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Oryza sativa
cluster # 9694 cluster # 9694       Sequences # 6       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9694#0 length = 3027 sequences # 4  
consensus_9694#1 length = 616 sequences # 2  

consensusID : consensus_9694#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 3027
fasta sequence
                              [TTCTTCGTTGTGTTCCCAACTCGGCAACTGCTTCTTCCTCCTCCTCTCCCTCCCAGATCTCGATGCTGCGGAGGCAGCCCGGCGACGCGCCGGCGTCGGCGGCGGCATCGGAGGCCGACCTCGCGCAGCTCTCCACCGCCATCGCCGCCGGGGAGGACCTGGGCCCGTTCGTGCGGCGCGCGTTCGCGTGCGGGCGCCCCGAGCCGCTGCTCGCCTCGCTCCGGGCGGCGGCGCGGGACCGGGAGGCCGAGATCGAGGAGCTCTGCCGCGCCCACTTCCACGACTTCATCCGCGCCGTCGACGACCTCCGCTCCCTCCTCGCCGACGCCGACGCGCTCAAGGGCTCCCTCTCGGCCTCCCACGCCGCGCTCCTCTCCTCCGCCGCCCCGCTTCTCGCCTCGCTCGAGTCCTTCCTCGCCGCGCGCGGGCTCGCCGGGAACCTCTCCTCCGCGCTCGCATCCTCCCGACGCTGCGTCCGCCTCCTGGCGCTCGCCAACCGCGCCAACGCGCACCTGCAGGGCGGCAACCACAACCTGTACCTCGCCCTGCGCGCCGTCGATGCCATTGACCGCGACCTCGCCTCCGGCCCCGAGCCGCTGCCGCTCCCCACCCTCCGCCGCATGTTGCTCAGCCTCGTCCCCGCGGTGCGCGCCCACGCCGAGCGCGAGATCTCCAGGGAGTTCTCCGATTGGATGGTTAGCATCCGCGCCGCGTCGCGGCACCTTGGCCAGGTAGCCATTGGCCGCTCAGCTGCCGCCAGGCAGCGCCAGGAGGAGCTCCGATCCAAGCACCGCCCGCTGGAGGAGTGCATAACGCTGGACGACGATGGCGTCGGCGACCTTGATGACTTCGCAGCTGCCGCCGCAACAGCAGACGTTGCAGATGGTGCCGCTGCAGCATCATTCGACCTCACGCCACTCTACCGCGCGATGCATATACACCATACCCTGGCACTTGGCGAGCGGTTCAAGAAGTATTACCTGGAGAACAGGAAGCTTCAGCTGACATCGGATTTCGATGTGATTGCAGCAACACCGTTCCTCGAGTCTCACCAGGTGTTCTTCTCGCAGATTGCTGGTTTCTTCATTGTCGAGGACCGCGTGTTTCGGACAGGGGGTGGGCTCACGTCCCGGCCTGATGTAGATGCATTGTGGGATTCTGCTGTTGCAAAGATGGTCTCTGTAATGGAGGACAACTTCTCTCGCATGCAGACAGCAAATCACCTGCTTCTGATAACTGATTATGCTGCTTTACTTTCTGCCACGATGAGGCGGTATGGTTATCCAGTTGGGATGCTGCTCGATGTGCTGGCTAGGCACCGGGACAAGTACCATGACTTGCTACTTGCTGATTGCCGTAGGCAGGTGGTAGAGGCACTGGCTGCAGATAAGTTTGATCAGATGCTGATGAGGAAAGAGTATGAATACTCAATGAACGTGCTTGCATTTGGGATCCAAAGCTCGGATATCACCCCAGCGTTCCCGTATGTTGCTCCATTCTCATGCACCGTGCCAGATATTTGCCGCATAGTTCGGTCATTCATCGAGGATTCTGTAAGCTTCATGGCACATGGGGGTGGTGGGGACACTTATGCAGCCGTGAAGAAGTACCTTGGTCGGATTCTCTCGGAGGTGGTTGATGCATCGATACAAAAGCTCGTGGATTCTGGTGGTGGTCTGAGTGTGTCCCAGGCAATGCAAGTTGCTGCAAATATGTCTGTTATGGAGCGTGCGTGTGAGTTTTTCACAGGCCATGCAGCGCAACTGTGTGGTGTGCCACTTCGTGCAGTGGAGCGTGGGCGGCGTGACTTCCCACTTCGCAAGTCCCGTGATGCTGCAGAGGCACTTTTACTACGGCTTCTACGTTCCAAGGTTGATGAGTTCATGGGGCAATCTGATGGTGTCACTTGGATGACTGATGATCCACCAGCTGGTGGAAATGAGTATGCAAACGAGGTCATTATCTATCTCGAGACACTCACTTCAACTGCACAGCAGATCCTCCCTCTTCCGGTGCTCCGCCGTGTCCTTGTGGCAGTGCTTGCCCACATCTCTGAGAGGATTGTCGGGCTCTTCTTGAATGATTCAGTCAAGCGGTTTAATGCTAGTGCAGTCACCGGAATTGATACCGATCTCAAAATGTTCGAGGCGTTTGGGGAGAGCATGTCCAGTTTGTTTGTGGACTCTGATCAAGAGTCTGCAGCAAATGAAATGAAGGCTGCACTTGTGGAGGCGAGACAGCTAGTGAATCTTCTTATGAGCAACAGCCCAGAGAATTTCCTTAATCCAGTGATCCGTGAGAAGAGCTATAACAAGCTTGATTACAAAAAGGTGGCAGCCATATCAGAGAAGTTTCGGGATTCCTCAGAGAGCTATTTCTCAACATTTGGAACTAGGGGTGCTAGGCAAAATCCGAAGAAGAAATCTCTTGATACTCTCATCAAAAGGCTCAGAGAAGCCAGCTAGAGTTGCTAGTCCTCTCCTCTGCACCAGTTGCCCACAGTGCAGAGCAAAGAAGGGAGAAGAGTAGAACCTGGAGGAAGAACAAGCAGAGGAGTAAGAAGAGCAGAGCAGGGGAAGAGGACAAAGAGTTAAAGAGAGGCAGATCGGCGCAGGGGGCAAAGAAGAGAAGAGCAGAGGTGGAGGAGATAAGGAGATAACTGGGAGGTTCAGTGCTTTTCCCTCCAGATCTGGAGCAGGGAGGGTACGGTGGTCGACGAACGAGGCTGCAGGGGTCCTGTGGTGACTGGCTGGTTTGAGGAACTTAGGAGACTGCCTGGTTGCCATGGTGAATTGGTGATGCCTTCATAAAATAGATGGTATACTATATATTGCTTAACTACCCATATTCTGTAGTCTAACAGGGGTAATCTGTCCATCGATAACTGCTTATAGTTATAGACTCATAGGACTGGTGTAGATGTTCTGAAGCTTATCATGTGAATTGGGTAATTAACATTGCATGGTCATCAAGTCTCTCCTTAATATTTATTTGGACTAAACAAATTTAGTTAGTTAAGACCTGCTA]

[+] EMBL AK102963             [TTCTTCGTTGTGTTCCCAACTCGGCAACTGCTTCTTCCTCCTCCTCTCCCTCCCAGATCTCGATGCTGCGGAGGCAGCCCGGCGACGCGCCGGCGTCTGCGGCGGCATCGGAGGCCGACCTCGCGCAGCTCTCCACCGCCATCGCCGCCGGGGAGGACCTGGGCCCGTTCGTGCGGCGCGCGTTCGCGTGCGGGCGCCCCGAGCCGCTGCTCGCCTCGCTCCGGGCGGCGGCGCGGGACCGGGAGGCCGAGATCGAGGAGCTCTGCCGCGCCCACTTCCACGACTTCATCCGCGCCGTCGACGACCTCCGCTCCCTCCTCGCCGACGCCGACGCGCTCAAGGGCTCCCTCTCGGCCTCCCACGCCGCGCTCCTCTCCTCCGCCGCCCCGCTTCTCGCCTCGCTCGAGTCCTTCCTCGCCGCGCGCGGGCTCGCCGGGAACCTCTCCTCCGCGCTCGCATCCTCCCGACGCTGCGTCCGCCTCCTGGCGCTCGCCAACCGCGCCAACGCGCACCTGCAGGGCGGCAACCACAACCTGTACCTCGCCCTGCGCGCCGTCGATGCCATTGACCGCGACCTCGCCTCCGGCCCCGAGCCGCTGCCGCTCCCCACCCTCCGCCGCATGTTGCTCAGCCTCGTCCCCGCGGTGCGCGCCCACGCCGAGCGCGAGATCTCCAGGGAGTTCTCCGATTGGATGGTTAGCATCCGCGCCGCGTCGCGGCACCTTGGCCAGGTAGCCATTGGCCGCTCAGCTGCCGCCAGGCAGCGCCAGGAGGAGCTCCGATCCAAGCACCGCCCGCTGGAGGAGTGCATAACGCTGGACGACGATGGCGTCGGCGACCTTGATGACTTCGCAGCTGCCGCCGCAACAGCAGACGTTGCAGATGGTGCCGCTGCAGCATCATTCGACCTCACGCCACTCTACCGCGCGATGCATATACACCATACCCTGGCACTTGGCGAGCGGTTCAAGAAGTATTACCTGGAGAACAGGAAGCTTCAGCTGACATCGGATTTCGATGTGATTGCAGCAACACCGTTCCTCGAGTCTCACCAGGTGTTCTTCTCGCAGATTGCTGGTTTCTTCATTGTCGAGGACCGCGTGTTTCGGACAGGGGGTGGGCTCACGTCCCGGCCTGATGTAGATGCATTGTGGGATTCTGCTGTTGCAAAGATGGTCTCTGTAATGGAGGACAACTTCTCTCGCATGCAGACAGCAAATCACCTGCTTCTGATAACTGATTATGCTGCTTTACTTTCTGCCACGATGAGGCGGTATGGTTATCCAGTTGGGATGCTGCTCGATGTGCTGGCTAGGCACCGGGACAAGTACCATGACTTGCTACTTGCTGATTGCCGTAGGCAGGTGGTAGAGGCACTGGCTGCAGATAAGTTTGATCAGATGCTGATGAGGAAAGAGTATGAATACTCAATGAACGTGCTTGCATTTGGGATCCAAAGCTCGGATATCACCCCAGCGTTCCCGTATGTTGCTCCATTCTCATGCACCGTGCCAGATATTTGCCGCATAGTTCGGTCATTCATCGAGGATTCTGTAAGCTTCATGGCACATGGGGGTGGTGGGGACACTTATGCAGCCGTGAAGAAGTACCTTGGTCGGATTCTCTCGGAGGTGGTTGATGCATCGATACAAAAGCTCGTGGATTCTGGTGGTGGTCTGAGTGTGTCCCAGGCAATGCAAGTTGCTGCAAATATGTCTGTTATGGAGCGTGCGTGTGAGTTTTTCACAGGCCATGCAGCGCAACTGTGTGGTGTGCCACTTCGTGCAGTGGAGCGTGGGCGGCGTGACTTCCCACTTCGCAAGTCCCGTGATGCTGCAGAGGCACTTTTACTACGGCTTCTACGTTCCAAGGTTGATGAGTTCATGGGGCAATCTGATGGTGTCACTTGGATGACTGATGATCCACCAGCTGGTGGAAATGAGTATGCAAACGAGGTCATTATCTATCTCGAGACACTCACTTCAACTGCACAGCAGATCCTCCCTCTTCCGGTGCTCCGCCGTGTCCTTGTGGCAGTGCTTGCCCACATCTCTGAGAGGATTGTCGGGCTCTTCTTGAATGATTCAGTCAAGCGGTTTAATGCTAGTGCAGTCACCGGAATTGATACCGATCTCAAAATGTTCGAGGCGTTTGGGGAGAGCATGTCCAGTTTGTTTGTGGACTCTGATCAAGAGTCTGCAGCAAATGAAATGAAGGCTGCACTTGTGGAGGCGAGACAGCTAGTGAATCTTCTTATGAGCAACAGCCCAGAGAATTTCCTTAATCCAGTGATCCGTGAGAAGAGCTATAACAAGCTTGATTACAAAAAGGTGGCAGCCATATCAGAGAAGTTTCGGGATTCCTCAGAGAGCTATTTCTCAACATTTGGAACTAGGGGTGCTAGGCAAAATCCGAAGAAGAAATCTCTTGATACTCTCATCAAAAGGCTCAGAGAAGCCAGCTAGAGTTGCTAGTCCTCTCCTCTGCACCAGTTGCCCACAGTGCAGAGCAAAGAAGGGAGAAGAGTAGAACCTGGAGGAAGAACAAGCAGAGGAGTAAGAAGAGCAGAGCAGGGGAAGAGGACAAAGAGTTAAAGAGAGGCAGATCGGCGCAGGGGGCAAAGAAGAGAAGAGCAGAGGTGGAGGAGATAAGGAGATAACTGGGAGGTTCAGTGCTTTTCCCTCCAGATCTGGAGCAGGGAGGGTACGGTGGTCGACGAACGAGGCTGCAGGGGTCCTGTGGTGACTGGCTGGTTTGAGGAACTTAGGAGACTGCCTGGTTGCCATGGTGAATTGGTGATGCCTTCATAAAATAGATGGTATACTATATATTGCTTAACTACCCATATTCTGTAGTCTAACAGGGGTAATCTGTCCATCGATAACTGCTTATAGTTATAGACTCATAGGACTGGTGTAGATGTTCTGAAGCTTATCATGTGAATTGGGTAATTAACATTGCATGGTCATCAAGTCTCTCCTTAATATTTATTTGGACTAAACAAATTTAGTTAGTTAAGACCTGCTA]
[+] EMBL CB638818             [                            TGCTTCTTCCTCCTCCTCTCCCTCCCAGATCTCGATGCTGCGGAGGCAGCCCGGCGACGCGCCGGCGTCGGCGGCGGCATCGGAGGCCGACCTCGCGCAGCTCTCCACCGCCATCGCCGCCGGGGAGGACCTGGGCCCGTTCGTGCGGCGCGCGTTCGCGTGCGGGCGCCCCGAGCCGCTGCTCGCCTCGCTCCGGGCGGCGGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CB639462             [                                             CTCCCTCCCAAATCTCGATGCTGCGGAGGCAGCCCGGCGACGCGCCGGCGTCGGCGGCGGCATCGGAGGCCGACCTCGCGCAGCTCTCCACCGCCATCGCCGCCGGGGAGGACCTGGGCCCGTTCGTGCGGCGCGCGTTCGCGTGCGGGCGCCCCGAGCCGCTGCTCGCCTCGCTCCGGGCGGCGGCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CB638501             [                                             CTCCCTCCCANATCTCGATGCTGCGGAGGCAGCCCGGCGACGCGCCGGCGTCGGCGGCGGCATCGGAGGCCGACCTCGCGCAGCTCTCCACCGCCATCGCCGCCGGGGAGGACCTGGGCCCGTTCGTGCGGCGCGCGTTCGCGTGCGGGCGCCCCGAGCCGCTGCTCGCCTCGCTCCGGGCGGCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]


>consensus_9694#0 TTCTTCGTTGTGTTCCCAACTCGGCAACTGCTTCTTCCTCCTCCTCTCCCTCCCAGATCT CGATGCTGCGGAGGCAGCCCGGCGACGCGCCGGCGTCGGCGGCGGCATCGGAGGCCGACC TCGCGCAGCTCTCCACCGCCATCGCCGCCGGGGAGGACCTGGGCCCGTTCGTGCGGCGCG CGTTCGCGTGCGGGCGCCCCGAGCCGCTGCTCGCCTCGCTCCGGGCGGCGGCGCGGGACC GGGAGGCCGAGATCGAGGAGCTCTGCCGCGCCCACTTCCACGACTTCATCCGCGCCGTCG ACGACCTCCGCTCCCTCCTCGCCGACGCCGACGCGCTCAAGGGCTCCCTCTCGGCCTCCC ACGCCGCGCTCCTCTCCTCCGCCGCCCCGCTTCTCGCCTCGCTCGAGTCCTTCCTCGCCG CGCGCGGGCTCGCCGGGAACCTCTCCTCCGCGCTCGCATCCTCCCGACGCTGCGTCCGCC TCCTGGCGCTCGCCAACCGCGCCAACGCGCACCTGCAGGGCGGCAACCACAACCTGTACC TCGCCCTGCGCGCCGTCGATGCCATTGACCGCGACCTCGCCTCCGGCCCCGAGCCGCTGC CGCTCCCCACCCTCCGCCGCATGTTGCTCAGCCTCGTCCCCGCGGTGCGCGCCCACGCCG AGCGCGAGATCTCCAGGGAGTTCTCCGATTGGATGGTTAGCATCCGCGCCGCGTCGCGGC ACCTTGGCCAGGTAGCCATTGGCCGCTCAGCTGCCGCCAGGCAGCGCCAGGAGGAGCTCC GATCCAAGCACCGCCCGCTGGAGGAGTGCATAACGCTGGACGACGATGGCGTCGGCGACC TTGATGACTTCGCAGCTGCCGCCGCAACAGCAGACGTTGCAGATGGTGCCGCTGCAGCAT CATTCGACCTCACGCCACTCTACCGCGCGATGCATATACACCATACCCTGGCACTTGGCG AGCGGTTCAAGAAGTATTACCTGGAGAACAGGAAGCTTCAGCTGACATCGGATTTCGATG TGATTGCAGCAACACCGTTCCTCGAGTCTCACCAGGTGTTCTTCTCGCAGATTGCTGGTT TCTTCATTGTCGAGGACCGCGTGTTTCGGACAGGGGGTGGGCTCACGTCCCGGCCTGATG TAGATGCATTGTGGGATTCTGCTGTTGCAAAGATGGTCTCTGTAATGGAGGACAACTTCT CTCGCATGCAGACAGCAAATCACCTGCTTCTGATAACTGATTATGCTGCTTTACTTTCTG CCACGATGAGGCGGTATGGTTATCCAGTTGGGATGCTGCTCGATGTGCTGGCTAGGCACC GGGACAAGTACCATGACTTGCTACTTGCTGATTGCCGTAGGCAGGTGGTAGAGGCACTGG CTGCAGATAAGTTTGATCAGATGCTGATGAGGAAAGAGTATGAATACTCAATGAACGTGC TTGCATTTGGGATCCAAAGCTCGGATATCACCCCAGCGTTCCCGTATGTTGCTCCATTCT CATGCACCGTGCCAGATATTTGCCGCATAGTTCGGTCATTCATCGAGGATTCTGTAAGCT TCATGGCACATGGGGGTGGTGGGGACACTTATGCAGCCGTGAAGAAGTACCTTGGTCGGA TTCTCTCGGAGGTGGTTGATGCATCGATACAAAAGCTCGTGGATTCTGGTGGTGGTCTGA GTGTGTCCCAGGCAATGCAAGTTGCTGCAAATATGTCTGTTATGGAGCGTGCGTGTGAGT TTTTCACAGGCCATGCAGCGCAACTGTGTGGTGTGCCACTTCGTGCAGTGGAGCGTGGGC GGCGTGACTTCCCACTTCGCAAGTCCCGTGATGCTGCAGAGGCACTTTTACTACGGCTTC TACGTTCCAAGGTTGATGAGTTCATGGGGCAATCTGATGGTGTCACTTGGATGACTGATG ATCCACCAGCTGGTGGAAATGAGTATGCAAACGAGGTCATTATCTATCTCGAGACACTCA CTTCAACTGCACAGCAGATCCTCCCTCTTCCGGTGCTCCGCCGTGTCCTTGTGGCAGTGC TTGCCCACATCTCTGAGAGGATTGTCGGGCTCTTCTTGAATGATTCAGTCAAGCGGTTTA ATGCTAGTGCAGTCACCGGAATTGATACCGATCTCAAAATGTTCGAGGCGTTTGGGGAGA GCATGTCCAGTTTGTTTGTGGACTCTGATCAAGAGTCTGCAGCAAATGAAATGAAGGCTG CACTTGTGGAGGCGAGACAGCTAGTGAATCTTCTTATGAGCAACAGCCCAGAGAATTTCC TTAATCCAGTGATCCGTGAGAAGAGCTATAACAAGCTTGATTACAAAAAGGTGGCAGCCA TATCAGAGAAGTTTCGGGATTCCTCAGAGAGCTATTTCTCAACATTTGGAACTAGGGGTG CTAGGCAAAATCCGAAGAAGAAATCTCTTGATACTCTCATCAAAAGGCTCAGAGAAGCCA GCTAGAGTTGCTAGTCCTCTCCTCTGCACCAGTTGCCCACAGTGCAGAGCAAAGAAGGGA GAAGAGTAGAACCTGGAGGAAGAACAAGCAGAGGAGTAAGAAGAGCAGAGCAGGGGAAGA GGACAAAGAGTTAAAGAGAGGCAGATCGGCGCAGGGGGCAAAGAAGAGAAGAGCAGAGGT GGAGGAGATAAGGAGATAACTGGGAGGTTCAGTGCTTTTCCCTCCAGATCTGGAGCAGGG AGGGTACGGTGGTCGACGAACGAGGCTGCAGGGGTCCTGTGGTGACTGGCTGGTTTGAGG AACTTAGGAGACTGCCTGGTTGCCATGGTGAATTGGTGATGCCTTCATAAAATAGATGGT ATACTATATATTGCTTAACTACCCATATTCTGTAGTCTAACAGGGGTAATCTGTCCATCG ATAACTGCTTATAGTTATAGACTCATAGGACTGGTGTAGATGTTCTGAAGCTTATCATGT GAATTGGGTAATTAACATTGCATGGTCATCAAGTCTCTCCTTAATATTTATTTGGACTAA ACAAATTTAGTTAGTTAAGACCTGCTA



consensusID : consensus_9694#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 616
fasta sequence
                              [GGGCTCTTCTTGAATGATTCAGTCAAGCGGTTTAATGCTAGTGCAGTCACCGGAATTGATACCGATCTCAAAATGTTCGAGGCGTTTGGGGAGAGCATGTCCAGTTTGTTTGTGGACTCTGATCAAGAGTCTGCAGCAAATGAAATGAAGGCTGCACTTGTGGAGGCGAGACAGCTAGTGAATCTTCTTATGAGCAACAGCCCAGAGAATTTCCTTAATCCAGTGATCCGTGAGAAGAGCTATAACAAGCTTGATTACAAAAAGGTGGCAGCCATATCAGAGAAGTTTCGGGATTCCTCAGAGAGCTATTTCTCAACATTTGGAACTAGGGGTGCTAGGCAAAATCCGAAGAAGAAATCTCTTGATACTCTCATCAAAAGGCTCAGAGAAGCCAGCTAGAGTTGCTAGTCCTCTCCTCTGCAGTAAGATAATATATGTTCTTTGCCTTTCACCTTCTCATGTTTTCAGTGTAATTTAGCCTGCATTTGGTGTGCATTATTCATATTAAAATCACC-TTTTT-CAATATACTGTAATTTTGCTAATGTTAGAGTGCCTGCTTCATATGTGTTGATATTGCAGTGTTAATTTTTTAACTCTTTACTGGAAATCAAGATAT]

[-] EMBL CB638819             [GGGCTCTTCTTGAATGATTCAGTCAAGCGGTTTAATGCTAGTGCAGTCACCGGAATTGATACCGATCTCAAAATGTTCGAGGCGTTTGGGGAGAGCATGTCCAGTTTGTTTGTGGACTCTGATCAAGAGTCTGCAGCAAATGAAATGAAGGCTGCACTTGTGGAGGCGAGACAGCTAGTGAATCTTCTTATGAGCAACAGCCCAGAGAATTTCCTTAATCCAGTGATCCGTGAGAAGAGCTATAACAAGCTTGATTACAAAAAGGTGGCAGCCATATCAGAGAAGTTTCGGGATTCCTCAGAGAGCTATTTCTCAACATTTGGAACTAGGGGTGCTAGGCAAAATCCGAAGAAGAAATCTCTTGATACTCTCATCAAAAGGCTCAGAGAAGCCAGCTAGAGTTGCTAGTCCTCTCCTCTGCAGTAAGATAATATATGTTCTTTGCCTTTCACCTTCTCATGTTTTCAGTGTAATTTAGCCTGCATTTGGTGTGCATTATTCATATTAAAATCACC TTTTT CAATATACTGT                                                                                     ]
[-] EMBL CB638502             [                     GTCAAGCGGTTTAATGCTAGTGCAGTCACCGGAATTGATACCGATCTCAAAATGTTCGAGGCGTTTGGGGAGAGCATGTCCAGTTTGTTTGTGGACTCTGATCAAGAGTCTGCAGCAAATGAAATGAAGGCTGCACTTGTGGAGGCGAGACAGCTAGTGAATCTTCTTATGAGCAACAGCCCAGAGAATTTCTTTAATCCAGTGATCCGTGAGAAGAGCTATAACAAGCTTGATTACAAAAAGGTGGCAGCCATATCAGAGAAGTTTCGGGATTCCTCAGAGAGCTATTTCTCAACATTTGGAACTAGGGGTGCTAGGCAAAATCCGAAGAAGAAATCTCTTGATACTCTCATCAAAAGGCTCAGAGAAGCCAGCTAGAGTTGCTAGTCCTCTCCTCTGCAGTAAGATAATATATGTTCTTTGCCTTTCACCTTCTCATGTTTTCA TGTAATTTAGCCTGCATTTGGTGTGCATTATTCATATTAAAATCACCATTTTTCCAATATACTGTAATTTTGCTAATGTTAGAGTGCCTGCTTCATATGTGTTGATATTGCAGTGTTAATTTTTTAACTCTTTACTGGAAATCAAGATAT]


>consensus_9694#1 GGGCTCTTCTTGAATGATTCAGTCAAGCGGTTTAATGCTAGTGCAGTCACCGGAATTGAT ACCGATCTCAAAATGTTCGAGGCGTTTGGGGAGAGCATGTCCAGTTTGTTTGTGGACTCT GATCAAGAGTCTGCAGCAAATGAAATGAAGGCTGCACTTGTGGAGGCGAGACAGCTAGTG AATCTTCTTATGAGCAACAGCCCAGAGAATTTCCTTAATCCAGTGATCCGTGAGAAGAGC TATAACAAGCTTGATTACAAAAAGGTGGCAGCCATATCAGAGAAGTTTCGGGATTCCTCA GAGAGCTATTTCTCAACATTTGGAACTAGGGGTGCTAGGCAAAATCCGAAGAAGAAATCT CTTGATACTCTCATCAAAAGGCTCAGAGAAGCCAGCTAGAGTTGCTAGTCCTCTCCTCTG CAGTAAGATAATATATGTTCTTTGCCTTTCACCTTCTCATGTTTTCAGTGTAATTTAGCC TGCATTTGGTGTGCATTATTCATATTAAAATCACCTTTTTCAATATACTGTAATTTTGCT AATGTTAGAGTGCCTGCTTCATATGTGTTGATATTGCAGTGTTAATTTTTTAACTCTTTA CTGGAAATCAAGATAT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9694#0      TTCTTCGTTGTGTTCCCAACTCGGCAACTGCTTCTTCCTCCTCCTCTCCCTCCCAGATCT 60
consensus_9694#1      ------------------------------------------------------------
                                                                                  

consensus_9694#0      CGATGCTGCGGAGGCAGCCCGGCGACGCGCCGGCGTCGGCGGCGGCATCGGAGGCCGACC 120
consensus_9694#1      ------------------------------------------------------------
                                                                                  

consensus_9694#0      TCGCGCAGCTCTCCACCGCCATCGCCGCCGGGGAGGACCTGGGCCCGTTCGTGCGGCGCG 180
consensus_9694#1      ------------------------------------------------------------
                                                                                  

consensus_9694#0      CGTTCGCGTGCGGGCGCCCCGAGCCGCTGCTCGCCTCGCTCCGGGCGGCGGCGCGGGACC 240
consensus_9694#1      ------------------------------------------------------------
                                                                                  

consensus_9694#0      GGGAGGCCGAGATCGAGGAGCTCTGCCGCGCCCACTTCCACGACTTCATCCGCGCCGTCG 300
consensus_9694#1      ------------------------------------------------------------
                                                                                  

consensus_9694#0      ACGACCTCCGCTCCCTCCTCGCCGACGCCGACGCGCTCAAGGGCTCCCTCTCGGCCTCCC 360
consensus_9694#1      ------------------------------------------------------------
                                                                                  

consensus_9694#0      ACGCCGCGCTCCTCTCCTCCGCCGCCCCGCTTCTCGCCTCGCTCGAGTCCTTCCTCGCCG 420
consensus_9694#1      ------------------------------------------------------------
                                                                                  

consensus_9694#0      CGCGCGGGCTCGCCGGGAACCTCTCCTCCGCGCTCGCATCCTCCCGACGCTGCGTCCGCC 480
consensus_9694#1      ------------------------------------------------------------
                                                                                  

consensus_9694#0      TCCTGGCGCTCGCCAACCGCGCCAACGCGCACCTGCAGGGCGGCAACCACAACCTGTACC 540
consensus_9694#1      ------------------------------------------------------------
                                                                                  

consensus_9694#0      TCGCCCTGCGCGCCGTCGATGCCATTGACCGCGACCTCGCCTCCGGCCCCGAGCCGCTGC 600
consensus_9694#1      ------------------------------------------------------------
                                                                                  

consensus_9694#0      CGCTCCCCACCCTCCGCCGCATGTTGCTCAGCCTCGTCCCCGCGGTGCGCGCCCACGCCG 660
consensus_9694#1      ------------------------------------------------------------
                                                                                  

consensus_9694#0      AGCGCGAGATCTCCAGGGAGTTCTCCGATTGGATGGTTAGCATCCGCGCCGCGTCGCGGC 720
consensus_9694#1      ------------------------------------------------------------
                                                                                  

consensus_9694#0      ACCTTGGCCAGGTAGCCATTGGCCGCTCAGCTGCCGCCAGGCAGCGCCAGGAGGAGCTCC 780
consensus_9694#1      ------------------------------------------------------------
                                                                                  

consensus_9694#0      GATCCAAGCACCGCCCGCTGGAGGAGTGCATAACGCTGGACGACGATGGCGTCGGCGACC 840
consensus_9694#1      ------------------------------------------------------------
                                                                                  

consensus_9694#0      TTGATGACTTCGCAGCTGCCGCCGCAACAGCAGACGTTGCAGATGGTGCCGCTGCAGCAT 900
consensus_9694#1      ------------------------------------------------------------
                                                                                  

consensus_9694#0      CATTCGACCTCACGCCACTCTACCGCGCGATGCATATACACCATACCCTGGCACTTGGCG 960
consensus_9694#1      ------------------------------------------------------------
                                                                                  

consensus_9694#0      AGCGGTTCAAGAAGTATTACCTGGAGAACAGGAAGCTTCAGCTGACATCGGATTTCGATG 1020
consensus_9694#1      ------------------------------------------------------------
                                                                                  

consensus_9694#0      TGATTGCAGCAACACCGTTCCTCGAGTCTCACCAGGTGTTCTTCTCGCAGATTGCTGGTT 1080
consensus_9694#1      ------------------------------------------------------------
                                                                                  

consensus_9694#0      TCTTCATTGTCGAGGACCGCGTGTTTCGGACAGGGGGTGGGCTCACGTCCCGGCCTGATG 1140
consensus_9694#1      ------------------------------------------------------------
                                                                                  

consensus_9694#0      TAGATGCATTGTGGGATTCTGCTGTTGCAAAGATGGTCTCTGTAATGGAGGACAACTTCT 1200
consensus_9694#1      ------------------------------------------------------------
                                                                                  

consensus_9694#0      CTCGCATGCAGACAGCAAATCACCTGCTTCTGATAACTGATTATGCTGCTTTACTTTCTG 1260
consensus_9694#1      ------------------------------------------------------------
                                                                                  

consensus_9694#0      CCACGATGAGGCGGTATGGTTATCCAGTTGGGATGCTGCTCGATGTGCTGGCTAGGCACC 1320
consensus_9694#1      ------------------------------------------------------------
                                                                                  

consensus_9694#0      GGGACAAGTACCATGACTTGCTACTTGCTGATTGCCGTAGGCAGGTGGTAGAGGCACTGG 1380
consensus_9694#1      ------------------------------------------------------------
                                                                                  

consensus_9694#0      CTGCAGATAAGTTTGATCAGATGCTGATGAGGAAAGAGTATGAATACTCAATGAACGTGC 1440
consensus_9694#1      ------------------------------------------------------------
                                                                                  

consensus_9694#0      TTGCATTTGGGATCCAAAGCTCGGATATCACCCCAGCGTTCCCGTATGTTGCTCCATTCT 1500
consensus_9694#1      ------------------------------------------------------------
                                                                                  

consensus_9694#0      CATGCACCGTGCCAGATATTTGCCGCATAGTTCGGTCATTCATCGAGGATTCTGTAAGCT 1560
consensus_9694#1      ------------------------------------------------------------
                                                                                  

consensus_9694#0      TCATGGCACATGGGGGTGGTGGGGACACTTATGCAGCCGTGAAGAAGTACCTTGGTCGGA 1620
consensus_9694#1      ------------------------------------------------------------
                                                                                  

consensus_9694#0      TTCTCTCGGAGGTGGTTGATGCATCGATACAAAAGCTCGTGGATTCTGGTGGTGGTCTGA 1680
consensus_9694#1      ------------------------------------------------------------
                                                                                  

consensus_9694#0      GTGTGTCCCAGGCAATGCAAGTTGCTGCAAATATGTCTGTTATGGAGCGTGCGTGTGAGT 1740
consensus_9694#1      ------------------------------------------------------------
                                                                                  

consensus_9694#0      TTTTCACAGGCCATGCAGCGCAACTGTGTGGTGTGCCACTTCGTGCAGTGGAGCGTGGGC 1800
consensus_9694#1      ------------------------------------------------------------
                                                                                  

consensus_9694#0      GGCGTGACTTCCCACTTCGCAAGTCCCGTGATGCTGCAGAGGCACTTTTACTACGGCTTC 1860
consensus_9694#1      ------------------------------------------------------------
                                                                                  

consensus_9694#0      TACGTTCCAAGGTTGATGAGTTCATGGGGCAATCTGATGGTGTCACTTGGATGACTGATG 1920
consensus_9694#1      ------------------------------------------------------------
                                                                                  

consensus_9694#0      ATCCACCAGCTGGTGGAAATGAGTATGCAAACGAGGTCATTATCTATCTCGAGACACTCA 1980
consensus_9694#1      ------------------------------------------------------------
                                                                                  

consensus_9694#0      CTTCAACTGCACAGCAGATCCTCCCTCTTCCGGTGCTCCGCCGTGTCCTTGTGGCAGTGC 2040
consensus_9694#1      ------------------------------------------------------------
                                                                                  

consensus_9694#0      TTGCCCACATCTCTGAGAGGATTGTCGGGCTCTTCTTGAATGATTCAGTCAAGCGGTTTA 2100
consensus_9694#1      --------------------------GGGCTCTTCTTGAATGATTCAGTCAAGCGGTTTA 34
                                                **********************************

consensus_9694#0      ATGCTAGTGCAGTCACCGGAATTGATACCGATCTCAAAATGTTCGAGGCGTTTGGGGAGA 2160
consensus_9694#1      ATGCTAGTGCAGTCACCGGAATTGATACCGATCTCAAAATGTTCGAGGCGTTTGGGGAGA 94
                      ************************************************************

consensus_9694#0      GCATGTCCAGTTTGTTTGTGGACTCTGATCAAGAGTCTGCAGCAAATGAAATGAAGGCTG 2220
consensus_9694#1      GCATGTCCAGTTTGTTTGTGGACTCTGATCAAGAGTCTGCAGCAAATGAAATGAAGGCTG 154
                      ************************************************************

consensus_9694#0      CACTTGTGGAGGCGAGACAGCTAGTGAATCTTCTTATGAGCAACAGCCCAGAGAATTTCC 2280
consensus_9694#1      CACTTGTGGAGGCGAGACAGCTAGTGAATCTTCTTATGAGCAACAGCCCAGAGAATTTCC 214
                      ************************************************************

consensus_9694#0      TTAATCCAGTGATCCGTGAGAAGAGCTATAACAAGCTTGATTACAAAAAGGTGGCAGCCA 2340
consensus_9694#1      TTAATCCAGTGATCCGTGAGAAGAGCTATAACAAGCTTGATTACAAAAAGGTGGCAGCCA 274
                      ************************************************************

consensus_9694#0      TATCAGAGAAGTTTCGGGATTCCTCAGAGAGCTATTTCTCAACATTTGGAACTAGGGGTG 2400
consensus_9694#1      TATCAGAGAAGTTTCGGGATTCCTCAGAGAGCTATTTCTCAACATTTGGAACTAGGGGTG 334
                      ************************************************************

consensus_9694#0      CTAGGCAAAATCCGAAGAAGAAATCTCTTGATACTCTCATCAAAAGGCTCAGAGAAGCCA 2460
consensus_9694#1      CTAGGCAAAATCCGAAGAAGAAATCTCTTGATACTCTCATCAAAAGGCTCAGAGAAGCCA 394
                      ************************************************************

consensus_9694#0      GCTAGAGTTGCTAGTCCTCTCCTCTGCACCAGTTGCCCACAGTGCA-GAGCAAAGAAGGG 2519
consensus_9694#1      GCTAGAGTTGCTAGTCCTCTCCTCTGCAGTAAG-----ATAATATATGTTCTTTGCCTTT 449
                      ****************************  *       * * *  * *  *   *     

consensus_9694#0      AGAAGAGTAGAACCTGGAGGAAGAACAAGCAGAGGAGTAAGAAGAGCAGAGCAGGGGAAG 2579
consensus_9694#1      CACCTTCTCATGTTTTCAGTGTAATTTAGCCT--GCATTTGGTGTGCATTATTCATATTA 507
                             *      *  **    *   ***    *  *  *  * ***            

consensus_9694#0      AGGACAAAGAGTTAAAGAGAGGCAGATCGGCGCAGGGGGCAAAGAAGAGAAGAGCAGAGG 2639
consensus_9694#1      AAATCACCTTTTTCAATATACTGTAATTT-TGCTAATGTTAGAGT-GCCTGCTTCATATG 565
                      *   **     ** ** * *     **    **    *  * **  *       ** * *

consensus_9694#0      TGGAGGAGATAAGGAGATAACTGGGAGGTTCAGTGCTTTTCCCTCCAGATCTGGAGCAGG 2699
consensus_9694#1      TGTTGATATTGCAGTGTTAATTT-----TTTAA--CTCTTTACTGGAAATCAAGATAT-- 616
                      **  *    *   * * *** *      ** *   ** **  **  * ***  **     

consensus_9694#0      GAGGGTACGGTGGTCGACGAACGAGGCTGCAGGGGTCCTGTGGTGACTGGCTGGTTTGAG 2759
consensus_9694#1      ------------------------------------------------------------
                                                                                  

consensus_9694#0      GAACTTAGGAGACTGCCTGGTTGCCATGGTGAATTGGTGATGCCTTCATAAAATAGATGG 2819
consensus_9694#1      ------------------------------------------------------------
                                                                                  

consensus_9694#0      TATACTATATATTGCTTAACTACCCATATTCTGTAGTCTAACAGGGGTAATCTGTCCATC 2879
consensus_9694#1      ------------------------------------------------------------
                                                                                  

consensus_9694#0      GATAACTGCTTATAGTTATAGACTCATAGGACTGGTGTAGATGTTCTGAAGCTTATCATG 2939
consensus_9694#1      ------------------------------------------------------------
                                                                                  

consensus_9694#0      TGAATTGGGTAATTAACATTGCATGGTCATCAAGTCTCTCCTTAATATTTATTTGGACTA 2999
consensus_9694#1      ------------------------------------------------------------
                                                                                  

consensus_9694#0      AACAAATTTAGTTAGTTAAGACCTGCTA 3027
consensus_9694#1      ----------------------------
                                                  




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)