These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9589#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1605 fasta sequence [AGCCATCTCTCTCTCTCATTCCAAGCTAAAGCCAAGCAAGCCGGCCGCCTCCTTCTCCTACCTCCAGCCTTCAGGCAGCTGCTAAATCGAACGCGACGCCGCACCCACCGCGCCCAATTCACCGCCGAGATCTCAACCCCATACCCCATGGGGATCTCCCACCCGCTGTCCGACGACTTCGACGCTTCTCCCGTGCTCTCGCCGCCGCCGCCGCCGTCCTCATGCTGCCCCCCCGCCCACGACGACCACTACCTTGAGCATCAGGTTTCCAGGATGGACACGCTCCCCGGCCTCGCCATCAAGTACGGCGTCGAGATATCTGACATCAAGAGGGCAAACAGTTTGATGACTGACAGCCAGATGTTCGCACACAAAATGTTGCTCATACCTCTACCAGGAAGACCCATGCCATCCTCTGTAAGGCTCAATGGTTCTGGTCAGAANATGAAGAGAGCGTGGGCTCCAAACAATNCAGC-AAACAGAGATGTTACGGATTCGCTAGACTCATCCNACTACNATTCTTCTNAGCAGCAAATGTCACTCGCCATGAGCACCTTGCAGTCCTATTATGGTCTAACTCCTNCAAATGGGGCTATGACAGATGCTGGCACTGAGATGTCCTTGTACAGTAAGGGCAGTTTGGAGCGTATCAACAGTGAAACATTGGTCACTTCATCTAGATTACCAGACACACATAATACCGACAGAAGTAGGAACTCTGAAGACACGTCGAATGGCTTTTCAGCAACAAACGGTGCCAGTGGGGCCAAGATCAATGGGAC-AGCCAAAGC-AAAGCAAGAT-GGTTCCATTCGTCGGCGGCAAAAAGTTGAAGCTGATCAAGTGTCTAACACCACAGATACCCAGGACGATGTTTTTACAGACCCAATTAAGATGACCAAGAGTTTGTTGCCAAGGCCAATTTCTAGTATCCGACAAAACATGGNCACAAGCAACCCAGAGTCCAGCCTGAAGAGCAATGGTTCATTTCTGAGCGGATTTAGATCAGTGCGGAAGTCGNCTAGCACACCAAA-TTTGCAGATGCAGAGAATGGGATCTCTATGTGGTCAAGCTCGGCATGGACTTTCAACCATGAGTCGTTCACGCGACCATTGCTTGATGGCCTTCCGAAACCCACAGCACCTAGGAGGACCAAAGCTGCTTTGGATTGAGCTGCCTGTGGCTGTAGTAGGTTTGTCTG-CGAT-GATCCAACTT-GAATTTG-CCAA-GAAG-AAGCCGGT-GGAAAAT-GGAAGTTGTGG-CTTGGCTTGTTTT--CAGAGTTTTTATTTTGACGG-CAGTTGCACCCTTGACG-CCAGCGCTGCATTCTTCATCTTACCTGTGGCAAAATGTAGAGCTCAATACTTTTCAGTGCCATGGAAGCAAGCGGTGGTTCTGGCATAGAAACTCATATATAATTGTATCAATATACATACATGTATTCTTTACTCTGTTATGTAGATGATGTGCTGGTATATAATTTAGTATAGAGTTTTGAGAAAGAGAGCAGAGAGTTTACAGACAGAGGACCTATATACGGAGTATATCCCATGCATTCTAATTGAGGCATGCAGTTGTGTGATGTCACAGCAAGTGCTACTTTAATTTGAAAAAAAA] [+] EMBL CA756256 [AGCCATCTCTCTCTCTCATTCCAAGCTAAAGCCAAGCAAGCCGGCCGCCTCCTTCTCCTACCTCCAGCCTTCAGGCAGCTGCTAAATCGAACGCGACGCCGCACCCACCGCGCCCAATTCACCGCCGAGATCTCAACCCCATACCCCATGGGGATCTCCCACCCGCTGTCCGACGACTTCGACGCTTCTCCCGTGCTCTCGCCGCCGCCGCCGCCGTCCTCATGCTGCCCCCCCGCCCACGACGACCACTACCTTGAGCATCAGGTTTCCAGGATGGACACGCTCCCCGGCCTCGCCATCAAGTACGGCGTCGAGATATCTGACATCAAGAGGGCAAACAGTTTGATGACTGACAGCCAGATGTTCGCACACAAAATGTTGCTCATACCTCTACCAGGAAGACCCATGCCATCCTCTGTAAGGCTCAATGGTTCTGGTCAGAANATGAAGAGAGCGTGGGCTCCAAACAATNCAGC AAACAGAGATGTTACGGATTCGCTAGACTCATCCNACTACNATTCTTCTNAGCAGCAAATGTCACTCGCCATGAGCACCTTGCAGTCCTATTATGGTCTAACTCCTNCAAATGGGGCTATGACAGATGCTG ] [+] EMBL CF308446 [ AGCATCAGGTTTCCAGGATGGACACGCTCCCCGGCCTCGCCATCAAGTACGGCGTCGAGATATCTGACATCAAGGGGGCAAACAGTTTGATGACTGGCAGCCAGATGTTCGCACACAAAATGTTGCTCATACCTCTACCAGGAAGACCCATGCCATCCTCTGTAAGGCTCAATGGTTCTGGTCAGAAAATGAAGAGAGCGTGGGCTCCAAACAAT CAGCAAAACAGAGATGTTACGGATTCGCTAGACTCATCCAACTACAATTCTTCTAAGCAGCAAATGTCACTCGCCATGAGCACCTTGCAGTCCTATTATGGTCTAACTCCTCAAAATGGGGCTATGACAGATGCTGGCACTGAGATGTCCTTGTACAGTAAGGGCAGTTTGGAGCGTATCAACAGTGAAACATTGGTCACTTCATCTAGATTACCAGACACACATAATACCGACAGAAGTAGGAACTCTGAAGACACGTCGAATGGCTTTTC ] [+] EMBL OSR02201A [ GATTACCAGACACACATAATACCGACAGAAGTAGGAACTCTGAAGACACGTCGAATGGCTTTTCAGCAACAAACGGTGCCAGTGGGGCCAAGATCAATGGGAC AGCCAAAGC AAAGCAAGAT GGTTCCATTCGTCGGCGGCAAAAAGTTGAAGCTGATCAAGTGTCTAACACCACAGATACCCAGGACGATGTTTTTACAGACCCAATTAAGATGACCAAGAGTTTGTTGCCAAGGCCAATTTCTAGTATCCGACAAAACATGGNCACAAGCAACCCAGAGTCCAGCCTGAAGAGCAATGGTTCATTTCTGAGCGGATTTAGATCAGTGCGGAAGTCGNCTAGCACACCAAA TTTG ] [-] EMBL OSS4328A [ ncGTTCCATTGGGCCAAAGATCAATGGGACAANCCAAACCAAAAGCAAGATGGGTTCCATTCGNCGGCGGCAAAAAGTTGAAGCTGATCAAGTGTCTAACACCACAGATACCCAGGACGATGTTTTTACAGACCCAATTAAGATGACCAAGAGTTTGTTGCCAAGGCCAATTTCTAGTATCCGACAAAACATGGACACAAGCAACCCAGAGTCCAGCCTGAAGAGCAATGGTTCATTTCTGAGCGGATTTAGATCAGTGCGGAAGTCGCCTAGCACACCAAACTTTGCAGATGCAGAGAATGGGATCTCTATGTGGTCAAGCTCGGCATGGACTTTCAACCATGAGTCGTTCACGCGACCATTGCTTGATGGCCTTCCGAAACCCACAGCACCTAGGAGGACCAAAGCTGCTTTGGATTGAGCTGCCTGTGGCTGTAGT ] [-] EMBL CF308447 [ ac TTTGCAGATGCAGAGAATGGGATCTCTATGTGGTCAAGCTCGGCATGGACTTTCAACCATGAGTCGTTCACGCGACCATTGCTTGATGGCCTTCCGAAACCCACAGCACCTAGGAGGACCAAAGCTGCTTTGGATTGAGCTGCCTGTGGCTGTAGTAGGTTTGTCTG CGAT GATCCAACTT GAATTTG CCAA GAAG AAGCCGGT GGAAAAT GGAAGTTGTGG CTTGGCTTGTTTT CAGAGTTTTTATTTTGACGG CAGTTGCACCCTTGACG CCAGCGCTGCATTCTTCATCTTACCTGTGGCAAAATGTAGAGCTCAATACTTTTCAGTGCCATGGAAGCAAGCGGTGGTTCTGGCATAGAAACTCATATATAATTGTATCAATATACATACATGTATTCTTTACTCTGTTATGTAGATGATGTGCTGGTATATAATTTAGTATAGAGTTTTGAGAAAGAGAGCAGAGAGTTTACAGACAGAGGACCTATATACGGAGTATATCCCATGCATTCTAATTGAGGCATGCAGTTGTGTGATGTCACAGCAAGTGCTACTTTAATTTGAAAAAA ] [+] EMBL AU101599 [ cCTGCCGATGGACCCAACTTGGAATTTGCCCAAGGAAGAAACCCGGTGGGAAAATGGGAAGTTGTGGCCTTGGCTTGTTTTTCCAGAGTTTTTATTTTGACGGCCAGTTGCACCCTTGACGCCCAGCGCTGCATTCTTCATCTTACCTGTGGCAAAATGTAGAGCTCAATACTTTTCAGTGCCATGGAAGCAAGCGGTGGTTCTGGCATAGAAACTCATATATAATTGTATCAATATACATACATGTATTCTTTACTCTGTTATGTAGATGATGTGCTGGTATATAATTTAGTATAGAGTTTTGAGAAAGAGAGCAGAGAGTTTACAGACAGAGGACCTATATACGGAGTATATCCCATGCATTCTAATTGAGGCATGCAGTTGTGTGATGTCACAGCAAGTGCTACTCTAATTTGATAAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||