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Oryza sativa
cluster # 9693 cluster # 9693       Sequences # 6       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9693#0 length = 1522 sequences # 4  
consensus_9693#1 length = 832 sequences # 1  
consensus_9693#2 length = 498 sequences # 1  

consensusID : consensus_9693#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1522
fasta sequence
                              [TATCTCATCCAGAACGCCGGAGACGCGAGCGCTGCGAGCAAGCGCAATGGAGGCGAAGCTGTCGGCGGCGTCGAGGCGGCTGGCGCCGTCGCCCATCCAGCAGCTCTCCCACCTGGCGCAGTGCGCCGGCGCCGTCAACCTCGCCGAGGGCTTCCCCGACTTCCCGGCCCCCGCCCACGTCAAGGCCGCCGCCGCCGCCGCCATCGCCGCCGACCTCAACCAGTACAGGCATGTGCAGGGGATCTGCGACGCCCTCGCGGAGACGATGAAGCGGGACCATGGCCTCCGCGTCGACCCTCTCACCGACTTCGCCGTTTGCTGCGGTCAGTCTGAGGCGTTTGCTGCAGCGATATTTGCAATAATTGACCAGGGGGATGAAGTTTTGCTCTTTGATCCACCTTTTGAAACCTATCAAACGTGCATTGAACTAGCCCGAGGTGTCCCTGTGTATGTGCCGTTGGATCCACCTTCTTGGACTTTGAATGAAGATAAATTTTTGAAATCCTTTACGAACCGGACAAAGGCAGTGGTCTTGAATAGCCCGCACAATCCAGCAGGAAAGGTTTTTAGCAGAGAGGAATTGCTTATCATTGCTCAAGCTTGTCAGAGGATGGACTGCTTTGCAATAACTGATGAGGTTTATGAGTACATTACTTACGATGATAACAAGCATATGTCATTGGCTTCGCTTCCAGGAATGCAAGAAAGGACCATCATTACTTCCTCACTGTCAAAAACTTACAGCGTAACTGGTTGGAGAATTGGATGGGCTTGTGCTCCAGCTAATATCGCCTCAGCAATAAGAAACATCCATGTCAAGCTAACTGATTCAGCCCCTGCACCATTCCAAGAAGCTGCGTTGGTTGCGTTAACAAGCCCACCAGACTTCTATTCATCCTTGAAACAGGACTACACGGCGAGAAGAGACTTCATCCTTCAGGTGCTTACTGATTTTGGCTTCCGCATTAGCTTCAAG-CCACAAGGCTCGATCTTTGTATTTGTTGAGCTTCCAAGGTCATGGCAACTTTCAGATATGGATTTCGTGACGAACTTGATAAAAAATGCTGGTGTGGCGGCCGTGCCTGGTCGGGGATTCTTCCACTCAAGTACCGACGACCCAAGCTACCATCACCGGTATGTCAGGTTTGCGTTTTGCAAGAGCAATGACACCCTAAACGCTGCTGCCGAGAAGATGAGGAAGCTAGCAGTCAGTCATGATGCAAGGTTATTGAGGCCTACTGATGATGGAGAAGCAGGTCAGACTGCATCAGCCACCTCTCCTTGATCACAGCCATAGTATCTGCGTTCCAAATGTTATTTTGCTTTAATTTTTGGGGAACCATCAAGCATTCAAGTTGCAGGGTAGAAGTTTGTTTTAATCAACCGTAGTATAAGTAAACATTTAAGTCAGAAGATGACTGTCCTGGTAAGTGTTTAAGCCCAAATGGGTTGCCTTCATTTTTTATGCAATCCAAACAGTTCTTAAAAATCTGAAAAAAAAATATATATAGCACATAATAAG]

[+] EMBL CB641661             [TATCTCATCCAGAACGCCGGAGACGCGAGCGCTGCGAGCAAGCGCAATGGAGGCGAAGCTGTCGGCGGCGTCGAGGCGGCTGGCGCCGTCGCCCATCCAGCAGCTCTCCCACCTGGCGCAGTGCGCCGGCGCCGTCAACCTCGCCGAGGGCTTCCCCGACTTCCCGGCCCCCGCCCACGTCAAGGCCGCCGCCGCCGCCGCCATCGCCGCCGACCTCAACCAGTACAGGCATGTGCAGGGGATCTGCGACGCCCTCGCGGAGACGATGAAGCGGGACCATGGCCTCCGCGTCGACCCTCTCACCGACTTCGCCGTTTGCTGCGGTCAGTCTGAGGCGTTTGCTGCAGCGATATTTGCAATAATTGACCAGGGGGATGAAGTTTTGCTCTTTGATCCACCTTTTGAAACCTATCAAACGTGCATTGAACTAGCCCGAGGTGTCCCTGTGTATGTGCCGTTGGATCCACCTTCTTGGACTTTGAATGAAGATAAATTTTTGAAATCCTTTACGAACCGGACAAAGGCAGTGGTCTTGAATAGCCCGCACAATCCAGCAGGAAAGGTTTTTAGCAGAGAGGAATTGCTTATCATTGCTCAAGCTTGTCAGAGGATGGACTGCTTTGCAATAACTGATGAGGTTTATGAGTACATTACTTACGATGATAACAAGCATATGTCATTGGCTTCGCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL AK067463             [         CAGAACGCCGGAGACGCGAGCGCTGCGAGCAAGCGCAATGGAGGCGAAGCTGTCGGCGGCGTCGAGGCGGGTGGCGCCGTCGCCCATCCAGCAGCTCTCCCACCTGGCGCAGCGCGCCGGCGCCGTCAACCTCGCCGAGGGCTTCCCCGACTTCCCGGCCCCCGCCCACGTCAAGGCCGCCGCCGCCGCCGCCATCGCCGCCGACCTCAACCAGTACAGGCATGTGCAGGGGATCTGCGACGCCCTCGCGGAGACGATGAAGCGGGACCATGGCCTCCGCGTCGACCCTCTCACCGACTTCGCCGTTTGCTGCGGCCAGTCTGAGGCGTTTGCTGCAGCGATATTTGCAATAATTGACCAAGGGGATGAAGTTTTGCTCTTTGATCCAGCTTTTGAAACCTATCAAACGTGCATTGAACTAGCCCGAGGTGTCCCTGTGTATGTGCCGTTGGATCCACCTTCTTGGACTTTGAATGAAGATAAATTTTTGAAATCATTTACAAACCGGACAAAGGCAGTGGTCTTGAATAGCCCGCACAATCCAACAGGAAAGGTTTTTAGCAGAGAGGAATTGCTTATCATTGCTCAAGCTTGTCAGAAAATGGACTGCTTTGCAATAACTGATGAGGTTTATGAGTACATTACTTACGATGAGAACAAGCATATCTCATTGGCTTCGCTTCCAGGAATGCAAGAAAGGACCATCATTACTTCCTCACTGTCAAAAACTTACAGCGTAACTGGTTGGAGAATTGGATGGGCTTGTGCTCCAGCTAATATCGCCTCAGCAATAAGAAACATCCATGTCAAGCTAACTGATTCAGCCCCTGCACCATTCCAAGAAGCTGCGTTGGTTGCGTTAACAAGCCCACCAGACTTCTATTCATCCTTGAAACAGGACTACACGGCGAGAAGAGACTTCATCCTTCAGGTGCTTACTGATTTTGGCTTCCGCATTAGCTTCAAGCCCACAAGGCTCGATCTTTGTATTTGTTGAGCTTCCAAGGTCATGGCAACTTTCAGATATGGATTTCGTGACGAACTTGATAAAAAATGCTGGTGTGGCGGCCGTGCCTGGTCGGGGATTCTTCCACTCAAGTACCGACGACCCAAGCTACCATCACCGGTATGTCAGGTTTGCGTTTTGCAAGAGCAATGACACCCTAAACGCTGCTGCCGAGAAGATGAGGAAGCTAGCAGTCAGTCATGATGCAAGGTTATTGAGGCCTACTGATGATGGAGAAGCAGGTCAGACTGCATCAGCCACCTCTCCTTGATCACAGCCATAGTATCTGCGTTCCAAATGTTATTTTGCTTTAATTTTTGGGGAACCATCAAGCATTCAAGTTGCAGGGTAGAAGTTTGTTTTAATCAACCGTAGTATAAGTAAACATTTAAGTCAGAAGATGACTGTCCTGGTAAGTGTTTAAGCCCAAATGGGTTGCCTTCATTTTTTATGCAATCCAAACAGTTCTTAAAAATCTGAAAAAAAAATATATATAGCACATAAT   ]
[-] EMBL CB658220             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              AGAAAGGACCATCATTACTTCCTCACTGTCAAAAACTTACAGCGTAACTGGTTGGAGAATTGGATGGGCTTGTGCTCCAGCTAATATCGCCTCAGCAATAAGAAACATCCATGTCAAGCTAACTGATTCAGCCCCTGCACCATTCCAAGAAGCTGCGTTGGTTGCGTTAACAAGCCCACCAGACTTCTATTCATCCTTGAAACAGGACTACACGGCGAGAAGAGACTTCATCCTTCAGGTGCTTACTGATTTTGGCTTCCGCATTAGCTTCAAG CCACAAGGCTCGATCTTTGTATTTGTTGAGCTTCCAAGGTCATGGCAACTTTCAGATATGGATTTCGTGACGAACTTGATAAAAAATGCTGGTGTGGCGGCCGTGCCTGGTCGGGGATTCTTCCACTCAAGTACCGACGACCCAAGCTACCATCACCGGTATGTCAGGTTTGCGTTTTGCAAGAGCAATGACACCCTAAACGCTGCTGCCGAGAAGATGAGGAAGCTAGCAGTCAGTCATGATGCAAGGTTATTGAGGCCTACTGATGATGGAGAAGCAGGTCAGACTGCATCAGCCACCTCTCCTTGATCACAGCCATAGTATCTGCGTTCCAAATGTTATTTTGCTTTAATTTTTGGGGAACCATCAAGCATTCAAGTTGCAGGGTAGAAGTTTGTTTTAATCAACCGTAGTATAAGTAAACATTTAAGTCAGAAGATGACTGTCCTGGTAAGTGTTTAAGCCCAAATGGGTTGCCTTCATTTTTTATGCAATCCAAACAGTTGTTAAAAATTTGAAAAAAAAATATATATA            ]
[-] EMBL CB641662             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           GGATGGGCTTGTGCTCCAGCTAATATCGCCTCAGCAATAAGAAACATCCATGTCAAGCTAACTGATTCAGCCCCTGCACCATTCCAAGAAGCTGCGTTGGTTGCGTTAACAAGCCCACCAGACTTCTATTCATCCTTGAAACAGGACTACACGGCGAGAAGAGACTTCATCCTTCAGGTGCTTACTGATTTTGGCTTCCGCATTAGCTTCAAG CCACAAGGCTCGATCTTTGTATTTGTTGAGCTTCCAAGGTCATGGCAACTTTCAGATATGGATTTCGTGACGAACTTGATAAAAAATGCTGGTGTGGCGGCCGTGCCTGGTCGGGGATTCTTCCACTCAAGTACCGACGACCCAAGCTACCATCACCGGTATGTCAGGTTTGCGTTTTGCAAGAGCAATGACACCCTAAACGCTGCTGCCGAGAAGATGAGGAAGCTAGCAGTCAGTCATGATGCAAGGTTATTGAGGCCTACTGATGATGGAGAAGCAGGTCAGACTGCATCAGCCACCTCTCCTTGATCACAGCCATAGTATCTGCGTTCCAAATGTTATTTTGCTTTAATTTTTGGGGAACCATCAAGCATTCAAGTTGCAGGGTAGAAGTTTGTTTTAATCAACCGTAGTATAAGTAAACATTTAAGTCAGAAGATGACTGTCCTGGTAAGTGTTTAAGCCCAAATGGGTTGCCTTCATTTTTTATGCAATCCAAACAGTTCTT AAAATCTGAAAAAAAAATATATATAGCAAAAAAAAAG]


>consensus_9693#0 TATCTCATCCAGAACGCCGGAGACGCGAGCGCTGCGAGCAAGCGCAATGGAGGCGAAGCT GTCGGCGGCGTCGAGGCGGCTGGCGCCGTCGCCCATCCAGCAGCTCTCCCACCTGGCGCA GTGCGCCGGCGCCGTCAACCTCGCCGAGGGCTTCCCCGACTTCCCGGCCCCCGCCCACGT CAAGGCCGCCGCCGCCGCCGCCATCGCCGCCGACCTCAACCAGTACAGGCATGTGCAGGG GATCTGCGACGCCCTCGCGGAGACGATGAAGCGGGACCATGGCCTCCGCGTCGACCCTCT CACCGACTTCGCCGTTTGCTGCGGTCAGTCTGAGGCGTTTGCTGCAGCGATATTTGCAAT AATTGACCAGGGGGATGAAGTTTTGCTCTTTGATCCACCTTTTGAAACCTATCAAACGTG CATTGAACTAGCCCGAGGTGTCCCTGTGTATGTGCCGTTGGATCCACCTTCTTGGACTTT GAATGAAGATAAATTTTTGAAATCCTTTACGAACCGGACAAAGGCAGTGGTCTTGAATAG CCCGCACAATCCAGCAGGAAAGGTTTTTAGCAGAGAGGAATTGCTTATCATTGCTCAAGC TTGTCAGAGGATGGACTGCTTTGCAATAACTGATGAGGTTTATGAGTACATTACTTACGA TGATAACAAGCATATGTCATTGGCTTCGCTTCCAGGAATGCAAGAAAGGACCATCATTAC TTCCTCACTGTCAAAAACTTACAGCGTAACTGGTTGGAGAATTGGATGGGCTTGTGCTCC AGCTAATATCGCCTCAGCAATAAGAAACATCCATGTCAAGCTAACTGATTCAGCCCCTGC ACCATTCCAAGAAGCTGCGTTGGTTGCGTTAACAAGCCCACCAGACTTCTATTCATCCTT GAAACAGGACTACACGGCGAGAAGAGACTTCATCCTTCAGGTGCTTACTGATTTTGGCTT CCGCATTAGCTTCAAGCCACAAGGCTCGATCTTTGTATTTGTTGAGCTTCCAAGGTCATG GCAACTTTCAGATATGGATTTCGTGACGAACTTGATAAAAAATGCTGGTGTGGCGGCCGT GCCTGGTCGGGGATTCTTCCACTCAAGTACCGACGACCCAAGCTACCATCACCGGTATGT CAGGTTTGCGTTTTGCAAGAGCAATGACACCCTAAACGCTGCTGCCGAGAAGATGAGGAA GCTAGCAGTCAGTCATGATGCAAGGTTATTGAGGCCTACTGATGATGGAGAAGCAGGTCA GACTGCATCAGCCACCTCTCCTTGATCACAGCCATAGTATCTGCGTTCCAAATGTTATTT TGCTTTAATTTTTGGGGAACCATCAAGCATTCAAGTTGCAGGGTAGAAGTTTGTTTTAAT CAACCGTAGTATAAGTAAACATTTAAGTCAGAAGATGACTGTCCTGGTAAGTGTTTAAGC CCAAATGGGTTGCCTTCATTTTTTATGCAATCCAAACAGTTCTTAAAAATCTGAAAAAAA AATATATATAGCACATAATAAG



consensusID : consensus_9693#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 832
fasta sequence
                              [GCGCTGCGAGCAAGCGCAATGGAGGCGAAGCTGTCGGCGGCGTCGAGGCGGGTGGCGCCGTCGCCCATCCAGCAGCTCTCCCACCTGGCGCAGCGCGCCGGCGCCGTCAACCTCGCCGAGGGCTTCCCCGACTTCCCGGCCCCCGCCCACGTCAAGGCCGCCGCCGCCGCCGCCATCGCCGCCGACCTCAACCAGTACAGGCATGTGCAGGGGATCTGCGACGCCCTCGCGGAGACGATGAAGCGGGACCATGGCCTCCGCGTCGACCCTCTCACCGACTTCGCCGTTTGCTGCGGCCAGTCTGAGGCGTTTGCTGCAGCGATATTTGCAATAATTGACCAAGGGGATGAAGTTTTGCTCTTTGATCCAGCTTTTGAAACCTATCAAACGTGCATTGAACTAGCCCGAGGTGTCCCTCCCGCACAATCCAACAGGAAAGGTTTTTAGCAGAGAGGAATTGCTTATCATTGCTCAAGCTTGTCAGAAAATGGACTGCTTTGCAATAACTGATGAGGTTTATGAGTACATTACTTACGATGAGAACAAGCATATCTCATTGGCTTCGCTTCCAGGAATGCAAGAAAGGACCATCATTACTTCCTCACTGTCAAAAACTTACAGCGTAACTGGTTGGAGAATTGGATGGGCTTGTGCTCCAGCTAATATCGCCTCAGCAATAAGAAACATCCATGTCAAGCTAACTGATTCAGCCCCTGCACCATTCCAAGAAGCTGCGTTGGTTGCGTTAACAAGCCCACCAGACTTCTATTCATCCTTGAAACAGGACTACACGGCGAGAAGAGACTTCATCCTTCAGGTGCTTACTGATTTT]

[+] EMBL CB658219             [GCGCTGCGAGCAAGCGCAATGGAGGCGAAGCTGTCGGCGGCGTCGAGGCGGGTGGCGCCGTCGCCCATCCAGCAGCTCTCCCACCTGGCGCAGCGCGCCGGCGCCGTCAACCTCGCCGAGGGCTTCCCCGACTTCCCGGCCCCCGCCCACGTCAAGGCCGCCGCCGCCGCCGCCATCGCCGCCGACCTCAACCAGTACAGGCATGTGCAGGGGATCTGCGACGCCCTCGCGGAGACGATGAAGCGGGACCATGGCCTCCGCGTCGACCCTCTCACCGACTTCGCCGTTTGCTGCGGCCAGTCTGAGGCGTTTGCTGCAGCGATATTTGCAATAATTGACCAAGGGGATGAAGTTTTGCTCTTTGATCCAGCTTTTGAAACCTATCAAACGTGCATTGAACTAGCCCGAGGTGTCCCTCCCGCACAATCCAACAGGAAAGGTTTTTAGCAGAGAGGAATTGCTTATCATTGCTCAAGCTTGTCAGAAAATGGACTGCTTTGCAATAACTGATGAGGTTTATGAGTACATTACTTACGATGAGAACAAGCATATCTCATTGGCTTCGCTTCCAGGAATGCAAGAAAGGACCATCATTACTTCCTCACTGTCAAAAACTTACAGCGTAACTGGTTGGAGAATTGGATGGGCTTGTGCTCCAGCTAATATCGCCTCAGCAATAAGAAACATCCATGTCAAGCTAACTGATTCAGCCCCTGCACCATTCCAAGAAGCTGCGTTGGTTGCGTTAACAAGCCCACCAGACTTCTATTCATCCTTGAAACAGGACTACACGGCGAGAAGAGACTTCATCCTTCAGGTGCTTACTGATTTT]


>consensus_9693#1 GCGCTGCGAGCAAGCGCAATGGAGGCGAAGCTGTCGGCGGCGTCGAGGCGGGTGGCGCCG TCGCCCATCCAGCAGCTCTCCCACCTGGCGCAGCGCGCCGGCGCCGTCAACCTCGCCGAG GGCTTCCCCGACTTCCCGGCCCCCGCCCACGTCAAGGCCGCCGCCGCCGCCGCCATCGCC GCCGACCTCAACCAGTACAGGCATGTGCAGGGGATCTGCGACGCCCTCGCGGAGACGATG AAGCGGGACCATGGCCTCCGCGTCGACCCTCTCACCGACTTCGCCGTTTGCTGCGGCCAG TCTGAGGCGTTTGCTGCAGCGATATTTGCAATAATTGACCAAGGGGATGAAGTTTTGCTC TTTGATCCAGCTTTTGAAACCTATCAAACGTGCATTGAACTAGCCCGAGGTGTCCCTCCC GCACAATCCAACAGGAAAGGTTTTTAGCAGAGAGGAATTGCTTATCATTGCTCAAGCTTG TCAGAAAATGGACTGCTTTGCAATAACTGATGAGGTTTATGAGTACATTACTTACGATGA GAACAAGCATATCTCATTGGCTTCGCTTCCAGGAATGCAAGAAAGGACCATCATTACTTC CTCACTGTCAAAAACTTACAGCGTAACTGGTTGGAGAATTGGATGGGCTTGTGCTCCAGC TAATATCGCCTCAGCAATAAGAAACATCCATGTCAAGCTAACTGATTCAGCCCCTGCACC ATTCCAAGAAGCTGCGTTGGTTGCGTTAACAAGCCCACCAGACTTCTATTCATCCTTGAA ACAGGACTACACGGCGAGAAGAGACTTCATCCTTCAGGTGCTTACTGATTTT



consensusID : consensus_9693#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 498
fasta sequence
                              [CGTGCCGAATTCGGCACGAGGCTTCCAGGAATGCAAGAAAGGACCATCATTACTTCCTCACTGTCAAAAACTTACAGCGTAACTGGTGAGCAGAACTCAAGTTTGCACACTGCAATGCAATCAACTACTTGTGAGACGTTTGGGACATATGAAGATTCTGTTGTCTAAACTGGCTAGGTTGGAGAATTGGATGGGCTTGTGCTCCAGCTAATATCGCCTCAGCAATAAGAAACATCCATGTCAAGCTAACTGATTCAGCCCCTGCACCATTCCAAGAAGCTGCGTTGGTTGCGTTAACAAGCCCACCAGACTTCTATTCATCCTTGAAACAGGACTACACGGCGAGAAGAGACTTCATCCTTCAGGTGCTTACTGATTTTGGCTTCCGCATTAGCTTCAAGCCACAAGGCTCGATCTTTGTATTTGTTGAGCTTCCAAGGTCATGGCAACTTTCAGATATGGATTTCGTGACGAACTTGATAAAAAATGCTGGTGTGG]

[+] EMBL BE230398             [CGTGCCGAATTCGGCACGAGGCTTCCAGGAATGCAAGAAAGGACCATCATTACTTCCTCACTGTCAAAAACTTACAGCGTAACTGGTGAGCAGAACTCAAGTTTGCACACTGCAATGCAATCAACTACTTGTGAGACGTTTGGGACATATGAAGATTCTGTTGTCTAAACTGGCTAGGTTGGAGAATTGGATGGGCTTGTGCTCCAGCTAATATCGCCTCAGCAATAAGAAACATCCATGTCAAGCTAACTGATTCAGCCCCTGCACCATTCCAAGAAGCTGCGTTGGTTGCGTTAACAAGCCCACCAGACTTCTATTCATCCTTGAAACAGGACTACACGGCGAGAAGAGACTTCATCCTTCAGGTGCTTACTGATTTTGGCTTCCGCATTAGCTTCAAGCCACAAGGCTCGATCTTTGTATTTGTTGAGCTTCCAAGGTCATGGCAACTTTCAGATATGGATTTCGTGACGAACTTGATAAAAAATGCTGGTGTGG]


>consensus_9693#2 CGTGCCGAATTCGGCACGAGGCTTCCAGGAATGCAAGAAAGGACCATCATTACTTCCTCA CTGTCAAAAACTTACAGCGTAACTGGTGAGCAGAACTCAAGTTTGCACACTGCAATGCAA TCAACTACTTGTGAGACGTTTGGGACATATGAAGATTCTGTTGTCTAAACTGGCTAGGTT GGAGAATTGGATGGGCTTGTGCTCCAGCTAATATCGCCTCAGCAATAAGAAACATCCATG TCAAGCTAACTGATTCAGCCCCTGCACCATTCCAAGAAGCTGCGTTGGTTGCGTTAACAA GCCCACCAGACTTCTATTCATCCTTGAAACAGGACTACACGGCGAGAAGAGACTTCATCC TTCAGGTGCTTACTGATTTTGGCTTCCGCATTAGCTTCAAGCCACAAGGCTCGATCTTTG TATTTGTTGAGCTTCCAAGGTCATGGCAACTTTCAGATATGGATTTCGTGACGAACTTGA TAAAAAATGCTGGTGTGG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9693#0      TATCTCATCCAGAACGCCGGAGACGCGAGCGCTGCGAGCAAGCGCAATGGAGGCGAAGCT 60
consensus_9693#1      ----------------------------GCGCTGCGAGCAAGCGCAATGGAGGCGAAGCT 32
consensus_9693#2      ------------------------------------------------------------
                                                                                  

consensus_9693#0      GTCGGCGGCGTCGAGGCGGCTGGCGCCGTCGCCCATCCAGCAGCTCTCCCACCTGGCGCA 120
consensus_9693#1      GTCGGCGGCGTCGAGGCGGGTGGCGCCGTCGCCCATCCAGCAGCTCTCCCACCTGGCGCA 92
consensus_9693#2      ------------------------------------------------------------
                                                                                  

consensus_9693#0      GTGCGCCGGCGCCGTCAACCTCGCCGAGGGCTTCCCCGACTTCCCGGCCCCCGCCCACGT 180
consensus_9693#1      GCGCGCCGGCGCCGTCAACCTCGCCGAGGGCTTCCCCGACTTCCCGGCCCCCGCCCACGT 152
consensus_9693#2      ------------------------------------------------------------
                                                                                  

consensus_9693#0      CAAGGCCGCCGCCGCCGCCGCCATCGCCGCCGACCTCAACCAGTACAGGCATGTGCAGGG 240
consensus_9693#1      CAAGGCCGCCGCCGCCGCCGCCATCGCCGCCGACCTCAACCAGTACAGGCATGTGCAGGG 212
consensus_9693#2      ------------------------------------------------------------
                                                                                  

consensus_9693#0      GATCTGCGACGCCCTCGCGGAGACGATGAAGCGGGACCATGGCCTCCGCGTCGACCCTCT 300
consensus_9693#1      GATCTGCGACGCCCTCGCGGAGACGATGAAGCGGGACCATGGCCTCCGCGTCGACCCTCT 272
consensus_9693#2      ------------------------------------------------------------
                                                                                  

consensus_9693#0      CACCGACTTCGCCGTTTGCTGCGGTCAGTCTGAGGCGTTTGCTGCAGCGATATTTGCAAT 360
consensus_9693#1      CACCGACTTCGCCGTTTGCTGCGGCCAGTCTGAGGCGTTTGCTGCAGCGATATTTGCAAT 332
consensus_9693#2      ------------------------------------------------------------
                                                                                  

consensus_9693#0      AATTGACCAGGGGGATGAAGTTTTGCTCTTTGATCCACCTTTTGAAACCTATCAAACGTG 420
consensus_9693#1      AATTGACCAAGGGGATGAAGTTTTGCTCTTTGATCCAGCTTTTGAAACCTATCAAACGTG 392
consensus_9693#2      ------------------------------------------------------------
                                                                                  

consensus_9693#0      CATTGAACTAGCCCGAGGTGTCCCTGTGTATGTGCCGTTGGATCCACCTTCTTGGACTTT 480
consensus_9693#1      CATTGAACTAGCCCGAGGTGTCCCT----------------------------------- 417
consensus_9693#2      ------------------------------------------------------------
                                                                                  

consensus_9693#0      GAATGAAGATAAATTTTTGAAATCCTTTACGAACCGGACAAAGGCAGTGGTCTTGAATAG 540
consensus_9693#1      ------------------------------------------------------------
consensus_9693#2      ------------------------------------------------------------
                                                                                  

consensus_9693#0      CCCGCACAATCCAGCAGGAAAGGTTTTTAGCAGAG-AGGAATTGCTTATCATTGCTCAAG 599
consensus_9693#1      CCCGCACAATCCAACAGGAAAGGTTTTTAGCAGAG-AGGAATTGCTTATCATTGCTCAAG 476
consensus_9693#2      CGTGCCGAATTCGGCACGA--GGCTTCCAGGAATGCAAGAAAGGACCATCATTACTTCCT 58
                      *  **  *** *  ** **  ** **  ** *  * * ***  *   ****** **    

consensus_9693#0      C-TTGTCAGAGGATGGACTGCTTTGCAATAACTGATGAGGTTTATGAGTACATTACTTAC 658
consensus_9693#1      C-TTGTCAGAAAATGGACTGCTTTGCAATAACTGATGAGGTTTATGAGTACATTACTTAC 535
consensus_9693#2      CACTGTCAAAAACT----TACAGCGTAACTGGTGAGCAGAACT-CAAGTTTGCACACTGC 113
                      *  ***** *   *    * *   * **    ***  **   *   ***        * *

consensus_9693#0      GATGATAACAAGCATATGTCATTGGCTTCGCTTCCAGGAATGCAAGAAAGGACCATCATT 718
consensus_9693#1      GATGAGAACAAGCATATCTCATTGGCTTCGCTTCCAGGAATGCAAGAAAGGACCATCATT 595
consensus_9693#2      AATGCAATCAACTACTTGTGAGACGTTT--------GGGACATATGAAGATTCTGTTGTC 165
                       ***  * ***  *  * * *   * **        ** *   * ***    *  *  * 

consensus_9693#0      ACTTCCTCACTGTCAAAAACTTACAGCGTAACTGGTTGGAGAATTGGATGGGCTTGTGCT 778
consensus_9693#1      ACTTCCTCACTGTCAAAAACTTACAGCGTAACTGGTTGGAGAATTGGATGGGCTTGTGCT 655
consensus_9693#2      T---------------AAACTGGC-------TAGGTTGGAGAATTGGATGGGCTTGTGCT 203
                                      *****  *         ***************************

consensus_9693#0      CCAGCTAATATCGCCTCAGCAATAAGAAACATCCATGTCAAGCTAACTGATTCAGCCCCT 838
consensus_9693#1      CCAGCTAATATCGCCTCAGCAATAAGAAACATCCATGTCAAGCTAACTGATTCAGCCCCT 715
consensus_9693#2      CCAGCTAATATCGCCTCAGCAATAAGAAACATCCATGTCAAGCTAACTGATTCAGCCCCT 263
                      ************************************************************

consensus_9693#0      GCACCATTCCAAGAAGCTGCGTTGGTTGCGTTAACAAGCCCACCAGACTTCTATTCATCC 898
consensus_9693#1      GCACCATTCCAAGAAGCTGCGTTGGTTGCGTTAACAAGCCCACCAGACTTCTATTCATCC 775
consensus_9693#2      GCACCATTCCAAGAAGCTGCGTTGGTTGCGTTAACAAGCCCACCAGACTTCTATTCATCC 323
                      ************************************************************

consensus_9693#0      TTGAAACAGGACTACACGGCGAGAAGAGACTTCATCCTTCAGGTGCTTACTGATTTTGGC 958
consensus_9693#1      TTGAAACAGGACTACACGGCGAGAAGAGACTTCATCCTTCAGGTGCTTACTGATTTT--- 832
consensus_9693#2      TTGAAACAGGACTACACGGCGAGAAGAGACTTCATCCTTCAGGTGCTTACTGATTTTGGC 383
                      *********************************************************   

consensus_9693#0      TTCCGCATTAGCTTCAAGCCACAAGGCTCGATCTTTGTATTTGTTGAGCTTCCAAGGTCA 1018
consensus_9693#1      ------------------------------------------------------------
consensus_9693#2      TTCCGCATTAGCTTCAAGCCACAAGGCTCGATCTTTGTATTTGTTGAGCTTCCAAGGTCA 443
                                                                                  

consensus_9693#0      TGGCAACTTTCAGATATGGATTTCGTGACGAACTTGATAAAAAATGCTGGTGTGGCGGCC 1078
consensus_9693#1      ------------------------------------------------------------
consensus_9693#2      TGGCAACTTTCAGATATGGATTTCGTGACGAACTTGATAAAAAATGCTGGTGTGG----- 498
                                                                                  

consensus_9693#0      GTGCCTGGTCGGGGATTCTTCCACTCAAGTACCGACGACCCAAGCTACCATCACCGGTAT 1138
consensus_9693#1      ------------------------------------------------------------
consensus_9693#2      ------------------------------------------------------------
                                                                                  

consensus_9693#0      GTCAGGTTTGCGTTTTGCAAGAGCAATGACACCCTAAACGCTGCTGCCGAGAAGATGAGG 1198
consensus_9693#1      ------------------------------------------------------------
consensus_9693#2      ------------------------------------------------------------
                                                                                  

consensus_9693#0      AAGCTAGCAGTCAGTCATGATGCAAGGTTATTGAGGCCTACTGATGATGGAGAAGCAGGT 1258
consensus_9693#1      ------------------------------------------------------------
consensus_9693#2      ------------------------------------------------------------
                                                                                  

consensus_9693#0      CAGACTGCATCAGCCACCTCTCCTTGATCACAGCCATAGTATCTGCGTTCCAAATGTTAT 1318
consensus_9693#1      ------------------------------------------------------------
consensus_9693#2      ------------------------------------------------------------
                                                                                  

consensus_9693#0      TTTGCTTTAATTTTTGGGGAACCATCAAGCATTCAAGTTGCAGGGTAGAAGTTTGTTTTA 1378
consensus_9693#1      ------------------------------------------------------------
consensus_9693#2      ------------------------------------------------------------
                                                                                  

consensus_9693#0      ATCAACCGTAGTATAAGTAAACATTTAAGTCAGAAGATGACTGTCCTGGTAAGTGTTTAA 1438
consensus_9693#1      ------------------------------------------------------------
consensus_9693#2      ------------------------------------------------------------
                                                                                  

consensus_9693#0      GCCCAAATGGGTTGCCTTCATTTTTTATGCAATCCAAACAGTTCTTAAAAATCTGAAAAA 1498
consensus_9693#1      ------------------------------------------------------------
consensus_9693#2      ------------------------------------------------------------
                                                                                  

consensus_9693#0      AAAATATATATAGCACATAATAAG 1522
consensus_9693#1      ------------------------
consensus_9693#2      ------------------------
                                              




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)