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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9656#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 3484 fasta sequence
[GAGGCCTGATCACCACCCTCTCTCCTCCCCTTTCCCTGACCCCGCGACCGCGCCGCGCGAGGCGAACTCGCCACTCCGATCTCTCTCTCCGGCGACGCCGCCGCCGCCGCACAGGGTTTTGCTCTCTCTCGCGCGGAATGGAGAGCGGCGGGGTCGACGGCGAGAGGCCCCTGCTGCGCGAGGCGGGGGATTTGGGTGGCGAGGACGGCGGCGCAGGCGGAGTCCCCGAGGAGGGGGATGCGAAGGGCGATGTGATGGCGGCGGCGGCGGCGCAGGGGGGCGATGGCGATGAGGGTGTGGAGGCGGTAGATGGGGACGGGAGTAACGAGGAGGAGGAGGTTGTGCAGACGCCCGATGTGAAGCAGACGCCCGGCGCCGCGGCCGCGGCGGCCTGGCGGGAGGCGGCGTGGGAGGAGGCTGACGGCGAGGAGTTCGTGGATGTCTTGGAAGGGGACGTGGATGAGAAGCGTGAGGATGGATCGGCCTTGGAGAATGGGGAGGATTTGTTGGCCTCCCGTTCTCTCGCTGTCGAGGGTGACGAAGAAGGGTATGGTTCTTGTGCTGATATTGGTATAGAAGAAGACGCTGAGGGTGATGCGAGTCGGGAGCGCTTGGAGGAGGAAGCCATGACGGAATCAATCAGGGAGTATGTGACAGAAGCTGTTTTGGCTGACCATATCCAGGAGCAACCGGACAAATCGAAGAGTGAATCTGAACATGTGAAGGTTGCTCAGCACAAGTCGCAGATTGCGAAGAGCAGGGAAGAGGGACCCAAACAATCTGGAGGCGAACCGTCCGTTGTTGTCGAGGAATTGAATGGATCAAGCTCGTCTGATGATGAGAGTAAAGCTACCTCCGCTCCTCCTGCACGATCCATTAGTGGTGCTGCAGGTCGTTCTAATGGCCCCTCTTTGCCATCTCGTCCTGCTGGGCTTGGAGCATCGACTTCCTTGTCGCAGCCCTCAGCTCGACCTGTTCAGCAGACCCGCGCTAATGGTCCAGTCGCTGTGGACAGAGAAACTCGGCAGGATGTTGAATCTCCTGAGGATGGAGACGAAAATGATGAAATCCGTGAGAAACTCCAGATGATCCGGGTTAAGTTTCTGCGTCTTGCTAACAGGTTTGGGCAAACACCTAATAATATGGTGGTTTCTCAGGTTCTTTACCGACTTGGGCTGGCAGAACAGCTTAGAAGAAATACAGGCCAGGGTGTTTTTAGTTTTGACCGGGCACAAGATATGGCAGAACGTCTTGAAGCTGCTGGAAACGAGCCCCTTGATTTTTCTTGCACCATCTTGGTTCTTGGTAAAACTGGGGTTGGCAAGAGTGCTACCATCAATTCTATTTTTGATGATGTCCGGTTGGAAACAAATGCTTTTGATACCAGCACTAGAAAGGTTCAAGAAGTAGTTGGTGCAGTTGAGGGAATCAAAGTAAAAGTTATCGATACTCCTGGCCTGTCATGCTCATCTTCAGACCAGCACCACAACCAGAAGATTCTCAATTCTGTCAAGCGACTTATCAGCAGAAACCCTCCTGATATTGTTCTTTATTTTGATAGACTGGATATGCAGACCAGGGACTATGGTGATGTGCCTCTTCTGCAAACCATTACAAGAGTCTTTGGAGCATCAATCTGGTTCAATGCCATAGTTGTGCTAACTCATGCTGCATCTGCACCACCTGATGGTCTGAATGGAATTCCCCTGAGCTATGAGATGTTTGTAACCCAAAGGTCTCATGTAGTCCAGCAAGCTATAAGGCAAGCCGCTGGTGATGTCCGTCTTATGAATCCAGTGTCCCTGGTTGAAAACCACTCAGCGTGCAGGACCAATAGGGCAGGCCAGAGGGTGTTGCCAAATGGGCATGTCTGGAAACCACAGTTGCTATTGCTTTGTTTTGCCTCAAAGGTTTTAGCAGAGGCCAACGCGCTTCTCAAGCTGCAGGACAATCCTGCTGGTAAACCTCGTATGAGGATTCCTCCACTTCCTTTCCTATTGTCTTCGCTTCTTCAGTCTCGAGCCCCACTGAAGTTACCAGAGGAGCAGTTTGGTGATGATGATGATATTGAAGACGATTTGGCTGATGATTCGGATTCAGATGATGGTTCAGACTATGATGACTTGCCTCCTTTTAAACGCCTCACAAAAGCTCAGCTTGCAAAGCTAAACCATGCTCAGAGGAAGGCATATCTTGAGGAGCTGGATTACAGAGAGAAGTTATTCTACAAAAAACAGCTAAAGGAGGAAAGGATGCGCCGTAAAATAATGAAGAAAATGGCAGCAGAGGCCAGTGCAAGAACAGATGACTTCAGTAACAGCAATCTTGAAGATGATGGCAGTGCTCCAACAAATGTTGCAGTGCCTATGCCCGACATGGTATTGCCCTCATCGTTTGATTCTGACCATCCTAGCCATCGCTATCGTTTCGTGGACACACCAAGTGAATGGCTTGTCAGGCCAGTGCTGGAGACCCAGGGATGGGATCATGATGTTGGTTATGAAGGTCTAAATGTTGAAAGGTTGTTTGCTGTGAAAGGTAAAGTTCCTTTATCAGTGTCTGGTCAACTTTCAAAAGACAAGAAGGATTGCTCCCTCCAAATGGAGGTCGCAAGTTCACTTAAGCACGGTGAGGGGAAAACCACTTCACTGGGGCTTGATTTGCAGTCTGTTGGCAAGGACATGGCATACACTCTTCGTGGCGAGTCGAGGTTTAAAAACTTCAGGCGCAATAACACGGCTGCTGGGATATCCGCCACACTCCTTGGAGATTCTGTATCCGCTGGTGTGAAGGTTGAAGACAAGCTTGTTGTGAACAAGCAGCTCAGGGTTCTGGTTAGTGGAGGCGCTATGAGCGGGAGGGGAGATGTGGCTTACGGAGGGCGGCTTGAAGCAACATTGAAAGACAAAGATTACCCAATTGGCCGCATGCTTTCTACCATAGCGCTCTCTGTTGTTGATTGGCATGGGGATCTTGCTGTTGGCTGCAACATCCAGTCTCAGATTCCTGCTGGAAGAGCTAGCAATTTGATTGGTCATGCGAATCTAAGCAACAAGGGAACTGGTCAAGTTGGCATTCGCCTCAACAGCTCGGAGCATCTTGAGATCGCCCTTATTGCCCTCGTGCCAATATACCAAAACATCAAGAAGTTATTG-CAGAGTTAATCCGTATCAACCAGTATTTATGTAAGCGAGAAAAGGCAGCAAGATAAATCCATTAGAGTTAATGCAAGCATAAATTAGAACTAGAGTTAATGCAAGCATAAATTAGAACTATCTATTTATTTTCTTCTTCCCTTACCTACACGTAATAGTGTTTTCTTCCAAGTTTTTTTT--TTTTTGATGAAGTTGGATTTGCAGAACACATCCTTTTCAGGATTTTTGTTGTTATCCTTGTACTCTCAATAGCTGATAAGAAAAAAAAATGCACTGCTGTTTTGAAGGC-TGCAAAAAAAAAAAAAAAAANAANAAANGGGGGGGCCCCN]
[+] EMBL AK072270 [GAGGCCTGATCACCACCCTCTCTCCTCCCCTTTCCCTGACCCCGCGACCGCGCCGCGCGAGGCGAACTCGCCACTCCGATCTCTCTCTCCGGCGACGCCGCCGCCGCCGCACAGGGTTTTGCTCTCTCTCGCGCGGAATGGAGAGCGGCGGGGTCGACGGCGAGAGGCCCCTGCTGCGCGAGGCGGGGGATTTGGGTGGCGAGGACGGCGGCGCAGGCGGAGTCCCCGAGGAGGGGGATGCGAAGGGCGATGTGATGGCGGCGGCGGCGGCGCAGGGGGGCGATGGCGATGAGGGTGTGGAGGCGGTAGATGGGGACGGGAGTAACGAGGAGGAGGAGGTTGTGCAGACGCCCGATGTGAAGCAGACGCCCGGCGCCGCGGCCGCGGCGGCCTGGCGGGAGGCGGCGTGGGAGGAGGCTGACGGCGAGGAGTTCGTGGATGTCTTGGAAGGGGACGTGGATGAGAAGCGTGAGGATGGATCGGCCTTGGAGAATGGGGAGGATTTGTTGGCCTCCCGTTCTCTCGCTGTCGAGGGTGACGAAGAAGGGTATGGTTCTTGTGCTGATATTGGTATAGAAGAAGACGCTGAGGGTGATGCGAGTCGGGAGCGCTTGGAGGAGGAAGCCATGACGGAATCAATCAGGGAGTATGTGACAGAAGCTGTTTTGGCTGACCATATCCAGGAGCAACCGGACAAATCGAAGAGTGAATCTGAACATGTGAAGGTTGCTCAGCACAAGTCGCAGATTGCGAAGAGCAGGGAAGAGGGACCCAAACAATCTGGAGGCGAACCGTCCGTTGTTGTCGAGGAATTGAATGGATCAAGCTCGTCTGATGATGAGAGTAAAGCTACCTCCGCTCCTCCTGCACGATCCATTAGTGGTGCTGCAGGTCGTTCTAATGGCCCCTCTTTGCCATCTCGTCCTGCTGGGCTTGGAGCATCGACTTCCTTGTCGCAGCCCTCAGCTCGACCTGTTCAGCAGACCCGCGCTAATGGTCCAGTCGCTGTGGACAGAGAAACTCGGCAGGATGTTGAATCTCCTGAGGATGGAGACGAAAATGATGAAATCCGTGAGAAACTCCAGATGATCCGGGTTAAGTTTCTGCGTCTTGCTAACAGGTTTGGGCAAACACCTAATAATATGGTGGTTTCTCAGGTTCTTTACCGACTTGGGCTGGCAGAACAGCTTAGAAGAAATACAGGCCAGGGTGTTTTTAGTTTTGACCGGGCACAAGATATGGCAGAACGTCTTGAAGCTGCTGGAAACGAGCCCCTTGATTTTTCTTGCACCATCTTGGTTCTTGGTAAAACTGGGGTTGGCAAGAGTGCTACCATCAATTCTATTTTTGATGATGTCCGGTTGGAAACAAATGCTTTTGATACCAGCACTAGAAAGGTTCAAGAAGTAGTTGGTGCAGTTGAGGGAATCAAAGTAAAAGTTATCGATACTCCTGGCCTGTCATGCTCATCTTCAGACCAGCACCACAACCAGAAGATTCTCAATTCTGTCAAGCGACTTATCAGCAGAAACCCTCCTGATATTGTTCTTTATTTTGATAGACTGGATATGCAGACCAGGGACTATGGTGATGTGCCTCTTCTGCAAACCATTACAAGAGTCTTTGGAGCATCAATCTGGTTCAATGCCATAGTTGTGCTAACTCATGCTGCATCTGCACCACCTGATGGTCTGAATGGAATTCCCCTGAGCTATGAGATGTTTGTAACCCAAAGGTCTCATGTAGTCCAGCAAGCTATAAGGCAAGCCGCTGGTGATGTCCGTCTTATGAATCCAGTGTCCCTGGTTGAAAACCACTCAGCGTGCAGGACCAATAGGGCAGGCCAGAGGGTGTTGCCAAATGGGCATGTCTGGAAACCACAGTTGCTATTGCTTTGTTTTGCCTCAAAGGTTTTAGCAGAGGCCAACGCGCTTCTCAAGCTGCAGGACAATCCTGCTGGTAAACCTCGTATGAGGATTCCTCCACTTCCTTTCCTATTGTCTTCGCTTCTTCAGTCTCGAGCCCCACTGAAGTTACCAGAGGAGCAGTTTGGTGATGATGATGATATTGAAGACGATTTGGCTGATGATTCGGATTCAGATGATGGTTCAGACTATGATGACTTGCCTCCTTTTAAACGCCTCACAAAAGCTCAGCTTGCAAAGCTAAACCATGCTCAGAGGAAGGCATATCTTGAGGAGCTGGATTACAGAGAGAAGTTATTCTACAAAAAACAGCTAAAGGAGGAAAGGATGCGCCGTAAAATAATGAAGAAAATGGCAGCAGAGGCCAGTGCAAGAACAGATGACTTCAGTAACAGCAATCTTGAAGATGATGGCAGTGCTCCAACAAATGTTGCAGTGCCTATGCCCGACATGGTATTGCCCTCATCGTTTGATTCTGACCATCCTAGCCATCGCTATCGTTTCGTGGACACACCAAGTGAATGGCTTGTCAGGCCAGTGCTGGAGACCCAGGGATGGGATCATGATGTTGGTTATGAAGGTCTAAATGTTGAAAGGTTGTTTGCTGTGAAAGGTAAAGTTCCTTTATCAGTGTCTGGTCAACTTTCAAAAGACAAGAAGGATTGCTCCCTCCAAATGGAGGTCGCAAGTTCACTTAAGCACGGTGAGGGGAAAACCACTTCACTGGGGCTTGATTTGCAGTCTGTTGGCAAGGACATGGCATACACTCTTCGTGGCGAGTCGAGGTTTAAAAACTTCAGGCGCAATAACACGGCTGCTGGGATATCCGCCACACTCCTTGGAGATTCTGTATCCGCTGGTGTGAAGGTTGAAGACAAGCTTGTTGTGAACAAGCAGCTCAGGGTTCTGGTTAGTGGAGGCGCTATGAGCGGGAGGGGAGATGTGGCTTACGGAGGGCGGCTTGAAGCAACATTGAAAGACAAAGATTACCCAATTGGCCGCATGCTTTCTACCATAGCGCTCTCTGTTGTTGATTGGCATGGGGATCTTGCTGTTGGCTGCAACATCCAGTCTCAGATTCCTGCTGGAAGAGCTAGCAATTTGATTGGTCATGCGAATCTAAGCAACAAGGGAACTGGTCAAGTTGGCATTCGCCTCAACAGCTCGGAGCATCTTGAGATCGCCCTTATTGCCCTCGTGCCAATATACCAAAACATCAAGAAGTTATTG CAGAGTTAATCCGTATCAACCAGTATTTATGTAAGCGAGAAAAGGCAGCAAGATAAATCCATTAGAGTTAATGCAAGCATAAATTAGAACTAGAGTTAATGCAAGCATAAATTAGAACTATCTATTTATTTTCTTCTTCCCTTACCTACACGTAATAGTGTTTTCTTCCAAGTTTTTTTT TTTTTGATGAAGTTGGATTTGCAGAACACATCCTTTTCAGGATTTTTGTTGTTATCCTTGTACTCTCAATAGCTGATAAGAAAAAAAAATGCACTGCTGTTTTGAAGGC T ]
[-] EMBL CA759009 [ TTCCGTATACGCTGGTGTGAAGTTTGAAGACAAGCTTGTTGTGAGCAAGCAGTTCAGGGTTCTGGGTAGTGGAGGCCCTATGACCGGGAGGGGAGATGTGGCTTACGCAGGGCGGCTTGAAGCAACATTGGAAGACAAAGATTCCCCAATTGGCCGCATGCTTTCTACCATAGCGCTCTCTGTTGTTGATCGGCATGGGGATCTTGCTGTTGGCTGCAACATCCAGTCTCAGATTCCTGCTGGAAGAACTAGCAATTTGATTGGTCATGCGAATCTAAGCAACAAGGGAACTGGTCAAGTTGGCATTCGCCTCAACAGCTCGGAGCATCTTGAGATCGCCCTTATTGCCCTCGTGCCAATATACCAAAACATCAAGAAGTTATTG CAGAGTTAATCCGTATCAACCAGTATTTATGTAAGCGAGAAAAGGCAGCAAGATAAATCCATTAGAGTTAATGCAAGCATAAATTAGAACTAGAGTTAATGCAAGCATAAATTAGAACTATCTATTTATTTTCTTCTTCCCTTACCTACACGTAATAGTGTTTTCTTCCAAGTTTTTTTTTCTTTTTGATGAAGTTGGATTTGCAGAACACATCCTTTTCAGGATTTTTGTTGTTATCCTTGTACTCTCAATAGCTGATAAGAAAAAAAAATGCACTGCTGTTTTGAAGGC TGCAAAAAA ]
[+] EMBL CA999420 [ GGGCGGCTTGAAGCAACATTGAAAGACAAAGATTACCCAATTGGCCGCATGCTTTCTACCATAGCGCTCTCTGTTGTTGATTGGCATGGGGATCTTGCTGTTGGCTGCAACATCCAGTCTCAGATTCCTGCTGGAAGAGCTAGCAATTTGATTGGTCATGCGAATCTAAGCAACAAGGGAACTGGTC ]
[-] EMBL AU181096 [ TTGCTGTTGGCTGCAACATCCAGTCTCAGATTCCTGCTGGAAGAGCTAGCAATTTGATTGGTCATGCGAATCTAAGCAACAAGGGAACTGGTCAAGTT GCATTCGCCTCAACAGCTCGGAGCATCTTGAGANCGCCCTTATTGCCCTCGTGCCAATATACCAAAACATCAAGAAGTTATTG CAGAGTTAATCCGTATCAACCAGTATTTATGTAAGCGAGNAAAGGCAGCAAGATAAATCCATTAGAGTTAATGCAAGCATAAATTAGAACTAGAGTTAATGCAAGCATAAATTAGAACTATCTAaaaaa ]
[+] EMBL C98152 [ TGAGANCGCCCTTATTGCCCTCGTGCCAATATNCCAAAACATCAAGAAGTTATTGCCAGAGTTAATCCGTATCAACCAGTATTTATGTAAGCGAGAAAAGGCAGCAAGATAAATCCATTAGAGTTAATGCAAGCATAAATTAGAACTAGAGTTAATGCAAGCATAAATTAGNNCTATCTATTTATTTTCTTNTTCCCTTACCTACACGTAATAGTGTTTTCTTCCAAGTTTTTTTT TTTTTGATGAAGTTGGATTTGNAGAACACATCCTTTTNAGGATTTTTGTTGTTATCCTTGTACTCTCAATAGCTGATAAGAAAAAAAAATGCACTGCTGTTTTGAAGGC TGCAAAAAAAAAAAAAAA ]
[+] EMBL OSC08092A [ GAGATCGCCCTTATTGCCCTCGTGCCAATATACCAAAACATCAAGAAGTTATTG CAGAGTTAATCCGTATCAACCAGTATTTATGTAAGCGAGAAAAGGCAGCAAGATAAATCCATTAGAGTTAATGCAAGCATAAATTAGAACTAGAGTTAATGCAAGCATAAATTAGAACTATCTATTTATTTTCTTCTTCCCTTACCTACACGTAATAGTGTTTTCTTCCAAGTTTTTTTT TTTTTGANGAAGTTGGNTTTGCAGAACACAACCTTTTCAGGATTTTNGTNGTTATCCTTGGACNCTCAATAGCTGATAAGAAAAAAAAATGCACNGCNGTTTTGAAGGCTTGCAAAAAAAANAAAANAAANAANAAANGGGGGGGCCCCN]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||