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Oryza sativa
cluster # 9568 cluster # 9568       Sequences # 6       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9568#0 length = 1763 sequences # 4  
consensus_9568#1 length = 606 sequences # 1  
consensus_9568#2 length = 378 sequences # 1  

consensusID : consensus_9568#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1763
fasta sequence
                              [TATTGTTGGGCCACCAACCCACAGCTTACATTGCCTTGTAGACTAGTACTAGTATAAATGAATGGGATATACACGTAGTAATAATCCAATCCAATCCAGTAATATCGCAAATTAAGCAGCAGGTGCAGGAGGATGTCGTCGGCGGCGGCGGTGGTGCGCGTGGTGTCGAGGCGCACCGTGAAGCCGGCAGCGCCTCGGCCGCGGGAGAGCATCCCCCTCACCTCCTGGGACCTCTCCATGCTCTCCGCCGATTACATCCAGAAAGGCCTCGTCTTCCCCCCGCCGCCGCCTTGCCTCCTAGTCGTCGACCACCTCGCCGCCGCCCTCTCCACCACGCTCAACACCTACTACCCCGTCGCCGGCCGCTTCGTCACCCACAACCACCCGGAACCTGAAGGCGGCTGCTCCGTCTCCATCGACTGCGACGGCCAGGGCGTCCAGATCGTCCACGCCGTCGCCGATGCCGTCACTGTCGCCGACCTCCTCCCTCCCGACGCCCACGTCCCGCCCCTCCTCCACTCCTTCTTCCCGCTCGGGGACGCCGTCAACTACGACGGCCACCATCTCCCCCTCTTCGTCGTCCAGGTCACCCACCTCGTTGACGGCGTCTTCCTCTCCTTCGTCTACAACCACGCGCTCTCCGATGGAACCGCATTCTGGGACTTCCTCAATGCGTGGGTCGAGATTGCGCGCGCCAGCTGCCTCGCCGCGCCCACCTCGCCCCCACCCTTGTTCAACCGTTGGTCTCCCTCTCCCGGAGACGGAGCCCCGGTCGTGCTGCCGTACGCCGACCTGTCGGAGCTGATCGAGAGGCTGCAGCCGCCGCTGCTGTGCGAGCGGATGCTACACTTCTCATCGGAGTCGCTGGTGGCGCTCAAGGAGCGGGCTCGCCAAGAGCTCCTGGCGGCCGGGGACACGGCGGGCGCGGCCGCGCTGACGAGGTTCCAGGCGCTGAGCTCGCTGCTGTGGAGGTGCATCACCCGCGCCAGGCGGCTGCCGGCGGAGCAACAGACCATGTGCCGCGCGGCCATCAACAACCGCGGGCGCCTCCAGCCGGCGCTGCCCAGGGAGTACTTCGGCAACAGCATCTACGCCATCAGCACGGAGAAGGTGCAGGCGTCGGAGCTGGTGGAGCGCGGGCACGGGTGGGCGGCGGCGGCGGTGGGGCGGGCGGTGGCGGCGCACACGGACGCGGACATCAGGGCGCGGGTGGCGGCGTGGGAGGTGAAGCCGATAATATACACGGCGAGGTACTTCGACCCGTCGGGGGTGATGATGGGGAGCTCGCCGCGGTTCGACATGTACGGCTGCGACTTTGGGTGGGGGAAGGCGCTGGCGGCGCGGAGCGGCAAGGCCAACAAGATGGACGGCAAGGCGTCGCTGTACCCGGGGCGGGAGGGCGGAGGAAGCATAGATGCGGAGGTGGTGCTCACTCCACACCACATGGCGGCGCTGGACGACGACCACGAGCTGTGGGCCGCCGTCACGCCGCTACTGCTCAACAACAACAAACCTTGAAGCTTTTCTTCCTCCTCCTTCCTGCCTTAATTAGTGCCTGCCTTTTCTTCCAAAATTAAATAATAAAATAAGAAGCTTTAAGCTTTTCCTTCCGATGATATTGTTTCCCGTCTCTGTCTCAGGTTTTGGTTTCCTTAGTGTTTGTTTGCTTGCTTGATTGATAATCCAGCATCAACAAACAAAGTAAAGATATATCTATTCATGTCATGACATCATTCCAGTGAGGATGCAATGCACAACACCTT]

[-] EMBL AK110874             [TATTGTTGGGCCACCAACCCACAGCTTACATTGCCTTGTAGACTAGTACTAGTATAAATGAATGGGATATACACGTAGTAATAATCCAATCCAATCCAGTAATATCGCAAATTAAGCAGCAGGTGCAGGAGGATGTCGTCGGCGGCGGCGGTGGTGCGCGTGGTGTCGAGGCGCACCGTGAAGCCGGCAGCGCCTCGGCCGCGGGAGAGCATCCCCCTCACCTCCTGGGACCTCTCCATGCTCTCCGCCGATTACATCCAGAAAGGCCTCGTCTTCCCCCCGCCGCCGCCTTGCCTCCTAGTCGTCGACCACCTCGCCGCCGCCCTCTCCACCACGCTCAACACCTACTACCCCGTCGCCGGCCGCTTCGTCACCCACAACCACCCGGAACCTGAAGGCGGCTGCTCCGTCTCCATCGACTGCGACGGCCAGGGCGTCCAGATCGTCCACGCCGTCGCCGATGCCGTCACTGTCGCCGACCTCCTCCCTCCCGACGCCCACGTCCCGCCCCTCCTCCACTCCTTCTTCCCGCTCGGGGACGCCGTCAACTACGACGGCCACCATCTCCCCCTCTTCGTCGTCCAGGTCACCCACCTCGTTGACGGCGTCTTCCTCTCCTTCGTCTACAACCACGCGCTCTCCGATGGAACCGCATTCTGGGACTTCCTCAATGCGTGGGTCGAGATTGCGCGCGCTAGCTGCCTCGCCGCGCCCACCTCGCCCCCACCCTTGTTCAACCGTTGGTCTCCCTCTCCCGGAGACGGAGCCCCGGTCGTGCTGCCGTACGCCGACCTGTCGGAGCTGATCGAGAGGCTGCAGCCGCCGCTGCTGTGCGAGCGGATGCTACACTTCTCATCGGAGTCGCTGGTGGCGCTCAAGGAGCGGGCTCGCCAAGAGCTCCTGGCGGCCGGGGACACGGCGGGCGCGGCCGCGCTGACGAGGTTCCAGGCGCTGAGCTCGCTGCTGTGGAGGTGCATCACCCGCGCCAGGCGGCTGCCGGCGGAGCAACAGACCATGTGCCGCGCGGCCATCAACAACCGCGGGCGCCTCCAGCCGGCGCTGCCCAGGGAGTACTTCGGCAACAGCATCTACGCCATCAGCACGGAGAAGGTGCAGGCGTCGGAGCTGGTGGAGCGCGGGCACGGGTGGGCGGCGGCGGCGGTGGGGCGGGCGGTGGCGGCGCACACGGACGCGGACATCAGGGCGCGGGTGGCGGCGTGGGAGGTGAAGCCGATAATATACACGGCGAGGTACTTCGACCCGTCGGGGGTGATGATGGGGAGCTCGCCGCGGTTCGACATGTACGGCTGCGACTTTGGGTGGGGGAAGGCGCTGGCGGCGCGGAGCGGCAAGGCCAACAAGATGGACGGCAAGGCGTCGCTGTACCCGGGGCGGGAGGGCGGAGGAAGCATAGATGCGGAGGTGGTGCTCACTCCACACCACATGGCGGCGCTGGACGACGACCACGAGCTGTGGGCCGCCGTCACGCCGCTACTGCTCAACAACA                                                                                                                                                                                                                                                                ]
[+] EMBL AK103757             [                                                                                                         CGCAAATTAAGCAGCAGGTGCAGGAGGATGTCGTCGGCGGCGGCGGTGGTGCGCGTGGTGTCGAGGCGCACCGTGAAGCCGGCAGCGCCTCGGCCGCGGGAGAGCATCCCCCTCACCTCCTGGGACCTCTCCATGCTCTCCGCCGATTACATCCAGAAAGGCCTCGTCTTCCCCCCGCCGCCGCCTTGCCTCCTAGTCGTCGACCACCTCGCCGCCGCCCTCTCCACCACGCTCAACACCTACTACCCCGTCGCCGGCCGCTTCGTCACCCACAACCACCCGGAACCTGAAGGCGGCTGCTCCGTCTCCATCGACTGCGACGGCCAGGGCGTCCAGATCGTCCACGCCGTCGCCGATGCCGTCACTGTCGCCGACCTCCTCCCTCCCGACGCCCACGTCCCGCCCCTCCTCCACTCCTTCTTCCCGCTCGGGGACGCCGTCAACTACGACGGCCACCATCTCCCCCTCTTCGTCGTCCAGGTCACCCACCTCGTTGACGGCGTCTTCCTCTCCTTCGTCTACAACCACGCGCTCTCCGATGGAACCGCATTCTGGGACTTCCTCAATGCGTGGGTCGAGATTGCGCGCGCCAGCTGCCTCGCCGCGCCCACCTCGCCCCCACCCTTGTTCAACCGTTGGTCTCCCTCTCCCGGAGACGGAGCCCCGGTCGTGCTGCCGTACGCCGACCTGTCGGAGCTGATCGAGAGGCTGCAGCCGCCGCTGCTGTGCGAGCGGATGCTACACTTCTCATCGGAGTCGCTGGTGGCGCTCAAGGAGCGGGCTCGCCAAGAGCTCCTGGCGGCCGGGGACACGGCGGGCGCGGCCGCGCTGACGAGGTTCCAGGCGCTGAGCTCGCTGCTGTGGAGGTGCATCACCCGCGCCAGGCGGCTGCCGGCGGAGCAACAGACCATGTGCCGCGCGGCCATCAACAACCGCGGGCGCCTCCAGCCGGCGCTGCCCAGGGAGTACTTCGGCAACAGCATCTACGCCATCAGCACGGAGAAGGTGCAGGCGTCGGAGCTGGTGGAGCGCGGGCACGGGTGGGCGGCGGCGGCGGTGGGGCGGGCGGTGGCGGCGCACACGGACGCGGACATCAGGGCGCGGGTGGCGGCGTGGGAGGTGAAGCCGATAATATACACGGCGAGGTACTTCGACCCGTCGGGGGTGATGATGGGGAGCTCGCCGCGGTTCGACATGTACGGCTGCGACTTTGGGTGGGGGAAGGCGCTGGCGGCGCGGAGCGGCAAGGCCAACAAGATGGACGGCAAGGCGTCGCTGTACCCGGGGCGGGAGGGCGGAGGAAGCATAGATGCGGAGGTGGTGCTCACTCCACACCACATGGCGGCGCTGGACGACGACCACGAGCTGTGGGCCGCCGTCACGCCGCTACTGCTCAACAACAACAAACCTTGAAGCTTTTCTTCCTCCTCCTTCCTGCCTTAATTAGTGCCTGCCTTTTCTTCCAAAATTAAATAATAAAATAAGAAGCTTTAAGCTTTTCCTTCCGATGATATTGTTTCCCGTCTCTGTCTCAGGTTTTGGTTTCCTTAGTGTTTGTTTGCTTGCTTGATTGATAATCCAGCATCAACAAACAAAGTAAAGATATATCTATTCATGTCATGACATCATTCCAGTGAGGATGCAATGCACAACACCTT]
[+] EMBL CB649275             [                                                                                                           CAAATTAAGCAGCAGGTGCAGGAGGATGTCGTCGGCGGCGGCGGTGGTGCGCGTGGTGTCGAGGCGCACCGTGAAGCCGGCAGCGCCTCGGCCGCGGGAGAGCATCCCCCTCACCTCCTGGGACCTCTCCATGCTCTCCGCCGATTACATCCAGAAAGGCCTCGTCTTCCCCCCGCCGCCGCCTTGCCTCCTAGTCGTCGACCACCTCGCCGCCGCCCTCTCCACCACGCTCAACACCTACTACCCCGTCGCCGGCCGCTTCGTCACCCACAACCACCCGGAACCTGAAGGCGGCTGCTCCGTCTCCATCGACTGCGACGGCCAGGGCGTCCAGATCGTCCACGCCGTCGCCGATGCCGTCACTGTCGCCGACCTCCTCCCTCCCGACGCCCACGTCCCGCCCCTCCTCCACTCCTTCTTCCCGCTCGGGGACGCCGTCAACTACGACGGCCACCATCTCCCCCTCTTCGTCGTCCAGGTCACCCACCTCGTTGACGGCGTCTTCCTCTCCTTCGTCTACAACCACGCGCTCTCCGATGGAACCGCATTCTGGGACTTCCTCAATGCGTGGGTCGAGATTGCGCGCGCCAGCTGCCTCGCCGCGCCCACCTCGCCCCCACCCTTGTTCAACCGTTGGTCTCCCTCTCCCGGAGACGGAGCCCCGGTCGTGCTGCCGTACGCCGACCTGTCGGAGCTGATCGAGAGGCTGCAGCCGCCGCTGCTGTGCGAGCGGATGCTACACTTCTCATCGGAGTCGCTGGTGGCGCTCAAGGAGCGGGCTCGCCTAGAGCTCCTGGCGGCCGGGGACACGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL CB649276             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TGGCGCTCAAGGAGCGGGCTCGCCAAGAGCTCCTGGCGGCCGGGGACACGGCGGGCGCGGCCGCGCTGACGAGGTTCCAGGCGCTGAGCTCGCTGCTGTGGAGGTGCATCACCCGCGCCAGGCGGCTGCCGGCGGAGCAACAGACCATGTGCCGCGCGGCCATCAACAACCGCGGGCGCCTCCAGCCGGCGCTGCCCAGGGAGTACTTCGGCAACAGCATCTACGCCATCAGCACGGAGAAGGTGCAGGCGTCGGAGCTGGTGGAGCGCGGGCACGGGTGGGCGGCGGCGGCGGTGGGGCGGGCGGTGGCGGCGCACACGGACGCGGACATCAGGGCGCGGGTGGCGGCGTGGGAGGTGAAGCCGATAATATACACGGCGAGGTACTTCGACCCGTCGGGGGTGATGATGGGGAGCTCGCCGCGGTTCGACATGTACGGCTGCGACTTTGGGTGGGGGAAGGCGCTGGCGGCGCGGAGCGGCAAGGCCAACAAGATGGACGGCAAGGCGTCGCTGTACCCGGGGCGGGAGGGCGGAGGAAGCATAGATGCGGAGGTGGTGCTCACTCCACACCACATGGCGGCGCTGGACGACGACCACGAGCTGTGGGCCGCCGTCACGCCGCTACTGCTCAACAACAACAAACCTTGAAGCTTTTCTTCCTCCTCCTTCCTGCCTTAATTAGTGCCTGCCTTTTCTTCCAAAATTAAATAATAAAATAAGAAGCTTTAAGC                                                                                                                                                                  ]


>consensus_9568#0 TATTGTTGGGCCACCAACCCACAGCTTACATTGCCTTGTAGACTAGTACTAGTATAAATG AATGGGATATACACGTAGTAATAATCCAATCCAATCCAGTAATATCGCAAATTAAGCAGC AGGTGCAGGAGGATGTCGTCGGCGGCGGCGGTGGTGCGCGTGGTGTCGAGGCGCACCGTG AAGCCGGCAGCGCCTCGGCCGCGGGAGAGCATCCCCCTCACCTCCTGGGACCTCTCCATG CTCTCCGCCGATTACATCCAGAAAGGCCTCGTCTTCCCCCCGCCGCCGCCTTGCCTCCTA GTCGTCGACCACCTCGCCGCCGCCCTCTCCACCACGCTCAACACCTACTACCCCGTCGCC GGCCGCTTCGTCACCCACAACCACCCGGAACCTGAAGGCGGCTGCTCCGTCTCCATCGAC TGCGACGGCCAGGGCGTCCAGATCGTCCACGCCGTCGCCGATGCCGTCACTGTCGCCGAC CTCCTCCCTCCCGACGCCCACGTCCCGCCCCTCCTCCACTCCTTCTTCCCGCTCGGGGAC GCCGTCAACTACGACGGCCACCATCTCCCCCTCTTCGTCGTCCAGGTCACCCACCTCGTT GACGGCGTCTTCCTCTCCTTCGTCTACAACCACGCGCTCTCCGATGGAACCGCATTCTGG GACTTCCTCAATGCGTGGGTCGAGATTGCGCGCGCCAGCTGCCTCGCCGCGCCCACCTCG CCCCCACCCTTGTTCAACCGTTGGTCTCCCTCTCCCGGAGACGGAGCCCCGGTCGTGCTG CCGTACGCCGACCTGTCGGAGCTGATCGAGAGGCTGCAGCCGCCGCTGCTGTGCGAGCGG ATGCTACACTTCTCATCGGAGTCGCTGGTGGCGCTCAAGGAGCGGGCTCGCCAAGAGCTC CTGGCGGCCGGGGACACGGCGGGCGCGGCCGCGCTGACGAGGTTCCAGGCGCTGAGCTCG CTGCTGTGGAGGTGCATCACCCGCGCCAGGCGGCTGCCGGCGGAGCAACAGACCATGTGC CGCGCGGCCATCAACAACCGCGGGCGCCTCCAGCCGGCGCTGCCCAGGGAGTACTTCGGC AACAGCATCTACGCCATCAGCACGGAGAAGGTGCAGGCGTCGGAGCTGGTGGAGCGCGGG CACGGGTGGGCGGCGGCGGCGGTGGGGCGGGCGGTGGCGGCGCACACGGACGCGGACATC AGGGCGCGGGTGGCGGCGTGGGAGGTGAAGCCGATAATATACACGGCGAGGTACTTCGAC CCGTCGGGGGTGATGATGGGGAGCTCGCCGCGGTTCGACATGTACGGCTGCGACTTTGGG TGGGGGAAGGCGCTGGCGGCGCGGAGCGGCAAGGCCAACAAGATGGACGGCAAGGCGTCG CTGTACCCGGGGCGGGAGGGCGGAGGAAGCATAGATGCGGAGGTGGTGCTCACTCCACAC CACATGGCGGCGCTGGACGACGACCACGAGCTGTGGGCCGCCGTCACGCCGCTACTGCTC AACAACAACAAACCTTGAAGCTTTTCTTCCTCCTCCTTCCTGCCTTAATTAGTGCCTGCC TTTTCTTCCAAAATTAAATAATAAAATAAGAAGCTTTAAGCTTTTCCTTCCGATGATATT GTTTCCCGTCTCTGTCTCAGGTTTTGGTTTCCTTAGTGTTTGTTTGCTTGCTTGATTGAT AATCCAGCATCAACAAACAAAGTAAAGATATATCTATTCATGTCATGACATCATTCCAGT GAGGATGCAATGCACAACACCTT



consensusID : consensus_9568#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 606
fasta sequence
                              [AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGTGATATCGCGAATTATGCAGCAGGTGCAGGAGGATGTCGTCGGCGGCGGCGGTGGTGCGCGTGGTGTCGAGGCGCACCGTGAAGCCGGCAGCGCCTCGGCCGCGGGAGAGCATCCCCCTCACCTCCTGGGACCTCTCCATGCTCTCCGCCGATTACATCCAGAAAGGCCTCGTCTTCCCCCCGCCGCCGCCTTGCCTCCTAGTCGTCGACCACCTCGCCGCCGCCCTCTCCACCACGCTCAACACCTACTACCCCGTCGCCGGCCGCTTCGTCACCCACAACCACCCGGAACCTGAAGGCGGCTGCTCCGTCTCCATCGACTGCGACGGCCAGGGCGTCCAGATCGTCCACGCCGTCTCCGATGCCGTCCCTGTCGCCGACCTCCTCCCTCCCGACGCCCACGTCCCGCCCCTCCTCCACTCCTTCTTCCCGCTCGGGGGAGCCGTCTACTACTATGGTCACCGTCTCGCCCTCTTTCTCGTCCAGGTCACCACCTCGTTGACCGCGCCTTCCTCTCCTTCGCCTACAACCCGCGGCTCTCCGATGGGACCCCGTTCTTGGGCCTCCTCCGTGC]

[+] EMBL CA758860             [AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGTGATATCGCGAATTATGCAGCAGGTGCAGGAGGATGTCGTCGGCGGCGGCGGTGGTGCGCGTGGTGTCGAGGCGCACCGTGAAGCCGGCAGCGCCTCGGCCGCGGGAGAGCATCCCCCTCACCTCCTGGGACCTCTCCATGCTCTCCGCCGATTACATCCAGAAAGGCCTCGTCTTCCCCCCGCCGCCGCCTTGCCTCCTAGTCGTCGACCACCTCGCCGCCGCCCTCTCCACCACGCTCAACACCTACTACCCCGTCGCCGGCCGCTTCGTCACCCACAACCACCCGGAACCTGAAGGCGGCTGCTCCGTCTCCATCGACTGCGACGGCCAGGGCGTCCAGATCGTCCACGCCGTCTCCGATGCCGTCCCTGTCGCCGACCTCCTCCCTCCCGACGCCCACGTCCCGCCCCTCCTCCACTCCTTCTTCCCGCTCGGGGGAGCCGTCTACTACTATGGTCACCGTCTCGCCCTCTTTCTCGTCCAGGTCACCACCTCGTTGACCGCGCCTTCCTCTCCTTCGCCTACAACCCGCGGCTCTCCGATGGGACCCCGTTCTTGGGCCTCCTCCGTGC]


>consensus_9568#1 AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGTGATATCGCGAATTATGCAGCAGGTGCA GGAGGATGTCGTCGGCGGCGGCGGTGGTGCGCGTGGTGTCGAGGCGCACCGTGAAGCCGG CAGCGCCTCGGCCGCGGGAGAGCATCCCCCTCACCTCCTGGGACCTCTCCATGCTCTCCG CCGATTACATCCAGAAAGGCCTCGTCTTCCCCCCGCCGCCGCCTTGCCTCCTAGTCGTCG ACCACCTCGCCGCCGCCCTCTCCACCACGCTCAACACCTACTACCCCGTCGCCGGCCGCT TCGTCACCCACAACCACCCGGAACCTGAAGGCGGCTGCTCCGTCTCCATCGACTGCGACG GCCAGGGCGTCCAGATCGTCCACGCCGTCTCCGATGCCGTCCCTGTCGCCGACCTCCTCC CTCCCGACGCCCACGTCCCGCCCCTCCTCCACTCCTTCTTCCCGCTCGGGGGAGCCGTCT ACTACTATGGTCACCGTCTCGCCCTCTTTCTCGTCCAGGTCACCACCTCGTTGACCGCGC CTTCCTCTCCTTCGCCTACAACCCGCGGCTCTCCGATGGGACCCCGTTCTTGGGCCTCCT CCGTGC



consensusID : consensus_9568#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 378
fasta sequence
                              [TTAACTTTCGGAACCCCGTCCGGGGGTTGATTGATTGGGGAAGCTTCNGCCGCGGTTCCGACATTGTACGGCTGCGACTTTGGGTGGGGGAAGGCGCTGGCGGCNCGGAGCGCAAGGCCAACAAGATGGACGGCAAGGCGTCGCTGTACCCGGGGCGGGAGGGCGGAGGAAGCATAGATGCGGAGGTGGTGCTCACTCCACACCACATGGCGGCGCTGGACGACGACCACGAGCTGTGGGCCGCCGTCACGCCGCTACTGCTCAACAACAACAAACCTTGAAGCTTTTCTTCCTCCTCCTTCCTGCCTTAATTAGTGCCTGCCTTTTCTTCCAAAATTAAATAATAAAATAAGAAGCTTTAAGCTTTTCCTTCCAAAA]

[+] EMBL AU096989             [TTAACTTTCGGAACCCCGTCCGGGGGTTGATTGATTGGGGAAGCTTCNGCCGCGGTTCCGACATTGTACGGCTGCGACTTTGGGTGGGGGAAGGCGCTGGCGGCNCGGAGCGCAAGGCCAACAAGATGGACGGCAAGGCGTCGCTGTACCCGGGGCGGGAGGGCGGAGGAAGCATAGATGCGGAGGTGGTGCTCACTCCACACCACATGGCGGCGCTGGACGACGACCACGAGCTGTGGGCCGCCGTCACGCCGCTACTGCTCAACAACAACAAACCTTGAAGCTTTTCTTCCTCCTCCTTCCTGCCTTAATTAGTGCCTGCCTTTTCTTCCAAAATTAAATAATAAAATAAGAAGCTTTAAGCTTTTCCTTCCAAAA]


>consensus_9568#2 TTAACTTTCGGAACCCCGTCCGGGGGTTGATTGATTGGGGAAGCTTCNGCCGCGGTTCCG ACATTGTACGGCTGCGACTTTGGGTGGGGGAAGGCGCTGGCGGCNCGGAGCGCAAGGCCA ACAAGATGGACGGCAAGGCGTCGCTGTACCCGGGGCGGGAGGGCGGAGGAAGCATAGATG CGGAGGTGGTGCTCACTCCACACCACATGGCGGCGCTGGACGACGACCACGAGCTGTGGG CCGCCGTCACGCCGCTACTGCTCAACAACAACAAACCTTGAAGCTTTTCTTCCTCCTCCT TCCTGCCTTAATTAGTGCCTGCCTTTTCTTCCAAAATTAAATAATAAAATAAGAAGCTTT AAGCTTTTCCTTCCAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9568#0      TATTGTTGGGCCACCAACCCACAGCTTACATTGCCTTGTAGACTAGTACTAGTATAAATG 60
consensus_9568#2      ------------------------------------------------------------
consensus_9568#1      ------------------------------------------------------------
                                                                                  

consensus_9568#0      AATGGGATATACACGTAGTAATAATCCAATCCAATCCAGTAATATCGCAAATTAAGCAGC 120
consensus_9568#2      ------------------------------------------------------------
consensus_9568#1      ------------------------------------------------------------
                                                                                  

consensus_9568#0      AGGTGCAGGAGGATGTCGTCGGCGGCGGCGGTGGTGCGCGTGGTGTCGAGGCGCACCGTG 180
consensus_9568#2      ------------------------------------------------------------
consensus_9568#1      ------------------------------------------------------------
                                                                                  

consensus_9568#0      AAGCCGGCAGCGCCTCGGCCGCGGGAGAGCATCCCCCTCACCTCCTGGGACCTCTCCATG 240
consensus_9568#2      ------------------------------------------------------------
consensus_9568#1      ------------------------------------------------------------
                                                                                  

consensus_9568#0      CTCTCCGCCGATTACATCCAGAAAGGCCTCGTCTTCCCCCCGCCGCCGCCTTGCCTCCTA 300
consensus_9568#2      ------------------------------------------------------------
consensus_9568#1      ------------------------------------------------------------
                                                                                  

consensus_9568#0      GTCGTCGACCACCTCGCCGCCGCCCTCTCCACCACGCTCAACACCTACTACCCCGTCGCC 360
consensus_9568#2      ------------------------------------------------------------
consensus_9568#1      ------------------------------------------------------------
                                                                                  

consensus_9568#0      GGCCGCTTCGTCACCCACAACCACCCGGAACCTGAAGGCGGCTGCTCCGTCTCCATCGAC 420
consensus_9568#2      ------------------------------------------------------------
consensus_9568#1      ------------------------------------------------------------
                                                                                  

consensus_9568#0      TGCGACGGCCAGGGCGTCCAGATCGTCCACGCCGTCGCCGATGCCGTCACTGTCGCCGAC 480
consensus_9568#2      ------------------------------------------------------------
consensus_9568#1      ------------------------------------------------------------
                                                                                  

consensus_9568#0      CTCCTCCCTCCCGACGCCCACGTCCCGCCCCTCCTCCACTCCTTCTTCCCGCTCGGGGAC 540
consensus_9568#2      ------------------------------------------------------------
consensus_9568#1      ------------------------------------------------------------
                                                                                  

consensus_9568#0      GCCGTCAACTACGACGGCCACCATCTCCCCCTCTTCGTCGTCCAGGTCACCCACCTCGTT 600
consensus_9568#2      ------------------------------------------------------------
consensus_9568#1      ------------------------------------------------------------
                                                                                  

consensus_9568#0      GACGGCGTCTTCCTCTCCTTCGTCTACAACCACGCGCTCTCCGATGGAACCGCATTCTGG 660
consensus_9568#2      ------------------------------------------------------------
consensus_9568#1      ------------------------------------------------------------
                                                                                  

consensus_9568#0      GACTTCCTCAATGCGTGGGTCGAGATTGCGCGCGCCAGCTGCCTCGCCGCGCCCACCTCG 720
consensus_9568#2      ------------------------------------------------------------
consensus_9568#1      ------------------------------------------------------------
                                                                                  

consensus_9568#0      CCCCCACCCTTGTTCAACCGTTGGTCTCCCTCTCCCGGAGACGGAGCCCCGGTCGTGCTG 780
consensus_9568#2      ------------------------------------------------------------
consensus_9568#1      ------------------------------------------------------------
                                                                                  

consensus_9568#0      CCGTACGCCGACCTGTCGGAGCTGATCGAGAGGCTGCAGCCGCCGCTGCTGTGCGAGCGG 840
consensus_9568#2      ------------------------------------------------------------
consensus_9568#1      ------------------------------------------------------------
                                                                                  

consensus_9568#0      ATGCTACACTTCTCATCGGAGTCGCTGGTGGCGCTCAAGGAGCGGGCTCGCCAAGAGCTC 900
consensus_9568#2      ------------------------------------------------------------
consensus_9568#1      ------------------------------------------------------------
                                                                                  

consensus_9568#0      CTGGCGGCCGGGGACACGGCGGGCGCGGCCGCGCTGACGAGGTTCCAGGCGCTGAGCTCG 960
consensus_9568#2      ------------------------------------------------------------
consensus_9568#1      ------------------------------------------------------------
                                                                                  

consensus_9568#0      CTGCTGTGGAGGTGCATCACCCGCGCCAGGCGGCTGCCGGCGGAGCAACAGACCATGTGC 1020
consensus_9568#2      ------------------------------------------------------------
consensus_9568#1      ------------------------------------------------------------
                                                                                  

consensus_9568#0      CGCGCGGCCATCAACAACCGCGGGCGCCTCCAGCCGGCGCTGCCCAGGGAGTACTTCGGC 1080
consensus_9568#2      ------------------------------------------------------------
consensus_9568#1      ------------------------------------------------------------
                                                                                  

consensus_9568#0      AACAGCATCTACGCCATCAGCACGGAGAAGGTGCAGGCGTCGGAGCTGGTGGAGCGCGGG 1140
consensus_9568#2      ------------------------------------------------------------
consensus_9568#1      ----------AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGTGATATCGCGAATTATGC 50
                                                                                  

consensus_9568#0      CACGGGTGGGCGGCGGCGGCGGTGGGGCGGGCGGTGGCGGCGCACACGGACGCGGACATC 1200
consensus_9568#2      ------------------------------------------------------------
consensus_9568#1      AGCAGGTGCAGGAGGATGTCGTCGGCGGCGGCGGTGGTGCGCGTGGTGTCGAGGCGCACC 110
                                                                                  

consensus_9568#0      AGGGCGCGGGTGGCGGCGTGGGAGGTGAAGCCGATAATATACACGGCGAGGTACTTCGAC 1260
consensus_9568#2      ----------------------------------------TTAACTTTCGGAACCCCGTC 20
consensus_9568#1      GTGAAGCCGGCAGCGCCTCGGCCGCGGGAGAGCATCCCCCTCACCTCCTGGGACCTCTCC 170
                                                                *      ** **  *  *

consensus_9568#0      CCGTCGGGGGTGATGATGGGGAGCT--CGCCGCGGTTC-GACAT-GTACGGCTGCGACTT 1316
consensus_9568#2      CGGGGGTTGATTGATTGGGGAAGCTTCNGCCGCGGTTCCGACATTGTACGGCTGCGACTT 80
consensus_9568#1      ATGCTCTCCGCCGATTACATCCAGAAAGGCCTCGTCTTCCCCCCGCCGCCGCCTTGCCTC 230
                        *                         *** **  *    *      * **   * ** 

consensus_9568#0      TGGGTGGGGGAAGGCGCTGGCG--GCGCGGAGCGGCAAGGCCAACA------AGATGGAC 1368
consensus_9568#2      TGGGTGGGGGAAGGCGCTGGCG--GCNCGGAGCG-CAAGGCCAACA------AGATGGAC 131
consensus_9568#1      CTAGTCGTCGACCACCTCGCCGCCGCCCTCTCCACCACGCTCAACACCTACTACCCCGTC 290
                         ** *  **   *   * **  ** *    *  ** *  *****      *    * *

consensus_9568#0      GGCAAG-GCGTCGCTGT--------ACCCGGGGCGGGAGGGCGGAGGAAGCATAGATGCG 1419
consensus_9568#2      GGCAAG-GCGTCGCTGT--------ACCCGGGGCGGGAGGGCGGAGGAAGCATAGATGCG 182
consensus_9568#1      GCCGGCCGCTTCGTCACCCACAACCACCCGGAACCTGAAGGCGGCTGCTCCGTCTCCATC 350
                      * *    ** ***            ******  *  ** *****  *   * *       

consensus_9568#0      GAG-GTGGTGCTCACTCCACACCACATGGCGGCGCTGGACGACGACCACGAGC-TGTGGG 1477
consensus_9568#2      GAG-GTGGTGCTCACTCCACACCACATGGCGGCGCTGGACGACGACCACGAGC-TGTGGG 240
consensus_9568#1      GACTGCGACGGCCAGGGCGTCCAGATCGTCCACGCCGT-CTCCGATGCCGTCCCTGTCGC 409
                      **  * *  *  **   *   *     * *  *** *  *  ***   **  * *** * 

consensus_9568#0      CCGCCGTCACGCCGCTACTGCTCAACAACAACAAACCTTGAAGCTTTTCTTCCTCCTC-- 1535
consensus_9568#2      CCGCCGTCACGCCGCTACTGCTCAACAACAACAAACCTTGAAGCTTTTCTTCCTCCTC-- 298
consensus_9568#1      CGACCTCCTCCCTCCCGACGCCCACGTCCCGCCCCTCCTCCACTCCTTCTTCCCGCTCGG 469
                      *  **  * * *  *    ** **    *  *    * *  *    *******  ***  

consensus_9568#0      --------CTTCCTGCCTTAATTAGTGCCT-GCCTTTTCTTCCA---AAATTAAATAATA 1583
consensus_9568#2      --------CTTCCTGCCTTAATTAGTGCCT-GCCTTTTCTTCCA---AAATTAAATAATA 346
consensus_9568#1      GGGAGCCGTCTACTACTATGGTCACCGTCTCGCCCTCTTTCTCGTCCAGGTCACCACCTC 529
                                * ** *  *  * *  * ** *** * * *  *    *  * *     * 

consensus_9568#0      AAATAAGAAGCTTTAAGCTTTTCCTTCCGATGATATTGTTTCCCGTCTCTGTCTCAGGTT 1643
consensus_9568#2      AAATAAGAAGCTTTAAGCTTTTCCTTCCAAAA---------------------------- 378
consensus_9568#1      GTTGACCGCGCCTTCCTCTCCTTCGCCTACAACCCGCGGCTCTCCGATGGGACCCCGTTC 589
                          *    ** **   **  * *  *                                 

consensus_9568#0      TTGGTTTCCTTAGTGTTTGTTTGCTTGCTTGATTGATAATCCAGCATCAACAAACAAAGT 1703
consensus_9568#2      ------------------------------------------------------------
consensus_9568#1      TTGGGCCTCCTCCGTGC------------------------------------------- 606
                                                                                  

consensus_9568#0      AAAGATATATCTATTCATGTCATGACATCATTCCAGTGAGGATGCAATGCACAACACCTT 1763
consensus_9568#2      ------------------------------------------------------------
consensus_9568#1      ------------------------------------------------------------
                                                                                  




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)