTACGATGTCAATGCTAAAAGATCTTTCAATGCACTCAACACCTGGCATGATGAGTTCCTCACCCAAGCTAGCCCATCAGATCCCAAACATTTTCCCTTCATATTACTCGGCAACAAGATTGACATAGATGCCGGAAACAGACGTGCCATCCCTGAGAAGAAAGCAAAAGAGTGGTGCGTCTCCAAAGGCAACATTCCGTATTTCGAAACCTCTGCGAAAGACGACTACAATGTTGACAGTGCTTTTCTGTGCATTGCCAAGCTTGCTCTGGAGCATGAGCATGATCAGGACATCTACTTCAAGACTGTTGCACAACCAGCCCCTGATACTGAACATACCAGCGGATGTGCTTGCTAGCACTTTGGATGCTTTTGTTCATTGGCTGAGAATGAAATTATACAATTATAAGTTGTTATGGACTCACAGTGTACAATAAGCTCGCATAAGAAACTGTTACTCGCTTGTGTATCCATTTTTTTAACCTAGGCTGTGTTTAGATCCAAAGTTTGGATCCAAACTTCAGTCCTTTTCCATCACATCAACCTG                                                                                                                                                      ]
[+] EMBL D42392               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 gtgttTAGGCTGTGTTTAGATTCAAAGTTTGGATCCAAACTTCAGTCCTTTTCCATCACATCAACCTGTCATTCACACATAACTTTTCAGTCACATCATCTTCAATTTCAACCAAAATCTAAACTTTGCGCTGAACTAAATACAGCCTTAGATCCAAAGTTTGGATCCAAACTTAGTCCTTTTCCGATACATCAATCTGTCATACACACACAACTTTT]


>consensus_956#0 TGTTGCTGGCCATGGCGTCGTCGCGGAGGCGGACGCTGCTCAAGGTCATCGTCCTCGGCG ACAGCGGGGTGGGGAAGACGTCCCTGATGAACCAATACGTGAACAAGAAGTTTAGCCAGC AGTACAAGGCGACGATCGGCGCCGATTTCGTCACCAAGGAGGTTCTCATTGAAGACAGGC TTGTCACCTTGCAGATCTGGGACACGGCAGGACAGGAGAGGTTTCAGAGTCTCGGTGTGG CGTTCTACAGAGGTGCAGATTGCTGTATGCTAGTCTACGATGTCAATGCTAAAAGATCTT TCAATGCACTCAACACCTGGCATGATGAGTTCCTCACCCAAGCTAGCCCATCAGATCCCA AACATTTTCCCTTCATATTACTCGGCAACAAGATTGACATAGATGCCGGAAACAGACGTG CCATCCCTGAGAAGAAAGCAAAAGAGTGGTGCGTCTCCAAAGGCAACATTCCGTATTTCG AAACCTCTGCGAAAGACGACTACAATGTTGACAGTGCTTTTCTGTGCATTGCCAAGCTTG CTCTGGAGCATGAGCATGATCAGGACATCTACTTCAAGACTGTTGCACAACCAGCCCCTG ATACTGAACATACCAGCGGATGTGCTTGCTAGCACTTTGGATGCTTTTGTTCATTGGCTG AGAATGAAATTATACAATTATAAGTTGTTATGGACTCACAGTGTACAATAAGCTCGCATA AGAAACTGTTACTCGCTTGTGTATCCATTTTTTTAACCTAGGCTGTGTTTAGATCCAAAG TTTGGATCCAAACTTCAGTCCTTTTCCATCACATCAACCTGTCATTCACACATAACTTTT CAGTCACATCATCTTCAATTTCAACCAAAATCTAAACTTTGCGCTGAACTAAATACAGCC TTAGATCCAAAGTTTGGATCCAAACTTAGTCCTTTTCCGATACATCAATCTGTCATACAC ACACAACTTTT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)