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Oryza sativa
cluster # 9633 cluster # 9633       Sequences # 6       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9633#0 length = 2205 sequences # 4  
consensus_9633#1 length = 769 sequences # 1  
consensus_9633#2 length = 307 sequences # 1  

consensusID : consensus_9633#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 2205
fasta sequence
                              [ACAGTAGCAGTAGCCACCACGCACGCACGCGTCGGTGCGTGTTCCCCCCCCCCCCCCCTCCCCCCCGCGACAAATTCCTCCTCGCCTTTCCCCTCCTCCTCCCTCTCCTCGCCGCCGATCCGCCGCCGCCGCCGCAGCCGGGATCTTCCGTCGGATAGTATGGTATTGTGCTGGACACACTGTTGACTTTCGTCTCTATGATTATCTCTGATACCGATCGGAGCATTGCACCTCTTCCTTCGATCAATGGGCATTGTGAAGGTAGCAAGTTGTGCGCCTACAGAAGAGCGGGCTTACAGCTGTGGAGACGAGGACATTACACAAGAGGAGAAAATGCTGCTTCAGAGATTTCCTATTCATGAATCCGATGACTATGAACATGAAGAGGTCAATTGTGAGCTTGCAAAGTCTGGAGATCAGATCTGTAGTGTCCCTTATGGGCTTTATGATTTGCCTGAATTGAATGATATTCTTTCTTTGGAGACATGGAACTTATGTCTAACAGAAGATGATAGATTCCGTCTAGCAGCCTATCTCCCAGACATGGACCAACATGATTTCTTTGTAACAATGAAGGAGCTGTTTAGTGGCAGTGACCTGTTCTTTGGGAGTCCAGTGAAGAGCTTCTTCCACAGATTGAATGGTGGGTTTTATTCTCCAGAAGTTTCCCAGGCTAGAGAATTACTGATGATCTTTGAAAGACGAAGATATTATCATTTTCTGAAGTCCCATCATGATGGCATGATTTTCAAGTTTGCATCCATGGACAAGGTAGGAGGACGATGTGGGGCGAGTACTGGTCTTCAGGGTAAGGTTAACAGTTGGAATGACAGAAGACATGAAGATCCCCTCACAGGTGTTGACATAAGCGGTTCTCCTTTCAATAGAAGTCTATCAATTGCCAATGAGGTTAAAGATGCAACCCTTCCACCTTTGAAGCGAACCAAACGT----ATGGGACAGTAACCACTCATTGTTCAGCCAAGCGCAAGGGAATAGTCTACAGAGACAAATCAATGGAAATGAGCTCATTGAAGAGTCCTGTCTTTCATGTTCCTGGTGAGCTTACTACATGTATTAGATTGCCCAAAGGTGTGCTGAAAATAAAGACCGATTGTGCTTCCCTCATTGATCACAATGAAGGAATTCATCGTACACCAGAACCGATGCTAGCAGACCAACTGGGAATACAGGTCTCCAGCTTACCTTGCGCTTCTGCACTGGATGTTCATGGTTTTGCGATGAATTCAGCTTATTACTACCACATAAACACAAGCAAGAGTACTTTGAGAAATCTACATGTGCGTCCCTACCAAAGAGAAGGCACACTTGATACTTACCCTCACTCAGTTGAAAGTCCGTTTGGAGTGCAAATTATGGTTCCAGAGGAGCTTAAAAGGGGTTACTATTCTCGAATGCCGAATTCCTTCCATCAGTCAACAACCAAACATAGTCCGGAATATTGCAATGAAGCACCCCACGAGAAGAACCTTTTGAAGAACTTTGGTCAACAAAATGCCGTAATTCCTGAAAGTTCTCCTGATCCATTTACAAGGAATACTGATTGTCATCAAACAA--ATGGATACATGACGCATGGTCTGAAAACTGC-TGAAAGTATTTCTGAGGTGTTGACCCTTGGTACAGACACCGCTGGCCCTTACAAACACCTATTGGAGCAGTCTGAAACAATGCGTTACCC-AGA-AGGATTGAAGCTGAAGACTCCTGCCAGCCAGTCAGTTACAGAAGTTGAAGAAGGTCATAGGTACCCTTTCACATACA-AAAGGAGGAAGCTGCAGAAGAGGCTTGACCTTGTTGATCCTGTCAAGAAATCAACTATGGTGGATTCAGAGCCTCTGAGCGCACTGGCTAGCGTGGCAAATGTAAAAATCAAAGGCAATCAAGCTTTGAAGATTGGCAGCT-GAGAACAAGGATAGCTGAACATAGAAATTGGAGCATGGCTTATGAACATCTAGCTAACATAGTAAATAAAATGTTCTCTTTTGTTTTGGGTTCTGGTTCGAAGTCAGGTGGAGTGCATTCATTGTTAAATTTGATAGTAGACAAAATGACATG--AATCTCTAGTGCAAAGCATTCAGATTCTCTGCTTTCTATCATGCACATCCCTCCCTGAATACCTCGTCTTCCAGATGAGCCGCAGTTTACTTAGATATATACATTGTGTTAATGTTTTTCTTTTAAAATAGTGCT]

[+] EMBL AK068508             [ACAGTAGCAGTAGCCACCACGCACGCACGCGTCGGTGCGTGTTCCCCCCCCCCCCCCCTCCCCCCCGCGACAAATTCCTCCTCGCCTTTCCCCTCCTCCTCCCTCTCCTCGCCGCCGATCCGCCGCCGCCGCCGCAGCCGGGATCTTCCGTCGGATAGTATGGTATTGTGCTGGACACACTGTTGACTTTCGTCTCTATGATTATCTCTGATACCGATCGGAGCATTGCACCTCTTCCTTCGATCAATGGGCATTGTGAAGGTAGCAAGTTGTGCGCCTACAGAAGAGCGGGCTTACAGCTGTGGAGACGAGGACATTACACAAGAGGAGAAAATGCTGCTTCAGAGATTTCCTATTCATGAATCCGATGACTATGAACATGAAGAGGTCAATTGTGAGCTTGCAAAGTCTGGAGATCAGATCTGTAGTGTCCCTTATGGGCTTTATGATTTGCCTGAATTGAATGATATTCTTTCTTTGGAGACATGGAACTTATGTCTAACAGAAGATGATAGATTCCGTCTAGCAGCCTATCTCCCAGACATGGACCAACATGATTTCTTTGTAACAATGAAGGAGCTGTTTAGTGGCAGTGACCTGTTCTTTGGGAGTCCAGTGAAGAGCTTCTTCCACAGATTGAATGGTGGGTTTTATTCTCCAGAAGTTTCCCAGGCTAGAGAATTACTGATGATCTTTGAAAGACGAAGATATTATCATTTTCTGAAGTCCCATCATGATGGCATGATTTTCAAGTTTGCATCCATGGACAAGGTAGGAGGACGATGTGGGGCGAGTACTGGTCTTCAGGGTAAGGTTAACAGTTGGAATGACAGAAGACATGAAGATCCCCTCACAGGTGTTGACATAAGCGGTTCTCCTTTCAATAGAAGTCTATCAATTGCCAATGAGGTTAAAGATGCAACCCTTCCACCTTTGAAGCGAACCAAACGT    ATGGGACAGTAACCACTCATTGTTCAGCCAAGCGCAAGGGAATAGTCTACAGAGACAAATCAATGGAAATGAGCTCATTGAAGAGTCCTGTCTTTCATGTTCCTGGTGAGCTTACTACATGTATTAGATTGCCCAAAGGTGTGCTGAAAATAAAGACCGATTGTGCTTCCCTCATTGATCACAATGAAGGAATTCATCGTACACCAGAACCGATGCTAGCAGACCAACTGGGAATACAGGTCTCCAGCTTACCTTGCGCTTCTGCACTGGATGTTCATGGTTTTGCGATGAATTCAGCTTATTACTACCACATAAACACAAGCAAGAGTACTTTGAGAAATCTACATGTGCGTCCCTACCAAAGAGAAGGCACACTTGATACTTACCCTCACTCAGTTGAAAGTCCGTTTGGAGTGCAAATTATGGTTCCAGAGGAGCTTAAAAGGGGTTACTATTCTCGAATGCCGAATTCCTTCCATCAGTCAACAACCAAACATAGTCCGGAATATTGCAATGAAGCACCCCACGAGAAGAACCTTTTGAAGAACTTTGGTCAACAAAATGCCGTAATTCCTGAAAGTTCTCCTGATCCATTTACAAGGAATACTGATTGTCATCAAACAA  ATGGATACATGACGCATGGTCTGAAAACTGC TGAAAGTATTTCTGAGGTGTTGACCCTTGGTACAGACACCGCTGGCCCTTACAAACACCTATTGGAGCAGTCTGAAACAATGCGTTACCC AGA AGGATTGAAGCTGAAGACTCCTGCCAGCCAGTCAGTTACAGAAGTTGAAGAAGGTCATAGGTACCCTTTCACATACA AAAGGAGGAAGCTGCAGAAGAGGCTTGACCTTGTTGATCCTGTCAAGAAATCAACTATGGTGGATTCAGAGCCTCTGAGCGCACTGGCTAGCGTGGCAAATGTAAAAATCAAAGGCAATCAAGCTTTGAAGATTGGCAGCT GAGAACAAGGATAGCTGAACATAGAAATTGGAGCATGGCTTATGAACATCTAGCTAACATAGTAAATAAAATGTTCTCTTTTGTTTTGGGTTCTGGTTCGAAGTCAGGTGGAGTGCATTCATTGTTAAATTTGATAGTAGACAAAATGACATG  AATCTCTAGTGCAAAGCATTCAGATTCTCTGCTTTCTATCATGCACATCCCTCCCTGAATACCTCGTCTTCCAGATGAGCCGCAGTTTACTTAGATATATACATTGTGTTAATGTTTTTCTTTTAAAATAGTGCT]
[+] EMBL OSR3305A             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ACCCTTCCACCTTTGAAGCGAACCAAACGTATGGATGGGACAGTAACCACTCATTGTTCAGCCAAGCGCAAGGGAATAGTCTACAGAGACAAATCAATGGAAATGAGCTCATTGAAGAGTCCTGTCTTTCATGTTCCTGGTGAGCTTACTACATGTATTAGATTGCCCAAAGGTGTGCTGAAAATAAAGACCGATTGTGCTTCCCTCATTGATCACAATGAAGGAATTCATCGTACACCAGAACCGATGCTAGCAGACCAACTGGGAATACAGGTCTCCAGCTTACCTTGCGCTTCTGCACTGGATGTTCATGGTTTTGCGATGAATTCAGCTTATTACTACCACATAAACACAAGCAAGAGTACTTTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL BQ906481             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    cccggCTGATTGTCATCAAACAAATATGGATACATGACGCATGGTCTGAAAACTGCGTGAAAGTATTTCTGAGGTGTTGACCCTTGGTACAGACACCGCTGGCCCTTACNAACACCTATTGGAGCAGTCTGAAACAATGCGTTACCCTAGATAGGATTGAAGCTGAAGACTCCTGCCAGCCAGTCAGTTACAGAAGTTGAAGAAGGTCATAGGTACCCTTTCACATACATAAAGGAGGAAGCTGCAGAAGAGGCTTGACCTTGTTGATCCTGTCAAGAAATCAACTATGGTGGATTCAGAGCCTCTGAGCGCACTGGCTAGCGTGGCAAATGTAAAAATCAAAGGCAATCAAGCTTTGAAGATTGGCAGCTCGAG ACCCGGATAGCTGAACATAGAAATTGGAGCATGGCTTATGAACATCTAGCTAACATAGTAAATAAAATGTTCTCTTTTGTTTTGGGTTCTGGTTCGAAGTCAGGTGGAGTGCATTCATTGTTAAATTTGATAGTAGACAAAATGACCCGCNNNTCTCTAGTGCAAAaaaaaaa                                                                                                                 ]
[+] EMBL AU173482             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 CACATACA AAAGGAGGAAGCTGCAGAAGAGGCTTGACCTTGTTGATCCTGTCAAGAAATCAACTATGGTGGATTCAGAGCCTCTGAGCGCACTGGCTAGCGTGGCAAATGTAAAAATCAAAGGCAATCAAGCTTTGAAGATTGGCAGCT GAGAACAAGGATAGCTGAACATAGAAATTGGAGCATGGCTTATGAACATCTAGCTAACATAGTAAATAAAATGTTCTCTTTTGTTTTGGGTTCTGGTTCGAAGTCAGGTGGAGTGCATTCATTGTTAAATTTGATAGTAGACAAAATGACATG  AATCTCTAGTGCAAAGCATTCAGATTCTCTGCTTTCTATCATGCACATCCCTCCCTGAATACCTCGTCTTCCAGATGAGCCGCAGTTTACTTAGATATATACATTGTGTTAATGTTTTTCTTTTAAAAa      ]


>consensus_9633#0 ACAGTAGCAGTAGCCACCACGCACGCACGCGTCGGTGCGTGTTCCCCCCCCCCCCCCCTC CCCCCCGCGACAAATTCCTCCTCGCCTTTCCCCTCCTCCTCCCTCTCCTCGCCGCCGATC CGCCGCCGCCGCCGCAGCCGGGATCTTCCGTCGGATAGTATGGTATTGTGCTGGACACAC TGTTGACTTTCGTCTCTATGATTATCTCTGATACCGATCGGAGCATTGCACCTCTTCCTT CGATCAATGGGCATTGTGAAGGTAGCAAGTTGTGCGCCTACAGAAGAGCGGGCTTACAGC TGTGGAGACGAGGACATTACACAAGAGGAGAAAATGCTGCTTCAGAGATTTCCTATTCAT GAATCCGATGACTATGAACATGAAGAGGTCAATTGTGAGCTTGCAAAGTCTGGAGATCAG ATCTGTAGTGTCCCTTATGGGCTTTATGATTTGCCTGAATTGAATGATATTCTTTCTTTG GAGACATGGAACTTATGTCTAACAGAAGATGATAGATTCCGTCTAGCAGCCTATCTCCCA GACATGGACCAACATGATTTCTTTGTAACAATGAAGGAGCTGTTTAGTGGCAGTGACCTG TTCTTTGGGAGTCCAGTGAAGAGCTTCTTCCACAGATTGAATGGTGGGTTTTATTCTCCA GAAGTTTCCCAGGCTAGAGAATTACTGATGATCTTTGAAAGACGAAGATATTATCATTTT CTGAAGTCCCATCATGATGGCATGATTTTCAAGTTTGCATCCATGGACAAGGTAGGAGGA CGATGTGGGGCGAGTACTGGTCTTCAGGGTAAGGTTAACAGTTGGAATGACAGAAGACAT GAAGATCCCCTCACAGGTGTTGACATAAGCGGTTCTCCTTTCAATAGAAGTCTATCAATT GCCAATGAGGTTAAAGATGCAACCCTTCCACCTTTGAAGCGAACCAAACGTATGGGACAG TAACCACTCATTGTTCAGCCAAGCGCAAGGGAATAGTCTACAGAGACAAATCAATGGAAA TGAGCTCATTGAAGAGTCCTGTCTTTCATGTTCCTGGTGAGCTTACTACATGTATTAGAT TGCCCAAAGGTGTGCTGAAAATAAAGACCGATTGTGCTTCCCTCATTGATCACAATGAAG GAATTCATCGTACACCAGAACCGATGCTAGCAGACCAACTGGGAATACAGGTCTCCAGCT TACCTTGCGCTTCTGCACTGGATGTTCATGGTTTTGCGATGAATTCAGCTTATTACTACC ACATAAACACAAGCAAGAGTACTTTGAGAAATCTACATGTGCGTCCCTACCAAAGAGAAG GCACACTTGATACTTACCCTCACTCAGTTGAAAGTCCGTTTGGAGTGCAAATTATGGTTC CAGAGGAGCTTAAAAGGGGTTACTATTCTCGAATGCCGAATTCCTTCCATCAGTCAACAA CCAAACATAGTCCGGAATATTGCAATGAAGCACCCCACGAGAAGAACCTTTTGAAGAACT TTGGTCAACAAAATGCCGTAATTCCTGAAAGTTCTCCTGATCCATTTACAAGGAATACTG ATTGTCATCAAACAAATGGATACATGACGCATGGTCTGAAAACTGCTGAAAGTATTTCTG AGGTGTTGACCCTTGGTACAGACACCGCTGGCCCTTACAAACACCTATTGGAGCAGTCTG AAACAATGCGTTACCCAGAAGGATTGAAGCTGAAGACTCCTGCCAGCCAGTCAGTTACAG AAGTTGAAGAAGGTCATAGGTACCCTTTCACATACAAAAGGAGGAAGCTGCAGAAGAGGC TTGACCTTGTTGATCCTGTCAAGAAATCAACTATGGTGGATTCAGAGCCTCTGAGCGCAC TGGCTAGCGTGGCAAATGTAAAAATCAAAGGCAATCAAGCTTTGAAGATTGGCAGCTGAG AACAAGGATAGCTGAACATAGAAATTGGAGCATGGCTTATGAACATCTAGCTAACATAGT AAATAAAATGTTCTCTTTTGTTTTGGGTTCTGGTTCGAAGTCAGGTGGAGTGCATTCATT GTTAAATTTGATAGTAGACAAAATGACATGAATCTCTAGTGCAAAGCATTCAGATTCTCT GCTTTCTATCATGCACATCCCTCCCTGAATACCTCGTCTTCCAGATGAGCCGCAGTTTAC TTAGATATATACATTGTGTTAATGTTTTTCTTTTAAAATAGTGCT



consensusID : consensus_9633#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 769
fasta sequence
                              [GTCCGTTTGGAGTGCAAATTATGATTCCAGAGGAGCTTAAAAGGGGTTACTATTCTCGAATGCCGAATTCCTTCCATCAGTCAACAACCAAACATAGTCCGGAATATTGCAATGAAGCACCCCACGAGAAGAACCTTTTGAAGAACTTTGGTCAACAAAATGCCGTAATTCCTGAAAGTTCTCCTGATCCATTTACAAGGAATACTGATTGTCATCAAACAAATGGATACATGACGCATGGTCTGAAAACTGCTGAAAGTATTTCTGAGGTGTTGACCCTTGGTACAGACACCGCTGGCCCTTACAAACACCTATTGGAGCAGTCTGAAACAATGCGTTACCCAGAAGGATTGAAGCTGAAGACTCCTGCCAGCCAGTCAGTTACAGAAGTTGAAGAAGGTCATAGGTACCCTTTCACATACAAAAGGAGGAAGCTGCAGAAGAGGCTTGACCTTGTTGATCCTGTCAAGAAATCAACTATGGTGGATTCAGAGCCTCTGAGCGCACTGGCTAGCGTGGCAAATGTAAAAATCAAAGGCAATCAAGCTTTGAAGATTGGCAGCTGAGAACAAGGATAGCTGAACATAGAAATTGGAGCATGGCTTATGAACATCTAGCTAACATAGTAAATAAAATGTTCTCTTTTGTTTTGGGTTCTGGTTCGAAGTCAGGTGGAGTGCATTCATTGTTAAATTTGATAGTAGACAAAATGACATGAATCTTTAGTGCAAAGCATTCAGATTCTCTGCTTTCTTTCAAAAAAAAAAAG]

[-] EMBL CB642675             [GTCCGTTTGGAGTGCAAATTATGATTCCAGAGGAGCTTAAAAGGGGTTACTATTCTCGAATGCCGAATTCCTTCCATCAGTCAACAACCAAACATAGTCCGGAATATTGCAATGAAGCACCCCACGAGAAGAACCTTTTGAAGAACTTTGGTCAACAAAATGCCGTAATTCCTGAAAGTTCTCCTGATCCATTTACAAGGAATACTGATTGTCATCAAACAAATGGATACATGACGCATGGTCTGAAAACTGCTGAAAGTATTTCTGAGGTGTTGACCCTTGGTACAGACACCGCTGGCCCTTACAAACACCTATTGGAGCAGTCTGAAACAATGCGTTACCCAGAAGGATTGAAGCTGAAGACTCCTGCCAGCCAGTCAGTTACAGAAGTTGAAGAAGGTCATAGGTACCCTTTCACATACAAAAGGAGGAAGCTGCAGAAGAGGCTTGACCTTGTTGATCCTGTCAAGAAATCAACTATGGTGGATTCAGAGCCTCTGAGCGCACTGGCTAGCGTGGCAAATGTAAAAATCAAAGGCAATCAAGCTTTGAAGATTGGCAGCTGAGAACAAGGATAGCTGAACATAGAAATTGGAGCATGGCTTATGAACATCTAGCTAACATAGTAAATAAAATGTTCTCTTTTGTTTTGGGTTCTGGTTCGAAGTCAGGTGGAGTGCATTCATTGTTAAATTTGATAGTAGACAAAATGACATGAATCTTTAGTGCAAAGCATTCAGATTCTCTGCTTTCTTTCAAAAAAAAAAAG]


>consensus_9633#1 GTCCGTTTGGAGTGCAAATTATGATTCCAGAGGAGCTTAAAAGGGGTTACTATTCTCGAA TGCCGAATTCCTTCCATCAGTCAACAACCAAACATAGTCCGGAATATTGCAATGAAGCAC CCCACGAGAAGAACCTTTTGAAGAACTTTGGTCAACAAAATGCCGTAATTCCTGAAAGTT CTCCTGATCCATTTACAAGGAATACTGATTGTCATCAAACAAATGGATACATGACGCATG GTCTGAAAACTGCTGAAAGTATTTCTGAGGTGTTGACCCTTGGTACAGACACCGCTGGCC CTTACAAACACCTATTGGAGCAGTCTGAAACAATGCGTTACCCAGAAGGATTGAAGCTGA AGACTCCTGCCAGCCAGTCAGTTACAGAAGTTGAAGAAGGTCATAGGTACCCTTTCACAT ACAAAAGGAGGAAGCTGCAGAAGAGGCTTGACCTTGTTGATCCTGTCAAGAAATCAACTA TGGTGGATTCAGAGCCTCTGAGCGCACTGGCTAGCGTGGCAAATGTAAAAATCAAAGGCA ATCAAGCTTTGAAGATTGGCAGCTGAGAACAAGGATAGCTGAACATAGAAATTGGAGCAT GGCTTATGAACATCTAGCTAACATAGTAAATAAAATGTTCTCTTTTGTTTTGGGTTCTGG TTCGAAGTCAGGTGGAGTGCATTCATTGTTAAATTTGATAGTAGACAAAATGACATGAAT CTTTAGTGCAAAGCATTCAGATTCTCTGCTTTCTTTCAAAAAAAAAAAG



consensusID : consensus_9633#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 307
fasta sequence
                              [CGCTGCCACTGCCACTGCCACTGCCAAGCAAACAGCGCGGCGCCACAGTAGCAGTAGCCACCACGCACGCACGCGTCGGTGCGTGTTCCCCCCCCCCCCCCCACCCCCCCGCTACAAATTCATGCTCATCTTTCCCCTCCTCCTCCCTCTCCTCACCGACGATCGGCCGCCGCCGCCGCACCCGGGATCTTCCGTGGGATAGAATGGTATTGTGCTGGACACACTGATGACTTTCGTATGTATGAATATCTCTGATACCGATCGGAGGATTGGACCTCTTCCGTCGATCCATGGGCATTGTGAACGC]

[+] EMBL CB642674             [CGCTGCCACTGCCACTGCCACTGCCAAGCAAACAGCGCGGCGCCACAGTAGCAGTAGCCACCACGCACGCACGCGTCGGTGCGTGTTCCCCCCCCCCCCCCCACCCCCCCGCTACAAATTCATGCTCATCTTTCCCCTCCTCCTCCCTCTCCTCACCGACGATCGGCCGCCGCCGCCGCACCCGGGATCTTCCGTGGGATAGAATGGTATTGTGCTGGACACACTGATGACTTTCGTATGTATGAATATCTCTGATACCGATCGGAGGATTGGACCTCTTCCGTCGATCCATGGGCATTGTGAACGC]


>consensus_9633#2 CGCTGCCACTGCCACTGCCACTGCCAAGCAAACAGCGCGGCGCCACAGTAGCAGTAGCCA CCACGCACGCACGCGTCGGTGCGTGTTCCCCCCCCCCCCCCCACCCCCCCGCTACAAATT CATGCTCATCTTTCCCCTCCTCCTCCCTCTCCTCACCGACGATCGGCCGCCGCCGCCGCA CCCGGGATCTTCCGTGGGATAGAATGGTATTGTGCTGGACACACTGATGACTTTCGTATG TATGAATATCTCTGATACCGATCGGAGGATTGGACCTCTTCCGTCGATCCATGGGCATTG TGAACGC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9633#0      ACAGTAGCAGTAGCCACCACGCACGCACGCGTCGGTGCGTGTTCCCCCCCCCCCCCCCTC 60
consensus_9633#1      ------------------------------------------------------------
consensus_9633#2      ------------------------------------------------------------
                                                                                  

consensus_9633#0      CCCCCCGCGACAAATTCCTCCTCGCCTTTCCCCTCCTCCTCCCTCTCCTCGCCGCCGATC 120
consensus_9633#1      ------------------------------------------------------------
consensus_9633#2      ------------------------------------------------------------
                                                                                  

consensus_9633#0      CGCCGCCGCCGCCGCAGCCGGGATCTTCCGTCGGATAGTATGGTATTGTGCTGGACACAC 180
consensus_9633#1      ------------------------------------------------------------
consensus_9633#2      ------------------------------------------------------------
                                                                                  

consensus_9633#0      TGTTGACTTTCGTCTCTATGATTATCTCTGATACCGATCGGAGCATTGCACCTCTTCCTT 240
consensus_9633#1      ------------------------------------------------------------
consensus_9633#2      ------------------------------------------------------------
                                                                                  

consensus_9633#0      CGATCAATGGGCATTGTGAAGGTAGCAAGTTGTGCGCCTACAGAAGAGCGGGCTTACAGC 300
consensus_9633#1      ------------------------------------------------------------
consensus_9633#2      ------------------------------------------------------------
                                                                                  

consensus_9633#0      TGTGGAGACGAGGACATTACACAAGAGGAGAAAATGCTGCTTCAGAGATTTCCTATTCAT 360
consensus_9633#1      ------------------------------------------------------------
consensus_9633#2      ------------------------------------------------------------
                                                                                  

consensus_9633#0      GAATCCGATGACTATGAACATGAAGAGGTCAATTGTGAGCTTGCAAAGTCTGGAGATCAG 420
consensus_9633#1      ------------------------------------------------------------
consensus_9633#2      ------------------------------------------------------------
                                                                                  

consensus_9633#0      ATCTGTAGTGTCCCTTATGGGCTTTATGATTTGCCTGAATTGAATGATATTCTTTCTTTG 480
consensus_9633#1      ------------------------------------------------------------
consensus_9633#2      ------------------------------------------------------------
                                                                                  

consensus_9633#0      GAGACATGGAACTTATGTCTAACAGAAGATGATAGATTCCGTCTAGCAGCCTATCTCCCA 540
consensus_9633#1      ------------------------------------------------------------
consensus_9633#2      ------------------------------------------------------------
                                                                                  

consensus_9633#0      GACATGGACCAACATGATTTCTTTGTAACAATGAAGGAGCTGTTTAGTGGCAGTGACCTG 600
consensus_9633#1      ------------------------------------------------------------
consensus_9633#2      ------------------------------------------------------------
                                                                                  

consensus_9633#0      TTCTTTGGGAGTCCAGTGAAGAGCTTCTTCCACAGATTGAATGGTGGGTTTTATTCTCCA 660
consensus_9633#1      ------------------------------------------------------------
consensus_9633#2      ------------------------------------------------------------
                                                                                  

consensus_9633#0      GAAGTTTCCCAGGCTAGAGAATTACTGATGATCTTTGAAAGACGAAGATATTATCATTTT 720
consensus_9633#1      ------------------------------------------------------------
consensus_9633#2      ------------------------------------------------------------
                                                                                  

consensus_9633#0      CTGAAGTCCCATCATGATGGCATGATTTTCAAGTTTGCATCCATGGACAAGGTAGGAGGA 780
consensus_9633#1      ------------------------------------------------------------
consensus_9633#2      ------------------------------------------------------------
                                                                                  

consensus_9633#0      CGATGTGGGGCGAGTACTGGTCTTCAGGGTAAGGTTAACAGTTGGAATGACAGAAGACAT 840
consensus_9633#1      ------------------------------------------------------------
consensus_9633#2      ------------------------------------------------------------
                                                                                  

consensus_9633#0      GAAGATCCCCTCACAGGTGTTGACATAAGCGGTTCTCCTTTCAATAGAAGTCTATCAATT 900
consensus_9633#1      ------------------------------------------------------------
consensus_9633#2      ------------------------------------------------------------
                                                                                  

consensus_9633#0      GCCAATGAGGTTAAAGATGCAACCCTTCCACCTTTGAAGCGAACCAAACGTATGGGACAG 960
consensus_9633#1      ------------------------------------------------------------
consensus_9633#2      ------------------------------------------------------------
                                                                                  

consensus_9633#0      TAACCACTCATTGTTCAGCCAAGCGCAAGGGAATAGTCTACAGAGACAAATCAATGGAAA 1020
consensus_9633#1      ------------------------------------------------------------
consensus_9633#2      ------------------------------------------------------------
                                                                                  

consensus_9633#0      TGAGCTCATTGAAGAGTCCTGTCTTTCATGTTCCTGGTGAGCTTACTACATGTATTAGAT 1080
consensus_9633#1      ------------------------------------------------------------
consensus_9633#2      ------------------------------------------------------------
                                                                                  

consensus_9633#0      TGCCCAAAGGTGTGCTGAAAATAAAGACCGATTGTGCTTCCCTCATTGATCACAATGAAG 1140
consensus_9633#1      ------------------------------------------------------------
consensus_9633#2      ------------------------------------------------------------
                                                                                  

consensus_9633#0      GAATTCATCGTACACCAGAACCGATGCTAGCAGACCAACTGGGAATACAGGTCTCCAGCT 1200
consensus_9633#1      ------------------------------------------------------------
consensus_9633#2      ------------------------------------------------------------
                                                                                  

consensus_9633#0      TACCTTGCGCTTCTGCACTGGATGTTCATGGTTTTGCGATGAATTCAGCTTATTACTACC 1260
consensus_9633#1      ------------------------------------------------------------
consensus_9633#2      ------------------------------------------------------------
                                                                                  

consensus_9633#0      ACATAAACACAAGCAAGAGTACTTTGAGAAATCTACATGTGCGTCCCTACCAAAGAGAAG 1320
consensus_9633#1      ------------------------------------------------------------
consensus_9633#2      ------------------------------------------------------------
                                                                                  

consensus_9633#0      GCACACTTGATACTTACCCTCACTCAGTTGAAAGTCCGTTTGGAGTGCAAATTATGGTTC 1380
consensus_9633#1      ---------------------------------GTCCGTTTGGAGTGCAAATTATGATTC 27
consensus_9633#2      ------------------------------------------------------------
                                                                                  

consensus_9633#0      CAGAGGAGCTTAAAAGGGGTTACTATTCTCGAATGCCGAATTCCTTCCATCAGTCAACAA 1440
consensus_9633#1      CAGAGGAGCTTAAAAGGGGTTACTATTCTCGAATGCCGAATTCCTTCCATCAGTCAACAA 87
consensus_9633#2      ------------------------------------------------------------
                                                                                  

consensus_9633#0      CCAAACATAGTCCGGAATATTGCAATGAAGCACCCCACGAGAAGAACCTTTTGAAGAACT 1500
consensus_9633#1      CCAAACATAGTCCGGAATATTGCAATGAAGCACCCCACGAGAAGAACCTTTTGAAGAACT 147
consensus_9633#2      ------------------------------------------------------------
                                                                                  

consensus_9633#0      TTGGTCAACAAAATGCCGTAATTCCTGAAAGTTCTCCTGATCCATTTACAAGGAATACTG 1560
consensus_9633#1      TTGGTCAACAAAATGCCGTAATTCCTGAAAGTTCTCCTGATCCATTTACAAGGAATACTG 207
consensus_9633#2      ------------------------------------------------------------
                                                                                  

consensus_9633#0      ATTGTCATCAAACAAATGGATACATGACGCATGGTCTGAAAACTGCTGAAAGTATTTCTG 1620
consensus_9633#1      ATTGTCATCAAACAAATGGATACATGACGCATGGTCTGAAAACTGCTGAAAGTATTTCTG 267
consensus_9633#2      ------------------------------------------------------------
                                                                                  

consensus_9633#0      AGGTGTTGACCCTTGGTACAGACACCGCTGGCCCTTACAAACACCTATTGGAGCAGT-CT 1679
consensus_9633#1      AGGTGTTGACCCTTGGTACAGACACCGCTGGCCCTTACAAACACCTATTGGAGCAGT-CT 326
consensus_9633#2      -------------CGCTGCCACTGCCACTGCCACTGCCAAGCAAACAGCGCGGCGCCACA 47
                                    * * *     ** *** * **  *** **   *  *  **    * 

consensus_9633#0      GAAACAATGCGTTACCCAGAAGGATTGAAGCTGAAGACTCCTGCCAGCCAGTCAGTTACA 1739
consensus_9633#1      GAAACAATGCGTTACCCAGAAGGATTGAAGCTGAAGACTCCTGCCAGCCAGTCAGTTACA 386
consensus_9633#2      GTAGCAGTA-GCCACCACGCACGCACGC-GTCGGTGCGTGTTCCCCCCCCCCCCCCCACC 105
                      * * ** *  *  ***  * * *   *  *  *  *  *  * **  **   *    ** 

consensus_9633#0      GAAGTTGAAGAAGGTCATAGGTACCCTTTCACATACAAAAGGAGGAAGCTGCAGAAGAGG 1799
consensus_9633#1      GAAGTTGAAGAAGGTCATAGGTACCCTTTCACATACAAAAGGAGGAAGCTGCAGAAGAGG 446
consensus_9633#2      CCCCCGCTACAAATTCATGCTCATCTTTCCCCTCCTCCTCCCTC---TCCTCACCGACGA 162
                              * **  ****    * * ** * *                *  **     * 

consensus_9633#0      CTTGACCTTGTTGATCCTGTCAAGAAATCAACTATGGTGGATTCAGAGCCT-CTGAGCGC 1858
consensus_9633#1      CTTGACCTTGTTGATCCTGTCAAGAAATCAACTATGGTGGATTCAGAGCCT-CTGAGCGC 505
consensus_9633#2      TCGGCCGCCGCCGCCGCACCCGGGATCTTCCGTGGGATAGAATGGTATTGTGCTGGACAC 222
                         * *   *  *   *   *  **  *    *  * * ** *   *   * ***  * *

consensus_9633#0      ACTGGCTAGCGTGGCAAATGTAAAAATCAAAGGCAATCAAGCTTTGAAGATTGGCAGCTG 1918
consensus_9633#1      ACTGGCTAGCGTGGCAAATGTAAAAATCAAAGGCAATCAAGCTTTGAAGATTGGCAGCTG 565
consensus_9633#2      ACTGATGACTTTCGTATGTATGAATATCTCTGATACC---GATCGGAGGATTGG--ACCT 277
                      ****   *   * * *  * * ** ***   *  *     * *  ** ******   *  

consensus_9633#0      AGAACAAGGATAGCTGAACATAGAAATTGGAGCATGGCTTATGAACATCTAGCTAACATA 1978
consensus_9633#1      AGAACAAGGATAGCTGAACATAGAAATTGGAGCATGGCTTATGAACATCTAGCTAACATA 625
consensus_9633#2      CTTCCGTCGATCCATGGGCATTGTGAACGC------------------------------ 307
                          *   ***   **  *** *  *  *                               

consensus_9633#0      GTAAATAAAATGTTCTCTTTTGTTTTGGGTTCTGGTTCGAAGTCAGGTGGAGTGCATTCA 2038
consensus_9633#1      GTAAATAAAATGTTCTCTTTTGTTTTGGGTTCTGGTTCGAAGTCAGGTGGAGTGCATTCA 685
consensus_9633#2      ------------------------------------------------------------
                                                                                  

consensus_9633#0      TTGTTAAATTTGATAGTAGACAAAATGACATGAATCTCTAGTGCAAAGCATTCAGATTCT 2098
consensus_9633#1      TTGTTAAATTTGATAGTAGACAAAATGACATGAATCTTTAGTGCAAAGCATTCAGATTCT 745
consensus_9633#2      ------------------------------------------------------------
                                                                                  

consensus_9633#0      CTGCTTTCTATCATGCACATCCCTCCCTGAATACCTCGTCTTCCAGATGAGCCGCAGTTT 2158
consensus_9633#1      CTGCTTTCTTTCAAAAAAAAAAAG------------------------------------ 769
consensus_9633#2      ------------------------------------------------------------
                                                                                  

consensus_9633#0      ACTTAGATATATACATTGTGTTAATGTTTTTCTTTTAAAATAGTGCT 2205
consensus_9633#1      -----------------------------------------------
consensus_9633#2      -----------------------------------------------
                                                                     




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)