These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9699#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 2523 fasta sequence [ACCGCTCTTCTCCAATCTCCACACAGATGTCACTGCAACCTCCTCTCTATCTCTCTCTCTCTCTCTCTTGGTTTTCCGCTAATTAACCGCAGGGAGCGTGAGAAATTAAGTGATTGATTGAGAGATAGTAGTGGGGGTGGAAAAAGGAGGCGCCTTTAGTGGAAAAAGCTGCTCCTTTTTTCGCTTCTTCCTCCGCTCCCATTTCAATTTCGTGCGTGTGGCTTTCTCCTCTCCGCGTTTTGGTTTCCCGCGCGCGGAGGAGGG-AAAGATTTTGCCGTGTTCTTGCCGGCG----GCGAGCCGCCATGGAGGCGGCCGAATCCTTGGAGTATGAGCTGCAGAAGGAGGTCTCCAACATCATGATCCAGAGCTACATTACTAGCATGCGTCGAGAGTTCGAGACAAAGTTATGGGAGAATCAGAACTGCATTAGTACCTTGAACAAAAACTGGAAGGAAAAGATATCTAAGATTGCCGCACTGCGAGATGAACTCAGTACTATTTACAGTGTTGTATCAGCTTCAGAATCTGGTGTGTTTTCTTCTCATGGTAGTCACGAAAAGGTCGAAGAGCTCAACTTTTTGAAGATGAAGGATGATAACGAGTCATCAATCACAGAGAGAACTACAGATTCAGGTGAGCTCATGTTTGATATCCCGGACTTCTCACTCTTAAAGCACATGCCAAGTGAAGAAGTCACAAATTTTCTAAAATCAGAATGGCTGAAGTTGCGAAGACAGCACGAGTCTGAATTGCATGAGAAAACAGAAGAGTTGTTTAGGCTAAAAAGGGAATTTGCGAAAGATATAGCTTTGTTGCCTTCTAGGAAAGAGAGAGAACTTGAAATCATCAAATCAAAGTTGCTTCAAAGCATTTCAAAATTGGATGAAATCACCTTGAGAGAAGATAACCCTTATTGTGATAATTATGATGGTGCCGAGGTTTGCGGATTTGAGGACAGAATCGGCTCTTTACTTCATGAAAATGAACAACTACAAGGTTTGCTAGCTGACAAAAAAATGGTGGCTAAACATCTGTCTTTACAAGTATTAGATGCAGAGAGGAAAATGGCACAGCACTCGTTGTCCGAGTTAAAACTTGTGAAACAAGTTGAGAAGCTTAGCCATGAACTTGAAGATTTAAAGATTGAGAGCCACATTAAAGATTTATTGGAGCTGTCGACATTAAGAGAAGTTTTTGATAATTATGAGAATCATATTGATGATGCTAATCAGGAGGAGACCTTCCTCAGAGAGTTGCTTATAGAAAAAGAAGAGCAGTTGAGTATTATGTATGAAGACAGACAGAAGCTAAAGTATGAAAACAATCAACTTGTAGCAATTGCAGGATCAACATTAATGCAGCACCATGAGCAAGTCAACTTGGTTAATGACCTTACCAATTTTAGGGAGAAGGTGTGCGAGCAAGAGTTGTTGATCTTAGAGTCCAAGAGTGAGTCTAATTCAATGAAGAGTAGCTTGTATGAGGCTTTGCAGCAAATTAATGTATGCAAGCAAGAGATACATGGTCTGACTGACAACTTAACTGCCATGTCTATTGCTTTGGAGGAAGCCAAAGAACAGAATGCCTCACTTGATGCCACCATCCAGGAAATGAAGAAAACATCGGCGCCAAGCATTAACAGTCATAAGGGACAAGCAGGGCACCTAGAATATGCCCTTGTTAGTATGGAGAAGTTATCTAAATCATACAGCGATTTTGAAAGCAGATTGGCTCAAAGTATGAAGAGAAATGAAATTAGGTTGACTAATATAATTTGCCAGTTTAACCCACTGGTGCAGCAAGTTGCTGTATTAAAGAAAAAAGAATTCTGGTATAAACAGATACTCGAGATTAAATGCTCTAATCTCCAGAAAGCAGAAGCTGAGGTTGATATACTTGGGGATGAAGTTGATGCTCTTCTTAGTATTCTTGGGAAGATCTACATAGCACTTGATCATTATTCTCCTGTATTGAAGCATTATCCTGGGGTTACAGAGATTTTGAATCTGGTTCAGAAAGCATTGAAAGGAGAAAGTATTTAGTAGGATCAGGAAAAACCTTAACACTATTCATGAAAAGGCTTGACATGGATAGAATTATGACTGAGATTTTTCAATACTTCAGTTACCTGATTGCCGTAGGCA-AATTTTTTTTGCATTGTCTCACAGGGAAGAAAGATTAAGATCTTAACACACAAAGGCAAAGCATAGTAAACTAGCTAGCTACCATTGTTCCATTGATAGGGTTACCAACCGCATCTGTTGATTTATATGATTGTATCAGTGTTCAGTTAGTGGTGTTGTGAGTACAGTAGTACAGGCTTATAGGGTCTATTTGTATTGGTTGTAGTTTCAGGTTTCACTGTGAGTAGTTTACTTGTCTGCATGCAACAAAGTGCAGCTTGCTATAGTTATAGATGGTTTTGTCAGTGATCTTTTTTAGATGGCTTTGTAAAGATTCTTTGTGGAATGGAAGGCAGTAGGTAGGAGTTGTAATATCAGGTGGCTAATTAATGAAATCTGTG] [+] EMBL CB635011 [ACCGCTCTTCTCCAATCTCCACACAGATGTCACTGCAACCTCCTCTCTATCTCTCTCTCTCTCTCTCTTGGTTTTCCGCTAATTAACCGCAGGGAGCGTGAGAAATTAAGTGATTGATTGAGAGATAGTAGTGGGGGTGGAAAAAGGAGGCGCCTTTAGTGGAAAAAGCTGCTCCTTTTTTCGCTTCTTCCTCCGCTCCCATTTCAATTTCGTGCGTGTGGCTTTCTCCTCTCCGCGTTTTGGTTTCCCGCGCGCGGAGGAGGG AAAGATTTTGCCGTGTTCTTGCCGGCG GCGAGCCGCCATGGAGGCGGCCGAATCCTTGGAGTATGAGCTGCAGAAGGAGGTCTCCAACATCATGATCCAGAGCTACATTACTAGCATGCGTCGAGAGTTCGAGACAAAGTTATGGGAGAATCAGAACTGCATTAGTACCTTGAACAAAAACTGGAAGGAAAAGATATCTAAGATTGCCGCACTGCGAGATGAACTCAGTACTATTTACAGTGTTGTATCAGCTTCAGAATCTGGTGTGTTTTCTTCTCATGGTAGTCACGAAAAGGTCGAAGAGCTCAACTTTTTGAAGATGAAGGATGATAACGAGTCATCAATCACAGAGAGAACTACAGATTCAGATGAGCTCATGTTTGATATCCCGGACTTCTCACTCTTAAAGCACATGCCAAGTGAAGAAGTCACAAAATTTCTAAAATCAGAATGGCTGAAGTTGCGAAGACAGCACGAGTCTGAATTGCATGAGATAACAGAGGAGTTGTT ] [+] EMBL AK070162 [ TGGAAAAAGCTGCTCCTTTTTTCGCTTCTTCCTCCGCTCCCATTTCAATTTCGTGCGTGTGGCTTTCTCCTCTCCGCGTTTTGGTTTCCCGCGCGCGGAGGAGGG AAAGATTTTGCCGTGTTCTTGCCGGCG GCGAGCCGCCATGGAGGCGGCCGAATCCTTGGAGTATGAGCTGCAGAAGGAGGTCTCCAACATCATGATCCAGAGCTACATTACTAGCATGCGTCGAGAGTTCGAGACAAAGTTATGGGAGAATCAGAACTGCATTAGTACCTTGAACAAAAACTGGAAGGAAAAGATATCTAAGATTGCCGCACTGCGAGATGAACTCAGTACTATTTACAGTGTTGTATCAGCTTCAGAATCTGGTGTGTTTTCTTCTCATGGTAGTCACGAAAAGGTCGAAGAGCTCAACTTTTTGAAGATGAAGGATGATAACGAGTCATCAATCACAGAGAGAACTACAGATTCAGGTGAGCTCATGTTTGATATCCCGGACTTCTCACTCTTAAAGCACATGCCAAGTGAAGAAGTCACAAATTTTCTAAAATCAGAATGGCTGAAGTTGCGAAGACAGCACGAGTCTGAATTGCATGAGAAAACAGAAGAGTTGTTTAGGCTAAAAAGGGAATTTGCGAAAGATATAGCTTTGTTGCCTTCTAGGAAAGAGAGAGAACTTGAAATCATCAAATCAAAGTTGCTTCAAAGCATTTCAAAATTGGATGAAATCACCTTGAGAGAAGATAACCCTTATTGTGATAATTATGATGGTGCCGAGGTTTGCGGATTTGAGGACAGAATCGGCTCTTTACTTCATGAAAATGAACAACTACAAGGTTTGCTAGCTGACAAAAAAATGGTGGCTAAACATCTGTCTTTACAAGTATTAGATGCAGAGAGGAAAATGGCACAGCACTCGTTGTCCGAGTTAAAACTTGTGAAACAAGTTGAGAAGCTTAGCCATGAACTTGAAGATTTAAAGATTGAGAGCCACATTAAAGATTTATTGGAGCTGTCGACATTAAGAGAAGTTTTTGATAATTATGAGAATCATATTGATGATGCTAATCAGGAGGAGACCTTCCTCAGAGAGTTGCTTATAGAAAAAGAAGAGCAGTTGAGTATTATGTATGAAGACAGACAGAAGCTAAAGTATGAAAACAATCAACTTGTAGCAATTGCAGGATCAACATTAATGCAGCACCATGAGCAAGTCAACTTGGTTAATGACCTTACCAATTTTAGGGAGAAGGTGTGCGAGCAAGAGTTGTTGATCTTAGAGTCCAAGAGTGAGTCTAATTCAATGAAGAGTAGCTTGTATGAGGCTTTGCAGCAAATTAATGTATGCAAGCAAGAGATACATGGTCTGACTGACAACTTAACTGCCATGTCTATTGCTTTGGAGGAAGCCAAAGAACAGAATGCCTCACTTGATGCCACCATCCAGGAAATGAAGAAAACATCGGCGCCAAGCATTAACAGTCATAAGGGACAAGCAGGGCACCTAGAATATGCCCTTGTTAGTATGGAGAAGTTATCTAAATCATACAGCGATTTTGAAAGCAGATTGGCTCAAAGTATGAAGAGAAATGAAATTAGGTTGACTAATATAATTTGCCAGTTTAACCCACTGGTGCAGCAAGTTGCTGTATTAAAGAAAAAAGAATTCTGGTATAAACAGATACTCGAGATTAAATGCTCTAATCTCCAGAAAGCAGAAGCTGAGGTTGATATACTTGGGGATGAAGTTGATGCTCTTCTTAGTATTCTTGGGAAGATCTACATAGCACTTGATCATTATTCTCCTGTATTGAAGCATTATCCTGGGGTTACAGAGATTTTGAATCTGGTTCAGAAAGCATTGAAAGGAGAAAGTATTTAGTAGGATCAGGAAAAACCTTAACACTATTCATGAAAAGGCTTGACATGGATAGAATTATGACTGAGATTTTTCAATACTTCAGTTACCTGATTGCCGTAGGCA AATTTTTTTTGCATTGTCTCACAGGGAAGAAAGATTAAGATCTTAACACACAAAGGCAAAGCATAGTAAACTAGCTAGCTACCATTGTTCCATTGATAGGGTTACCAACCGCATCTGTTGATTTATATGATTGTATCAGTGTTCAGTTAGTGGTGTTGTGAGTACAGTAGTACAGGCTTATAGGGTCTATTTGTATTGGTTGTAGTTTCAGGTTTCACTGTGAGTAGTTTACTTGTCTGCATGCAACAAAGTGCAGCTTGCTATAGTTATAGATGGTTTTGTCAGTGATCTTTTTTAGATGGCTTTGTAAAGATTCTTTGTGGAATGGAAGGCAGTAGGTAGGAGTTGTAATATCAGGTGGCTAATTAATGAAATCTGTG] [+] EMBL BF475219 [ CTCCCATTTCAATTTCGTGCGTGTGGCTTTCTCCTCTCCGCGTTTTGGTTTCCCGCGCGCGGAGAAGGGAAAAGATTTTGCCGTGTTCTTGCCGGCGGCGAGCGAGCCGCCATGGAGGCGGCCGAATCCTTGGAGTATGAGCTGCAGAAGGAGGTCTCCAACATCATGATCCAGAGCTACATTACTAGCATGCGTCGAGAGTTCGAGACAAAGTTATGGGAGAATCAGAA ] [+] EMBL BF475217 [ AGTGTTGTATCAGCTTCAGAATCTGGTGTGTTTTCTTCTCATGGTAGTCACGAAAAGGTCGAAGAGCTCAACTTTTTGAAGATGAAGGATGATAACGAGTCATCAATCACAGAGAGAATTACAGATTCAGGTGAGCTCATGCTTGATATCCCGGACTTCTCACTCTTAAAGCACATGCCAAGTGAAGAAGTCACAAATTTTCTAAAATCAGAATGGCTGAAGTTGCGAAGACAGCATGAATCTGAATTGCATGAGAAAACAGAAGAGTTGTTTAGGCTAAAAAGGGAATTTGCGAAAGATATAGCTTTGTTGCCTTCTAGGAAAGAGAGAGAACTTGAAATCATCAAATCAAAGTTGCCTCAAAGCATTTCAAAATTGGATGAAATCACCTCGAGAGAAGATAACCCTTATTGTGATAATTATGATGATGCCGAGGTTTGCGGATTTGAGGACAGAATCGGCTCTTTACTTCATGAAAATGAACAACTACAAGGTTTGCTAGCTGACAAAAAAATGGTGGCTAAACATCTGTCTTTACAAGTATTAGATGCAGAGAGGAAAATGGCACAGCACTCGTTGTCCGAGTTAAAACTTGTGAAACAAATTGAGAAGCTTA CCATGAACTTGAAGA ] [-] EMBL CB635012 [ AGATTGGCTCAAAGTATGAAGAGAAATGAAATTAGGTTGACTAATATAATTTGCCAGTTTAACCCACTGGTGCAGCAAGTTGCTGTATTAAAGAAAAAAGAATTCTGGTATAAACAGATACTCGAGATTAAATGCTCTAATCTCCAGAAAGCAGAAGCTGAGGTTGATATACTTGGGGATGAAGTTGATGCTCTTCTTAGTATTCTTGGGAAGATCTACATAGCACTTGATCATTATTCTCCTGTATTGAAGCATTATCCTGGGGTTACAGAGATTTTGAATCTGGTTCAGAAAGCATTGAAAGGAGAAAGTATTTAGTAGGATCAGGAAAAACCTTAACACTATTCATGAAAAGGCTTGACATGGATAGAATTATGACTGAGATTTTTCAATACTTCAGTTACCTGATTGCCGTAGGCA AATTTTTTTTGCATTGTCTCACAGGGAAGAAAGATTAAGATGTTAACACACAAAGGCAAAGCATAGTAAACTAGCTAGCTACCATTGTTCCATTGATAGGGTTACCAACCGCATCTGTTGATTTATATGATTGTATCAGTGTTCAGTTAGTGGTGTTGTGAGTACAGTAGTACAGGCTTATAGGGTCTATTTGTATTGGTTGTAGTTTCAGGTTTCACTGTGAGTAGTTTACTTGTCTGCATGCAACAAAGTGCAGCTTGGTATAGTTATAGATGGTTTTGTCAGTGATCTTTTTTAGATGGCTTTGTAAAGATTCTTTGTGGAATTGAAAGGAGTAGGTAGGAGT ] [+] EMBL CB680748 [ CGGAGGCATTATTTTTTTTGCATTGTCTCACAGGGAAGAAAGATTAAGATCTTAACACACAAAGGCAAAGCATAGTAAACTAGCTAGCTACCATTGTTCCATTGATAGGGTTACCAACCGCATCTGTTGATTTATATGATTGTATCAGTGTTCAGTTAGTGGTGTTGTGAGTACAGTAGTACAGGCTTATAAGGTCTATTTGTATTGGTTGTAGTTTCAGGTTTCACTGTGAGTAGTTTACTTGGCTGCATGCAACAAAGTGCAGCTTGCTATAGTTATAGATGGTTTTGTCAGTGATCTTTTTTAGATGGCTTTGTAAAGATTCTTTGTGGAATGGAAGGCAGTAGGTAGGAGTTGTAATATCAGGTGGCTAATTAATGAAATCTGTG] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||