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Oryza sativa
cluster # 958 cluster # 958       Sequences # 2       consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_958#0 length = 3014 sequences # 1  
 consensus_958#1 length = 1632 sequences # 1  
consensusID : consensus_958#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 3014
fasta sequence 
                              [TGTTCTATAGAGTGGACTTAAACTAATGTTGATATAGCTTATTACTTTTTATGCTCATTATCCATTTGGTAATGAAATTTGAATTGCATTTAATAATTGTTGGTCGGAAAATTCTATACAGCTTTAGAGACAAACTTTATTTTTTAACTATACATTAATAGTGATAACACATGTAGAATCTTTAAGTTTCTCCACGTTTGATTTTTCTATTGTCAACGAAAAAATCATAATAGGTTAAAGCTAAGGCTGTGTTTAGATCCAAAGTTTGGATCCAAACTTCAGTACTTTTCCATCACATCAACCTGTCATACACACACAACTTTTCAGTCACATCATCTCTAATTTCAACCAAAATCCAAACTTTGCGCTGGACTAAACACAGCCTAAGAAAGAAATTTTGGTTCTTCTCTGTACAAGAGAAGGCTAGTCACAGACACATCTCAAACTTAGTTACAAATTAAATATTTTGTCTTGCAGTTACATTCAACAAATTCAAAGGTGACGATGGGAGGTTCATGAATGGAATAGCTGATGAACCAAGGGGTTTATTAAGTTTATACAATGCAGCTTACCTCCTTGTTCATGATGAGCCAGAACTCGAAGAGGCAATCTCTTTTTCTAGGTACCATCTAAAATCAATGATGCAGGGCAATAACCTCAAACACCCTTTATCTGACCAAGTCAAGCGTGCCCTTAACACACCATTACCAAGGACATCCAAAAGAACAGAGACATTGCATTATCTTTCGGAGTATGGACAAGAGGAAGGGCATATGTCAATTCTTTTGGATCTTGCAAAGGTGGAATTTAACCTTCTGCAGGGGGTCCACTTGAAGGAGCTCAAAGCTATTTCTGAGTACGTGTGCCTCTTTGATATATACCAAACTAACAACAAAAGTACTACAACAGTATATATTCATATCAATCTTAATACAGCTTCATACACTCATACATATATATGTAAATGATGTACTAAACAAACATGTCTGATAAATGTACAATATCCGGAAGAGCTCTTTGCAATATTAATTAGTACCAGTAATAATCTTAAATATACTATCTAAGCATGCACCTAAAATGCTTTTATTTTAGGTGGTGGAGAGACCTTAATGAACATGTGGAGCTAAGTTATCTTAGGGATCGTGTGGTGGAGAGCTATACATGTTCACACATGTTGTTCTATGAAGAAGGCTTAGCATTCACACGGATAACTTTTACCAAGATAATTGTACTAATTATTATGATGGATGATACATATGATTCCCATGCTACCATCCAGGAATGCAGGAAGCTAAATGAAGCCATACAAAGGTTTTGTCTTTGTCTTAGTGTATGCTGACATAAACTAATTTATATATACTTGCCTGACTAATTCCGATGTAAAGTTAACAATTTGCCTGCCTTGCAGATGGAATGAGAGTGCCGTCTCTGTCCTACCAGAGTACCTAAAAAATTTTTACCATAAATTGTTGAATAATTTTAAGGAGTTTGAGAATCAAGTGGTGGTTAGTGAGAAGTACCGGGTTGCTCATGCTAAAAAAGAGGTACAACAGCGATATAACTATGTTGGGACTGATTCCTTATTTGTTTATTTGATTTTCAGCCAACTTAGGTTTTCAAATTTGACTATTATGTTTCATAAATTTCCATCAATATGTGATGATAAAATTGTCATGACTTTCACAGCAACAAATATGATGGCATAATTTTCATACTAGACTTTTTTTTCAGTAATGATCAACATTAGTTGACAACATGAATTCTATGAAGTCAAGTAAAAAAATAGAGGTGGAAAGCATCAGTGGTGTTGTGGTGAAGTTTTGGTTGCATCATTCCATCCACCAGATTGATGGCTCAACTCTTCATACCAATGAATATTATGCAAAAGCGGGTGCTCTTTTCAAAAGAATTTTATGATGCTAGGGAGTGGTCACTGGTCTCGGTCTCTTTGAGTGCATGTTGGGTTGAATATTTGCGGGTGTGTGAGTGTGGTTTGGAAAATCAAAGCAACAATATTACCATGTTTTGTTAACCTTTTGTTATGAATTTCTTTTTCTTGGGCACAGTTTCAAATACTGTCCCATTATTTTCTCCAGGAAGCTGAATGGTCACATAATAATTACAAGCCAAGTTTTGAAGAGCAGTTGGCTTTATCTACAAAGACTTCAACGGTGCAACTATTATGTGTGTCTACTACGGTCGGCCGGGGTGATGCAATAACAAATGAAGCATTCATGTGGGCAGCTAGCAGTACTACCGTGACATCATGTGCAAAGATAATGCGTTTCATGAATGACATTGCTTCATTTGAGGTACAATTTAATTAATTAAACTTGTCCTTATTAAATGTAATTTTTCAATGCCCAGAACAACATTGTTCCTGAGTGGCCACAGTATTTGTTCAAGCTCATCATTATAGAGAAACGGTAAATTTTCACACAAGTAAAAGAAAAACATGGTGCTCAACATATGACTATATGCTACTATCCATGATTCCCTTAACAACTACTCTATAACAATGTACTTTATAACTTTTTACATTGTTAAATTATGGGTGGAAGGTGAGAAATTATAATTTATCTTTGACATTCATACAGCGTGGGAAGAACAAAGGGGAAATTGCGAGCACCGTTGAGTGCTACATGAATGAGCACAACATCATAAGTGAGGTGGCCTTTGCCAAACTCGATTCACTGGTAGAAGATGAATGGAGAACCATCAACCAAGCCCGTTGTGAACATCATCAGCTACTCCCGGTAGTGCAACGAGTTGTGAACTTGGCTATTTGTATAATGTTCTTTTATGACAAGAGAAAGGATGCGTACACATTCTCCACACATCTACAAGAGATTGTTAGGAATCTTTTCATCAATCCCATTACCATGTAGTTCCCCTTTTAGACTGTATTGTCAAATATTATCTATTTTTTTTTCTTTTTACTTTTGGAGGGATAGATGAAACAAAATCTATATTGTATGATTTTTTCAAATTAACTTGCCTCCCACTAATTAATT]

[+] EMBL AK121131             [TGTTCTATAGAGTGGACTTAAACTAATGTTGATATAGCTTATTACTTTTTATGCTCATTATCCATTTGGTAATGAAATTTGAATTGCATTTAATAATTGTTGGTCGGAAAATTCTATACAGCTTTAGAGACAAACTTTATTTTTTAACTATACATTAATAGTGATAACACATGTAGAATCTTTAAGTTTCTCCACGTTTGATTTTTCTATTGTCAACGAAAAAATCATAATAGGTTAAAGCTAAGGCTGTGTTTAGATCCAAAGTTTGGATCCAAACTTCAGTACTTTTCCATCACATCAACCTGTCATACACACACAACTTTTCAGTCACATCATCTCTAATTTCAACCAAAATCCAAACTTTGCGCTGGACTAAACACAGCCTAAGAAAGAAATTTTGGTTCTTCTCTGTACAAGAGAAGGCTAGTCACAGACACATCTCAAACTTAGTTACAAATTAAATATTTTGTCTTGCAGTTACATTCAACAAATTCAAAGGTGACGATGGGAGGTTCATGAATGGAATAGCTGATGAACCAAGGGGTTTATTAAGTTTATACAATGCAGCTTACCTCCTTGTTCATGATGAGCCAGAACTCGAAGAGGCAATCTCTTTTTCTAGGTACCATCTAAAATCAATGATGCAGGGCAATAACCTCAAACACCCTTTATCTGACCAAGTCAAGCGTGCCCTTAACACACCATTACCAAGGACATCCAAAAGAACAGAGACATTGCATTATCTTTCGGAGTATGGACAAGAGGAAGGGCATATGTCAATTCTTTTGGATCTTGCAAAGGTGGAATTTAACCTTCTGCAGGGGGTCCACTTGAAGGAGCTCAAAGCTATTTCTGAGTACGTGTGCCTCTTTGATATATACCAAACTAACAACAAAAGTACTACAACAGTATATATTCATATCAATCTTAATACAGCTTCATACACTCATACATATATATGTAAATGATGTACTAAACAAACATGTCTGATAAATGTACAATATCCGGAAGAGCTCTTTGCAATATTAATTAGTACCAGTAATAATCTTAAATATACTATCTAAGCATGCACCTAAAATGCTTTTATTTTAGGTGGTGGAGAGACCTTAATGAACATGTGGAGCTAAGTTATCTTAGGGATCGTGTGGTGGAGAGCTATACATGTTCACACATGTTGTTCTATGAAGAAGGCTTAGCATTCACACGGATAACTTTTACCAAGATAATTGTACTAATTATTATGATGGATGATACATATGATTCCCATGCTACCATCCAGGAATGCAGGAAGCTAAATGAAGCCATACAAAGGTTTTGTCTTTGTCTTAGTGTATGCTGACATAAACTAATTTATATATACTTGCCTGACTAATTCCGATGTAAAGTTAACAATTTGCCTGCCTTGCAGATGGAATGAGAGTGCCGTCTCTGTCCTACCAGAGTACCTAAAAAATTTTTACCATAAATTGTTGAATAATTTTAAGGAGTTTGAGAATCAAGTGGTGGTTAGTGAGAAGTACCGGGTTGCTCATGCTAAAAAAGAGGTACAACAGCGATATAACTATGTTGGGACTGATTCCTTATTTGTTTATTTGATTTTCAGCCAACTTAGGTTTTCAAATTTGACTATTATGTTTCATAAATTTCCATCAATATGTGATGATAAAATTGTCATGACTTTCACAGCAACAAATATGATGGCATAATTTTCATACTAGACTTTTTTTTCAGTAATGATCAACATTAGTTGACAACATGAATTCTATGAAGTCAAGTAAAAAAATAGAGGTGGAAAGCATCAGTGGTGTTGTGGTGAAGTTTTGGTTGCATCATTCCATCCACCAGATTGATGGCTCAACTCTTCATACCAATGAATATTATGCAAAAGCGGGTGCTCTTTTCAAAAGAATTTTATGATGCTAGGGAGTGGTCACTGGTCTCGGTCTCTTTGAGTGCATGTTGGGTTGAATATTTGCGGGTGTGTGAGTGTGGTTTGGAAAATCAAAGCAACAATATTACCATGTTTTGTTAACCTTTTGTTATGAATTTCTTTTTCTTGGGCACAGTTTCAAATACTGTCCCATTATTTTCTCCAGGAAGCTGAATGGTCACATAATAATTACAAGCCAAGTTTTGAAGAGCAGTTGGCTTTATCTACAAAGACTTCAACGGTGCAACTATTATGTGTGTCTACTACGGTCGGCCGGGGTGATGCAATAACAAATGAAGCATTCATGTGGGCAGCTAGCAGTACTACCGTGACATCATGTGCAAAGATAATGCGTTTCATGAATGACATTGCTTCATTTGAGGTACAATTTAATTAATTAAACTTGTCCTTATTAAATGTAATTTTTCAATGCCCAGAACAACATTGTTCCTGAGTGGCCACAGTATTTGTTCAAGCTCATCATTATAGAGAAACGGTAAATTTTCACACAAGTAAAAGAAAAACATGGTGCTCAACATATGACTATATGCTACTATCCATGATTCCCTTAACAACTACTCTATAACAATGTACTTTATAACTTTTTACATTGTTAAATTATGGGTGGAAGGTGAGAAATTATAATTTATCTTTGACATTCATACAGCGTGGGAAGAACAAAGGGGAAATTGCGAGCACCGTTGAGTGCTACATGAATGAGCACAACATCATAAGTGAGGTGGCCTTTGCCAAACTCGATTCACTGGTAGAAGATGAATGGAGAACCATCAACCAAGCCCGTTGTGAACATCATCAGCTACTCCCGGTAGTGCAACGAGTTGTGAACTTGGCTATTTGTATAATGTTCTTTTATGACAAGAGAAAGGATGCGTACACATTCTCCACACATCTACAAGAGATTGTTAGGAATCTTTTCATCAATCCCATTACCATGTAGTTCCCCTTTTAGACTGTATTGTCAAATATTATCTATTTTTTTTTCTTTTTACTTTTGGAGGGATAGATGAAACAAAATCTATATTGTATGATTTTTTCAAATTAACTTGCCTCCCACTAATTAATT]




>consensus_958#0
TGTTCTATAGAGTGGACTTAAACTAATGTTGATATAGCTTATTACTTTTTATGCTCATTA
TCCATTTGGTAATGAAATTTGAATTGCATTTAATAATTGTTGGTCGGAAAATTCTATACA
GCTTTAGAGACAAACTTTATTTTTTAACTATACATTAATAGTGATAACACATGTAGAATC
TTTAAGTTTCTCCACGTTTGATTTTTCTATTGTCAACGAAAAAATCATAATAGGTTAAAG
CTAAGGCTGTGTTTAGATCCAAAGTTTGGATCCAAACTTCAGTACTTTTCCATCACATCA
ACCTGTCATACACACACAACTTTTCAGTCACATCATCTCTAATTTCAACCAAAATCCAAA
CTTTGCGCTGGACTAAACACAGCCTAAGAAAGAAATTTTGGTTCTTCTCTGTACAAGAGA
AGGCTAGTCACAGACACATCTCAAACTTAGTTACAAATTAAATATTTTGTCTTGCAGTTA
CATTCAACAAATTCAAAGGTGACGATGGGAGGTTCATGAATGGAATAGCTGATGAACCAA
GGGGTTTATTAAGTTTATACAATGCAGCTTACCTCCTTGTTCATGATGAGCCAGAACTCG
AAGAGGCAATCTCTTTTTCTAGGTACCATCTAAAATCAATGATGCAGGGCAATAACCTCA
AACACCCTTTATCTGACCAAGTCAAGCGTGCCCTTAACACACCATTACCAAGGACATCCA
AAAGAACAGAGACATTGCATTATCTTTCGGAGTATGGACAAGAGGAAGGGCATATGTCAA
TTCTTTTGGATCTTGCAAAGGTGGAATTTAACCTTCTGCAGGGGGTCCACTTGAAGGAGC
TCAAAGCTATTTCTGAGTACGTGTGCCTCTTTGATATATACCAAACTAACAACAAAAGTA
CTACAACAGTATATATTCATATCAATCTTAATACAGCTTCATACACTCATACATATATAT
GTAAATGATGTACTAAACAAACATGTCTGATAAATGTACAATATCCGGAAGAGCTCTTTG
CAATATTAATTAGTACCAGTAATAATCTTAAATATACTATCTAAGCATGCACCTAAAATG
CTTTTATTTTAGGTGGTGGAGAGACCTTAATGAACATGTGGAGCTAAGTTATCTTAGGGA
TCGTGTGGTGGAGAGCTATACATGTTCACACATGTTGTTCTATGAAGAAGGCTTAGCATT
CACACGGATAACTTTTACCAAGATAATTGTACTAATTATTATGATGGATGATACATATGA
TTCCCATGCTACCATCCAGGAATGCAGGAAGCTAAATGAAGCCATACAAAGGTTTTGTCT
TTGTCTTAGTGTATGCTGACATAAACTAATTTATATATACTTGCCTGACTAATTCCGATG
TAAAGTTAACAATTTGCCTGCCTTGCAGATGGAATGAGAGTGCCGTCTCTGTCCTACCAG
AGTACCTAAAAAATTTTTACCATAAATTGTTGAATAATTTTAAGGAGTTTGAGAATCAAG
TGGTGGTTAGTGAGAAGTACCGGGTTGCTCATGCTAAAAAAGAGGTACAACAGCGATATA
ACTATGTTGGGACTGATTCCTTATTTGTTTATTTGATTTTCAGCCAACTTAGGTTTTCAA
ATTTGACTATTATGTTTCATAAATTTCCATCAATATGTGATGATAAAATTGTCATGACTT
TCACAGCAACAAATATGATGGCATAATTTTCATACTAGACTTTTTTTTCAGTAATGATCA
ACATTAGTTGACAACATGAATTCTATGAAGTCAAGTAAAAAAATAGAGGTGGAAAGCATC
AGTGGTGTTGTGGTGAAGTTTTGGTTGCATCATTCCATCCACCAGATTGATGGCTCAACT
CTTCATACCAATGAATATTATGCAAAAGCGGGTGCTCTTTTCAAAAGAATTTTATGATGC
TAGGGAGTGGTCACTGGTCTCGGTCTCTTTGAGTGCATGTTGGGTTGAATATTTGCGGGT
GTGTGAGTGTGGTTTGGAAAATCAAAGCAACAATATTACCATGTTTTGTTAACCTTTTGT
TATGAATTTCTTTTTCTTGGGCACAGTTTCAAATACTGTCCCATTATTTTCTCCAGGAAG
CTGAATGGTCACATAATAATTACAAGCCAAGTTTTGAAGAGCAGTTGGCTTTATCTACAA
AGACTTCAACGGTGCAACTATTATGTGTGTCTACTACGGTCGGCCGGGGTGATGCAATAA
CAAATGAAGCATTCATGTGGGCAGCTAGCAGTACTACCGTGACATCATGTGCAAAGATAA
TGCGTTTCATGAATGACATTGCTTCATTTGAGGTACAATTTAATTAATTAAACTTGTCCT
TATTAAATGTAATTTTTCAATGCCCAGAACAACATTGTTCCTGAGTGGCCACAGTATTTG
TTCAAGCTCATCATTATAGAGAAACGGTAAATTTTCACACAAGTAAAAGAAAAACATGGT
GCTCAACATATGACTATATGCTACTATCCATGATTCCCTTAACAACTACTCTATAACAAT
GTACTTTATAACTTTTTACATTGTTAAATTATGGGTGGAAGGTGAGAAATTATAATTTAT
CTTTGACATTCATACAGCGTGGGAAGAACAAAGGGGAAATTGCGAGCACCGTTGAGTGCT
ACATGAATGAGCACAACATCATAAGTGAGGTGGCCTTTGCCAAACTCGATTCACTGGTAG
AAGATGAATGGAGAACCATCAACCAAGCCCGTTGTGAACATCATCAGCTACTCCCGGTAG
TGCAACGAGTTGTGAACTTGGCTATTTGTATAATGTTCTTTTATGACAAGAGAAAGGATG
CGTACACATTCTCCACACATCTACAAGAGATTGTTAGGAATCTTTTCATCAATCCCATTA
CCATGTAGTTCCCCTTTTAGACTGTATTGTCAAATATTATCTATTTTTTTTTCTTTTTAC
TTTTGGAGGGATAGATGAAACAAAATCTATATTGTATGATTTTTTCAAATTAACTTGCCT
CCCACTAATTAATT

consensusID : consensus_958#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1632
fasta sequence 
                              [CACAACCGCTCCAGAGATCAGAGGAATGGATGAGGCAGAGAGCCAAGAGGCTCAAGATGAATGTCCGCACACTATTCTGGACTTCCAATGATGTGGTTGTAAGGATGAACTTAGTGGATGCAGTCCAACGTCTAGGAATTGGTCACCTCTTCAAAGATGAGATAAGGCGCACACTAAATGATATACACCAAAGTGAATTTACTAGCTCTAGCCTCCATGAGGTTGCTCTTCGGTTTCGCTTGCTTAGGGAGCACGGCTTATGGGTATCTCCAGTTACATTCAACAAATTCAAAGGTGACGATGGGAGGTTCATGAATGGAATAGCTGATGAACCAAGGGGTTTATTAAGTTTATACAATGCAGCTTACCTCCTTGTTCATGATGAGCCAGAACTCGAAGAGGCAATCTCTTTTTCTAGGTACCATCTAAAATCAATGATGCAGGGCAATAACCTCAAACACCCTTTATCTGACCAAGTCAAGCGTGCCCTTAACACACCATTACCAAGGACATCCAAAAGAACAGAGACATTGCATTATCTTTCGGAGTATGGACAAGAGGAAGGGCATATGTCAATTCTTTTGGATCTTGCAAAGGTGGAATTTAACCTTCTGCAGGGGGTCCACTTGAAGGAGCTCAAAGCTATTTCTGAGTGGTGGAGAGACCTTAATGAACATGTGGAGCTAAGTTATCTTAGGGATCGTGTGGTGGAGAGCTATACATGTTCACACATGTTGTTCTATGAAGAAGGCTTAGCATTCACACGGATAACTTTTACCAAGATAATTGTACTAATTATTATGATGGATGATACATATGATTCCCATGCTACCATCCAGGAATGCAGGAAGCTAAATGAAGCCATACAAAGATGGAATGAGAGTGCCGTCTCTGTCCTACCAGAGTACCTAAAAAATTTTTACCATAAATTGTTGAATAATTTTAAGGAGTTTGAGAATCAAGTGGTGGTTAGTGAGAAGTACCGGGTTGCTCATGCTAAAAAAGAGTTTCGAATACTGTCCCATTATTTTCTCCAGGAAGCTGAATGGTCACATAATAATTACAAGCCAAGTTTTGAAGAGCAGTTGGCTTTATCTACAAAGACTTCAACGGTGCAACTATTATGTGTGTCTACTACGGTCGGCCGGGGTGATGCAATAACAAATGAAGCATTCATGTGGGCAGCTAGCAGTACTACCGTGACATCATGTGCAAAGATAATGCGTTTCATGAATGACATTGCTTCATTTGAGCGTGGGAAGAACAAAGGGGAAATTGCGAGCACCGTTGAGTGCTACATGAATGAGCACAACATCATAAGTGAGGTGGCCTTTGCCAAACTCGATTCACTGGTAGAAGATGAATGGAGAACCATCAACCAAGCCCGTTGTGAACATCATCAGCTACTCCCGGTAGTGCAACGAGTTGTGAACTTGGCTATTTGTATAATGTTCTTTTATGACAAGAGAAAGGATGCGTACACATTCTCCACACATCTACAAGAGATTGTTAGGAATCTTTTCATCAATCCCATTACCATGTAGTTCCCCTTTTAGACTGTATTGTCAAATATTATCTATTTTTTTTTCTTTTTACTTTTGGAGGGATAGATGAAACAAAATCTATATTGTA]

[+] EMBL AK062280             [CACAACCGCTCCAGAGATCAGAGGAATGGATGAGGCAGAGAGCCAAGAGGCTCAAGATGAATGTCCGCACACTATTCTGGACTTCCAATGATGTGGTTGTAAGGATGAACTTAGTGGATGCAGTCCAACGTCTAGGAATTGGTCACCTCTTCAAAGATGAGATAAGGCGCACACTAAATGATATACACCAAAGTGAATTTACTAGCTCTAGCCTCCATGAGGTTGCTCTTCGGTTTCGCTTGCTTAGGGAGCACGGCTTATGGGTATCTCCAGTTACATTCAACAAATTCAAAGGTGACGATGGGAGGTTCATGAATGGAATAGCTGATGAACCAAGGGGTTTATTAAGTTTATACAATGCAGCTTACCTCCTTGTTCATGATGAGCCAGAACTCGAAGAGGCAATCTCTTTTTCTAGGTACCATCTAAAATCAATGATGCAGGGCAATAACCTCAAACACCCTTTATCTGACCAAGTCAAGCGTGCCCTTAACACACCATTACCAAGGACATCCAAAAGAACAGAGACATTGCATTATCTTTCGGAGTATGGACAAGAGGAAGGGCATATGTCAATTCTTTTGGATCTTGCAAAGGTGGAATTTAACCTTCTGCAGGGGGTCCACTTGAAGGAGCTCAAAGCTATTTCTGAGTGGTGGAGAGACCTTAATGAACATGTGGAGCTAAGTTATCTTAGGGATCGTGTGGTGGAGAGCTATACATGTTCACACATGTTGTTCTATGAAGAAGGCTTAGCATTCACACGGATAACTTTTACCAAGATAATTGTACTAATTATTATGATGGATGATACATATGATTCCCATGCTACCATCCAGGAATGCAGGAAGCTAAATGAAGCCATACAAAGATGGAATGAGAGTGCCGTCTCTGTCCTACCAGAGTACCTAAAAAATTTTTACCATAAATTGTTGAATAATTTTAAGGAGTTTGAGAATCAAGTGGTGGTTAGTGAGAAGTACCGGGTTGCTCATGCTAAAAAAGAGTTTCGAATACTGTCCCATTATTTTCTCCAGGAAGCTGAATGGTCACATAATAATTACAAGCCAAGTTTTGAAGAGCAGTTGGCTTTATCTACAAAGACTTCAACGGTGCAACTATTATGTGTGTCTACTACGGTCGGCCGGGGTGATGCAATAACAAATGAAGCATTCATGTGGGCAGCTAGCAGTACTACCGTGACATCATGTGCAAAGATAATGCGTTTCATGAATGACATTGCTTCATTTGAGCGTGGGAAGAACAAAGGGGAAATTGCGAGCACCGTTGAGTGCTACATGAATGAGCACAACATCATAAGTGAGGTGGCCTTTGCCAAACTCGATTCACTGGTAGAAGATGAATGGAGAACCATCAACCAAGCCCGTTGTGAACATCATCAGCTACTCCCGGTAGTGCAACGAGTTGTGAACTTGGCTATTTGTATAATGTTCTTTTATGACAAGAGAAAGGATGCGTACACATTCTCCACACATCTACAAGAGATTGTTAGGAATCTTTTCATCAATCCCATTACCATGTAGTTCCCCTTTTAGACTGTATTGTCAAATATTATCTATTTTTTTTTCTTTTTACTTTTGGAGGGATAGATGAAACAAAATCTATATTGTA]




>consensus_958#1
CACAACCGCTCCAGAGATCAGAGGAATGGATGAGGCAGAGAGCCAAGAGGCTCAAGATGA
ATGTCCGCACACTATTCTGGACTTCCAATGATGTGGTTGTAAGGATGAACTTAGTGGATG
CAGTCCAACGTCTAGGAATTGGTCACCTCTTCAAAGATGAGATAAGGCGCACACTAAATG
ATATACACCAAAGTGAATTTACTAGCTCTAGCCTCCATGAGGTTGCTCTTCGGTTTCGCT
TGCTTAGGGAGCACGGCTTATGGGTATCTCCAGTTACATTCAACAAATTCAAAGGTGACG
ATGGGAGGTTCATGAATGGAATAGCTGATGAACCAAGGGGTTTATTAAGTTTATACAATG
CAGCTTACCTCCTTGTTCATGATGAGCCAGAACTCGAAGAGGCAATCTCTTTTTCTAGGT
ACCATCTAAAATCAATGATGCAGGGCAATAACCTCAAACACCCTTTATCTGACCAAGTCA
AGCGTGCCCTTAACACACCATTACCAAGGACATCCAAAAGAACAGAGACATTGCATTATC
TTTCGGAGTATGGACAAGAGGAAGGGCATATGTCAATTCTTTTGGATCTTGCAAAGGTGG
AATTTAACCTTCTGCAGGGGGTCCACTTGAAGGAGCTCAAAGCTATTTCTGAGTGGTGGA
GAGACCTTAATGAACATGTGGAGCTAAGTTATCTTAGGGATCGTGTGGTGGAGAGCTATA
CATGTTCACACATGTTGTTCTATGAAGAAGGCTTAGCATTCACACGGATAACTTTTACCA
AGATAATTGTACTAATTATTATGATGGATGATACATATGATTCCCATGCTACCATCCAGG
AATGCAGGAAGCTAAATGAAGCCATACAAAGATGGAATGAGAGTGCCGTCTCTGTCCTAC
CAGAGTACCTAAAAAATTTTTACCATAAATTGTTGAATAATTTTAAGGAGTTTGAGAATC
AAGTGGTGGTTAGTGAGAAGTACCGGGTTGCTCATGCTAAAAAAGAGTTTCGAATACTGT
CCCATTATTTTCTCCAGGAAGCTGAATGGTCACATAATAATTACAAGCCAAGTTTTGAAG
AGCAGTTGGCTTTATCTACAAAGACTTCAACGGTGCAACTATTATGTGTGTCTACTACGG
TCGGCCGGGGTGATGCAATAACAAATGAAGCATTCATGTGGGCAGCTAGCAGTACTACCG
TGACATCATGTGCAAAGATAATGCGTTTCATGAATGACATTGCTTCATTTGAGCGTGGGA
AGAACAAAGGGGAAATTGCGAGCACCGTTGAGTGCTACATGAATGAGCACAACATCATAA
GTGAGGTGGCCTTTGCCAAACTCGATTCACTGGTAGAAGATGAATGGAGAACCATCAACC
AAGCCCGTTGTGAACATCATCAGCTACTCCCGGTAGTGCAACGAGTTGTGAACTTGGCTA
TTTGTATAATGTTCTTTTATGACAAGAGAAAGGATGCGTACACATTCTCCACACATCTAC
AAGAGATTGTTAGGAATCTTTTCATCAATCCCATTACCATGTAGTTCCCCTTTTAGACTG
TATTGTCAAATATTATCTATTTTTTTTTCTTTTTACTTTTGGAGGGATAGATGAAACAAA
ATCTATATTGTA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_958#0      TGTTCTATAGAGTGGACTTAAACTAATGTTGATATAGCTTATTACTTTTTATGCTCATTA 60
consensus_958#1      ------------------------------------------------------------
                                                                                 

consensus_958#0      TCCATTTGGTAATGAAATTTGAATTGCATTTAATAATTGTTGGTCGGAAAATTCTATACA 120
consensus_958#1      ------------------------------------------------------------
                                                                                 

consensus_958#0      GCTTTAGAGACAAACTTTATTTTTTAACTATACATTAATAGTGATAACACATGTAGAATC 180
consensus_958#1      ------------------------------------------------------------
                                                                                 

consensus_958#0      TTTAAGTTTCTCCACGTTTGATTTTTCTATTGTCAACGAAAAAATCATAATAGGTTAAAG 240
consensus_958#1      -CACAACCGCTCCAGA---GATCAGAGGAATGGATGAGGCAGAGAGCCAAGAGGCTCAAG 56
                         *    *****     ***      * **     *  * *     ** *** * ***

consensus_958#0      CTAAGGCTGTGTTTAGATCCAAAGTTTGGATCCAAACTTCAGTACTTTTCCATCACATCA 300
consensus_958#1      ATGAA----TGTCCGCACACTATTCTGGACTTCCAA---TGATGTGGTTGTAA-GGATGA 108
                      * *     ***    *  * *   * *  * * **      *    **  *    ** *

consensus_958#0      ACCTGTCATACACACACAACTTTTCAGTCAC--ATCATCTCTAATTTCAACCAAAATCCA 358
consensus_958#1      ACTTAGTGGATGCAGTCCAACGTCTAGGAATTGGTCACCTCT----TCAAAGATGAGATA 164
                     ** *     *  **  * *   *  **  *    *** ****    ****  *  *   *

consensus_958#0      AACTTTGCGCTGGACTAAACACAGCCTAAGAAAGAAATTTTGGTTCTTCTCTGTACAAGA 418
consensus_958#1      AGGCGCACACTAAATGATATACA--CCAAAGTGAATTTACTAGCTCTAGCCTCCATGAG- 221
                     *      * **  *  * * ***  * **     *  *  * * ***   **  *  ** 

consensus_958#0      GAAGGCTAGTCACAGACACATCTCAAACTTAGTTACAAATTAAATATTTTGTCTTGCAGT 478
consensus_958#1      ----GTTGCTCTTCGGT--TTCGCTTGCTTAGGGA-GCACGGCTTATGGGTATCTCCAGT 274
                         * *  **   *     ** *   *****  *   *     ***       * ****

consensus_958#0      TACATTCAACAAATTCAAAGGTGACGATGGGAGGTTCATGAATGGAATAGCTGATGAACC 538
consensus_958#1      TACATTCAACAAATTCAAAGGTGACGATGGGAGGTTCATGAATGGAATAGCTGATGAACC 334
                     ************************************************************

consensus_958#0      AAGGGGTTTATTAAGTTTATACAATGCAGCTTACCTCCTTGTTCATGATGAGCCAGAACT 598
consensus_958#1      AAGGGGTTTATTAAGTTTATACAATGCAGCTTACCTCCTTGTTCATGATGAGCCAGAACT 394
                     ************************************************************

consensus_958#0      CGAAGAGGCAATCTCTTTTTCTAGGTACCATCTAAAATCAATGATGCAGGGCAATAACCT 658
consensus_958#1      CGAAGAGGCAATCTCTTTTTCTAGGTACCATCTAAAATCAATGATGCAGGGCAATAACCT 454
                     ************************************************************

consensus_958#0      CAAACACCCTTTATCTGACCAAGTCAAGCGTGCCCTTAACACACCATTACCAAGGACATC 718
consensus_958#1      CAAACACCCTTTATCTGACCAAGTCAAGCGTGCCCTTAACACACCATTACCAAGGACATC 514
                     ************************************************************

consensus_958#0      CAAAAGAACAGAGACATTGCATTATCTTTCGGAGTATGGACAAGAGGAAGGGCATATGTC 778
consensus_958#1      CAAAAGAACAGAGACATTGCATTATCTTTCGGAGTATGGACAAGAGGAAGGGCATATGTC 574
                     ************************************************************

consensus_958#0      AATTCTTTTGGATCTTGCAAAGGTGGAATTTAACCTTCTGCAGGGGGTCCACTTGAAGGA 838
consensus_958#1      AATTCTTTTGGATCTTGCAAAGGTGGAATTTAACCTTCTGCAGGGGGTCCACTTGAAGGA 634
                     ************************************************************

consensus_958#0      GCTCAAAGCTATTTCTGAGTACGTGTGCCTCTTTGATATATACCAAACTAACAACAAAAG 898
consensus_958#1      GCTCAAAGCTATTTCTGAGT---------------------------------------- 654
                     ********************                                        

consensus_958#0      TACTACAACAGTATATATTCATATCAATCTTAATACAGCTTCATACACTCATACATATAT 958
consensus_958#1      ------------------------------------------------------------
                                                                                 

consensus_958#0      ATGTAAATGATGTACTAAACAAACATGTCTGATAAATGTACAATATCCGGAAGAGCTCTT 1018
consensus_958#1      ------------------------------------------------------------
                                                                                 

consensus_958#0      TGCAATATTAATTAGTACCAGTAATAATCTTAAATATACTATCTAAGCATGCACCTAAAA 1078
consensus_958#1      ------------------------------------------------------------
                                                                                 

consensus_958#0      TGCTTTTATTTTAGGTGGTGGAGAGACCTTAATGAACATGTGGAGCTAAGTTATCTTAGG 1138
consensus_958#1      ----------------GGTGGAGAGACCTTAATGAACATGTGGAGCTAAGTTATCTTAGG 698
                                     ********************************************

consensus_958#0      GATCGTGTGGTGGAGAGCTATACATGTTCACACATGTTGTTCTATGAAGAAGGCTTAGCA 1198
consensus_958#1      GATCGTGTGGTGGAGAGCTATACATGTTCACACATGTTGTTCTATGAAGAAGGCTTAGCA 758
                     ************************************************************

consensus_958#0      TTCACACGGATAACTTTTACCAAGATAATTGTACTAATTATTATGATGGATGATACATAT 1258
consensus_958#1      TTCACACGGATAACTTTTACCAAGATAATTGTACTAATTATTATGATGGATGATACATAT 818
                     ************************************************************

consensus_958#0      GATTCCCATGCTACCATCCAGGAATGCAGGAAGCTAAATGAAGCCATACAAAGGTTTTGT 1318
consensus_958#1      GATTCCCATGCTACCATCCAGGAATGCAGGAAGCTAAATGAAGCCATACAAAG------- 871
                     *****************************************************       

consensus_958#0      CTTTGTCTTAGTGTATGCTGACATAAACTAATTTATATATACTTGCCTGACTAATTCCGA 1378
consensus_958#1      ------------------------------------------------------------
                                                                                 

consensus_958#0      TGTAAAGTTAACAATTTGCCTGCCTTGCAGATGGAATGAGAGTGCCGTCTCTGTCCTACC 1438
consensus_958#1      ------------------------------ATGGAATGAGAGTGCCGTCTCTGTCCTACC 901
                                                   ******************************

consensus_958#0      AGAGTACCTAAAAAATTTTTACCATAAATTGTTGAATAATTTTAAGGAGTTTGAGAATCA 1498
consensus_958#1      AGAGTACCTAAAAAATTTTTACCATAAATTGTTGAATAATTTTAAGGAGTTTGAGAATCA 961
                     ************************************************************

consensus_958#0      AGTGGTGGTTAGTGAGAAGTACCGGGTTGCTCATGCTAAAAAAGAGGTACAACAGCGATA 1558
consensus_958#1      AGTGGTGGTTAGTGAGAAGTACCGGGTTGCTCATGCTAAAAAAGAG-------------- 1007
                     **********************************************              

consensus_958#0      TAACTATGTTGGGACTGATTCCTTATTTGTTTATTTGATTTTCAGCCAACTTAGGTTTTC 1618
consensus_958#1      ------------------------------------------------------------
                                                                                 

consensus_958#0      AAATTTGACTATTATGTTTCATAAATTTCCATCAATATGTGATGATAAAATTGTCATGAC 1678
consensus_958#1      ------------------------------------------------------------
                                                                                 

consensus_958#0      TTTCACAGCAACAAATATGATGGCATAATTTTCATACTAGACTTTTTTTTCAGTAATGAT 1738
consensus_958#1      ------------------------------------------------------------
                                                                                 

consensus_958#0      CAACATTAGTTGACAACATGAATTCTATGAAGTCAAGTAAAAAAATAGAGGTGGAAAGCA 1798
consensus_958#1      ------------------------------------------------------------
                                                                                 

consensus_958#0      TCAGTGGTGTTGTGGTGAAGTTTTGGTTGCATCATTCCATCCACCAGATTGATGGCTCAA 1858
consensus_958#1      ------------------------------------------------------------
                                                                                 

consensus_958#0      CTCTTCATACCAATGAATATTATGCAAAAGCGGGTGCTCTTTTCAAAAGAATTTTATGAT 1918
consensus_958#1      ------------------------------------------------------------
                                                                                 

consensus_958#0      GCTAGGGAGTGGTCACTGGTCTCGGTCTCTTTGAGTGCATGTTGGGTTGAATATTTGCGG 1978
consensus_958#1      ------------------------------------------------------------
                                                                                 

consensus_958#0      GTGTGTGAGTGTGGTTTGGAAAATCAAAGCAACAATATTACCATGTTTTGTTAACCTTTT 2038
consensus_958#1      ------------------------------------------------------------
                                                                                 

consensus_958#0      GTTATGAATTTCTTTTTCTTGGGCACAGTTTCAAATACTGTCCCATTATTTTCTCCAGGA 2098
consensus_958#1      ----------------------------TTTCGAATACTGTCCCATTATTTTCTCCAGGA 1039
                                                 **** ***************************

consensus_958#0      AGCTGAATGGTCACATAATAATTACAAGCCAAGTTTTGAAGAGCAGTTGGCTTTATCTAC 2158
consensus_958#1      AGCTGAATGGTCACATAATAATTACAAGCCAAGTTTTGAAGAGCAGTTGGCTTTATCTAC 1099
                     ************************************************************

consensus_958#0      AAAGACTTCAACGGTGCAACTATTATGTGTGTCTACTACGGTCGGCCGGGGTGATGCAAT 2218
consensus_958#1      AAAGACTTCAACGGTGCAACTATTATGTGTGTCTACTACGGTCGGCCGGGGTGATGCAAT 1159
                     ************************************************************

consensus_958#0      AACAAATGAAGCATTCATGTGGGCAGCTAGCAGTACTACCGTGACATCATGTGCAAAGAT 2278
consensus_958#1      AACAAATGAAGCATTCATGTGGGCAGCTAGCAGTACTACCGTGACATCATGTGCAAAGAT 1219
                     ************************************************************

consensus_958#0      AATGCGTTTCATGAATGACATTGCTTCATTTGAGGTACAATTTAATTAATTAAACTTGTC 2338
consensus_958#1      AATGCGTTTCATGAATGACATTGCTTCATTTGAG-------------------------- 1253
                     **********************************                          

consensus_958#0      CTTATTAAATGTAATTTTTCAATGCCCAGAACAACATTGTTCCTGAGTGGCCACAGTATT 2398
consensus_958#1      ------------------------------------------------------------
                                                                                 

consensus_958#0      TGTTCAAGCTCATCATTATAGAGAAACGGTAAATTTTCACACAAGTAAAAGAAAAACATG 2458
consensus_958#1      ------------------------------------------------------------
                                                                                 

consensus_958#0      GTGCTCAACATATGACTATATGCTACTATCCATGATTCCCTTAACAACTACTCTATAACA 2518
consensus_958#1      ------------------------------------------------------------
                                                                                 

consensus_958#0      ATGTACTTTATAACTTTTTACATTGTTAAATTATGGGTGGAAGGTGAGAAATTATAATTT 2578
consensus_958#1      ------------------------------------------------------------
                                                                                 

consensus_958#0      ATCTTTGACATTCATACAGCGTGGGAAGAACAAAGGGGAAATTGCGAGCACCGTTGAGTG 2638
consensus_958#1      -------------------CGTGGGAAGAACAAAGGGGAAATTGCGAGCACCGTTGAGTG 1294
                                        *****************************************

consensus_958#0      CTACATGAATGAGCACAACATCATAAGTGAGGTGGCCTTTGCCAAACTCGATTCACTGGT 2698
consensus_958#1      CTACATGAATGAGCACAACATCATAAGTGAGGTGGCCTTTGCCAAACTCGATTCACTGGT 1354
                     ************************************************************

consensus_958#0      AGAAGATGAATGGAGAACCATCAACCAAGCCCGTTGTGAACATCATCAGCTACTCCCGGT 2758
consensus_958#1      AGAAGATGAATGGAGAACCATCAACCAAGCCCGTTGTGAACATCATCAGCTACTCCCGGT 1414
                     ************************************************************

consensus_958#0      AGTGCAACGAGTTGTGAACTTGGCTATTTGTATAATGTTCTTTTATGACAAGAGAAAGGA 2818
consensus_958#1      AGTGCAACGAGTTGTGAACTTGGCTATTTGTATAATGTTCTTTTATGACAAGAGAAAGGA 1474
                     ************************************************************

consensus_958#0      TGCGTACACATTCTCCACACATCTACAAGAGATTGTTAGGAATCTTTTCATCAATCCCAT 2878
consensus_958#1      TGCGTACACATTCTCCACACATCTACAAGAGATTGTTAGGAATCTTTTCATCAATCCCAT 1534
                     ************************************************************

consensus_958#0      TACCATGTAGTTCCCCTTTTAGACTGTATTGTCAAATATTATCTATTTTTTTTTCTTTTT 2938
consensus_958#1      TACCATGTAGTTCCCCTTTTAGACTGTATTGTCAAATATTATCTATTTTTTTTTCTTTTT 1594
                     ************************************************************

consensus_958#0      ACTTTTGGAGGGATAGATGAAACAAAATCTATATTGTATGATTTTTTCAAATTAACTTGC 2998
consensus_958#1      ACTTTTGGAGGGATAGATGAAACAAAATCTATATTGTA---------------------- 1632
                     **************************************                      

consensus_958#0      CTCCCACTAATTAATT 3014
consensus_958#1      ----------------


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)