cluster # 9653

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Oryza sativa
cluster # 9653 cluster # 9653 Sequences # 6 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9653#0 length = 1308 sequences # 6
consensusID : consensus_9653#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1308
fasta sequence
                              [TCGCCCGCCTCCGAGCAGTTGGGGAAGAGAACCGAAGCACAAACCCTAGCGGCGGCGCAGCTCAGCCGGGGTTTGCGGAGGAAGGGGAGGGGCACCGCCCGCGATGCTCGCGGCGTCGGCTCGGCGGGTGGCGGCCGCCGCCGCCGCGTCGTCCTCCCATTCCAGGCTCGCCAACCAGCTCGCCCACGCGCTGAATCCGCAGAGGTGGATCCATGACCGGAACAAGAAGGCGATGGAGTTGGTGGCCAAGGGGTGGAGCGCCCTGCAGGAGGTTGATCGCGTCATCGACTACGCCGACCGCAACGACAAGCGCCTGATCCCACTTCTCAGGGGTGCAAAGGAAAATTTTGAGCTGGCTCTGGAGATCGACAATATGAACACTCATGCGAGATTATGGCTTGCCAAGATGCATTTCAAGTATCATGTTCCTGGAGCTTGTAAGGCCATTGGTGCTGCTCTGTTGGTTGAAGCTGCAAACATGGGTGATCCAGATGCACAGTATGAACTTGGATGCCATTTGAGAATTGAGAATGACTACGTTCACTCTGACCAACAGGCTTTTTATTACATTGAGAAAGCTGTTGACCAGTTGCACCCTGGTGCTTTGTATCTTCTAGGTGCTGTATATTTAACTGGAGACTGTGTTAAGAGGGATATAGCTTCAGCAATGTGGTGTTTCCACAGAGCATCAGAAAAGGGACACTCTGGAGCTGCAATTGCATATGGATCACTTCTATTAAAAGGTGCTGAAGTGCCTGAGGTTATTACCAGGTTCAACTCAGGTAAGAGTCCATCAACTGGAAAGATGCGAAAAAGGCCCATACAGCA-GGATCCAGTGAAGC-TAGCAAAGGAGCAGTTTCAAA-TTGCAGCTGAAGCTGGATGTGATCTCGGTTTGCGATGGCTGAAGAGGCTTGGGGATTATGAAAAGCAGCAAGAACAACCAAAGCAAATCCAGCAATGACCACCTTCGAAATGATTTGCTTCACTTCGGCATTGCTCTATGTTGACATGCGTTTGTCATACACACTATACAGGTAGAACGTCAGATTCTCAACTGTAATCATGTAATTGAATCCAAGCACTATGTAAATTTTGATATCTGGCCCAACTCCTTGAAAAGGTAGACTTGAGTTGATCCCCTTTCTCTACAAAGGATTTTTATCGTACCAGTCCTTATAGAGTTCGTTACTTTGTTTTTTCACTTTTTCTCCCCAACTGTCTACTGGTATAACCTGTTACATGTCCCTTAATTATTCCCCGGTGTGTCAGAAAAGTGTTTAAATTCAAGCATACATGAAAAAACTGGAC]

[+] EMBL AK068376             [TCGCCCGCCTCCGAGCAGTTGGGGAAGAGAACCGAAGCACAAACCCTAGCGGCGGCGCAGCTCAGCCGGGGTTTGCGGAGGAAGGGGAGGGGCACCGCCCGCGATGCTCGCGGCGTCGGCTCGGCGGGTGGCGGCCGCCGCCGCCGCGTCGTCCTCCCATTCCAGGCTCGCCAACCAGCTCGCCCACGCGCTGAATCCGCAGAGGTGGATCCATGACCGGAACAAGAAGGCGATGGAGTTGGTGGCCAAGGGGTGGAGCGCCCTGCAGGAGGTTGATCGCGTCATCGACTACGCCGACCGCAACGACAAGCGCCTGATCCCACTTCTCAGGGGTGCAAAGGAAAATTTTGAGCTGGCTCTGGAGATCGACAATATGAACACTCATGCGAGATTATGGCTTGCCAAGATGCATTTCAAGTATCATGTTCCTGGAGCTTGTAAGGCCATTGGTGCTGCTCTGTTGGTTGAAGCTGCAAACATGGGTGATCCAGATGCACAGTATGAACTTGGATGCCATTTGAGAATTGAGAATGACTACGTTCACTCTGACCAACAGGCTTTTTATTACATTGAGAAAGCTGTTGACCAGTTGCACCCTGGTGCTTTGTATCTTCTAGGTGCTGTATATTTAACTGGAGACTGTGTTAAGAGGGATATAGCTTCAGCAATGTGGTGTTTCCACAGAGCATCAGAAAAGGGACACTCTGGAGCTGCAATTGCATATGGATCACTTCTATTAAAAGGTGCTGAAGTGCCTGAGGTTATTACCAGGTTCAACTCAGGTAAGAGTCCATCAACTGGAAAGATGCGAAAAAGGCCCATACAGCA GGATCCAGTGAAGC TAGCAAAGGAGCAGTTTCAAA TTGCAGCTGAAGCTGGATGTGATCTCGGTTTGCGATGGCTGAAGAGGCTTGGGGATTATGAAAAGCAGCAAGAACAACCAAAGCAAATCCAGCAATGACCACCTTCGAAATGATTTGCTTCACTTCGGCATTGCTCTATGTTGACATGCGTTTGTCATACACACTATACAGGTAGAACGTCAGATTCTCAACTGTAATCATGTAATTGAATCCAAGCACTATGTAAATTTTGATATCTGGCCCAACTCCTTGAAAAGGTAGACTTGAGTTGATCCCCTTTCTCTACAAAGGATTTTTATCGTACCAGTCCTTATAGAGTTCGTTACT                                                                                                                      ]
[+] EMBL AK101844             [                            GAACCGAAGCACAAACCCTAGCGGCGGCGCAGCTCAGCCGGGGTTTGCGGAGGAAGGGGAGGGGCACCGCCCGCGATGCTCGCGGCGTCGGCTCGGCGGGTGGCGGCCGCCGCCGCCGCGTCGTCCTCCCATTCCAGGCTCGCCAACCAGCTCGCCCACGCGCTGAATCCGCAGAGGTGGATCCATGACCGGAACAAGAAGGCGATGGAGTTGGTGGCCAAGGGGTGGAGCGCCCTGCAGGAGGTTGATCGCGTCATCGACTACGCCGACCGCAACGACAAGCGCCTGATCCCACTTCTCAGGGGTGCAAAGGAAAATTTTGAGCTGGCTCTGGAGATCGACAATATGAACACTCATGCGAGATTATGGCTTGCCAAGATGCATTTCAAGTATCATGTTCCTGGAGCTTGTAAGGCCATTGGTGCTGCTCTGTTGGTTGAAGCTGCAAACATGGGTGATCCAGATGCACAGTATGAACTTGGATGCCATTTGAGAATTGAGAATGACTACGTTCACTCTGACCAACAGGCTTTTTATTACATTGAGAAAGCTGTTGACCAGTTGCACCCTGGTGCTTTGTATCTTCTAGGTGCTGTATATTTAACTGGAGACTGTGTTAAGAGGGATATAGCTTCAGCAATGTGGTGTTTCCACAGAGCATCAGAAAAGGGACACTCTGGAGCTGCAATTGCATATGGATCACTTCTATTAAAAGGTGCTGAAGTGCCTGAGGTTATTACCAGGTTCAACTCAGGTAAGAGTCCATCAACTGGAAAGATGCGAAAAAGGCCCATACAGCA GGATCCAGTGAAGC TAGCAAAGGAGCAGTTTCAAA TTGCAGCTGAAGCTGGATGTGATCTCGGTTTGCGATGGCTGAAGAGGCTTGGGGATTATGAAAAGCAGCAAGAACAACCAAAGCAAATCCAGCAATGACCACCTTCGAAATGATTTGCTTCACTTCGGCATTGCTCTATGTTGACATGCGTTTGTCATACACACTATACAGGTAGAACGTCAGATTCTCAACTGTAATCATGTAATTGAATCCAAGCACTATGTAAATTTTGATATCTGGCCCAACTCCTTGAAAAGGTAGACTTGAGTTGATCCCCTTTCTCTACAAAGGATTTTTATCGTACCAGTCCTTATAGAGTTCGTTACTTTGTTTTTTCACTTTTTCTCCCCAACTGTCTACTGGTATAACCTGTTACATGTCCCTTAATTATTCCCCGGTGTGTCAGAAAAGTGTTTAAATTCAAGCATACATGAAAAAACTGGAC]
[+] EMBL AK099277             [                            GAACCGAAGCACAAACCCTAGCGGCGGCGCAGCTCAGCCGGGGTTTGCGGAGGAAGGGGAGGGGCACCGCCCGCGATGCTCGCGGCGTCGGCTCGGCGGGTGGCGGCCGCCGCCGCCGCGTCGTCCTCCCATTCCAGGCTCGCCAACCAGCTCGCCCACGCGCTGAATCCGCAGAGGTGGATCCATGACCGGAACAAGAAGGCGATGGAGTTGGTGGCCAAGGGGTGGAGCGCCCTGCAGGAGGTTGATCGCGTCATCGACTACGCCGACCGCAACGACAAGCGCCTGATCCCACTTCTCAGGGGTGCAAAGGAAAATTTTGAGCTGGCTCTGGAGATCGACAATATGAACACTCATGCGAGATTATGGCTTGCCAAGATGCATTTCAAGTATCATGTTCCTGGAGCTTGTAAGGCCATTGGTGCTGCTCTGTTGGTTGAAGCTGCAAACATGGGTGATCCAGATGCACAGTATGAACTTGGATGCCATTTGAGAATTGAGAATGACTACGTTCACTCTGACCAACAGGCTTTTTATTACATTGAGAAAGCTGTTGACCAGTTGCACCCTGGTGCTTTGTATCTTCTAGGTGCTGTATATTTAACTGGAGACTGTGTTAAGAGGGATATAGCTTCAGCAATGTGGTGTTTCCACAGAGCATCAGAAAAGGGACACTCTGGAGCTGCAATTGCATATGGATCACTTCTATTAAAAGGTGCTGAAGTGCCTGAGGTTATTACCAGGTTCAACTCAGGTAAGAGTCCATCAACTGGAAAGATGCGAAAAAGGCCCATACAGCA GGATCCAGTGAAGC TAGCAAAGGAGCAGTTTCAAA TTGCAGCTGAAGCTGGATGTGATCTCGGTTTGCGATGGCTGAAGAGGCTTGGGGATTATGAAAAGCAGCAAGAACAACCAAAGCAAATCCAGCAATGACCACCTTCGAAATGATTTGCTTCACTTCGGCATTGCTCTATGTTGACATGCGTTTGTCATACACACTATACAGGTAGAACGTCAGATTCTCAACTGTAATCATGTAATTGAATCCAAGCACTATGTAAATTTTGATATCTGGCCCAACTCCTTGAAAAGGTAGACTTGAGTTGATCCCCTTTCTCTACAAAGGATTT                                                                                                                                                      ]
[-] EMBL AU175049             [                                                                                                                                                    TCGTCCTCCCATTCCAGGCTCGCCAACCAGCTCGCCCACGCGCTGAATCCGCAGAGGTGGATCCATGACCGGAACAAGAAGGCGATGGAGTTGGTGGCCAAGGGGTGGAGCGCCCTGCAGGAGGTTGATCGCGTCATCGACTACGCCGACCGCAACGACAAGCGCCTGATCCCACTTCTCAGGGGTGCAAAGGAAAATTTTGAGCTGGCTCTGGAGATCGACAATATGAACACTCATGCGAGATTATGGCTTGCCAAGATGCATTTCAAGTATCATGTTCCTGGAGCTTGTAAGGCCATTGGTGCTGCTCTGTTGGTTGAAGCTGCAAACATGGGTGATCCAGATGCACAGTATGAACTTGGATGCCATTTGAGAATTGAGAATGACTACGTTCACTCTGACCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CF303248             [                                                                                                                                                                                       CCACGCGCTGAATCCGCAGAGGTGGATCCATGACCGGAACAAGAAGGCGATGGAGTTGGTGGCCAAGGGGTGGAGCGCCCTGCAGGAGGTTGATCGCGTCATCGACTACGCCGACCGCAACGACAAGCGCCTGATCCCACTTCTCAGGGGTGCAAAGGAAAATTTTGAGCTGGCTCTGGAGATCGACAATATGAACACTCATGCGAGATTATGGCTTGCCAAGATGCATTTCAAGTATCATGTTCCTGGAGCTTGTAAGGCCATTGGTGCTGCTCTGTTGGTTGAAGCTGCAAACATGGGTGATCCAGATGCACAGTATGAACTTGGATGCCATTTGAGAATTGAGAATGACTACGTTCACTCTGACCAACAGGCTTTTTATTACATTGAGAAAGCTGTTGACCAGTTGCACCCTGGTGCTTTGTATCTTCTAGGTGCTGTATATTTAACTGGAGACTGTGTTAAGAGGGATATAGCTTCAGCAATGTGGTGTTTCCACAGAGCATCAGAAAAGGGACACTCTGGAGCTGCAATTGCATATGGATCACTTCTATTAAAAGGTGCTGAAGTGCCTGAGGTTATTACCAGGTTCAACTCAGGTAAGAGTCCATCAAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL C28698               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                cCCCANACAGCAGGGATCCAGTGAAGCTTAGCAAAGGAGCAGTTTNAAATTTGCA CTGAAGCTGGATGTGATCTCGGTTTGCGATGGCTGAAGAGGCTTGGGGATTATGAAAAGCAGCAAGAACAACCAAAGCAAATCCAGCAATGACCACCTTCGAAATGATTTGCTTCACTTCGGCATTGCTCTATGTTGACATGCGTTTGTCATACACACTATACAGGTAGAACGTCAGATTCTCAACTGTAATCATGTAATTGAATCCAAGCACTATGTAAATTTTGATATCTGGCCCAACTCCTTGAAAAGGTAGACTTGAGTTGATCCCCTTTCTCTACAAAGGATTTTTATCGTACCAGTCCTTATAGAGTTCGTTACTTTGTTTTTTCACTTTTTCTCCCCAACTGTCTACTGGT                                                                                 ]




>consensus_9653#0
TCGCCCGCCTCCGAGCAGTTGGGGAAGAGAACCGAAGCACAAACCCTAGCGGCGGCGCAG
CTCAGCCGGGGTTTGCGGAGGAAGGGGAGGGGCACCGCCCGCGATGCTCGCGGCGTCGGC
TCGGCGGGTGGCGGCCGCCGCCGCCGCGTCGTCCTCCCATTCCAGGCTCGCCAACCAGCT
CGCCCACGCGCTGAATCCGCAGAGGTGGATCCATGACCGGAACAAGAAGGCGATGGAGTT
GGTGGCCAAGGGGTGGAGCGCCCTGCAGGAGGTTGATCGCGTCATCGACTACGCCGACCG
CAACGACAAGCGCCTGATCCCACTTCTCAGGGGTGCAAAGGAAAATTTTGAGCTGGCTCT
GGAGATCGACAATATGAACACTCATGCGAGATTATGGCTTGCCAAGATGCATTTCAAGTA
TCATGTTCCTGGAGCTTGTAAGGCCATTGGTGCTGCTCTGTTGGTTGAAGCTGCAAACAT
GGGTGATCCAGATGCACAGTATGAACTTGGATGCCATTTGAGAATTGAGAATGACTACGT
TCACTCTGACCAACAGGCTTTTTATTACATTGAGAAAGCTGTTGACCAGTTGCACCCTGG
TGCTTTGTATCTTCTAGGTGCTGTATATTTAACTGGAGACTGTGTTAAGAGGGATATAGC
TTCAGCAATGTGGTGTTTCCACAGAGCATCAGAAAAGGGACACTCTGGAGCTGCAATTGC
ATATGGATCACTTCTATTAAAAGGTGCTGAAGTGCCTGAGGTTATTACCAGGTTCAACTC
AGGTAAGAGTCCATCAACTGGAAAGATGCGAAAAAGGCCCATACAGCAGGATCCAGTGAA
GCTAGCAAAGGAGCAGTTTCAAATTGCAGCTGAAGCTGGATGTGATCTCGGTTTGCGATG
GCTGAAGAGGCTTGGGGATTATGAAAAGCAGCAAGAACAACCAAAGCAAATCCAGCAATG
ACCACCTTCGAAATGATTTGCTTCACTTCGGCATTGCTCTATGTTGACATGCGTTTGTCA
TACACACTATACAGGTAGAACGTCAGATTCTCAACTGTAATCATGTAATTGAATCCAAGC
ACTATGTAAATTTTGATATCTGGCCCAACTCCTTGAAAAGGTAGACTTGAGTTGATCCCC
TTTCTCTACAAAGGATTTTTATCGTACCAGTCCTTATAGAGTTCGTTACTTTGTTTTTTC
ACTTTTTCTCCCCAACTGTCTACTGGTATAACCTGTTACATGTCCCTTAATTATTCCCCG
GTGTGTCAGAAAAGTGTTTAAATTCAAGCATACATGAAAAAACTGGAC
clustalw multiple alignements is not computed in this case