cluster # 9640

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Oryza sativa
cluster # 9640 cluster # 9640 Sequences # 6 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9640#0 length = 1738 sequences # 6
consensusID : consensus_9640#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1738
fasta sequence
                              [CCATTAATTGAGCTCCAGCCGTCCGGGAGACGAGATAATTCCGTTCAATTTCAAGTTAATCCCGCGGCAGCCATGGCTGCGCTTCTCATGAACACCGGCGCTGTCTCGATGCCCTTCCCCACCACGCGCACCGCCGCGCGACGGCGAACCAGCAGAAGCAGATGCCAGGCTTCATCTAGCGGCGGTAGCAGCAACGAAGGAGGCGGCGAGAGCTACCGCGGGAGGAGCGGGCGCGGTGGGTCGACGACGTGGGTNACGGAGTACGACCTGTACGGGCTGCTGGGCGTGGAGCGGTCGTCGCCGCAGTCGGAGATCAAGGCCGCGTACCGGTCGCTGCAGAAGCGGTGCCACCCCGACGTCGCCGGCGCCAAGGGCCACGACATGGCCATCGTCCTCAACGAGGTCTACTCCCTCCTCTCCGACCCCGCCGCCCGCCTCGCCTACGACCAGGAGCAAGCGAAGCAG-TCGGAGTTCGTCGGGTACACGGGGAAGCCGCTCTACTCGGCGTGGTTCGGCGGCGAGGCCGAGCAGCGCGCGGTGTTCGTGGACGAGGTGAGGTGCGTCGGCTGCCTCAAGTGCGCGCTCTACGCCAACAAGACGTTCGCCGTCGAGTCCGTCTACGGCCGCGCCCGCGTCGTCGCGCAGTGGGCCGACGCCGAGGACAAGATCCTCGACGCCATCCAGACATGCCCCGTCGACTGCATCTCGATGGTCGAGAGGTCAGATCTCGCGGCTCTCGAGTTCTTGATGTCCAAACAGCCGCGCGGCAGAGTCCGGGTCTCGGAAGGCAACACCGTGGGCGCTCGCGCACCCGACATCTTCAACGAGGTAAGCAAGTTTCAGAAGAGGTTCCAGGAGATGAAGCAGAAGTCTGCCACGAGAGAATCCGAGGAGTCGGAGGCAGCAAGGCAATCGAGGAGCTCGGCAGTTCAGACGATCAGGTCGATCTCGAACTGGTGGTACTGGCAGCCGTTCAGAGCTCCGGCGACCACCGTACTCGCTTCTCTCCACCTGCCGGCGCCGCCGCCTTCTCCTTCCATGCCCGCCGACCCGGTGACGGACAGGCTCCAAGAAGCGGCAGCTCGACGCAAAGCGGGAGGCGCGACGGCGG-CGAGGACGGTGGCTTCGTACGCCCGCCGCGAC-GACTACTGGACTCCGCAGCTGAACCTGCCGTCCCTAGCATCGCCGCCGGAGCGACCTCACCGGAGGCAGAGCGCTTCTCCTCCCCGCAGCCAGACGCGGCGAGCAACCCCCACCGGCGATGGCGGGGTGACATTGGGCAGCATCGACCTGACGGCGCCGCTGCTGATGGCGATCATCTCGGCCGGGTTCGTGGGTTACAACAGGGAGGAGGTGGCCGGAGTCGGCGGCGGCGGCATCCAGGAGCACGTCGGTGGCGCCGCCGCTCTGGGTCTCGTGAACAGCTTCGAGCTCAAGATCGTCCTAGCCTCCGTGACATGGTTCATCATCGGCGCGGCGATTGCCGGATTCATTCAGTTTCTCGCGAGGAGCGAAGTGAACTTCAGGAAATGAAGCGAATACATGATTTATTCACGATGACATAAAGATACATAGGATA-GATGAAGTATACATAGTAGTATAGATGCATGTATATAAAGGTTACTGCAATTAAGGAATTTATTAGTGGTGAAAAAATGAGATATAAAGTAGAGCAAAATGAAATGTACGAGACGTATAGCATTCAGCTTAAAAAAATTGGACGAGAAATCAGTTCTCT]

[+] EMBL AK068186             [CCATTAATTGAGCTCCAGCCGTCCGGGAGACGAGATAATTCCGTTCAATTTCAAGTTAATCCCGCGGCAGCCATGGCTGCGCTTCTCATGAACACCGGCGCTGTCTCGATGCCCTTCCCCACCACGCGCACCGCCGCGCGACGGCGAACCAGCAGAAGCAGATGCCAGGCTTCATCTAGCGGCGGTAGCAGCAACGAAGGAGGCGGCGAGAGCTACCGCGGGAGGAGCGGGCGCGGTGGGTCGACGACGTGGGTGACGGAGTACGACCTGTACGGGCTGCTGGGCGTGGAGCGGTCGTCGCCGCAGTCGGAGATCAAGGCCGCGTACCGGTCGCTGCAGAAGCGGTGCCACCCCGACGTCGCCGGCGCCAAGGGCCACGACATGGCCATCGTCCTCAACGAGGTCTACTCCCTCCTCTCCGACCCCGCCGCCCGCCTCGCCTACGACCAGGAGCAAGCGAAGCAG TCGGAGTTCGTCGGGTACACGGGGAAGCCGCTCTACTCGGCGTGGTTCGGCGGCGAGGCCGAGCAGCGCGCGGTGTTCGTGGACGAGGTGAGGTGCGTCGGCTGCCTCAAGTGCGCGCTCTACGCCAACAAGACGTTCGCCGTCGAGTCCGTCTACGGCCGCGCCCGCGTCGTCGCGCAGTGGGCCGACGCCGAGGACAAGATCCTCGACGCCATCCAGACATGCCCCGTCGACTGCATCTCGATGGTCGAGAGGTCAGATCTCGCGGCTCTCGAGTTCTTGATGTCCAAACAGCCGCGCGGCAGAGTCCGGGTCTCGGAAGGCAACACCGTGGGCGCTCGCGCACCCGACATCTTCAACGAGGTAAGCAAGTTTCAGAAGAGGTTCCAGGAGATGAAGCAGAAGTCTGCCACGAGAGAATCCGAGGAGTCGGAGGCAGCAAGGCAATCGAGGAGCTCGGCAGTTCAGACGATCAGGTCGATCTCGAACTGGTGGTACTGGCAGCCGTTCAGAGCTCCGGCGACCACCGTACTCGCTTCTCTCCACCTGCCGGCGCCGCCGCCTTCTCCTTCCATGCCCGCCGACCCGGTGACGGACAGGCTCCAAGAAGCGGCAGCTCGACGCAAAGCGGGAGGCGCGACGGCGG CGAGGACGGTGGCTTCGTACGCCCGCCGCGAC GACTACTGGACTCCGCAGCTGAACCTGCCGTCCCTAGCATCGCCGCCGGAGCGACCTCACCGGAGGCAGAGCGCTTCTCCTCCCCGCAGCCAGACGCGGCGAGCAACCCCCACCGGCGATGGCGGGGTGACATTGGGCAGCATCGACCTGACGGCGCCGCTGCTGATGGCGATCATCTCGGCCGGGTTCGTGGGTTACAACAGGGAGGAGGTGGCCGGAGTCGGCGGCGGCGGCATCCAGGAGCACGTCGGTGGCGCCGCCGCTCTGGGTCTCGTGAACAGCTTCGAGCTCAAGATCGTCCTAGCCTCCGTGACATGGTTCATCATCGGCGCGGCGATTGCCGGATTCATTCAGTTTCTCGCGAGGAGCGAAGTGAACTTCAGGAAATGAAGCGAATACATGATTTATTCACGATGACATAAAGATACATAGGATA GATGAAGTATACATAGTAGTATAGATGCATGTATATAAAGGTTACTGCAATTAAGGAATTTATTAGTGGTGAAAAAATGAGATATAAAGTAGAGCAAAATGAAATGTACGAGACGTATAGCATTCAGCTTATGTGGTTTGGACGAGAAATCAGTTCTCT]
[+] EMBL OSS1913A             [                                                                                                                                                           AAGCAGATGCCAGGCTTCATCTAGCGGCGGTAG AGCAACGAAGGAGGCGGCGAGA NTACCGCGGGAGGAGCGGGCGCGNTGGGTCGACGACGTGGGTNACGGAGTACGACCTGTACGGGCTGCTGGGCGTGGAGCGGTCGTCGCCGCAGTCGGAGATCAAGGNCGCGTACCGGTCGCTGCAGAAGCGGTGCCACCCCGACGTCGCCGGCGCCAAGGGCCACGACATGGCCATCGTCCTCAACGAGGTCTACTCCCTCCTCTCCGACCCCGCCGCCCGCCTCGCCTACGACCAGGAGCAAGCG AG AGTTCGGAGTTCGTCGGGTACACGGGGAAGCCG TNTACTNGGCGTTGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL OSS2115A             [                                                                                                                                                           AAGCAGATGCCAGGTTTCATCTAGCGGCGGTA NAGCAACGAAGGAGGCGGCGAGAGCTACCGCGGGAGGAGCGGGCGCGGTGGGTCGACGACGTGGGTNACGGAGTACGACCTGTACGGGCTGCTGGGCGTGGAGCGGTCNTCGCCGCANTCGGAGATCAAGGCCGCNTACCGNTCGCTGCAGAAGCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL BQ907788             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               CGAC GCGGCCGAGGACGGTGGCTTCGTACGCCCGCCGCGACTGACTACTGGACTCCGCAGCTGAACCT CCGTCCCTAGCATCGCCGCCGGAGCGACCTCACCGGAGGCAGAGCGCTT   CTCCCCGCAGCCAGACGCGGCGAGCAACCCCCACCGGCGAT GCGGGGTGACATTGGGCAGCATCGACCTGACGGCGCCGCTGCTGATGGCGATCATCTCGGCCGGGTTCGTGGGTTACAACAGGGAGGAGGTGGCCGGAGTCGGCGGCGGCGGCATCCAGGAGCACGTCGGTGGCGCCGCCGCTCTGGGTCTCGTGAACAGCTTCGAGCTCAAGATCGTCCTAGCCTCCGTGACATGGTTCATCATCGGCGCGGCGATTGCCGGATTCATTCAGTTTCTCGCGAGGAGCGAAGTGAACTTCAGGAAATGAAGCGAATACATGATTTATTCACGATGACAT AAGATACATAGGATATGTTG  CCATAC  AGTAGTATAGATGCATGTATATAAAGGTTACTGCAATTAAGGAATTTATTAGTGGTGAAAAAAaa                                                                                ]
[+] EMBL AU174229             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ACATTGGGCAGCATCGACCTGACGGCGCCGCTGCTGATGGCGATCATCTCGGCCGGGTTCGTGGGTTACAACAGGGAGGAGGTGGCCGGAGTCGGCGGCGGCGGCATCCAGGAGCACGTCGGTGGCGCCGCCGCTCTGGGTCTCGTGAACAGCTTCGAGCTCAAGATCGTCCTAGCCTCCGTGACATGGTTCATCATCGGCGCGGCGATTGCCGGATTCATTCAGTTTCTCGCGAGGAGCGAAGTGAACTTCAGGAAATGAAGCGAATACATGATTTATTCACGATGACATAAAGATACATAGGATA GATGAAGTATACATAGTAGTATAGATGCATGTATATAAAGGTTACTGCAATTAAGGAATTTATTAGTGGTGAAAAAATGAGATATAAAGTAGAGCAAAATGAAATGTACGAGACGTATAGCATTCAGCTTAAAAAAA                      ]
[+] EMBL AU222946             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  GCAGCATCGACCTGACGGCGCCGCTGCTGATGGCGATCATCTCGGCCGGGTTCGTGGGTTACAACAGGGAGGAGGTGGCCGGAGTCGGCGGCGGCGGCATCCAGGAGCACGTCGGTGGCGCCGCCGCTCTGGGTCTCGTGAACAGCTTCGAGCTCAAGATCGTCCTAGCCTCCGTGACATGGTTCATCATCGGCGCGGCGATTGCCGGATTCATTCAGTTTCTCGCGAGGAGCGAAGTGAACTTCAGGAAATGAAGCGAATACATGATTTATTCACGATGACATAAAGATACATAGGATA GATGAAGTATACATAGTAGTATAGATGCATGTATATAAAGGTTACTGCAATTAAGGAATTTATTAGTGGTGAAAAAATGAGATATAAAGTAGAGCAAAATGAAATGTACGAGACGTATAGCATTCAGCTTAAAAAAA                      ]




>consensus_9640#0
CCATTAATTGAGCTCCAGCCGTCCGGGAGACGAGATAATTCCGTTCAATTTCAAGTTAAT
CCCGCGGCAGCCATGGCTGCGCTTCTCATGAACACCGGCGCTGTCTCGATGCCCTTCCCC
ACCACGCGCACCGCCGCGCGACGGCGAACCAGCAGAAGCAGATGCCAGGCTTCATCTAGC
GGCGGTAGCAGCAACGAAGGAGGCGGCGAGAGCTACCGCGGGAGGAGCGGGCGCGGTGGG
TCGACGACGTGGGTNACGGAGTACGACCTGTACGGGCTGCTGGGCGTGGAGCGGTCGTCG
CCGCAGTCGGAGATCAAGGCCGCGTACCGGTCGCTGCAGAAGCGGTGCCACCCCGACGTC
GCCGGCGCCAAGGGCCACGACATGGCCATCGTCCTCAACGAGGTCTACTCCCTCCTCTCC
GACCCCGCCGCCCGCCTCGCCTACGACCAGGAGCAAGCGAAGCAGTCGGAGTTCGTCGGG
TACACGGGGAAGCCGCTCTACTCGGCGTGGTTCGGCGGCGAGGCCGAGCAGCGCGCGGTG
TTCGTGGACGAGGTGAGGTGCGTCGGCTGCCTCAAGTGCGCGCTCTACGCCAACAAGACG
TTCGCCGTCGAGTCCGTCTACGGCCGCGCCCGCGTCGTCGCGCAGTGGGCCGACGCCGAG
GACAAGATCCTCGACGCCATCCAGACATGCCCCGTCGACTGCATCTCGATGGTCGAGAGG
TCAGATCTCGCGGCTCTCGAGTTCTTGATGTCCAAACAGCCGCGCGGCAGAGTCCGGGTC
TCGGAAGGCAACACCGTGGGCGCTCGCGCACCCGACATCTTCAACGAGGTAAGCAAGTTT
CAGAAGAGGTTCCAGGAGATGAAGCAGAAGTCTGCCACGAGAGAATCCGAGGAGTCGGAG
GCAGCAAGGCAATCGAGGAGCTCGGCAGTTCAGACGATCAGGTCGATCTCGAACTGGTGG
TACTGGCAGCCGTTCAGAGCTCCGGCGACCACCGTACTCGCTTCTCTCCACCTGCCGGCG
CCGCCGCCTTCTCCTTCCATGCCCGCCGACCCGGTGACGGACAGGCTCCAAGAAGCGGCA
GCTCGACGCAAAGCGGGAGGCGCGACGGCGGCGAGGACGGTGGCTTCGTACGCCCGCCGC
GACGACTACTGGACTCCGCAGCTGAACCTGCCGTCCCTAGCATCGCCGCCGGAGCGACCT
CACCGGAGGCAGAGCGCTTCTCCTCCCCGCAGCCAGACGCGGCGAGCAACCCCCACCGGC
GATGGCGGGGTGACATTGGGCAGCATCGACCTGACGGCGCCGCTGCTGATGGCGATCATC
TCGGCCGGGTTCGTGGGTTACAACAGGGAGGAGGTGGCCGGAGTCGGCGGCGGCGGCATC
CAGGAGCACGTCGGTGGCGCCGCCGCTCTGGGTCTCGTGAACAGCTTCGAGCTCAAGATC
GTCCTAGCCTCCGTGACATGGTTCATCATCGGCGCGGCGATTGCCGGATTCATTCAGTTT
CTCGCGAGGAGCGAAGTGAACTTCAGGAAATGAAGCGAATACATGATTTATTCACGATGA
CATAAAGATACATAGGATAGATGAAGTATACATAGTAGTATAGATGCATGTATATAAAGG
TTACTGCAATTAAGGAATTTATTAGTGGTGAAAAAATGAGATATAAAGTAGAGCAAAATG
AAATGTACGAGACGTATAGCATTCAGCTTAAAAAAATTGGACGAGAAATCAGTTCTCT
clustalw multiple alignements is not computed in this case