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Oryza sativa
cluster # 9608 cluster # 9608       Sequences # 6       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9608#0 length = 1636 sequences # 3  
consensus_9608#1 length = 1233 sequences # 3  

consensusID : consensus_9608#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1636
fasta sequence
                              [TTTTTTTTTTTATTCACTTATTACTTCATTGAATCCAAATTATGTGCAGAAACACACATATTTTAACACAACGAATTGAACAAGACCGATCGATCAGATGTACAAACAGAAAACTGGCAAACCCAACGAATCACTCCTTTGCAATTTATATACGTGTCAACACACACATTTTCAATCGATCGTGTATACACAATCTACAAATGGTCCGTAGTCGTCGCCGTCGTAGTGCCATTTTTCTCAGTTGAAGACGTCACACTGCTTCCGGATGTTGCCCTTGCCGCCGGACTTGACCCCGACGCGGCCGAGCTTGACGATGGCGTCGGCGAAGGCCTTGTAGAAGTCCGGCGTGCTGGCCGCCAGCGAGTCCACCGTCGGCCGCGTGCGGTTGTCGGTGTAGAGCAGCTCGTCGGAGGCGAGCAAGCCGCCGCCGTCCTGCAGGTTCCGGTAGTACTGGTTTGTCGAAGAGCGCCGGCGTGGCCTGGTCCATGAGCACCATCATGT-CGG-CCG-CGTC-GGGCACTTTGCCCCTTGAGTGAACGCCGCGTAACTTTCTCGTTCAAGCGTCCGGTCCCGTCGGTTGCCGACGGCGGGTTGTAGCGGTACAGCCGGTCCGAGAACTTGCTGCAGTGCGCCAGCCCGACGCTGTGCGCCGCTGCATGCGTACACCGAGTCCGGTCAGTCATTGCGTCGAACACATGGCGGGGGATGCATTGGTTTGTATAGTATAGTGTGTGTCTATGTCGCACCTGAGAGCGCGACCATGTCAGACATGTTGAGGCCGTTGGATTTGAAGATGGCGACGAGCTCGCTGAGGGTGTTGTTCGGCTGCGGCAGCTTGCCGGCGACGTTGCTGGCGCTGGACCTCATGCCGTCCAGCCTGCCCAGCTCCACCGGGAAGAATGGCCCACCGCTCTGCACGAATCTTGCAGTGTTTGGCATAACCGGTTACTTCTAGAGCGTGTGCGAGTTGGTGTAGCGCGTAGCGTACCAGGGCGATGGCGTCGCGCGTGGCGATGGCGAGCACGTCGGTGCAGGAGACCTGGTCGGGGCACGCGGCCTCGACGGCGGCCTTGGCGCTCCTCACCGTCTCGAATCCCTCGAACGCCAGCGAGAGGTTGTCGGGCGCGTCCCTCTCCGCCGTGTTGCCCGCCGTCGACGTGATCAGCACCGAGCCGTCACACCCCTGCACGCCACGCCACGCCACGCCGCACACACGACGTCAGTCAATCGAGATCGCCATGCTTGACACATCGCCGATTAATCAATCAAGCAAAGTGTTTGTACATCGACGAAGCAGTCGTGGAAGAAGAGGCGGACGGTGGAGCCGATGGTGCGGATGGTGGCCTGCATCTTGTCCTTCACCACGCCGAGCACGATGCTCTCGACGTTGGGGCACGTGCTGTTGTAGTAGTCCGTCCTCAGGTCGGACGCGCCGAGCTGCGCCACGGCGGCGACGACGAGCAGCGCCATCCACCACGACGACGACGGCCGAGCCATCTTGTTAAACCTCTTGGCATGCATAAGTGGTGAAAGACTTCACTTTTGGGGAGATTTATATGGTGGTTAACAGGAGAAGTGCGACGAACAAGTTTTCGTTGAAAAAAAAAGTGATGATCAAGTGTGGTGTGCAAGATTTTGT]

[-] EMBL AU166264             [TTTTTTTTTTTATTCACTTATTACTTCATTGAATCCAAATTATGTGCAGAAACACACATATTTTAACACAACGAATTGAACAAGACCGATCGATCAGATGTACAAACAGAAAACTGGCAAACCCAACGAATCACTCCTTTGCAATTTATATACGTGTCAACACACACATTTTCAATCGATCGTGTATACACAATCTACAAATGGTCCGTAGTCGTCGCCGTCGTAGTGCCATTTTTCTCAGTTGAAGACGTCACACTGCTTCCGGATGTTGCCCTTGCCGCCGGACTTGACCCCGACGCGGCCGAGCTTGACGATGGCGTCGGCGAAGGCCTTGTAGAAGTCCGGCGTGCTGGCCGCCAGCGAGTCCACCGTCGGCCGCGTGCGGTTGTCGGTGTAGAGCAGCTCGTCGGAGGCGAGCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL BI811329             [                                         tttTGCAGAAACACACATATTTTAACACAACGAATTGAACAAGACCGATCGATC GATGTACAAACAGAAAACTGGCAAACCCAACGAATCACTCCTTTGCAATTTATATACGTGTCAACACACACATTTTCAATCGATCGTGTATACACAATCTACAAATGGTCCGTAGTCGTCGCCGTCGTAGTGCCATTTTTCTCAGTTGAAGACGTCACACTGCTTCCGGATGTTGCCCTTGCCGCCGGACTTGACCCCGACGCGGCCGAGCTTGACGATGGCGTCGGCGAAGGCCTTGTAGAAGTCCGGCGTGCTGGCCGCCAGCGAGTCCACCGTCGGCCGCGTGCGGTTGTCGGTGTAGAGCAGCTCGTCGGAGGCGAGCAAGCCGCCGCCGTCCTGCAGGTTCCGGTAGTACTGGTTTGTCGAAGAGCGCCGGCGTGGCCTGGTCCATGAGCACCATCATGT CGG CCG CGTC GGGCACTTTGCCCCTTGAGTGAACGCCGCGTAACTTTCTCGTTCAAGCGTCCGGTCCCGTCGGTTGCCGAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL AK107203             [                                                                                                                                                                                      TGTATACACAATCTACAAATGGTCCGTAGTCGTCGCCGTCGTAGTGCCATTTTTCTCAGTTGAAGACGTCACACTGCTTCCGGATGTTGCCCTTGCCGCCGGACTTGACCCCGACGCGGCCGAGCTTGACGATGGCGTCGGCGAAGGCCTTGTAGAAGTCCGGCGTGCTGGCCGCCAGCGAGTCCACCGTCGGCCGCGTGCGGTTGTCGGTGTAGAGCAGCTCGTCGGAGGCGAGCAAGCCGCCGCCGTCCTGCAGGTTCCGGTAGTACTGG TTGTCGAAGAGCGCCGGCGTGGCCTGGTCCATGAGCACCATCATGTCCGGCCCGCCGTCGGGGCAC TTG CCCTTGAG GAACGCCGCGT AC TTCTCGTTC AGCGTCGGGT CCGTCGGCTG CGACGGCGGGTTGTAGCGGTACAGCCGGTCCGAGAACTTGCTGCAGTGCGCCAGCCCGACGCTGTGCGCCGCTGCATGCGTACACCGAGTCCGGTCAGTCATTGCGTCGAACACATGGCGGGGGATGCATTGGTTTGTATAGTATAGTGTGTGTCTATGTCGCACCTGAGAGCGCGACCATGTCAGACATGTTGAGGCCGTTGGATTTGAAGATGGCGACGAGCTCGCTGAGGGTGTTGTTCGGCTGCGGCAGCTTGCCGGCGACGTTGCTGGCGCTGGACCTCATGCCGTCCAGCCTGCCCAGCTCCACCGGGAAGAATGGCCCACCGCTCTGCACGAATCTTGCAGTGTTTGGCATAACCGGTTACTTCTAGAGCGTGTGCGAGTTGGTGTAGCGCGTAGCGTACCAGGGCGATGGCGTCGCGCGTGGCGATGGCGAGCACGTCGGTGCAGGAGACCTGGTCGGGGCACGCGGCCTCGACGGCGGCCTTGGCGCTCCTCACCGTCTCGAATCCCTCGAACGCCAGCGAGAGGTTGTCGGGCGCGTCCCTCTCCGCCGTGTTGCCCGCCGTCGACGTGATCAGCACCGAGCCGTCACACCCCTGCACGCCACGCCACGCCACGCCGCACACACGACGTCAGTCAATCGAGATCGCCATGCTTGACACATCGCCGATTAATCAATCAAGCAAAGTGTTTGTACATCGACGAAGCAGTCGTGGAAGAAGAGGCGGACGGTGGAGCCGATGGTGCGGATGGTGGCCTGCATCTTGTCCTTCACCACGCCGAGCACGATGCTCTCGACGTTGGGGCACGTGCTGTTGTAGTAGTCCGTCCTCAGGTCGGACGCGCCGAGCTGCGCCACGGCGGCGACGACGAGCAGCGCCATCCACCACGACGACGACGGCCGAGCCATCTTGTTAAACCTCTTGGCATGCATAAGTGGTGAAAGACTTCACTTTTGGGGAGATTTATATGGTGGTTAACAGGAGAAGTGCGACGAACAAGTTTTCGTTGAAAAAAAAAGTGATGATCAAGTGTGGTGTGCAAGATTTTGT]


>consensus_9608#0 TTTTTTTTTTTATTCACTTATTACTTCATTGAATCCAAATTATGTGCAGAAACACACATA TTTTAACACAACGAATTGAACAAGACCGATCGATCAGATGTACAAACAGAAAACTGGCAA ACCCAACGAATCACTCCTTTGCAATTTATATACGTGTCAACACACACATTTTCAATCGAT CGTGTATACACAATCTACAAATGGTCCGTAGTCGTCGCCGTCGTAGTGCCATTTTTCTCA GTTGAAGACGTCACACTGCTTCCGGATGTTGCCCTTGCCGCCGGACTTGACCCCGACGCG GCCGAGCTTGACGATGGCGTCGGCGAAGGCCTTGTAGAAGTCCGGCGTGCTGGCCGCCAG CGAGTCCACCGTCGGCCGCGTGCGGTTGTCGGTGTAGAGCAGCTCGTCGGAGGCGAGCAA GCCGCCGCCGTCCTGCAGGTTCCGGTAGTACTGGTTTGTCGAAGAGCGCCGGCGTGGCCT GGTCCATGAGCACCATCATGTCGGCCGCGTCGGGCACTTTGCCCCTTGAGTGAACGCCGC GTAACTTTCTCGTTCAAGCGTCCGGTCCCGTCGGTTGCCGACGGCGGGTTGTAGCGGTAC AGCCGGTCCGAGAACTTGCTGCAGTGCGCCAGCCCGACGCTGTGCGCCGCTGCATGCGTA CACCGAGTCCGGTCAGTCATTGCGTCGAACACATGGCGGGGGATGCATTGGTTTGTATAG TATAGTGTGTGTCTATGTCGCACCTGAGAGCGCGACCATGTCAGACATGTTGAGGCCGTT GGATTTGAAGATGGCGACGAGCTCGCTGAGGGTGTTGTTCGGCTGCGGCAGCTTGCCGGC GACGTTGCTGGCGCTGGACCTCATGCCGTCCAGCCTGCCCAGCTCCACCGGGAAGAATGG CCCACCGCTCTGCACGAATCTTGCAGTGTTTGGCATAACCGGTTACTTCTAGAGCGTGTG CGAGTTGGTGTAGCGCGTAGCGTACCAGGGCGATGGCGTCGCGCGTGGCGATGGCGAGCA CGTCGGTGCAGGAGACCTGGTCGGGGCACGCGGCCTCGACGGCGGCCTTGGCGCTCCTCA CCGTCTCGAATCCCTCGAACGCCAGCGAGAGGTTGTCGGGCGCGTCCCTCTCCGCCGTGT TGCCCGCCGTCGACGTGATCAGCACCGAGCCGTCACACCCCTGCACGCCACGCCACGCCA CGCCGCACACACGACGTCAGTCAATCGAGATCGCCATGCTTGACACATCGCCGATTAATC AATCAAGCAAAGTGTTTGTACATCGACGAAGCAGTCGTGGAAGAAGAGGCGGACGGTGGA GCCGATGGTGCGGATGGTGGCCTGCATCTTGTCCTTCACCACGCCGAGCACGATGCTCTC GACGTTGGGGCACGTGCTGTTGTAGTAGTCCGTCCTCAGGTCGGACGCGCCGAGCTGCGC CACGGCGGCGACGACGAGCAGCGCCATCCACCACGACGACGACGGCCGAGCCATCTTGTT AAACCTCTTGGCATGCATAAGTGGTGAAAGACTTCACTTTTGGGGAGATTTATATGGTGG TTAACAGGAGAAGTGCGACGAACAAGTTTTCGTTGAAAAAAAAAGTGATGATCAAGTGTG GTGTGCAAGATTTTGT



consensusID : consensus_9608#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1233
fasta sequence
                              [TAGTATTTATTCACTTATTACTTCATTGAATCCAAATTATGTGCAGAAACACACATATTTTAACACAACGAATTGAACAAGACCGATCGATCGATGTACAAACAGAAAACTGGCAAACCCAACGAATCACTCCTTTGCAATTTATATACGTGTCAACACACACATTTTCAATCGATCGTGTATACACAATCTACAAATGGTCCGTAGTCGTCGCCGTCGTAGTGCCATTTTTCTCAGTTGAAGACGTCACACTGCTTCCGGATGTTGCCCTTGCCGCCGGACTTGACCCCGACGCGGCCGAGCTTGACGATGGCGTCGGCGAAGGCCTTGTAGAAGTCCGGCGTGCTGGCCGCCAGCGAGTCCACCGTCGGCCGCGTGCGGTTGTCGGTGTAGAGCAGCTCGTCGGAGGCGAGCAAGCCGCCGCCGTCCTGCAGGTTCCGGTAGTACTGGTTGTCGAAGAGCGCCGGCGTGGCCTGGTCCATGAGCACCATCATGTCCGGCCCGCCGTCGGGGCACTTGCCCTTGAGGAACGCCGCGTACTTCTCGTTCAGCGTCGGGTCCGTCGGCTGCGACGGCGGGTTGTAGCGGTACAGCCGGTCCGAGAACTTGCTGCAGTGCGCCAGCCCGACGCTGTGCGCCGCTGAGAGCGCGACCATGTCAGACATGTTGAGGCCGTTGGATTTGAAGATGGCGACGAGCTCGCTGAGGGTGTTGTTCGGCTGCGGCAGCTTGCCGGCGACGTTGCTGGCGCTGGACCTCATGCCGTCCAGCCTGCCCAGCTCCACCGGGAAGAATGGCCCACCGCTCAGGGCGATGGCGTCGCGCGTGGCGATGGCGAGCACGTCGGTGCAGGAGACCTGGTCGGGGCACGCGGCCTCGACGGCGGCCTTGGCGCTCCTCACCGTCTCGAATCCCTCGAACGCCAGCGAGAGGTTGTCGGGCGCGTCCCTCTCCGCCGTGTTGCCCGCCGTCGACGTGATCAGCACCGAGCCGTCACACCCATCGACGAAGCAGTCGTGGAAGAAGAGGCGGACGGTGGAGCCGATGGTGCGGATGGTGGCCTGCATCTTGTCCTTCACCACGCCGAGCACGATGCTCTCGACGTTGGGGCACGTGCTGTTGTAGTAGTCCGTCCTCAGGTCGGACGCGCCGAGCTGCGCCACGGCGGCGACGACGAGCAGCGCCATCCACCACGACGACGACGGCCGAGCCATCTTGTTAAACCTCTTGGCA]

[-] EMBL AK058884             [TAGTATTTATTCACTTATTACTTCATTGAATCCAAATTATGTGCAGAAACACACATATTTTAACACAACGAATTGAACAAGACCGATCGATCGATGTACAAACAGAAAACTGGCAAACCCAACGAATCACTCCTTTGCAATTTATATACGTGTCAACACACACATTTTCAATCGATCGTGTATACACAATCTACAAATGGTCCGTAGTCGTCGCCGTCGTAGTGCCATTTTTCTCAGTTGAAGACGTCACACTGCTTCCGGATGTTGCCCTTGCCGCCGGACTTGACCCCGACGCGGCCGAGCTTGACGATGGCGTCGGCGAAGGCCTTGTAGAAGTCCGGCGTGCTGGCCGCCAGCGAGTCCACCGTCGGCCGCGTGCGGTTGTCGGTGTAGAGCAGCTCGTCGGAGGCGAGCAAGCCGCCGCCGTCCTGCAGGTTCCGGTAGTACTGGTTGTCGAAGAGCGCCGGCGTGGCCTGGTCCATGAGCACCATCATGTCCGGCCCGCCGTCGGGGCACTTGCCCTTGAGGAACGCCGCGTACTTCTCGTTCAGCGTCGGGTCCGTCGGCTGCGACGGCGGGTTGTAGCGGTACAGCCGGTCCGAGAACTTGCTGCAGTGCGCCAGCCCGACGCTGTGCGCCGCTGAGAGCGCGACCATGTCAGACATGTTGAGGCCGTTGGATTTGAAGATGGCGACGAGCTCGCTGAGGGTGTTGTTCGGCTGCGGCAGCTTGCCGGCGACGTTGCTGGCGCTGGACCTCATGCCGTCCAGCCTGCCCAGCTCCACCGGGAAGAATGGCCCACCGCTCAGGGCGATGGCGTCGCGCGTGGCGATGGCGAGCACGTCGGTGCAGGAGACCTGGTCGGGGCACGCGGCCTCGACGGCGGCCTTGGCGCTCCTCACCGTCTCGAATCCCTCGAACGCCAGCGAGAGGTTGTCGGGCGCGTCCCTCTCCGCCGTGTTGCCCGCCGTCGACGTGATCAGCACCGAGCCGTCACACCCATCGACGAAGCAGTCGTGGAAGAAGAGGCGGACGGTGGAGCCGATGGTGCGGATGGTGGCCTGCATCTTGTCCTTCACCACGCC                                                                                                                                                    ]
[-] EMBL AK060007             [                  TACTTCATTGAATCCAAATTATGTGCAGAAACACACATATTTTAACACAACGAATTGAACAAGACCGATCGATCGATGTACAAACAGAAAACTGGCAAACCCAACGAATCACTCCTTTGCAATTTATATACGTGTCAACACACACATTTTCAATCGATCGTGTATACACAATCTACAAATGGTCCGTAGTCGTCGCCGTCGTAGTGCCATTTTTCTCAGTTGAAGACGTCACACTGCTTCCGGATGTTGCCCTTGCCGCCGGACTTGACCCCGACGCGGCCGAGCTTGACGATGGCGTCGGCGAAGGCCTTGTAGAAGTCCGGCGTGCTGGCCGCCAGCGAGTCCACCGTCGGCCGCGTGCGGTTGTCGGTGTAGAGCAGCTCGTCGGAGGCGAGCAAGCCGCCGCCGTCCTGCAGGTTCCGGTAGTACTGGTTGTCGAAGAGCGCCGGCGTGGCCTGGTCCATGAGCACCATCATGTCCGGCCCGCCGTCGGGGCACTTGCCCTTGAGGAACGCCGCGTACTTCTCGTTCAGCGTCGGGTCCGTCGGCTGCGACGGCGGGTTGTAGCGGTACAGCCGGTCCGAGAACTTGCTGCAGTGCGCCAGCCCGACGCTGTGCGCCGCTGAGAGCGCGACCATGTCAGACATGTTGAGGCCGTTGGATTTGAAGATGGCGACGAGCTCGCTGAGGGTGTTGTTCGGCTGCGGCAGCTTGCCGGCGACGTTGCTGGCGCTGGACCTCATGCCGTCCAGCCTGCCCAGCTCCACCGGGAAGAATGGCCCACCGCTCAGGGCGATGGCGTCGCGCGTGGCGATGGCGAGCACGTCGGTGCAGGAGACCTGGTCGGGGCACGCGGCCTCGACGGCGGCCTTGGCGCTCCTCACCGTCTCGAATCCCTCGAACGCCAGCGAGAGGTTGTCGGGCGCGTCCCTCTCCGCCGTGTTGCCCGCCGTCGACGTGATCAGCACCGAGCCGTCACACCCATCGACGAAGCAGTCGTGGAAGAAGAGGCGGACGGTGGAGCCGATGGTGCGGATGGTGGCCTGCATCTTGTCCTTCACCACGCCGAGCACGATGCTCTCGACGTTGGGGCACGTGCTGTTGTAGTAGTCCGTCCTCAGGTCGGACGCGCCGAGCTGCGCCACGGCGGCGACGACGAGCAGCGCCATCCACCACGACGACGACGGCCGAGCCATCTTGTTAAACCTCTTGGCA]
[-] EMBL AK104448             [                  TACTTCATTGAATCCAAATTATGTGCAGAAACACACATATTTTAACACAACGAATTGAACAAGACCGATCGATCGATGTACAAACAGAAAACTGGCAAACCCAACGAATCACTCCTTTGCAATTTATATACGTGTCAACACACACATTTTCAATCGATCGTGTATACACAATCTACAAATGGTCCGTAGTCGTCGCCGTCGTAGTGCCATTTTTCTCAGTTGAAGACGTCACACTGCTTCCGGATGTTGCCCTTGCCGCCGGACTTGACCCCGACGCGGCCGAGCTTGACGATGGCGTCGGCGAAGGCCTTGTAGAAGTCCGGCGTGCTGGCCGCCAGCGAGTCCACCGTCGGCCGCGTGCGGTTGTCGGTGTAGAGCAGCTCGTCGGAGGCGAGCAAGCCGCCGCCGTCCTGCAGGTTCCGGTAGTACTGGTTGTCGAAGAGCGCCGGCGTGGCCTGGTCCATGAGCACCATCATGTCCGGCCCGCCGTCGGGGCACTTGCCCTTGAGGAACGCCGCGTACTTCTCGTTCAGCGTCGGGTCCGTCGGCTGCGACGGCGGGTTGTAGCGGTACAGCCGGTCCGAGAACTTGCTGCAGTGCGCCAGCCCGACGCTGTGCGCCGCTGAGAGCGCGACCATGTCAGACATGTTGAGGCCGTTGGATTTGAAGATGGCGACGAGCTCGCTGAGGGTGTTGTTCGGCTGCGGCAGCTTGCCGGCGACGTTGCTGGCGCTGGACCTCATGCCGTCCAGCCTGCCCAGCTCCACCGGGAAGAATGGCCCACCGCTCAGGGCGATGGCGTCGCGCGTGGCGATGGCGAGCACGTCGGTGCAGGAGACCTGGTCGGGGCACGCGGCCTCGACGGCGGCCTTGGCGCTCCTCACCGTCTCGAATCCCTCGAACGCCAGCGAGAGGTTGTCGGGCGCGTCCCTCTCCGCCGTGTTGCCCGCCGTCGACGTGATCAGCACCGAGCCGTCACACCCATCGACGAAGCAGTCGTGGAAGAAGAGGCGGACGGTGGAGCCGATGGTGCGGATGGTGGCCTGCATCTTGTCCTTCACCACGCCGAGCACGATGCTCTCGACGTTGGGGCACGTGCTGTTGTAGTAGTCCGTCCTCAGGTCGGACGCGCCGAGCTGCGCCACGGCGGCGACGACGAGCAGCGCCATCCACCACGACGACGACGGCCGAGCCATCTTGTTAAACCTCTT    ]


>consensus_9608#1 TAGTATTTATTCACTTATTACTTCATTGAATCCAAATTATGTGCAGAAACACACATATTT TAACACAACGAATTGAACAAGACCGATCGATCGATGTACAAACAGAAAACTGGCAAACCC AACGAATCACTCCTTTGCAATTTATATACGTGTCAACACACACATTTTCAATCGATCGTG TATACACAATCTACAAATGGTCCGTAGTCGTCGCCGTCGTAGTGCCATTTTTCTCAGTTG AAGACGTCACACTGCTTCCGGATGTTGCCCTTGCCGCCGGACTTGACCCCGACGCGGCCG AGCTTGACGATGGCGTCGGCGAAGGCCTTGTAGAAGTCCGGCGTGCTGGCCGCCAGCGAG TCCACCGTCGGCCGCGTGCGGTTGTCGGTGTAGAGCAGCTCGTCGGAGGCGAGCAAGCCG CCGCCGTCCTGCAGGTTCCGGTAGTACTGGTTGTCGAAGAGCGCCGGCGTGGCCTGGTCC ATGAGCACCATCATGTCCGGCCCGCCGTCGGGGCACTTGCCCTTGAGGAACGCCGCGTAC TTCTCGTTCAGCGTCGGGTCCGTCGGCTGCGACGGCGGGTTGTAGCGGTACAGCCGGTCC GAGAACTTGCTGCAGTGCGCCAGCCCGACGCTGTGCGCCGCTGAGAGCGCGACCATGTCA GACATGTTGAGGCCGTTGGATTTGAAGATGGCGACGAGCTCGCTGAGGGTGTTGTTCGGC TGCGGCAGCTTGCCGGCGACGTTGCTGGCGCTGGACCTCATGCCGTCCAGCCTGCCCAGC TCCACCGGGAAGAATGGCCCACCGCTCAGGGCGATGGCGTCGCGCGTGGCGATGGCGAGC ACGTCGGTGCAGGAGACCTGGTCGGGGCACGCGGCCTCGACGGCGGCCTTGGCGCTCCTC ACCGTCTCGAATCCCTCGAACGCCAGCGAGAGGTTGTCGGGCGCGTCCCTCTCCGCCGTG TTGCCCGCCGTCGACGTGATCAGCACCGAGCCGTCACACCCATCGACGAAGCAGTCGTGG AAGAAGAGGCGGACGGTGGAGCCGATGGTGCGGATGGTGGCCTGCATCTTGTCCTTCACC ACGCCGAGCACGATGCTCTCGACGTTGGGGCACGTGCTGTTGTAGTAGTCCGTCCTCAGG TCGGACGCGCCGAGCTGCGCCACGGCGGCGACGACGAGCAGCGCCATCCACCACGACGAC GACGGCCGAGCCATCTTGTTAAACCTCTTGGCA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9608#0      TTTTTTTTTTTATTCACTTATTACTTCATTGAATCCAAATTATGTGCAGAAACACACATA 60
consensus_9608#1      ---TAGTATTTATTCACTTATTACTTCATTGAATCCAAATTATGTGCAGAAACACACATA 57
                         *  * ****************************************************

consensus_9608#0      TTTTAACACAACGAATTGAACAAGACCGATCGATCAGATGTACAAACAGAAAACTGGCAA 120
consensus_9608#1      TTTTAACACAACGAATTGAACAAGACCGATCGATC-GATGTACAAACAGAAAACTGGCAA 116
                      *********************************** ************************

consensus_9608#0      ACCCAACGAATCACTCCTTTGCAATTTATATACGTGTCAACACACACATTTTCAATCGAT 180
consensus_9608#1      ACCCAACGAATCACTCCTTTGCAATTTATATACGTGTCAACACACACATTTTCAATCGAT 176
                      ************************************************************

consensus_9608#0      CGTGTATACACAATCTACAAATGGTCCGTAGTCGTCGCCGTCGTAGTGCCATTTTTCTCA 240
consensus_9608#1      CGTGTATACACAATCTACAAATGGTCCGTAGTCGTCGCCGTCGTAGTGCCATTTTTCTCA 236
                      ************************************************************

consensus_9608#0      GTTGAAGACGTCACACTGCTTCCGGATGTTGCCCTTGCCGCCGGACTTGACCCCGACGCG 300
consensus_9608#1      GTTGAAGACGTCACACTGCTTCCGGATGTTGCCCTTGCCGCCGGACTTGACCCCGACGCG 296
                      ************************************************************

consensus_9608#0      GCCGAGCTTGACGATGGCGTCGGCGAAGGCCTTGTAGAAGTCCGGCGTGCTGGCCGCCAG 360
consensus_9608#1      GCCGAGCTTGACGATGGCGTCGGCGAAGGCCTTGTAGAAGTCCGGCGTGCTGGCCGCCAG 356
                      ************************************************************

consensus_9608#0      CGAGTCCACCGTCGGCCGCGTGCGGTTGTCGGTGTAGAGCAGCTCGTCGGAGGCGAGCAA 420
consensus_9608#1      CGAGTCCACCGTCGGCCGCGTGCGGTTGTCGGTGTAGAGCAGCTCGTCGGAGGCGAGCAA 416
                      ************************************************************

consensus_9608#0      GCCGCCGCCGTCCTGCAGGTTCCGGTAGTACTGGTTTGTCGAAGAGCGCCGGCGTGGCCT 480
consensus_9608#1      GCCGCCGCCGTCCTGCAGGTTCCGGTAGTACTGGTT-GTCGAAGAGCGCCGGCGTGGCCT 475
                      ************************************ ***********************

consensus_9608#0      GGTCCATGAGCACCATCATGTCGGCCGCGTCG--GGCACTTTGCCCCTTGAGTGAACGCC 538
consensus_9608#1      GGTCCATGAGCACCATCATGTCCGGCCCGCCGTCGGGGCACTTGCCCTTGAG-GAACGCC 534
                      ********************** * * ** **  **  *  *  ******** *******

consensus_9608#0      GCGTAACTTTCTCGTTCAAGCGTCCGGTCCCGTCGGTTGCCGACGGCGGGTTGTAGCGGT 598
consensus_9608#1      GCGTA--CTTCTCGTTCA-GCGTCGGGTCC-GTCGGCTGC-GACGGCGGGTTGTAGCGGT 589
                      *****   ********** ***** ***** ***** *** *******************

consensus_9608#0      ACAGCCGGTCCGAGAACTTGCTGCAGTGCGCCAGCCCGACGCTGTGCGCCGCTGCATGCG 658
consensus_9608#1      ACAGCCGGTCCGAGAACTTGCTGCAGTGCGCCAGCCCGACGCTGTGCGCCGCTG------ 643
                      ******************************************************      

consensus_9608#0      TACACCGAGTCCGGTCAGTCATTGCGTCGAACACATGGCGGGGGATGCATTGGTTTGTAT 718
consensus_9608#1      ------------------------------------------------------------
                                                                                  

consensus_9608#0      AGTATAGTGTGTGTCTATGTCGCACCTGAGAGCGCGACCATGTCAGACATGTTGAGGCCG 778
consensus_9608#1      ----------------------------AGAGCGCGACCATGTCAGACATGTTGAGGCCG 675
                                                  ********************************

consensus_9608#0      TTGGATTTGAAGATGGCGACGAGCTCGCTGAGGGTGTTGTTCGGCTGCGGCAGCTTGCCG 838
consensus_9608#1      TTGGATTTGAAGATGGCGACGAGCTCGCTGAGGGTGTTGTTCGGCTGCGGCAGCTTGCCG 735
                      ************************************************************

consensus_9608#0      GCGACGTTGCTGGCGCTGGACCTCATGCCGTCCAGCCTGCCCAGCTCCACCGGGAAGAAT 898
consensus_9608#1      GCGACGTTGCTGGCGCTGGACCTCATGCCGTCCAGCCTGCCCAGCTCCACCGGGAAGAAT 795
                      ************************************************************

consensus_9608#0      GGCCCACCGCTCTGCACGAATCTTGCAGTGTTTGGCATAACCGGTTACTTCTAGAGCGTG 958
consensus_9608#1      GGCCCACCGCTC------------------------------------------------ 807
                      ************                                                

consensus_9608#0      TGCGAGTTGGTGTAGCGCGTAGCGTACCAGGGCGATGGCGTCGCGCGTGGCGATGGCGAG 1018
consensus_9608#1      ----------------------------AGGGCGATGGCGTCGCGCGTGGCGATGGCGAG 839
                                                  ********************************

consensus_9608#0      CACGTCGGTGCAGGAGACCTGGTCGGGGCACGCGGCCTCGACGGCGGCCTTGGCGCTCCT 1078
consensus_9608#1      CACGTCGGTGCAGGAGACCTGGTCGGGGCACGCGGCCTCGACGGCGGCCTTGGCGCTCCT 899
                      ************************************************************

consensus_9608#0      CACCGTCTCGAATCCCTCGAACGCCAGCGAGAGGTTGTCGGGCGCGTCCCTCTCCGCCGT 1138
consensus_9608#1      CACCGTCTCGAATCCCTCGAACGCCAGCGAGAGGTTGTCGGGCGCGTCCCTCTCCGCCGT 959
                      ************************************************************

consensus_9608#0      GTTGCCCGCCGTCGACGTGATCAGCACCGAGCCGTCACACCCCTGCACGCCACGCCACGC 1198
consensus_9608#1      GTTGCCCGCCGTCGACGTGATCAGCACCGAGCCGTCACACCC------------------ 1001
                      ******************************************                  

consensus_9608#0      CACGCCGCACACACGACGTCAGTCAATCGAGATCGCCATGCTTGACACATCGCCGATTAA 1258
consensus_9608#1      ------------------------------------------------------------
                                                                                  

consensus_9608#0      TCAATCAAGCAAAGTGTTTGTACATCGACGAAGCAGTCGTGGAAGAAGAGGCGGACGGTG 1318
consensus_9608#1      -----------------------ATCGACGAAGCAGTCGTGGAAGAAGAGGCGGACGGTG 1038
                                             *************************************

consensus_9608#0      GAGCCGATGGTGCGGATGGTGGCCTGCATCTTGTCCTTCACCACGCCGAGCACGATGCTC 1378
consensus_9608#1      GAGCCGATGGTGCGGATGGTGGCCTGCATCTTGTCCTTCACCACGCCGAGCACGATGCTC 1098
                      ************************************************************

consensus_9608#0      TCGACGTTGGGGCACGTGCTGTTGTAGTAGTCCGTCCTCAGGTCGGACGCGCCGAGCTGC 1438
consensus_9608#1      TCGACGTTGGGGCACGTGCTGTTGTAGTAGTCCGTCCTCAGGTCGGACGCGCCGAGCTGC 1158
                      ************************************************************

consensus_9608#0      GCCACGGCGGCGACGACGAGCAGCGCCATCCACCACGACGACGACGGCCGAGCCATCTTG 1498
consensus_9608#1      GCCACGGCGGCGACGACGAGCAGCGCCATCCACCACGACGACGACGGCCGAGCCATCTTG 1218
                      ************************************************************

consensus_9608#0      TTAAACCTCTTGGCATGCATAAGTGGTGAAAGACTTCACTTTTGGGGAGATTTATATGGT 1558
consensus_9608#1      TTAAACCTCTTGGCA--------------------------------------------- 1233
                      ***************                                             

consensus_9608#0      GGTTAACAGGAGAAGTGCGACGAACAAGTTTTCGTTGAAAAAAAAAGTGATGATCAAGTG 1618
consensus_9608#1      ------------------------------------------------------------
                                                                                  

consensus_9608#0      TGGTGTGCAAGATTTTGT 1636
consensus_9608#1      ------------------
                                        




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)