cluster # 9620

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Oryza sativa
cluster # 9620 cluster # 9620 Sequences # 6 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9620#0 length = 518 sequences # 6

consensusID : consensus_9620#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 518
fasta sequence

                              [CCNCNATCTTCCACTCCCCCACCCACGCCGCCGACGATGCCACAGCAGCACCCACAGCCGCCGGCCGGCTCGCGCCTCCTCGACGCCGTCCCGCTCTTCGTCGTCGTCCTCCTCGCCGCCCACGTCCTAGCCCTCGTGTACTGGATGTACAGGTTAGCCTCGGACAAGCAGCCGCCGCGGAGGAAGACGCAGTAGCCACCACCACCACGGGCCCCGACGGCTTCGTGCTCGCCTTTGTGTAGCCGATCAAATCGTGAGCTGCGTGAGCAAGATTTTACCTCTAGAAAGCTTAGGTTGTTCATTATTGTTGCAGAGTTTGTGTTTCCGTTTG-TTTTAT-GGTACCAGTGACA--TTTGGTATATAA-TCAAGAAGAATT-AGT-GGAGGACTT-GTTGTATGAATTGCCTTGGGTTCTTTTTAATATGAGAATTCCATAATTGTTCTGTGACAAAAAATCGTCAGTGGCTTTACTTGTTTCTCACAAATCAATTACCAGACTCTTGATCGATTAAACCGTTCAGTT]

[+] EMBL C29182               [CCNCNATCTTCCACTCCCCCACCCACGCCGCCGACGATGCCACAGCAGCACCCACAGCCGCCGGCCGGCTCGCGCNTCCTCGACGCCGTCCCGCTCTTCGTNGTCGTCCTCCTCGCCGCCCACGTCCTAGCCCTCGTNTACTGGATGTACAGGTTAGCCTCGGACAAGCAGCCGCCGCGGAGGAAGACGCAGTAGCCACCACCACCACGGGCCCCGACGGCTTCGTGCTCGCTTTTNTGTAGCCGATCAAATCGTGAGCTGCGTGA NAAGATTTTACCTCTAGAAAGCTTAGGTTGTTNATTATTGTTGCAGAGTTTGTGTTTCCGNTTGTTTTTATGGGTACCAGTNACAATTTTGGTATATAANTAAAGAAGAATTAAGTGGGAGGACTTNGTTG                                                                                                                                ]
[+] EMBL AK063739             [ ctcgATCTTCCACTCCCCCACCCACGCCGCCGACGATGCCACAGCAGCACCCACAGCCGCCGGCCGGCTCGCGCCTCCTCGACGCCGTCCCGCTCTTCGTCGTCGTCCTCCTCGCCGCCCACGTCCTAGCCCTCGTGTACTGGATGTACAGGTTAGCCTCGGACAAGCAGCCGCCGCGGAGGAAGACGCAGTAGCCACCACCACCACGGGCCCCGACGGCTTCGTGCTCGCCTTTGTGTAGCCGATCAAATCGTGAGCTGCGTGAGCAAGATTTTACCTCTAGAAAGCTTAGGTTGTTCATTATTGTTGCAGAGTTTGTGTTTCCGTTTG TTTTAT GGTACCAGTGACA  TTTGGTATATAA TCAAGAAGAATT AGT GGAGGACTT GTTGTATGAATTGCCTTGGGTTCTTTTTAATATGAGAATTCCATAATTGTTCTGTGACAGGGAGTCGTCAGTGGCTTTACTTGTTTCTCACAAATCAATTACCAGACTCTTGATCGATTAAACCGTTCAGTT]
[+] EMBL BE230058             [        TTCCACTCCCCCACCCACGCCGCCGACGATGCCACAGCAGCACCCACAGCCGCCGGCCGGCTCGCGCCTCCTCGACGCCGTCCCGCTCTTCGTCGTCGTCCTCCTCGCCGCCCACGTCCTAGCCCTCGTGTACTGGATGTACAGGTTAGCCTCGGACAAGCAGCCGCCGCGGAGGAAGACGCAGTAGCCACCACCACCACGGGCCCCGACGGCTTTGTGCTCGCCTTTGTGTAGCCGATCAAATCGTGAGCTGCGTGAGCAAGATTTTACCTCTAGAAAGCTTACGTTGTTCATTATTGTTGCAGAGTTTGTGTTTCCGTTTG TTTTAT GGTACCAGTGACA  TTTGGTATATAA TCAAGAAGAATT AGT GGAG                                                                                                                                          ]
[+] EMBL BE230400             [         TCCACTCCCCCACCCACGCCGCCGACGATGCCACAGCAGCACCCACAGCCGCCGGCCGGCTCGCGCCTCCTCGACGCCGTCCCGCTCTTCGTCGTCGTCCTCCTCGCCGCCCACGTCCTAGCCCTCGTGTACTGGATGTACAGGTTAGCCTCGGACAAGCAGCCGCCGCGGAGGAAGACGCAGTAGCCACCACCACCACGGGCCCCGACGGCTTCGTGCTCGCCTTTGTGTAGCCGATCAAATCGTGAGCTGCGTGAGCAAGATTTTACCTCTAGAAAGCTTAGGTTGTTCATTATTGCTGCAGAGTTTGTGTTTCCGTCTG TTTTAT GG CCCAGNGACA  TTTGGTATATAA TCAAGAAGAATG AGT GGA                                                                                                                                           ]
[+] EMBL AU172417             [                            CGCCGACGATGCCACAGCAGCACCCACAGCCGCCGGCCGGCTCGCGCCTCCTCGACGCCGTCCCGCTCTTCGTCGTCGTCCTCCTCGCCGCCCACGTCCTAGCCCTCGTGTACTGGATGTACAGGTTAGCCTCGGACAAGCAGCCGCCGCGGAGGAAGACGCAGTAGCCACCACCACCACGGGCCCCGACGGCTTCGTGCTCGCCTTTGTGTAGCCGATCAAATCGTGAGCTGCGTGAGCAAGATTTTACCTCTAGAAAGCTTAGGTTGTTCATTATTGTTGCAGAGTTTGTGTTTCCGTTTG TTTTAT GGTACCAGTGACA  TTTGGTATATAA TCAAGAAGAATT AGT GGAGGACTT GTTGTATGAATTGCCTTGGGTTCTTTTTAATATGAGAATTCCATAATTGTTCTGTGACAAAAAAaaa                                                                 ]
[+] EMBL AU183958             [                                                                                                                                                                                                                                                                                                                                                      ACCAGTGACA  TTTGGTATATAA TCAAGAAGAATT AGT GGAGGACTT GTTGTATGAATTGCCTTGGGTTCTTTTTAATATGAGAATTCCATAATTGTTCTGTGACAAAAAA                                                                    ]




>consensus_9620#0
CCNCNATCTTCCACTCCCCCACCCACGCCGCCGACGATGCCACAGCAGCACCCACAGCCG
CCGGCCGGCTCGCGCCTCCTCGACGCCGTCCCGCTCTTCGTCGTCGTCCTCCTCGCCGCC
CACGTCCTAGCCCTCGTGTACTGGATGTACAGGTTAGCCTCGGACAAGCAGCCGCCGCGG
AGGAAGACGCAGTAGCCACCACCACCACGGGCCCCGACGGCTTCGTGCTCGCCTTTGTGT
AGCCGATCAAATCGTGAGCTGCGTGAGCAAGATTTTACCTCTAGAAAGCTTAGGTTGTTC
ATTATTGTTGCAGAGTTTGTGTTTCCGTTTGTTTTATGGTACCAGTGACATTTGGTATAT
AATCAAGAAGAATTAGTGGAGGACTTGTTGTATGAATTGCCTTGGGTTCTTTTTAATATG
AGAATTCCATAATTGTTCTGTGACAAAAAATCGTCAGTGGCTTTACTTGTTTCTCACAAA
TCAATTACCAGACTCTTGATCGATTAAACCGTTCAGTT

clustalw multiple alignements is not computed in this case