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Oryza sativa
cluster # 9667 cluster # 9667       Sequences # 6       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9667#0 length = 1676 sequences # 5  
consensus_9667#1 length = 946 sequences # 1  

consensusID : consensus_9667#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1676
fasta sequence
                              [CTCCGCTCTTCTTGACAAGGAAGCAAAAGCCGCCGCCGCCGACGCCGACGAGAGAGGAGAGAGAGATCGCCGCCGACGTCGCAGGAGGGGGAGGGGGAGATGGCGGCGGAGGGGGAGGACGCGGCGGCCGCGCGACGCCGCGCGGCGGCCACCGACTACAGGAAGAAGCTCCTCACCTGCAGGGAGCTCGAGGCGCGCGCCCGCACGGCAAGGGACAACCTGAAAAATGCAAAGAAAGATTTTGGGAAAACCGAGGATGACTTGAAGTCATTGCAAAGTGTAGGCCAAATAATTGGTGAAGTACTTCGACCATTGGATAGTGAACGATTCATCGTCAAAGCCAGCAGTGGGCCCCGCTATGTTGTTGGCTGCCGAAGTAAAGTTGACAAAGAAAAGTTGATTGCTGGAACGAGGGTTGTTCTTGACATGACAACCCTTACCATCATGCGCACACTGCCACGAGAGGTTGATCCAGTGGTATATAACATGCTACATGAAGACCCTGGCAACGTCAGTTACTCAGCTGTGGGTGGATTGTCGGATCAAATAAGGGAACTTAGGGAGTCCATTGAACTTCCCCTGATGAATCCAAAATTGTTTCTTCGTGTAGGGATTAAACCGCCAAAGGGTGTTCTGCTCTATGGTCCACCTGGAACTGGGAAGACACTACTTGCTAGAGCTATTGCCAGTAACATTGATGCAAACTTTTTAAAGATTGTGTCAAGTGCTATCATTGACAAGTACATAGGTGAAAGTGCACGTCTCATAAGAGAGATGTTTTCCTATGCACGGGAGCATCAACCATGCATCATTTTCATGGATGAAATTGATGCCATCGGTGGCCGAAGGTTCAGTGAAGGAACCAGTGCTGACCGGGAAATTCAGAGAACACTAATGGAGCTCTTAAACCAGTTAGATGGATTTGATGAGCTTGGAAAGGTAAAAATGATCATGGCGACTAATCGTCCTGATGTTTTGGACCCTGCACTCCTTCGTCCTGGGCGGTTGGACAGGAAGATTGAAATTCCACTGCCAAATGAGCAGTCGAGGATGGAAGTCCTCAAAATTCACGCAGCTGGTATTGCTAAACATGGTGAAATCGATTATGAAGCTGTCGTGAAGCTAGCTGAAGGCTTCAATGGTGCCGATCTGCGC-AATGTCTGCAC-TGAGGCTGGCATGGCTGCTATTCGAGCAGAGCGC-GACTATGTCATTC-ATGAAGATTTCATGAAGGCGGTGCGCAAGCTGAACGACGCCAAGAAGCTCGAGTCTAGTGCGCACTACAGCGCGGACTTTGGCAAGGAATGAGGCTGATTTGGTGATGTGCTGACTTCTTTTTTTTTCTCCATGGGGGAGGAACTGTCATGCTGATCCTACTCCTCACTTGCAAAAATCCTGCGATGATGATGATATACACGCCAAATTGAATTAGAAACTGATCCCTCTGAGGTCAACCTGACAAGGAGTTGTGATCCTGTCTTCTATTTATTGTACTTCTTGTAACTTTGGGCATACTCCTATATGGGATGATTAATTCGATTTCATTTATTCCCACAAGCGGCTCTGTTCTTCACGAATGATTGGACAGATTATGGACGATTGCTTATCATAAACCTACAAATAGGTTAAAACAAAGTTCTAAGCAATATTGATGTTGAATTTATTTTCAAGAAAGTTAA]

[+] EMBL AK063158             [CTCCGCTCTTCTTGACAAGGAAGCAAAAGCCGCCGCCGCCGACGCCGACGAGAGAGGAGAGAGAGATCGCCGCCGACGTCGCAGGAGGGGGAGGGGGAGATGGCGGCGGAGGGGGAGGACGCGGCGGCCGCGCGACGCCGCGCGGCGGCCACCGACTACAGGAAGAAGCTCCTCACCTGCAGGGAGCTCGAGGCGCGCGCCCGCACGGCAAGGGACAACCTGAAAAATGCAAAGAAAGATTTTGGGAAAACCGAGGATGACTTGAAGTCATTGCAAAGTGTAGGCCAAATAATTGGTGAAGTACTTCGACCATTGGATAGTGAACGATTCATCGTCAAAGCCAGCAGTGGGCCCCGCTATGTTGTTGGCTGCCGAAGTAAAGTTGACAAAGAAAAGTTGATTGCTGGAACGAGGGTTGTTCTTGACATGACAACCCTTACCATCATGCGCACACTGCCACGAGAGGTTGATCCAGTGGTATATAACATGCTACATGAAGACCCTGGCAACGTCAGTTACTCAGCTGTGGGTGGATTGTCGGATCAAATAAGGGAACTTAGGGAGTCCATTGAACTTCCCCTGATGAATCCAAAATTGTTTCTTCGTGTAGGGATTAAACCGCCAAAGGGTGTTCTGCTCTATGGTCCACCTGGAACTGGGAAGACACTACTTGCTAGAGCTATTGCCAGTAACATTGATGCAAACTTTTTAAAGATTGTGTCAAGTGCTATCATTGACAAGTACATAGGTGAAAGTGCACGTCTCATAAGAGAGATGTTTTCCTATGCACGGGAGCATCAACCATGCATCATTTTCATGGATGAAATTGATGCCATCGGTGGCCGAAGGTTCAGTGAAGGAACCAGTGCTGACCGGGAAATTCAGAGAACACTAATGGAGCTCTTAAACCAGTTAGATGGATTTGATGAGCTTGGAAAGGTAAAAATGATCATGGCGACTAATCGTCCTGATGTTTTGGACCCTGCACTCCTTCGTCCTGGGCGGTTGGACAGGAAGATTGAAATTCCACTGCCAAATGAGCAGTCGAGGATGGAAGTCCTCAAAATTCACGCAGCTGGTATTGCTAAACATGGTGAAATCGATTATGAAGCTGTCGTGAAGCTAGCTGAAGGCTTCAATGGTGCCGATCTGCGC AATGTCTGCAC TGAGGCTGGCATGGCTGCTATTCGAGCAGAGCGC GACTATGTCATTC ATGAAGATTTCATGAAGGCGGTGCGCAAGCTGAACGACGCCAAGAAGCTCGAGTCTAGTGCGCACTACAGCGCGGACTTTGGCAAGGAATGAGGCTGATTTGGTGATGTGCTGACTTCTTTTTTTTTCTCCATGGGGGAGGAACTGTCATGCTGATCCTACTCCTCACTTGCAAAAATCCTGCGATGATGATGATATACACGCCAAATTGAATTAGAAACTGATCCCTCTGAGGTCAACCTGACAAGGAGTTGTGATCCTGTCTTCTATTTATTGTACTTCTTGTAACTTTGGGCATACTCCTATATGGGATGATTAATTCGATTTCATTTATTCCCACAAGCGGCTCTGTTCTTCACGAATGATTGGACAGATTATGGACGATTGCTTATCATAAACCTACAAATAGGTTAAAACAAAGTTCTAAGCAATATTGATGTTGAATTTATTTTCAAGAAAGTTAA]
[+] EMBL AK066695             [   CGCTCTTCTTGACAAGGAAGCAAAAGCCGCCGCCGCCGACGCCGACGAGAGAGGAGAGAGAGATCGCCGCCGACGTCGCAGGAGGGGGAGGGGGAGATGGCGGCGGAGGGGGAGGACGCGGCGGCCGCGCGACGCCGCGCGGCGGCCACCGACTACAGGAAGAAGCTCCTCACCTGCAGGGAGCTCGAGGCGCGCGCCCGCACGGCAAGGGACAACCTGAAAAATGCAAAGAAAGATTTTGGGAAAACCGAGGATGACTTGAAGTCATTGCAAAGTGTAGGCCAAATAATTGGTGAAGTACTTCGACCATTGGATAGTGAACGATTCATCGTCAAAGCCAGCAGTGGGCCCCGCTATGTTGTTGGCTGCCGAAGTAAAGTTGACAAAGAAAAGTTGATTGCTGGAACGAGGGTTGTTCTTGACATGACAACCCTTACCATCATGCGCACACTGCCACGAGAGGTTGATCCAGTGGTATATAACATGCTACATGAAGACCCTGGCAACGTCAGTTACTCAGCTGTGGGTGGATTGTCGGATCAAATAAGGGAACTTAGGGAGTCCATTGAACTTCCCCTGATGAATCCAAAATTGTTTCTTCGTGTAGGGATTAAACCGCCAAAGGGTGTTCTGCTCTATGGTCCACCTGGAACTGGGAAGACACTACTTGCTAGAGCTATTGCCAGTAACATTGATGCAAACTTTTTAAAGATTGTGTCAAGTGCTATCATTGACAAGTACATAGGTGAAAGTGCACGTCTCATAAGAGAGATGTTTTCCTATGCACGGGAGCATCAACCATGCATCATTTTCATGGATGAAATTGATGCCATCGGTGGCCGAAGGTTCAGTGAAGGAACCAGTGCTGACCGGGAAATTCAGAGAACACTAATGGAGCTCTTAAACCAGTTAGATGGATTTGATGAGCTTGGAAAGGTAAAAATGATCATGGCGACTAATCGTCCTGATGTTTTGGACCCTGCACTCCTTCGTCCTGGGCGGTTGGACAGGAAGATTGAAATTCCACTGCCAAATGAGCAGTCGAGGATGGAAGTCCTCAAAATTCACGCAGCTGGTATTGCTAAACATGGTGAAATCGATTATGAAGCTGTCGTGAAGCTAGCTGAAGGCTTCAATGGTGCCGATCTGCGC AATGTCTGCAC TGAGGCTGGCATGGCTGCTATTCGAGCAGAGCGC GACTATGTCATTC ATGAAGATTTCATGAAGGCGGTGCGCAAGCTGAACGACGCCAAGAAGCTCGAGTCTAGTGCGCACTACAGCGCGGACTTTGGCAAGGAATGAGGCTGATTTGGTGATGTGCTGACTTCTTTTTTTTTCTCCATGGGGGAGGAACTGTCATGCTGATCCTACTCCTCACTTGCAAAAATCCTGCGATGATGATGATATACACGCCAAATTGAATTAGAAACTGATCCCTCTGAGGTCAACCTGACAAGGAGTTGTGATCCTGTCTTCTATTTATTGTACTTCTTGTAACTTTGGGCATACTCCTATATGGGATGATTAATTCGATTTC                                                                                                                                        ]
[+] EMBL AB070254             [                                                                                                                                                                                   CAGGGAGCTCGAGGCGCGCGCCCGCACGGCAAGGGACAACCTGAAAAATGCAAAGAAAGATTTTGGGAAAACCGAGGATGACTTGAAGTCATTGCAAAGTGTAGGCCAAATAATTGGTGAAGTACTTCGACCATTGGATAGTGAACGATTCATCGTCAAAGCCAGCAGTGGGCCCCGCTATGTTGTTGGCTGCCGAAGTAAAGTTGACAAAGAAAAGTTGATTGCTGGAACGAGGGTTGTTCTTGACATGACAACCCTTACCATCATGCGCACACTGCCACGAGAGGTTGATCCAGTGGTATATAACATGCTACATGAAGACCCTGGCAACGTCAGTTACTCAGCTGTGGGTGGATTGTCGGATCAAATAAGGGAACTTAGGGAGTCCATTGAACTTCCCCTGATGAATCCAAAATTGTTTCTTCGTGTAGGGATTAAACCGCCAAAGGGTGTTCTGCTCTATGGTCCACCTGGAACTGGGAAGACACTACTTGCTAGAGCTATTGCCAGTAACATTGATGCAAACTTTTTAAAGATTGTGTCAAGTGCTATCATTGACAAGTACATAGGTGAAAGTGCACGTCTCATAAGAGAGATGTTTTCCTATGCACGGGAGCATCAACCATGCATCATTTTCATGGATGAAATTGATGCCATCGGTGGCCGAAGGTTCAGTGAAGGAACCAGTGCTGACCGGGAAATTCAGAGAACACTAATGGAGCTCTTAAACCAGTTAGATGGATTTGATGAGCTTGGAAAGGTAAAAATGATCATGGCGACTAATCGTCCTGATGTTTTGGACCCTGCACTCCTTCGTCCTGGGCGGTTGGACAGGAAGATTGAAATTCCACTGCCAAATGAGCAGTCGAGGATGGAAGTCCTCAAAATTCACGCAGCTGGTATTGCTAAACATGGTGAAATCGATTATGAAGCTGTCGTGAAGCTAGCTGAAGGCTTCAATGGTGCCGATCTGCGC AATGTCTGCAC TGAGGCTGGCATGGCTGCTATTCGAGCAGAGCGC GACTATGTCATTC ATGAAGATTTCATGAAGGCGGTGCGCAAGCTGAACGACGCCAAGAAGCTCGAGTCTAGTGCGCACTACAGCGCGGACTTTGGCAAGGAATGAGGCTGATTTGGTGATGTGCTGACTTCTTTTTTTTTCTCCATGGGGGAGGAACTGTCATGCTGATCCTACTCCTCACTTGCAAAAATCCTGCGATGATGATGATATACACGCCAAATTGAATTAGAAACTGATCCCTCTGAGGTCAACCTGACAAGGAGTTGTGATCCTGTCTTCTATTTATTGTACTTCTTGTAACTTTGGGCATACTCCTATATGGGATGATTAATTCGATTTCATTTATTCCC                                                                                                                              ]
[-] EMBL AU184620             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GCTAGCTGAAGGCTTCAATGGTGCCGATCTGCGCAAATGTCTGCACTTNAGGCTGGCATGGNTGCTATTCGAGCAGAGCGCGGACTATGTCATTCAATNAAGATTTCATGAAGNCGGTGCGCAAGCTGAACGCCNCCAAGAAGCTCGAGTATAGTGCGCANTACAGCGCGGACTTTGGCAAGGAATGAGGNTGATTTGGTGATGTGCTGACTTCTTTTTTTTTCTCCATGGGGGAGGAACTGTCATGCTGATCCTACTCCTCACTTGCAAAAATCCTGCGATGATGATGATATACACGCCAAATTGAATTAGAAACTGATCCCTCTGAGGTCAACCTGACAAGGAGTTGTGATCCTGTCTTCTATTTATTGTACTTCTTGTAACTTTGGGCATACTCCTATATGGGATGATTAATTCGATTTCATTTATTCCCA                                                                                                                             ]
[-] EMBL OSR26951A            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    GCTGGCATGGCTGCTATTCGAGCAGAGCGC GACTATGTCATTC ATGAAGATTTCATGAAGNCGGTGCGCAAGCTGAACGACGCCAAGAAGCTCGAGTCTAGTGCGCACTACAGCGCGGACTTTGGCAAGGAATGAGGCTGATTTGGTGATGTGCTGACTTCTTTTTTTTTCTCCATGGGGGAGGAACTGTCATGCTGATCCTACTCCTTACTTGCAAAAATCCTGCGATGATGATGATATACACGCCAAATTGAATTAGAAACTGATCCCTCTGAGGTCAACCTGACAAGGAGTTGTGATCCTGTCTTCTATTTATTGTACTTCTTGTAACTTTGGGCATACTCCTATATGGGATGATTAATTCGATTTCATTTATTCCCA                                                                                                                             ]


>consensus_9667#0 CTCCGCTCTTCTTGACAAGGAAGCAAAAGCCGCCGCCGCCGACGCCGACGAGAGAGGAGA GAGAGATCGCCGCCGACGTCGCAGGAGGGGGAGGGGGAGATGGCGGCGGAGGGGGAGGAC GCGGCGGCCGCGCGACGCCGCGCGGCGGCCACCGACTACAGGAAGAAGCTCCTCACCTGC AGGGAGCTCGAGGCGCGCGCCCGCACGGCAAGGGACAACCTGAAAAATGCAAAGAAAGAT TTTGGGAAAACCGAGGATGACTTGAAGTCATTGCAAAGTGTAGGCCAAATAATTGGTGAA GTACTTCGACCATTGGATAGTGAACGATTCATCGTCAAAGCCAGCAGTGGGCCCCGCTAT GTTGTTGGCTGCCGAAGTAAAGTTGACAAAGAAAAGTTGATTGCTGGAACGAGGGTTGTT CTTGACATGACAACCCTTACCATCATGCGCACACTGCCACGAGAGGTTGATCCAGTGGTA TATAACATGCTACATGAAGACCCTGGCAACGTCAGTTACTCAGCTGTGGGTGGATTGTCG GATCAAATAAGGGAACTTAGGGAGTCCATTGAACTTCCCCTGATGAATCCAAAATTGTTT CTTCGTGTAGGGATTAAACCGCCAAAGGGTGTTCTGCTCTATGGTCCACCTGGAACTGGG AAGACACTACTTGCTAGAGCTATTGCCAGTAACATTGATGCAAACTTTTTAAAGATTGTG TCAAGTGCTATCATTGACAAGTACATAGGTGAAAGTGCACGTCTCATAAGAGAGATGTTT TCCTATGCACGGGAGCATCAACCATGCATCATTTTCATGGATGAAATTGATGCCATCGGT GGCCGAAGGTTCAGTGAAGGAACCAGTGCTGACCGGGAAATTCAGAGAACACTAATGGAG CTCTTAAACCAGTTAGATGGATTTGATGAGCTTGGAAAGGTAAAAATGATCATGGCGACT AATCGTCCTGATGTTTTGGACCCTGCACTCCTTCGTCCTGGGCGGTTGGACAGGAAGATT GAAATTCCACTGCCAAATGAGCAGTCGAGGATGGAAGTCCTCAAAATTCACGCAGCTGGT ATTGCTAAACATGGTGAAATCGATTATGAAGCTGTCGTGAAGCTAGCTGAAGGCTTCAAT GGTGCCGATCTGCGCAATGTCTGCACTGAGGCTGGCATGGCTGCTATTCGAGCAGAGCGC GACTATGTCATTCATGAAGATTTCATGAAGGCGGTGCGCAAGCTGAACGACGCCAAGAAG CTCGAGTCTAGTGCGCACTACAGCGCGGACTTTGGCAAGGAATGAGGCTGATTTGGTGAT GTGCTGACTTCTTTTTTTTTCTCCATGGGGGAGGAACTGTCATGCTGATCCTACTCCTCA CTTGCAAAAATCCTGCGATGATGATGATATACACGCCAAATTGAATTAGAAACTGATCCC TCTGAGGTCAACCTGACAAGGAGTTGTGATCCTGTCTTCTATTTATTGTACTTCTTGTAA CTTTGGGCATACTCCTATATGGGATGATTAATTCGATTTCATTTATTCCCACAAGCGGCT CTGTTCTTCACGAATGATTGGACAGATTATGGACGATTGCTTATCATAAACCTACAAATA GGTTAAAACAAAGTTCTAAGCAATATTGATGTTGAATTTATTTTCAAGAAAGTTAA



consensusID : consensus_9667#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 946
fasta sequence
                              [GTTAGATGGATTTGATGAGCTTGGAAAGGTAAAAATGATCATGGCGACTAATCGTCCTGATGTTTTGGACCCTGCCCTCCTTCGTCCTGGGCGGTTGGACAGGAAGATTGAAATTCCACTGCCAAATGAGCAGTCGAGGATGGAAGTCCTCAAAATTCACGCAGCTGGTATTGCTAAACATGGTGAAATCGATTATGAAGCTGTCGTGAAGCTAGCTGAAGGCTTCAATGGTGCCGATCTGCGCAATGTCTGCACTGAGGCTGGCATGGCTGCTATTCGAGCAGAGCGCGACTATGTCATTCATGAAGATTTCATGAAGGCGGTGCGCAAGCTGAACGACGCCAAGAAGCTCGAGTCTAGTGCGCACTACAGCGCGGACTTTGGCAAGGAATGAGGCTGATTTGGTGATGTGCTGACTTCTTTTTTTTTCTCCATGGGGGAGGAACTGTCATGCTGATCCTACTCCTCACTTGCAAAAATCCTGCGATGATGATGATATACACGCCAAATTGAATTAGAAACTGATCCCTCTGAGGTCAACCTGACAAGGAGTTGNGATCCTGTCTTGTTCTATTTATTGGACTTCTTGGTAACTTGGGCATACTCCTATATGGGATGAATAATTCGATTTCATTTATTCCCAAAAAAAAAAATAAANATTTATTCAAATAAATTTAATTCTANATTTTTTTATAAAATATAACAATTTCCCTCTNTTTNTTANCCAACCTCGGGGTGGGGCCGGGCCCCAATTTCCCCTTTAGGGGGGGATTACCCGGCCCACTGGCCTGGTGTTAAAAAGGTGGGGGGGGAAAACCTGGGGTCCCCAATTTATACCTTTGAAAATATCCCTTTTTCCGGGTGGGTTATAACGAAAGAGCCCCCAAATCCCTTTCACAATTTTAAACCTTAAGGGAATGTGAACCCCCTTTACGGGCTTTTAACC]

[+] EMBL BE040157             [GTTAGATGGATTTGATGAGCTTGGAAAGGTAAAAATGATCATGGCGACTAATCGTCCTGATGTTTTGGACCCTGCCCTCCTTCGTCCTGGGCGGTTGGACAGGAAGATTGAAATTCCACTGCCAAATGAGCAGTCGAGGATGGAAGTCCTCAAAATTCACGCAGCTGGTATTGCTAAACATGGTGAAATCGATTATGAAGCTGTCGTGAAGCTAGCTGAAGGCTTCAATGGTGCCGATCTGCGCAATGTCTGCACTGAGGCTGGCATGGCTGCTATTCGAGCAGAGCGCGACTATGTCATTCATGAAGATTTCATGAAGGCGGTGCGCAAGCTGAACGACGCCAAGAAGCTCGAGTCTAGTGCGCACTACAGCGCGGACTTTGGCAAGGAATGAGGCTGATTTGGTGATGTGCTGACTTCTTTTTTTTTCTCCATGGGGGAGGAACTGTCATGCTGATCCTACTCCTCACTTGCAAAAATCCTGCGATGATGATGATATACACGCCAAATTGAATTAGAAACTGATCCCTCTGAGGTCAACCTGACAAGGAGTTGNGATCCTGTCTTGTTCTATTTATTGGACTTCTTGGTAACTTGGGCATACTCCTATATGGGATGAATAATTCGATTTCATTTATTCCCAAAAAAAAAAATAAANATTTATTCAAATAAATTTAATTCTANATTTTTTTATAAAATATAACAATTTCCCTCTNTTTNTTANCCAACCTCGGGGTGGGGCCGGGCCCCAATTTCCCCTTTAGGGGGGGATTACCCGGCCCACTGGCCTGGTGTTAAAAAGGTGGGGGGGGAAAACCTGGGGTCCCCAATTTATACCTTTGAAAATATCCCTTTTTCCGGGTGGGTTATAACGAAAGAGCCCCCAAATCCCTTTCACAATTTTAAACCTTAAGGGAATGTGAACCCCCTTTACGGGCTTTTAACC]


>consensus_9667#1 GTTAGATGGATTTGATGAGCTTGGAAAGGTAAAAATGATCATGGCGACTAATCGTCCTGA TGTTTTGGACCCTGCCCTCCTTCGTCCTGGGCGGTTGGACAGGAAGATTGAAATTCCACT GCCAAATGAGCAGTCGAGGATGGAAGTCCTCAAAATTCACGCAGCTGGTATTGCTAAACA TGGTGAAATCGATTATGAAGCTGTCGTGAAGCTAGCTGAAGGCTTCAATGGTGCCGATCT GCGCAATGTCTGCACTGAGGCTGGCATGGCTGCTATTCGAGCAGAGCGCGACTATGTCAT TCATGAAGATTTCATGAAGGCGGTGCGCAAGCTGAACGACGCCAAGAAGCTCGAGTCTAG TGCGCACTACAGCGCGGACTTTGGCAAGGAATGAGGCTGATTTGGTGATGTGCTGACTTC TTTTTTTTTCTCCATGGGGGAGGAACTGTCATGCTGATCCTACTCCTCACTTGCAAAAAT CCTGCGATGATGATGATATACACGCCAAATTGAATTAGAAACTGATCCCTCTGAGGTCAA CCTGACAAGGAGTTGNGATCCTGTCTTGTTCTATTTATTGGACTTCTTGGTAACTTGGGC ATACTCCTATATGGGATGAATAATTCGATTTCATTTATTCCCAAAAAAAAAAATAAANAT TTATTCAAATAAATTTAATTCTANATTTTTTTATAAAATATAACAATTTCCCTCTNTTTN TTANCCAACCTCGGGGTGGGGCCGGGCCCCAATTTCCCCTTTAGGGGGGGATTACCCGGC CCACTGGCCTGGTGTTAAAAAGGTGGGGGGGGAAAACCTGGGGTCCCCAATTTATACCTT TGAAAATATCCCTTTTTCCGGGTGGGTTATAACGAAAGAGCCCCCAAATCCCTTTCACAA TTTTAAACCTTAAGGGAATGTGAACCCCCTTTACGGGCTTTTAACC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9667#0      CTCCGCTCTTCTTGACAAGGAAGCAAAAGCCGCCGCCGCCGACGCCGACGAGAGAGGAGA 60
consensus_9667#1      ------------------------------------------------------------
                                                                                  

consensus_9667#0      GAGAGATCGCCGCCGACGTCGCAGGAGGGGGAGGGGGAGATGGCGGCGGAGGGGGAGGAC 120
consensus_9667#1      ------------------------------------------------------------
                                                                                  

consensus_9667#0      GCGGCGGCCGCGCGACGCCGCGCGGCGGCCACCGACTACAGGAAGAAGCTCCTCACCTGC 180
consensus_9667#1      ------------------------------------------------------------
                                                                                  

consensus_9667#0      AGGGAGCTCGAGGCGCGCGCCCGCACGGCAAGGGACAACCTGAAAAATGCAAAGAAAGAT 240
consensus_9667#1      ------------------------------------------------------------
                                                                                  

consensus_9667#0      TTTGGGAAAACCGAGGATGACTTGAAGTCATTGCAAAGTGTAGGCCAAATAATTGGTGAA 300
consensus_9667#1      ------------------------------------------------------------
                                                                                  

consensus_9667#0      GTACTTCGACCATTGGATAGTGAACGATTCATCGTCAAAGCCAGCAGTGGGCCCCGCTAT 360
consensus_9667#1      ------------------------------------------------------------
                                                                                  

consensus_9667#0      GTTGTTGGCTGCCGAAGTAAAGTTGACAAAGAAAAGTTGATTGCTGGAACGAGGGTTGTT 420
consensus_9667#1      ------------------------------------------------------------
                                                                                  

consensus_9667#0      CTTGACATGACAACCCTTACCATCATGCGCACACTGCCACGAGAGGTTGATCCAGTGGTA 480
consensus_9667#1      ------------------------------------------------------------
                                                                                  

consensus_9667#0      TATAACATGCTACATGAAGACCCTGGCAACGTCAGTTACTCAGCTGTGGGTGGATTGTCG 540
consensus_9667#1      ------------------------------------------------------------
                                                                                  

consensus_9667#0      GATCAAATAAGGGAACTTAGGGAGTCCATTGAACTTCCCCTGATGAATCCAAAATTGTTT 600
consensus_9667#1      ------------------------------------------------------------
                                                                                  

consensus_9667#0      CTTCGTGTAGGGATTAAACCGCCAAAGGGTGTTCTGCTCTATGGTCCACCTGGAACTGGG 660
consensus_9667#1      ------------------------------------------------------------
                                                                                  

consensus_9667#0      AAGACACTACTTGCTAGAGCTATTGCCAGTAACATTGATGCAAACTTTTTAAAGATTGTG 720
consensus_9667#1      ------------------------------------------------------------
                                                                                  

consensus_9667#0      TCAAGTGCTATCATTGACAAGTACATAGGTGAAAGTGCACGTCTCATAAGAGAGATGTTT 780
consensus_9667#1      ------------------------------------------------------------
                                                                                  

consensus_9667#0      TCCTATGCACGGGAGCATCAACCATGCATCATTTTCATGGATGAAATTGATGCCATCGGT 840
consensus_9667#1      ------------------------------------------------------------
                                                                                  

consensus_9667#0      GGCCGAAGGTTCAGTGAAGGAACCAGTGCTGACCGGGAAATTCAGAGAACACTAATGGAG 900
consensus_9667#1      ------------------------------------------------------------
                                                                                  

consensus_9667#0      CTCTTAAACCAGTTAGATGGATTTGATGAGCTTGGAAAGGTAAAAATGATCATGGCGACT 960
consensus_9667#1      -----------GTTAGATGGATTTGATGAGCTTGGAAAGGTAAAAATGATCATGGCGACT 49
                                 *************************************************

consensus_9667#0      AATCGTCCTGATGTTTTGGACCCTGCACTCCTTCGTCCTGGGCGGTTGGACAGGAAGATT 1020
consensus_9667#1      AATCGTCCTGATGTTTTGGACCCTGCCCTCCTTCGTCCTGGGCGGTTGGACAGGAAGATT 109
                      ************************** *********************************

consensus_9667#0      GAAATTCCACTGCCAAATGAGCAGTCGAGGATGGAAGTCCTCAAAATTCACGCAGCTGGT 1080
consensus_9667#1      GAAATTCCACTGCCAAATGAGCAGTCGAGGATGGAAGTCCTCAAAATTCACGCAGCTGGT 169
                      ************************************************************

consensus_9667#0      ATTGCTAAACATGGTGAAATCGATTATGAAGCTGTCGTGAAGCTAGCTGAAGGCTTCAAT 1140
consensus_9667#1      ATTGCTAAACATGGTGAAATCGATTATGAAGCTGTCGTGAAGCTAGCTGAAGGCTTCAAT 229
                      ************************************************************

consensus_9667#0      GGTGCCGATCTGCGCAATGTCTGCACTGAGGCTGGCATGGCTGCTATTCGAGCAGAGCGC 1200
consensus_9667#1      GGTGCCGATCTGCGCAATGTCTGCACTGAGGCTGGCATGGCTGCTATTCGAGCAGAGCGC 289
                      ************************************************************

consensus_9667#0      GACTATGTCATTCATGAAGATTTCATGAAGGCGGTGCGCAAGCTGAACGACGCCAAGAAG 1260
consensus_9667#1      GACTATGTCATTCATGAAGATTTCATGAAGGCGGTGCGCAAGCTGAACGACGCCAAGAAG 349
                      ************************************************************

consensus_9667#0      CTCGAGTCTAGTGCGCACTACAGCGCGGACTTTGGCAAGGAATGAGGCTGATTTGGTGAT 1320
consensus_9667#1      CTCGAGTCTAGTGCGCACTACAGCGCGGACTTTGGCAAGGAATGAGGCTGATTTGGTGAT 409
                      ************************************************************

consensus_9667#0      GTGCTGACTTCTTTTTTTTTCTCCATGGGGGAGGAACTGTCATGCTGATCCTACTCCTCA 1380
consensus_9667#1      GTGCTGACTTCTTTTTTTTTCTCCATGGGGGAGGAACTGTCATGCTGATCCTACTCCTCA 469
                      ************************************************************

consensus_9667#0      CTTGCAAAAATCCTGCGATGATGATGATATACACGCCAAATTGAATTAGAAACTGATCCC 1440
consensus_9667#1      CTTGCAAAAATCCTGCGATGATGATGATATACACGCCAAATTGAATTAGAAACTGATCCC 529
                      ************************************************************

consensus_9667#0      TCTGAGGTCAACCTGACAAGGAGTTGTGATCCTGTCTT---CTATTTATTGTACTTCTTG 1497
consensus_9667#1      TCTGAGGTCAACCTGACAAGGAGTTGNGATCCTGTCTTGTTCTATTTATTGGACTTCTTG 589
                      ************************** ***********   ********** ********

consensus_9667#0      TAACTTTGGGCATACTCCTATATGGGATGATTAATTCGATTTCATTTATTCCCACAAGCG 1557
consensus_9667#1      GTAACTTGGGCATACTCCTATATGGGATGAATAATTCGATTTCATTTATTCCCAAAAAAA 649
                        *  ************************* *********************** **   

consensus_9667#0      GCTCTGTTCTTCACGAATGATTGGACAGATTATGGACGATTGCTTATCATA----AACCT 1613
consensus_9667#1      AAAATAAANATTTATTCAAATAAATTTAATTCTANATTTTTTTATAAAATATAACAATTT 709
                          *     *        **       *** *  *   **   **  ***    **  *

consensus_9667#0      ACAAATAGGTTAAAACAAAGTTCTAAGCAATATTGATGTTGAATTTATTTTCAAGAAAGT 1673
consensus_9667#1      CCCTCTNTTTNTTANCCAACCTCGGGGTGGGGCCGGGCCCCAATTTCCCCTTTAGGGGGG 769
                       *   *   *   * * **  **   *       *      *****    *  **   * 

consensus_9667#0      TAA--------------------------------------------------------- 1676
consensus_9667#1      GATTACCCGGCCCACTGGCCTGGTGTTAAAAAGGTGGGGGGGGAAAACCTGGGGTCCCCA 829
                       *                                                          

consensus_9667#0      ------------------------------------------------------------
consensus_9667#1      ATTTATACCTTTGAAAATATCCCTTTTTCCGGGTGGGTTATAACGAAAGAGCCCCCAAAT 889
                                                                                  

consensus_9667#0      ---------------------------------------------------------
consensus_9667#1      CCCTTTCACAATTTTAAACCTTAAGGGAATGTGAACCCCCTTTACGGGCTTTTAACC 946
                                                                               




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)