cluster # 9622

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Oryza sativa
cluster # 9622 cluster # 9622 Sequences # 6 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9622#0 length = 981 sequences # 6
consensusID : consensus_9622#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 981
fasta sequence
                              [TCGCAGCAGGAGGCCGCCGCCGTCCCGACGCCCAAGAGCCGGAGCAAGAACGGTGGCGGCCGGAGCGGCGGCGGCGGCGGGGAGGACCCGCGGAGGTCGGATTATTACCTCAACCTTGGGACGGCGGTGCGCACGCTGCGGGACGACCTGCCGGCGGTGTTCGTCCGGGAACCCAACTACGACATCTACCGTGAAGATATAACATTCGTCGATCCGTTGAACACTTTCCATGGAATCGACAACTACAAGACAATCTTCTGGGCTCT-CAGATTCCA-TGGGCGCCTACTCTTCC-GT-GAAA--TCGGG-CTTGACAT-ATCACGCATTTGGCA-ACT-GACAGAGAACTCGATAGTTGTCCGGTGGG-AGCTGTGGGGAACCCCG-CGTGTCCCGTGGGAATCATACGGTTGCTTCAGTGGCACCTCGAGATACAAGGTCGACAGGAACGGGAAGATTTACGAGCACA-AAGTCGATAATTTGGCACTGGACTTTCCCCGCCCAGCAGCCAAAGTGGGCAGCATTGCTGACATTGTCGTCGCCTCATGCCC-ACCAAGCCCCA-ATTTGACGTTCTGGGACATGGTTGGGAGTACTGGTGATGGGTGCTCATGGGC-AAATCTCTACCAGGCGGTGGTGGAAACCGTGGAGC-GGGAAGGCAATGATCCTGCTGGCATTGCCATTGAAGGTCTGCTTACTTGTTCATAGGATGGAATGAGCTTCAGGGCTAGCTGCTTGGTA-GTGAGCTTTCTTAGGGAAGATGTATAGAAGGTGGATACATAAATCATAATGCTATTAATCTTGGTACACTGTAGCTCTAGAATAACA-ATTTTAGATACAATACATGGTAGATAACTATGTCTC-AGAATCTTTGCTACGCATTCTAGAATGTATCTACCAGTCTCTTAAGTCTCAAAAGTTAATGGCTATTCTTAGCAGGTCTTTCAATATCCTAAATTATGAAAATGAAGGTTGCCAAAAAAAAAAAAAAAAAAA]

[+] EMBL AK065653             [TCGCAGCAGGAGGCCGCCGCCGTCCCGACGCCCAAGAGCCGGAGCAAGAACGGTGGCGGCCGGAGCGGCGGCGGCGGCGGGGAGGACCCGCGGAGGTCGGATTATTACCTCAACCTTGGGACGGCGGTGCGCACGCTGCGGGACGACCTGCCGGCGGTGTTCGTCCGGGAACCCAACTACGACATCTACCGTGAAGATATAACATTCGTCGATCCGTTGAACACTTTCCATGGAATCGACAACTACAAGACAATCTTCTGGGCTCT CAGATTCCA TGGGCGCCTACTCTTCC GT GAAA  TCGGG CTTGACAT ATCACGCATTTGGCA ACT GACAGAGAACTCGATAGTTGTCCGGTGGG AGCTGTGGGGAACCCCG CGTGTCCCGTGGGAATCATACGGTTGCTTCAGTGGCACCTCGAGATACAAGGTCGACAGGAACGGGAAGATTTACGAGCACA AAGTCGATAATTTGGCACTGGACTTTCCCCGGCCAGCAGCCAAAGTAGGCAGCATTGCTGACATTGTCGTCGCCTCATGCCC ACCAAGCCCCA ATTTGACGTTCTGGGACATGGTTGGGAGTACTGGTGATGGGTGCTCATGGGC AAATCTCTACCAGGCGGTGGTGGAAACCGTGGAGC GGGAAGGCAATGATCCTGCTGGCATTGCCATTGAAGGTCTGCTTACTTGTTCATAGGATGGAATGAGCTTCAGGGCTAGCTGCTTGGTA GTGAGCTTTCTTAGGGAAGATGTATAGAAGGTGGATACATAAATCATAATGCTATTAATCTTGGTACACTGTAGCTCTAGAATAACA ATTTTAGATACAATACATGGTAGATAACTATGTCTC AGAATCTTTGCTACGCATTCTAGAATGTATCTACCAGTCTCTTAAGTCTCAAAAGTTAATGGCTATTCTTAGCAGGTCTT                                                    ]
[+] EMBL BM419117             [                                                                                                                                                                                                                                                                  TGGGCTCTACAGATTCCACTGGGCG CTACTCTTCCGGTAGAAAGTTCGGGCCTGGACATNGTCACGCATTTGGCAGCCTGGACAGAGTACTCGATAGTTGTCCGGTGGGTACCTTTGGGGAACCCCGTCGTGTCCCGTGGGAATCATATGGTTGCTTCAGTGGCACCTCGAGATACAAGGTCGACAGGAACGGGAAGATTTACGAGCACA AAGTCGATAATTTGGCACTGGACTTTCCCCGCCCAGCAGCCTAAGTGGGCAGCATTGCTGACATTGTCGTCGCCACATGCCC ACCAAGCCCCA ATTTGACGTTCTGGGACATGGTTGGGAGTACTGGTGATGGGTGCTCATGGGC AAATCTCTACCA GCGGTGGTGGAAACCGTGGAGC AGGAAGGCAATGATCCTGCTGGCATTGCCATTGAAGGTCTGCTTACTTGTTCATAGGATGGAATGAGCTTCCGGGCTAGCTGCTTGGTATGTGGGCTTTCTTAGGGAAGATGTATAGAAGGTGGATACATAAATCATAATGCTATTAATCTTCGTATACTGTAGCTCTAGAATAACA ATTTTAGATACAATACATGGTAGATAACTATGTCTC AAAATCTTCGCCACGCAaaaaaaaaa                                                                                                          ]
[-] EMBL CA762036             [                                                                                                                                                                                                                                                                                                                TCGGG CCTGACAT ATCCCGCATTTGGCA ACT GACAGAGAACTCGATAGTTGTCCGGTGGG AGCTGTGGGGAACCCCG CGTGTCCCGTGGGAATCATATGGTTGCTTCAGTGGCACCTCGAGATACAAGGTCGACAGGAACGGGAAGATTTACGAGCACA AAGTCGATAATTTGGCACTGGACTTTCCCCGCCCAGCAGCCAAAGTGGGCAGCATTGCTGACATTGTTGTCGCCACATGCCC ACCAAGCCCCA ATTTGACGTTTTGGGACATGGTTGGGAGTACTGGTGATGGGTGCTCATGGGC AAATCTCTACCAGGCGGTGGTGGAAACCGTGGAGC AGGAAGGCAATGATCCTGCTGGCATTGCCATTGAAGGTCTGCTTACTTGTTCATAGGATGGAATGAGCTTCAGGGCTAGCTGCTTGGTA GTGGGCTTTTTTAGGGAAGATGTATAGAAGGTGGATACATAAATCATAATGCTATTAATCTTCGTATACTGTAGCTCTAGAATAACA ATTTTAGATACAATACATGGTAGATAACTATGTCTC AAAATTTTCGCCACGCATTTTGGAATGTTACTACCAGTCTCTTATGTCTCAAAAGTTAATGGCTATTCTTAGTAGGTCTTTCAATATCCTAAATTATGAAAATGAAGGTTGCCAAAAAAAAAAAAAAAAAAA]
[-] EMBL CF304714             [                                                                                                                                                                                                                                                                                                                  GGG CTTGACAT ATCACGCATTTGGCA ACT GACAGAGAACTCGATAGTTGTCCGGTGGG AGCTGTGGGGAACNCCG CGTGTCCCGTGGGAATCATACGGTTGCTTCAGTGGCACCTCGAGATACAAGGTCGACAGGAACGGGAAGATTTACGAGCACA AAGTCGATAATTTGGCACTGGACTTTCCCCGGCCAGCAGCCAAAGTAGGCAGCATTGCTGACATTGTCGTCGCCTCATGCCC ACCAAGCCCCA ATTTGACGTTCTGGGACATGGTTGGGAGTACTGGTGATGGGTGCTCATGGGC AAATCTCTACCAGGCGGTGGTGGAAACCGTGGAGC GGGAAGGCAATGATCCTGCTGGCATTGCCATTGAAGGTCTGCTTACTTGTTCATAGGATGGAATGAGCTTCAGGGCTAGCTGCTTGGTA GTGAGCTTTCTTAGGGAAGATGTATAGAAGGTGGATACATAAATCATAATGCTATTAATCTTGGTACACTGTAGCTCTAGAATAACA ATTTTAGATACAATACATGGTAGATAACTATGTCTC AGAATCTTTGCTACGCAaaaaaaaa                                                                                                           ]
[+] EMBL BI813363             [                                                                                                                                                                                                                                                                                                                                                                                                                  TCATA TGTTGCTTCAGT GCACCTCGAGATACAAGGTCGACAGGAACGGGAAGATTTACGAGCACACAAGTCGATAATTTGGCACTGGACTTTCCCCGCCCAGCAGCCCAAGTGGGCAGCATTGCTGACATTGTCGTCGCCACATGCCCAACCAAGCCCCACATTTGACGTTCTGGGACATGGTTGGGAGTACTGGTGATGGGTGCTCATGGGCAAAATCTCTACCAGGCGGTGGTGGAAACCGTGGAGCACGGAAGGCCATGATCCTGCTGGCATTGCCCTTGAAGGTCTGCTTACTTGTTCATAGGATGGAATGAGCTTCAGGGCTAGCTGCTTGGTA GTGGGCTTTCTTAGGGAAGATGTATAGAAGGTGGATACATAAATCATAATGCTATTAATCTTCGTATACTGTAGCTCTAGAATAACACATTTTAGATACAATACATGGTAGATAACTATGTCTCAAAAATCTTCGCCACGCATTTTGGAATGTTACTACCAGTCTCTTATGTCTCCAAAaaaaaa                                                                        ]
[+] EMBL AU172619             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         nGTCGCCTCATGCCC NCCAAGCCCCA ATTTGACGTTCTGGGACATGGTTGGGAGTACTGGTGATGGGTGCTCATGGGC AAATCTCTACCAGGCGGTGGTGGAAACCGTGGAGC GGGAAGGCAATGATCCTGCTGGCATTGCCATTGAAGGTCTGCTTACTTGTTCATAGGATGGAATGAGCTTCAGGGCTAGCTGCTTGGTA GTGAGCTTTCTTAGGGAAGATGTATAGAAGGTGGATACATAAATCATAATGCTATTAATCTTGGNACACTGTAGCTCTAGAATAACA ATTTTAGATACAATACATGGTAGATAACTATGTCTC AGAATCTTTGCTACGCATTCTAGAATGTATCTACCAGTCTCTTAAGTCTCAAAAGTTAATGGCTATTCTTAGCAGGTCTTTCAATATCCTAAATTATGAAAATGAAGGTTGCCAAAAAAAAAAAAAAA    ]




>consensus_9622#0
TCGCAGCAGGAGGCCGCCGCCGTCCCGACGCCCAAGAGCCGGAGCAAGAACGGTGGCGGC
CGGAGCGGCGGCGGCGGCGGGGAGGACCCGCGGAGGTCGGATTATTACCTCAACCTTGGG
ACGGCGGTGCGCACGCTGCGGGACGACCTGCCGGCGGTGTTCGTCCGGGAACCCAACTAC
GACATCTACCGTGAAGATATAACATTCGTCGATCCGTTGAACACTTTCCATGGAATCGAC
AACTACAAGACAATCTTCTGGGCTCTCAGATTCCATGGGCGCCTACTCTTCCGTGAAATC
GGGCTTGACATATCACGCATTTGGCAACTGACAGAGAACTCGATAGTTGTCCGGTGGGAG
CTGTGGGGAACCCCGCGTGTCCCGTGGGAATCATACGGTTGCTTCAGTGGCACCTCGAGA
TACAAGGTCGACAGGAACGGGAAGATTTACGAGCACAAAGTCGATAATTTGGCACTGGAC
TTTCCCCGCCCAGCAGCCAAAGTGGGCAGCATTGCTGACATTGTCGTCGCCTCATGCCCA
CCAAGCCCCAATTTGACGTTCTGGGACATGGTTGGGAGTACTGGTGATGGGTGCTCATGG
GCAAATCTCTACCAGGCGGTGGTGGAAACCGTGGAGCGGGAAGGCAATGATCCTGCTGGC
ATTGCCATTGAAGGTCTGCTTACTTGTTCATAGGATGGAATGAGCTTCAGGGCTAGCTGC
TTGGTAGTGAGCTTTCTTAGGGAAGATGTATAGAAGGTGGATACATAAATCATAATGCTA
TTAATCTTGGTACACTGTAGCTCTAGAATAACAATTTTAGATACAATACATGGTAGATAA
CTATGTCTCAGAATCTTTGCTACGCATTCTAGAATGTATCTACCAGTCTCTTAAGTCTCA
AAAGTTAATGGCTATTCTTAGCAGGTCTTTCAATATCCTAAATTATGAAAATGAAGGTTG
CCAAAAAAAAAAAAAAAAAAA
clustalw multiple alignements is not computed in this case