These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9702#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1566 fasta sequence [CCATCCACCCGCACCCTCCCAATTCTTCCCACGAAAACCTCCCAAATTCCGTAGCCGATCTCTCCCCCCCACCGGCGGCCGCCGCCGATGGAGACCTAACGCCGGATCGATCTCTCCCACCGGCCCGAGGCGGGTGAGGCAGGGCGCGTCGCCTCCATGGAGACCGAGCGGATCCGTCACCTCCTCCTCCTCACGCTCCGCGCGCCGCACGCCCGCCTCGCCCTCGTGGGTGGCAACCACACCGCCGCCCGCTTCTGCACCCGCTAATCCCCCCCTCCCTCGCCGGAAGACTCATCATCCTCTTCGTCTTCGCCACCGTCTCTGTGCGGTATAGCTCTCTCTCTCGCTCGCTCGCTCAGATGCCGGACGGCTGCGTGGTGATCCGGCTCCCGGACCCGCGCGTCCTCCGCGTGATCGCGCGCTCGGTGCTCCTCGCCGTCGCGCTGCTCTCCCTGGCCTGGCTCCGCGATGCCGAGGCCCCCGCCGGGGACGCGCTCCAGGTGGGGCTCCTGCTCCGCGACCTCCGCCGCGAGGGCCTGCTCGCCCCCGGCGCGCGCGCCGTCTTCCTCGGCGCCGCCGATGGAGACTGCCACCACCACCCTCCCGCCCTCGACGGCGACGACATGCGACGCATCACGCCGCGGGAGTTGCTGACGACGGGGGACCTGTCCGTCGACTTCGTGCTGGATTTCGGCTACTTCGACAAGGACGGCGACAGGGTTGGCCTCGTCGACAGGGTGCTCAAGGATGGCGGCATCTTTGCCGCCCCAATTGGCTCGGCGAGCGAGTTCCGCTTGCCGCCGAACTACCGCGTGGTTTACATCCGTCGGTTCACCGAGACTTTCGTCGGGATCAAGAAGATTGCCCGCGTCGGCGGCGACAATGGGATTGCCGGCGCCAGAACAGGGATGGCAGCGACGACTCCTGCTCTGAAGGAAGGAGTTCTTGCGTTTTCTGCTCAAACAGCTGACACTGCCCTCGCTGAACTCAAGAACTTCAGGAGGAAGCTCTTACTGCCTCACATCACTGGAGCATCAGCGGCTCACGCGCATCAAGCGTGGCTAAAATTGCGTCATCGTCCAGTGATTGCAGTTGATTTCCCAGCAATGTGGAATGTGAATAAGCTGCAGCCAGCACATCCTCTCGTCCTTCAGGATAAGGCTGTTCATGGAGCGCAACAGCAGCAGCTCAACAGGAGCGTGAGACTGAACCCATCTACAGGATATTGAAACGAAGCCTGAATTGGAACAGGGAAAAAGCTCAACTGAAGAAGAGCATTCTTGTCCATTGCAAATCCAGGGGGGTGATGCTCTCTGCCTGCCAAAAGAAATGGTTGGTTTGCTTTTTTCTGAAGTTCTTTATTTAAGTTGTCTGTCGTGCGTGATGATTGAGTTTGATGGTGTGCTACTGCTTACCAGTATGTGTGTATGCTTCGTTCGATAGTCTCCAATTTGTTGTTTTGTATTCAGTGGTGACTGGTGATCTACTGATCTCCAATTGCACTACTGTATGGTATCCGTTTGGAATGAGCATTGTTCGTCTTGATCAAAAAAAAAAAAAAAAAGA] [+] EMBL AK069088 [CCATCCACCCGCACCCTCCCAATTCTTCCCACGAAAACCTCCCAAATTCCGTAGCCGATCTCTCCCCCCCACCGGCGGCCGCCGCCGATGGAGACCTAACGCCGGATCGATCTCTCCCACCGGCCCGAGGCGGGTGAGGCAGGGCGCGTCGCCTCCATGGAGACCGAGCGGATCCGTCACCTCCTCCTCCTCACGCTCCGCGCGCCGCACGCCCGCCTCGCCCTCGTGGGTGGCAACCACACCGCCGCCCGCTTCTGCACCCGCTAATCCCCCCCTCCCTCGCCGGAAGACTCATCATCCTCTTCGTCTTCGCCACCGTCTCTGTGCGGTATAGCTCTCTCTCTCGCTCGCTCGCTCAGATGCCGGACGGCTGCGTGGTGATCCGGCTCCCGGACCCGCGCGTCCTCCGCGTGATCGCGCGCTCGGTGCTCCTCGCCGTCGCGCTGCTCTCCCTGGCCTGGCTCCGCGATGCCGAGGCCCCCGCCGGGGACGCGCTCCAGGTGGGGCTCCTGCTCCGCGACCTCCGCCGCGAGGGCCTGCTCGCCCCCGGCGCGCGCGCCGTCTTCCTCGGCGCCGCCGATGGAGACTGCCACCACCACCCTCCCGCCCTCGACGGCGACGACATGCGACGCATCACGCCGCGGGAGTTGCTGACGACGGGGGACCTGTCCGTCGACTTCGTGCTGGATTTCGGCTACTTCGACAAGGACGGCGACAGGGTTGGCCTCGTCGACAGGGTGCTCAAGGATGGCGGCATCTTTGCCGCCCCAATTGGCTCGGCGAGCGAGTTCCGCTTGCCGCCGAACTACCGCGTGGTTTACATCCGTCGGTTCACCGAGACTTTCGTCGGGATCAAGAAGATTGCCCGCGTCGGCGGCGACAATGGGATTGCCGGCGCCAGAACAGGGATGGCAGCGACGACTCCTGCTCTGAAGGAAGGAGTTCTTGCGTTTTCTGCTCAAACAGCTGACACTGCCCTCGCTGAACTCAAGAACTTCAGGAGGAAGCTCTTACTGCCTCACATCACTGGAGCATCAGCGGCTCACGCGCATCAAGCGTGGCTAAAATTGCGTCATCGTCCAGTGATTGCAGTTGATTTCCCAGCAATGTGGAATGTGAATAAGCTGCAGCCAGCACATCCTCTCGTCCTTCAGGATAAGGCTGTTCATGGAGCGCAACAGCAGCAGCTCAACAGGAGCGTGAGACTGAACCCATCTACAGGATATTGAAACGAAGCCTGAATTGGAACAGGGAAAAAGCTCAACTGAAGAAGAGCATTCTTGTCCATTGCAAATCCAGGGGGGTGATGCTCTCTGCCTGCCAAAAGAAATGGTTGGGTTGCTTTTTTCTGAAGTTCTTTATTTAAGTTGTCTGTCGTGCGTGATGATTGAGTTTGATGGTGTGCTACTGCTTACCAGTATGTGTGTATGCTTCGTTCGATAGTCTCCAATTTGTTGTTTTGTATTCAGTGGTGACTGGTGATCTACTGATCTCCAATTGCACTACTGTATGGTATCCGTTTGGAATGAGCATTGTTCGT ] [+] EMBL CB661599 [ CCCACGAAAACCTCCCAAATTCCGTAGCCGATCTCTCCCCCCCACCGGCGGCCGCCGCCGATGGAGACCTAACGCCGGATCGATCTCTCCCACCGGCCCGAGGCGGGTGAGGCAGGGCGCGTCGCCTCCATGGAGACCGAGCGGATCCGTCACCTCCTCCTCCTCACGCTCCGCGCGCCGCACGCCCGCCTCGCCCTCGTGGGTGGCAACCACACCGCCGCCCGCTTCTGCACCCGCTAATCCCCCCCTCCCTCGCCGGAAGACTCATCATCCTCTTCGTCTTCGCCACCGTCTCTGTGCGGTATAGCTCTCTCTCTCGCTCGCTCGCTCAGATGCCGGACGGCTGCGTGGTGATCCGGCTCCCGGACCCGCGCGTCCTCCGCGTGATCGCGCGCTCGGTGCTCCTCGCCGTCGCGCTGCTCTCCCTGGCCTGGCTCCGCGATGCCGAGGCCCCCGCCGGGGACGCGCTCCAGGTGGGGCTCCTGCTCCGCGACCTCCGCCGCGAGGGCCTGCTCGCCCCCGGTGCGCGCGCCGTCTTCCTCGGCGCCGCCGATGGAGACTGCCACCACCACCCTCCCGCCCTCGACGGCGACGACATGCGACGCATCACGCCGCGGGAGTTGCTGACGACGGGGGACCTGTCCGTCGACTTCGTGCTGGATT ] [+] EMBL CB625695 [ ATCATCCCCTTCGTCTTCGCCACCGTCTCTGTGCGGTATAGCTCTCTCTCTCGCTCGCTCGCTCAGATGCCGGACGGCTGCGTGGTGATCCGGCTCCCGGACCCGCGCGTCCTCCGCGTGATCGCGCGCTCGGTGCTCCTCGCCGTCGCGCTGCTCTCCCTGGCCTGGCTCCGCGATGCCGAGGCCCCCGCCGGGGACGCGCTCCAGGTGGGGCTCCTGCTCCGCGACCTCCGCCGCGAGGGCCTGCTCGCCCCCGGCGCGCGCGCCGTCTTCCTCGGCGCCGCCGATGGAGACTGCCACCACCACCCTCCCGCCCTCGACGGCGACGACATGCGACGCATCATGCCGCGGGAGTTGCTGACGACGGGGGACCTGTCCGTCGACTTTGTGCTGGATTTCGGCTACTTCGACAAGGACGGCGACAGGGTTGGCCTCGTCGACAGGGTGCTCAAGGATGGCGGCATCTTTGCCGCCCCAATTGGCTCGGCGAGCGCGTTCCGCTTGCCGCCGAACTACCGCGTGGTTTACATCCGTCGGTTCACCGAGACTTTCGTCGGGATCAAGAAGATTGCCCGCGTCGGCGGCGACAATGGGATTGCCGGCGCCAGAACAGGGATGGCAGCGACGACTCCTGCTCTGAAGGAAGGAGTTCTTGCGTTTTCTGCTCAAACAGCTGACACTGCCCTCGCTGAACTCAAGAACTTCAGGAGGAAGCTCTTACTGCCTCACATCACTGGAGCATCAGCGGCTCACGCGCATC ] [+] EMBL CA997834 [ TCGGCTACTTCGACAAGGACGGCGACAGGGTTGGCCTCGTCGACAGGGTGCTCAAGGATGGCGGCATCTTTGCCGCCCCAATTGGCTCGGCGAGCGAGTTCCGCTTGCCGCCGAACTACCGCGTGGTTTACATCCGTCGGTTCACCGAGACTTTCGTCGGGATCAAGAAGATTGCCCGCGTCGGCGGCGACAATGGGATTGCCGGCGCCAGAACAGGGATGGCAGCGACGACTCCTGCTCTGAAGGAAGGAGTTCTTGCGTTTTCTGCTCAAACAGCTGACACTGCCCTCGCTGAACTCAAGAACTTCAGGAGGAAGCTCTTACTGCCTCACATCACTGGAGCATCAGCGGCTCACGCGCATCAAGCGTGGCTAAAATTGCGTCATCGTCCAGTGATTGCAGTTGATTTCCCAGCAATGTGGAATGTGAATAAGCTGCAGCCAGCACATCCTCTCGTCCTTCAGGATAAGGCTGTTCATGGAGCGCAACAGCAGCAGCTCAACAGGAGCGTGAGACTGAACCCATCTACAGGATATTGAAACGAAGCCTGAATTGGAACAGGGAAAAAGCTCAACTGAAGAAGAGCATTCTTGTCCATTGCAAATCCAGGGGGGTGATGCTCTCTGCCTGCCCAAAGAAATGGTTGGTTTGCTTTTTTCTGAAGTTCTTTATTTAAGTTGTCTGTCGTGCGTGATGATTG ] [-] EMBL CB661600 [ TCGGTTCACCGAGACTTTCGTCGGGATCAAGAAGATTGCCCGCGTCGGCGGCGACAATGGGATTGCCGGCGCCAGAACAGGGATGGCAGCGACGACTCCTGCTCTGAAGGAAGGAGTTCTTGCGTTTTCTGCTCAAACAGCTGACACTGCCCTCGCTGAACTCAAGAACTTCAGGAGGAAGCTCTTACTGCCTCACATCACTGGAGCATCAGCGGCTCACGCGCATCAAGCGTGGCTAAAATTGCGTCATCGTCCAGTGATTGCAGTTGATTTCCCAGCAATGTGGAATGTGAATAAGCTGCAGCCAGCACATCCTCTCGTCCTTCAGGATAAGGCTGTTCATGGAGCGCAACAGCAGCAGCTCAACAGGAGCGTGAGACTGAACCCATCTACAGGATATTGAAACGAAGCCTGAATTGGAACAGGGAAAAAGCTCAACTGAAGAAGAGCATTCTTGTCCATTGCAAATCCAGGGGGGTGATGCTCTCTGCCTGCCAAAAGAAATGGTTGGTTTGCTTTTTTCTGAAGTTCTTTATTTAAGTTGTCTGTCGTGCGTGATGATTGAGTTTGATGGTGTGCTACTGCTTACCAGTATGTGTGTATGCTTCGTTCGATAGTCTCCAATTTGTTGTTTTGTATTCAGTGGTGACTGGTGATCTACTGATCTCCAATTGCACTACTGTATGGTATCCGTTTGGAATGAGCATTGTTCGTCTTGATCAAAAAAAAAAAAAAAAAGA] [-] EMBL CB625696 [ TTGCCCGCGTCGGCGGCGACAATGGGATTGCCGGCGCCAGAACAGGGATGGCAGCGACGACTCCTGCTTTGAAGGAAGGAGTTCTTGCGTTTTTTGCTCAAACAGTTGACACTGCCCTCGCTGAACTCAAGAACTTCAGGAGGAAGCTCTTACTGCCTCACATCACTGGAGCATCAGCGGCTCACGCGCATCAAGGGTGGCTAAAATTGCGTCATCGTCCAGTGATTGCAGTTGATTTCCCAGCAATGTGGAATGTGAATAAGCTGCAGCCAGCACATCCTTTCGTCCTTCAGGATAAGGCTGTTCATGGAGCGCAACAGCAGCAGCTCAACAGGAGCGTGAGACTGAACCCATTTCCAGGATATTGAAACGAACCCTGAATTGGAACAGGGAAAAAGCTCAACTGAAGAAGAGCATTTTTGTCCATTGCAAATCCAGGGGGGTGATGCTCTCTCCCTGCCAAAAGAAATGGTTGGTTTGCTTGTTTCTGAAGTTCTTTATTTAAGTTGTCTGTCGTGCGTGATGATTGAGTTTGATGGTGTGTTACTGCTTACCAGTATGTGTGTATGCTTCGTTCGATAGTCTCCAATTTGTTGTTTGGTATTCAGTGGTGACTGGTGATTTACTGATCTCCAATTGCACTACTGTATGGTATCCGTTTGGAATGATCAAGGGTCTTC ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||